Metagenome Family F102972

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102972
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	113 residues
Representative Sequence	DRKTQAPIFEATPQGHLVRSKDERTLHLMQKVQPGFGSQNWAFGGFDPLTAEPLKLQLPGDCLLCHQAALVSDMAFSLNLLKRFAATGSVQYSFCLQPGRQPCPFQ
Number of Associated Samples	90
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.98 %
% of genes near scaffold ends (potentially truncated)	97.03 %
% of genes from short scaffolds (< 2000 bps)	89.11 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (11.881 % of family members)
Environment Ontology (ENVO)	Unclassified (29.703 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.535 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.91% β-sheet: 7.46% Coil/Unstructured: 74.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF15902	Sortilin-Vps10	8.91
PF04392	ABC_sub_bind	7.92
PF00072	Response_reg	4.95
PF02518	HATPase_c	4.95
PF03171	2OG-FeII_Oxy	3.96
PF13635	DUF4143	1.98
PF13738	Pyr_redox_3	1.98
PF00561	Abhydrolase_1	0.99
PF00941	FAD_binding_5	0.99
PF13492	GAF_3	0.99
PF07883	Cupin_2	0.99
PF02012	BNR	0.99
PF01923	Cob_adeno_trans	0.99
PF01252	Peptidase_A8	0.99
PF13450	NAD_binding_8	0.99
PF07969	Amidohydro_3	0.99
PF00528	BPD_transp_1	0.99
PF05567	Neisseria_PilC	0.99
PF08028	Acyl-CoA_dh_2	0.99
PF13847	Methyltransf_31	0.99
PF14226	DIOX_N	0.99
PF00496	SBP_bac_5	0.99
PF01152	Bac_globin	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	7.92
COG0597	Lipoprotein signal peptidase	Cell wall/membrane/envelope biogenesis [M]	1.98
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.99
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	39.60 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.93 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	39.60 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	6.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.98 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	39.60 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	6.93 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	39.60 %
Thermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales	6.93 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.99 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	39.60 %
Thermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	6.93 %
Methylocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella	0.99 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	39.60 %
Calidithermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus	5.94 %
Methylocella silvestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	0.99 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	39.60 %
Calidithermus chliarophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus → Calidithermus chliarophilus	5.94 %
Methylocella silvestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	0.99 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.99 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_101177054	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	557	Open in IMG/M
3300004268\|Ga0066398_10064190	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300004463\|Ga0063356_100405954	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300004479\|Ga0062595_100006640	All Organisms → cellular organisms → Bacteria	3449	Open in IMG/M
3300004633\|Ga0066395_10003556	All Organisms → cellular organisms → Bacteria → Proteobacteria	5389	Open in IMG/M
3300005180\|Ga0066685_10002882	All Organisms → cellular organisms → Bacteria → Proteobacteria	8184	Open in IMG/M
3300005330\|Ga0070690_101041372	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300005332\|Ga0066388_100717205	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300005332\|Ga0066388_105323098	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	653	Open in IMG/M
3300005347\|Ga0070668_100849916	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005367\|Ga0070667_101246885	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300005446\|Ga0066686_10950918	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005536\|Ga0070697_100361759	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1254	Open in IMG/M
3300005544\|Ga0070686_101880927	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300005552\|Ga0066701_10130761	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1496	Open in IMG/M
3300005556\|Ga0066707_10706986	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	631	Open in IMG/M
3300005616\|Ga0068852_101183196	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005713\|Ga0066905_101168896	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005713\|Ga0066905_102153060	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005764\|Ga0066903_108741421	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005764\|Ga0066903_109166023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus → Calidithermus chliarophilus	500	Open in IMG/M
3300005842\|Ga0068858_100253241	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300006034\|Ga0066656_11133242	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300006794\|Ga0066658_10036588	All Organisms → cellular organisms → Bacteria → Proteobacteria	2032	Open in IMG/M
3300006854\|Ga0075425_100820805	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300006914\|Ga0075436_100789824	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300006969\|Ga0075419_11120396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	577	Open in IMG/M
3300009038\|Ga0099829_10646766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus → Calidithermus chliarophilus	879	Open in IMG/M
3300009090\|Ga0099827_10300918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	1357	Open in IMG/M
3300009098\|Ga0105245_11244516	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	793	Open in IMG/M
3300009100\|Ga0075418_10176600	All Organisms → cellular organisms → Bacteria	2274	Open in IMG/M
3300009174\|Ga0105241_12281636	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300009176\|Ga0105242_12277639	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300009792\|Ga0126374_10956260	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	668	Open in IMG/M
3300010043\|Ga0126380_10333603	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1096	Open in IMG/M
3300010043\|Ga0126380_11214934	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300010304\|Ga0134088_10681044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus → Calidithermus chliarophilus	515	Open in IMG/M
3300010358\|Ga0126370_10281244	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1308	Open in IMG/M
3300010359\|Ga0126376_11037005	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	823	Open in IMG/M
3300010359\|Ga0126376_11140490	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300010359\|Ga0126376_11518308	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300010359\|Ga0126376_13176520	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300010360\|Ga0126372_12638183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus → Calidithermus chliarophilus	554	Open in IMG/M
3300010366\|Ga0126379_12658075	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	598	Open in IMG/M
3300010376\|Ga0126381_104458202	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300010398\|Ga0126383_10199104	All Organisms → cellular organisms → Bacteria → Proteobacteria	1921	Open in IMG/M
3300010399\|Ga0134127_13085143	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300010868\|Ga0124844_1311682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus → Calidithermus chliarophilus	525	Open in IMG/M
3300012203\|Ga0137399_10562016	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	958	Open in IMG/M
3300012203\|Ga0137399_11199768	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300012361\|Ga0137360_11389923	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	605	Open in IMG/M
3300012929\|Ga0137404_10071602	All Organisms → cellular organisms → Bacteria	2723	Open in IMG/M
3300012930\|Ga0137407_10684241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	966	Open in IMG/M
3300013297\|Ga0157378_10890648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	920	Open in IMG/M
3300013306\|Ga0163162_11087875	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	906	Open in IMG/M
3300015264\|Ga0137403_10129107	All Organisms → cellular organisms → Bacteria	2512	Open in IMG/M
3300015372\|Ga0132256_100893800	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300015372\|Ga0132256_102136481	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300015374\|Ga0132255_100373848	All Organisms → cellular organisms → Bacteria	2069	Open in IMG/M
3300016422\|Ga0182039_11391224	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300016422\|Ga0182039_11807536	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	560	Open in IMG/M
3300017959\|Ga0187779_10848708	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300017994\|Ga0187822_10002587	All Organisms → cellular organisms → Bacteria	3781	Open in IMG/M
3300018054\|Ga0184621_10284710	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300018076\|Ga0184609_10427818	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300018431\|Ga0066655_10316358	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1019	Open in IMG/M
3300019879\|Ga0193723_1185863	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300019881\|Ga0193707_1088327	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	941	Open in IMG/M
3300022534\|Ga0224452_1144038	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	734	Open in IMG/M
3300024317\|Ga0247660_1067954	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300025910\|Ga0207684_10468204	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300025930\|Ga0207701_11360505	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300025934\|Ga0207686_11293150	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300025940\|Ga0207691_10191459	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300026332\|Ga0209803_1086608	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1302	Open in IMG/M
3300026359\|Ga0257163_1036060	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300026536\|Ga0209058_1108586	All Organisms → cellular organisms → Bacteria → Proteobacteria	1389	Open in IMG/M
3300026537\|Ga0209157_1373102	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300026547\|Ga0209156_10037599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2674	Open in IMG/M
3300026550\|Ga0209474_10702433	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300027645\|Ga0209117_1022414	All Organisms → cellular organisms → Bacteria	2028	Open in IMG/M
3300027646\|Ga0209466_1078619	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	666	Open in IMG/M
3300027821\|Ga0209811_10172074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	811	Open in IMG/M
3300027846\|Ga0209180_10763610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus → Calidithermus chliarophilus	520	Open in IMG/M
3300027882\|Ga0209590_10914000	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300028793\|Ga0307299_10318917	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10070113	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300031720\|Ga0307469_10411452	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1158	Open in IMG/M
3300031740\|Ga0307468_100218815	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300031740\|Ga0307468_102097463	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300031744\|Ga0306918_10198166	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300031770\|Ga0318521_10158168	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1290	Open in IMG/M
3300031793\|Ga0318548_10123592	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1252	Open in IMG/M
3300031819\|Ga0318568_10111138	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1649	Open in IMG/M
3300031833\|Ga0310917_10250947	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1191	Open in IMG/M
3300031835\|Ga0318517_10288526	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	741	Open in IMG/M
3300031897\|Ga0318520_10242867	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1073	Open in IMG/M
3300032174\|Ga0307470_10182310	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300032180\|Ga0307471_103436563	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300032205\|Ga0307472_100582372	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	984	Open in IMG/M
3300033500\|Ga0326730_1108835	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.19%
Host-Associated	Host-Associated	18.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.23%
Plants	Host-Associated → Plants	18.81%
Aquatic	Environmental → Aquatic	3.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.95%
Sediment	Environmental → Aquatic → Sediment	2.97%
Freshwater	Environmental → Aquatic → Freshwater	0.99%
Peat	Environmental → Terrestrial → Peat	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.42%
Loam	Environmental → Terrestrial → Soil → Loam	15.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%
Sand	Environmental → Terrestrial → Soil → Sand	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.97%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.99%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.99%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1011770542	3300000559	Soil	PAGVLFALDVYSAKLVSRDRKTGAPRFEVTAQGHLARSKDERTLHLMQKIQPGFGSQNWVFGGFDPISAEPLKLQLPGDCHLCHQAAVVTDMTYSMKLLKRFVASGVVQYNFCPQPGRQACPFP*
Ga0066398_100641901	3300004268	Tropical Forest Soil	DKTGAPVFEASRDGHLVPSKDERTLHLMQKIQPGFGSQNWAFGGFDPVSAEPLKLELPGDCLLCHQAAVVRDMAFSLSLLKTFIATGTVQYRFCRQPGRQVCAF*
Ga0063356_1004059541	3300004463	Arabidopsis Thaliana Rhizosphere	LSELPVGALFALDVYSARMIRRDPRTGASVFEKSPDGHLVRSKDEHTLHLMQKTRAGFGSRTWSFGGFDPATALPLKLDLPGDCLLCHQAALVSDLSFSLTLLRRYVATGQVQYGFCAQPGRQICPF*
Ga0062595_1000066403	3300004479	Soil	LSELPVGALFALDVYSARMIRRDPRTGASVFEKSPDGHLVRSKDEHTLHLMQKTRAGFGSRTWTFGGFDPATALPLKLDLPGDCLLCHQAALVSDLSFSLTLLRRYVATGQVQYGFCAQPGRQICPF*
Ga0066395_100035565	3300004633	Tropical Forest Soil	GRLVRSKNERTLHLMEKVRPGFGSHNWAFGGFDPVTAEPLKLDLPGDCLLCHQAAVMSEMTFSLNLLRRFVTSGSVQYRLCQQPGRQPCPFQ*
Ga0066685_100028821	3300005180	Soil	AGVLFALAVHGARAIGRDAKTGAPLFEVTPQGRLVRSKHERTLHLMQKVRPGFGSQNWAFGGFDPTTAEPLKLQLPGDCHLCHQAAVMSDMTFSLNLLKHFVSSGTVQYSLCRQPGRQPCPFQ*
Ga0070690_1010413721	3300005330	Switchgrass Rhizosphere	AVQRDPGLSELPVGALFALDVYSARMIRRDPRTGASVFEKSPDGHLVRSKDEHTLHLMQKTRAGFGSRTWSFGGFDPATALPLKLDLPGDCLLCHQAALVSDLSFSLTLLRRYVATGQVQYGFCAQPGRQICPF*
Ga0066388_1007172051	3300005332	Tropical Forest Soil	TGHDKTGAPVFEASRDGHLVPSKDERTLHLMQKIQPGFGSQNWAFGGFDPVGAQALKLELPGDCLLCHQAAVVRDMAFSLSLLKTFIATGTVQYRFCRQPGRQVCAF*
Ga0066388_1053230982	3300005332	Tropical Forest Soil	ALFALDVHSAKRLGQDRKTKAPIFETGRDSHLVRSRDERILHVMRKTQPGFGSQNWTFGGFDPLTAGPLKLQLPGDCLYCHQAALVSDMAFSMNLLKRFVTTGAVQYSFCTHPGRQSCPF
Ga0070668_1008499161	3300005347	Switchgrass Rhizosphere	LVRSKDEHTLHLMQKTRAGFGSRTWSFGGFDPATALPLKLDLPGDCLLCHQAALVSDLSFSLTLLRRYVATGQVQYGFCAQPGRQICPF*
Ga0070667_1012468852	3300005367	Switchgrass Rhizosphere	RRDPRTGASVFEKSPDGHLVRSKDEHTLHLMQKTRAGFGSRTWSFGGFDPATALPLKLDLPGDCLLCHQAALVSDLSFSLTLLRRYVATGQVQYGFCAQPGRQICPF*
Ga0066686_109509182	3300005446	Soil	ARLVGRDPKTRAPRFEVTPQGHLVRSKDERTLHLMQKVQPGFGSQNWAFGGFDPVTAKPLKLQLPGDCLLCHQAAMMSDMAFSMNLLKHFVTSGAVQYSFCPQPWATIVSVSMTGAAPSPPPVFMALLAP*
Ga0070697_1003617592	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MYSARLVGRDRKTQASIFEATPQGHLVRSKDERTLHLMQKVQPGFGSQNWAFGGFDPLTAEPLKLQLPGDCLLCHQAALVSDMAFSLNLLKRFAATGSVQYRFCSQPGRQPCPFQ*
Ga0070686_1018809272	3300005544	Switchgrass Rhizosphere	TAQGHLVRSKDERTLHLMQKVRPGFGSQNWAFGGFDPITAEPLKLQLPGDCHLCHQAAVVSDMTYSMKLLRRFAESGVLQYSFCPQPGRQACPFP*
Ga0066701_101307611	3300005552	Soil	IFEATPQGHLVRSKDERTLHLMQKVQPGFGSQNWAFGGFDPLTAEPLKLQLPGDCLLCHQAALVSDMAFSLNLLKRFAATGSVQYSFCLQPGRQPCPFQ*
Ga0066707_107069861	3300005556	Soil	LVRSKDERTLHLMQKVQPGFGSQNWAFGGFDPLTAEPLKLQLPGDCLLCHQAALVSDMAFSLNLLKRFAATGSVQYSFCLQPGRQPCPFQ*
Ga0068852_1011831962	3300005616	Corn Rhizosphere	EFPVGALFALDVYSARMIRRDPRTGASVFEKSPDGHLVRSKDEHTLHLMQKTRAGFGSRTWTFGGFDPATALPLKLDLPGDCLLCHQAALVSDLSFSLTLLRRYVATGQVQYGFCAQPGRQICPF*
Ga0066905_1011688961	3300005713	Tropical Forest Soil	AVDALKHDPRLKEFPAGILFALDVHSARTVGLEAKTGAPRFEVTREGRLVRSKDERTLHLMEKIRPGFGSQNWAFGGFDPVTAEPLKLQLPGDCLLCHQAAVTSEMTFSLNLLKRFAASGSVQYRLCQQPGRQPCPFQ*
Ga0066905_1021530601	3300005713	Tropical Forest Soil	LFALDVHSARTVGLEAKTGAPRFEVTPQGRLVRSKDERTLHLMKKVQPGFGSQNWAFAGFDPVTAEPLKLELPGDCLLCHQAALTSEMAFSLNLLRRFSASGIVQYRLCQQPGRQPCPFQ
Ga0066903_1087414211	3300005764	Tropical Forest Soil	DAIDALRRDPRLHEFPAGVLFALDVHSARVVGRDPKTRAPIFEATADGHLVRSKDERTLHLMRKIQPGFGSQNWAFGGFDPVTAAPLKLQLPGDCLLCHQAAVVSDMAFSLALLKRFTATGALQYSFCAQPGRQSCPF*
Ga0066903_1091660231	3300005764	Tropical Forest Soil	VLFALDVHSARTVGLEPKTGAPRFEVTREGRLVRSKNERTLHLMEKVRPGFGSQNWAFGGFDPVTAEPLKLQLPGDCLLCHQAAVMSEMTFSLNLLKRFAASDSVQYRLCRQPGRQPCPFQ*
Ga0068858_1002532411	3300005842	Switchgrass Rhizosphere	ALFALDVYSARMIRRDPRTGASVFEKSPDGHLVRSKDEHTLHLMQKTRAGFGSRTWSFGGFDPATALPLKLDLPGDCLLCHQAALVSDLSFSLTLLRRYVATGQVQYGFCAQPGRQICPF
Ga0066656_111332421	3300006034	Soil	FPVGVLFALDVHSASDVGRDPTTRAPRFDVTPQGRLRRSKDERTLHLMEKVQPGFGSQNWAFGGFDPVTTEPLKLQLPGDCHLCHQAAVMSDMTFSMTLLKRFVTSGTVQYRLCQQPGRQPCPFQ*
Ga0066658_100365884	3300006794	Soil	VGVLFALDVHSASDVGRDPTTRAPRFDVTPQGRLRRGKDERTLHLMEKVQPGFGSQNWAFGGFDPVTAEPLKLQLPGDCHLCHQAAVMSDMTFSMTLLKRFVTSGTVQYRLCQQPGRQPCPFQ*
Ga0075425_1008208052	3300006854	Populus Rhizosphere	RKTQTPRFETASDGHLARSKDERTLHLMQKTQAGAGSQNWTFGGFDSLSGTPLKLDLPGDCLLCHQAALTSDMAFSMPLLKRFVTTGAVQYSFCRHPGRQACPFS*
Ga0075436_1007898241	3300006914	Populus Rhizosphere	RDPKTGAPRFETTAQGHLVRSKDERTLHLMQKIHPGFGSQNWVFGGFDPISTEPLKLQLPGDCHLCHQAAVVSDMTYSMKLLKRFVASGVVQYSFCPQPGRQACPFP*
Ga0075419_111203962	3300006969	Populus Rhizosphere	SVGALLALDVHSARQVGRDPKTRSPIYETDRQGHLVRSRDEHTLHLMQKTQPGFGSQTWTFAGYDPRTAAPLNLQLPGDCLLCHQAALVSDMGFSLSLLRRFTETGEVQYSFCAQPGRQSCRF*
Ga0099829_106467662	3300009038	Vadose Zone Soil	VGRDPKTRAPRFEVTPQGHLVRGKDERTLHLMQKVQPGFGSQNWAFGGFDPVTAKPLKLQLPGDCLLCHQAAMMSDMAFSMNLLKHFVTSGAVQYSFCPQPGRQSCPFQ*
Ga0099827_103009181	3300009090	Vadose Zone Soil	KTRTPRFEVTPQGHLVRSKDEHTLHLMQKFQPGFGSQNWAFGGFNPVTSEPLKLQLPGDCHLCHQAAVVSDMAFSLNLLKRFVARGAVQYSFCPQPGRQSCPFQ*
Ga0105245_112445162	3300009098	Miscanthus Rhizosphere	LDVYSAKLMSRDPKTGTPRFEATAQGHLVRSKDERTLHLMQKVRPGFGSQNWAFGGFDPITAEPLKLQLPGDCHLCHQAAVVSDMTYSMKLLRRFAESGVLQYGFCPQPGRQACPFP*
Ga0075418_101766001	3300009100	Populus Rhizosphere	PVGALLALDVHSARQVGRDPKTRSPIYETDRQGHLVRSRDEHTLHLMQKTQPGFGSQTWTFAGYDPRTAAPLNLQLPGDCLLCHQAPLVSDMAFSLSLLRRFTETGEVQYSFCAQPGRQSCRF*
Ga0105241_122816362	3300009174	Corn Rhizosphere	ALDVYSAKLMSRDPKTGTPRFEATAQGHLVRSKDERTLHLMQKVRPGFGSQNWAFGGFDPITAEPLKLQLPGDCHLCHQAAVVSDMTYSMKLLRRFAESGVLQYSFCPQPGRQACPFP*
Ga0105242_122776392	3300009176	Miscanthus Rhizosphere	PVGVLFALDVHRAKLVARDHRTGAPTFASGPDGHLARSKDERTLHLMQKIRAGSGSQNWAFGGFDPVTGAPLKLELPGDCLLCHQAAVVSDMTFSLTLLKRFAESGAVQYRLCAQPGRQVCPF*
Ga0126374_109562601	3300009792	Tropical Forest Soil	QEFPVGALFALDVHTAKRLGQDKKTQTTIWETTRDGHLRRSHDERILHVMRKTQPGFGSQNWTFGGFDPVTAGPLKLQLPGDCLYCHQAALVSDMAFSLNLLKRFVASGAVQYSFCAHPGRQSCPF*
Ga0126380_103336031	3300010043	Tropical Forest Soil	EGRLVRSKDERTLHLMEKIRPGFGSQNWAFGGFDPVTAEPLKLQLPGDCLLCHQAAVTSEMTFSLNLLKRFVATSSVQYRFCQQPGRQPCPFE*
Ga0126380_112149341	3300010043	Tropical Forest Soil	DGHLVRGKSERTLHLMRKGQPGFGSQNWTFGGFDPVTAEPLRLQLPGDCLLCHQAAVTSDMSFSLSLLRRFVTTGAVQYSFCAQPGRQSCPF*
Ga0134088_106810441	3300010304	Grasslands Soil	LQEFPVGVLLALDVYSARLVGRDPKTRAPRFEVTPQGHLVRSKDERTLHLMQKVQPGFGSQNWAFGGFDPVTAKPLKLQLPGDCLLCHQAAMMSDMAFSMNLLKHFVTSGAVQYSFCPQPWATIVSVSMTGAAPSPPPVFMALLAP*
Ga0126370_102812441	3300010358	Tropical Forest Soil	RSKDEHVLHLMKKIRPGFGSQNWAFGGYDPATTAPLKLELPGDCFLCHQAAVMSDMTFSLNLLKRFASSGAVQYRLCSQPGRQPCPFQ*
Ga0126376_110370052	3300010359	Tropical Forest Soil	EPRFEMTAQGHLARSKDERILHLMRKTQSGFGSQNWVFGGFDPLTAEPLKLNLPGDCSLCHQAAVVSDMTFSMNLLRRFVASGAVQWSFCPQPGRQSCPFQ*
Ga0126376_111404902	3300010359	Tropical Forest Soil	VFEASRDGHLVPSKDERTLHLMQKIQPGFGSQNWAFGGFDPVSAEPLKLELPGDCLLCHQAAVVRDMAFSLSLLKTFIATGTVQYRFCRQPGRQVCAF*
Ga0126376_115183082	3300010359	Tropical Forest Soil	GLEAKTGAPRFEVTREGRLVRSKDERTLHLMEKIRPGFGSQNWAFGGFDPVTAEPLKLQLPGDCLLCHQAAVTSEMTFSLNLLKRFAASGSVQYRLCQQPGRQPCPFQ*
Ga0126376_131765202	3300010359	Tropical Forest Soil	GRDRKSGAPTFETTPGGRLVASIDERTLHLMLKTKPGFGSQNWVFGGFDPVTGQPLPLQLPGDCLLCHQAAVVSDMAFSLPLMKRFAASGAVQYRFCPHPGRQSCPF*
Ga0126372_126381831	3300010360	Tropical Forest Soil	HEFPAGVLFALDVHSARVVGRDPKTRAPIFEATADGHLVRSKDERTLHLMRKIQPGFGSQNWAFGGFDPVTAAPLKLQLPGDCLLCHQAALASDMTYSMTLMKRFVSTGVVQYSFCPHPGRQACAFH*
Ga0126379_126580752	3300010366	Tropical Forest Soil	RLVRSKDEHVLHLMQKIRPGFGSQNWAFGGFDPVTAEPLKLELPGDCFLCHQAAVVSDMTFSLNLLKRFASSGAVQYRLCAQPGRQPCPFQ*
Ga0126381_1044582021	3300010376	Tropical Forest Soil	LFALDVHSARTVGLEPKTGAPRFEVTREGRLVRSKNERTLHLMEKVRPGFGSHNWAFGGFDPVTAEPLKLDLPGDCLLCHQAAVMSEMTFSLNLLRRFVTSGSVQYRLCQQPGRQPCPFQ
Ga0126383_101991042	3300010398	Tropical Forest Soil	VSGRDPKTQAPRFEKDPEGHLVRSKDEHTLHLMAKTQAGLGSKNWTYGGYDPVTAVPLKLDLPGDCLLCHQAALASDMTYSMTLMKRFVSTGVMQYSFCPHPGRQACAFH*
Ga0134127_130851431	3300010399	Terrestrial Soil	PRFEATAQGHLVRSKDERTLHLMQKVRPGFGSQNWAFGGFDPITAEPLKLQLPGDCHLCHQAAVVSDMTYSMKLLRRFAESGVLQYSFCPQPGRQACPFP*
Ga0124844_13116821	3300010868	Tropical Forest Soil	HLVPSKDERTLHLMQKIRPGFGSQNWAFGGFDPVGAQALKLELPGDCLLCHQAAVVRDMAFSLSLLKTFIATGTVQYRFCRQPGRQVCAF*
Ga0137399_105620161	3300012203	Vadose Zone Soil	ARDGHLIRSKDERTLHLMRKIQPGSGSQNWAFGGFDPLTAEPLKLDLPGDCLLCHQAAVVSDMAFSMSLLKRFVETGAVQYSFCVHPGRQS*
Ga0137399_111997681	3300012203	Vadose Zone Soil	VPAGVLFALDVHSAREIGRDAKIHAPRFEVTPERRLVRSKDERTLHLMERIRPGFGSQNWAFGGFDPATAEPLKLQLPGDCLLCHQAAVMSDMTFSLNLLKRFVASGIVQYRLCQQPGRQPCPFQ*
Ga0137360_113899232	3300012361	Vadose Zone Soil	DPKTRTPRFEVTPQGHLVRSKDERTLHLMQKAQPGFGSQNWAFGGFDPVTSEPLKLDLPGDCQLCHQAALVSDMAFSLNLLKRFAASGTVQYSFCPHPGRQSCPFQ*
Ga0137404_100716021	3300012929	Vadose Zone Soil	SARLVGRDPKTRAPRFEVTPQGHLVRSKDERTLHLMQKVQPGFGSQNWAFGGFDPVTAKPLKLQLPGDCLLCHQAAMMSAMAFSMNLLKHFATSGAVQYSFCPQPGRQSCPFQ*
Ga0137407_106842412	3300012930	Vadose Zone Soil	SKDERTLHLMQKVQPGFGSQNWVFGGFDPISAEPLKLQLPGDCHLCHQAAVVSDMTYSMKLLKRFVASGAVQYSFCPQPGRQACPFP*
Ga0157378_108906482	3300013297	Miscanthus Rhizosphere	FALDVYSAKLVSRDRNTGAPRFEVTAQGHLARSKDERTLHLMEKIQPGFGSQNWIFGGFDPISAEPLKLQLPGDCHLCHQAAVVSDMTYSMKLLKRFVASGEVQYSFCPQPGRQACPFP*
Ga0163162_110878751	3300013306	Switchgrass Rhizosphere	SRDPKTGTPRFEATAQGHLVRSKDERTLHLMQKVRPGFGSQNWAFGGFDPITAEPLKLQLPGDCHLCHQAAVVSDMTYSMKLLRRFAESGVLQYSFCPQPGRQACPFP*
Ga0137403_101291071	3300015264	Vadose Zone Soil	SARLVGRDPKTRAPRFEVTPQGHLVRSKDERTLHLMQKVQPGFGSQNWAFGGFDPVTAKPLKLQLPGDCLLCHQAAMMSDMAFSMNLLKHFVTSGAVQYSFCPQPGRQSCPFQ*
Ga0132256_1008938002	3300015372	Arabidopsis Rhizosphere	RMIRRDPRTGASVFEKSPDGHLVRSKDEHTLHLMQKTRAGFGSRTWSFGGFDPATALPLKLDLPGDCLLCHQAALVSDLSFSLPLLRRYVATGQVQYGFCAQPGRQICPF*
Ga0132256_1021364811	3300015372	Arabidopsis Rhizosphere	ALEVHSARVSGRDPKTRAPRFATDAQGHLVRSKDEHTLHLMAKTQAELGSKNWTYGGYDPVTAVPLKLDLPGDCLLCHQAALASDMTYSMTLMKRFVSTGVVQYSFCSHPGRQACAFH*
Ga0132255_1003738483	3300015374	Arabidopsis Rhizosphere	DPKTGAPRFATDAQGHLVRGKDEHTLHLMAKTQAELGSKNWTYGGYDPVTAVPLKLDLPGDCLLCHQAALASDMTYSMTLMKRFVSTGVVQYSFCSHPGRQACAFH*
Ga0182039_113912242	3300016422	Soil	RDPQTGTPRFEVTPQGHLVRSKDERILHLMQKIRPGFGSQNWAFGGFDPTTEVPLKLQLPGDCQLCHQAAVVSDMTYSMKLLKRFVATGAIQYSFCPQPGRQPCPFP
Ga0182039_118075362	3300016422	Soil	GRLVRSKDEHVLHLMQKIRPGFGSQNWAFGGFDPVTAEPLKLELPGDCFLCHQAAVVSDMTFSLNLLKRFASSGAVQYRLCAQPGRQPCPFQ
Ga0187779_108487082	3300017959	Tropical Peatland	VGKDRKTHAPIFETTSQGHLVRSHDEPILHVMLKAQPGFGSQTWTFGGFDPVTAAPLHLQLPGDCLLCHQAALVSDMAFSMNLLKRFVTTGVVQYSFCRHPGRQSCAF
Ga0187822_100025876	3300017994	Freshwater Sediment	LGRDPTSGATIFATDRQKHLVRGGGERTLHLMQKTQPGFGSRNWTFGGFDPVTAEPLKLELPGDCLLCHQAAVVSDMAFSMSLLKRFAASGTVQYSYCPQPGRQICPF
Ga0184621_102847102	3300018054	Groundwater Sediment	AGIEALKRDPRLREFPVGVLFALDVHRAQLVARDHRTGAPTFASGPDGHLARSKDEHTLHLMQKIRAGSGSQNWAFGGFDPLTTEPLKLQLPGDCLLCHQAAVVSDMAFSMSLLKRFAETGAVQYGYCSHPGRQACVFP
Ga0184609_104278181	3300018076	Groundwater Sediment	KSGAPVFEATPDGHLGRSEDERILHLMRKIQPGSGSQNWAFGGFDPLTTEPLKLQLPGDCLLCHQAAVVSDMAFSMSLLKRFAETGAVQYGYCSHPGRQACVFP
Ga0066655_103163581	3300018431	Grasslands Soil	PQGRLRRSKDERTLHLMEKVQPGFGSQNWAFGGFDPVTTEPLKLQLPGDCHLCHQAAVMSDMTFSMTLLKRFVTSGTVQYRLCQQPGRQPCPFQ
Ga0193723_11858632	3300019879	Soil	REFPVGVLFALDVHRAQLVARDHRTGAPTFASGPDGHLARSKDERTLHLMQKIRAGSGSQNWAFGGFDPVTGAPLKLELPGDCLLCHQAAVVSDMTFSLALLKRFAESGAVQYRLCAQPGRQVCPF
Ga0193707_10883271	3300019881	Soil	YVSRAGIEALKRDPRLREFPVGVLFALDVHRAQLVARDHRTGAPTFASGPDGHLARSKDERTLHLMQKIRAGSGSQNWAFGGFDPVTGAPLKLELPGVCLLCHQAAVVSDMTFSLTLLKRFAESGAVQYRLCAQPGRQVCPF
Ga0224452_11440382	3300022534	Groundwater Sediment	PVGTLFALDVHRARLVGRDRKSGAPVFDATPDGHLVRSEDERILHLMRKIQPGSGSQNWAFGGFDPLTTEALKLQLPGDCLLCHQAAVVSDMAFSMSLLKRFAETGAVQYGYCSHPGRQACVFP
Ga0247660_10679541	3300024317	Soil	HSAKLVSRDPKTGAPRFEVTAQGHLVRTKDERTLHLMQKIQPGFGSQNWAFGGFDPITAEPLKLQLPGDCLLCHQAAVVSDMTYSTKLLKRFVVRGAVQYSFCPQPGRQACPFP
Ga0207684_104682041	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	GVLFALDVYSARLVGRDPRTRTPRFEVTSQGHLVRSKEERTLHLMQKIQPGFGSQNWAFGGFDPLTAEPLKLQLPGDCLRCHQAALMSDMAFSMNLLKRFVASGAVQYSFCPQPGRQACPFQ
Ga0207701_113605052	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	GASVFEKSPDGHLVRSKDEHTLHLMQKTRAGFGSRTWSFGGFDPATALPLKLDLPGDCLLCHQAALVSDLSFSLTLLRRYVATGQVQYGFCAQPGRQICPF
Ga0207686_112931502	3300025934	Miscanthus Rhizosphere	LREFPVGVLFALDVHRAKLVARDHRTGAPTFASGPDGHLARSKDERTLHLMQKIRAGSGSQNWAFGGFDPVTGAPLKLELPGDCLLCHQAAVVSDMTFSLTLLKRFAESGAVQYRLCAQPGRQVCPF
Ga0207691_101914591	3300025940	Miscanthus Rhizosphere	DPGLSELPVGALFALDVYSARMIRRDPRTGASVFEKSPDGHLVRSKDEHTLHLMQKTRAGFGSRTWTFGGFDPATALPLKLDLPGDCLLCHQAALVSDLSFSLTLLRRYVATGQVQYGFCAQPGRQICPF
Ga0209803_10866084	3300026332	Soil	DRKTQAPIFEATPQGHLVRSKDERTLHLMQKVQPGFGSQNWAFGGFDPLTAEPLKLQLPGDCLLCHQAALVSDMAFSLNLLKRFAATGSVQYSFCLQPGRQPCPFQ
Ga0257163_10360601	3300026359	Soil	ALKRDPRLREFPVGVLFALDVHRAKLVARDHRTGAPTFASGPDGHLARSKDERTLHLMQKIRAGSGSQNWAFGGFDPVTGAPLKLELPGDCLLCHQAAVVSDMTFSLTLLKRFAESGAVQYRLCAQPGRQACPF
Ga0209058_11085861	3300026536	Soil	KRDPRLKEFPVGVLFALDVHSASDVGRDPTTRAPRFDVTPQGRLRRSKDERTLHLMEKVQPGFGSQNWAFGGFDPVTTEPLKLQLPGDCHLCHQAAVMSDMTFSMTLLKRFVTSGTVQYRLCQQPGRQPCPFQ
Ga0209157_13731022	3300026537	Soil	YSARLVGRDPKTRAPRFEVTPQGHLVRSKDERTLHLMQKVQPGFGSQNWAFGGFDPVTAKPLKLQLPGDCLLCHQAAMMSDMAFSMNLLKHFVTSGAVQYSFCPQPWATIVSVSMTGAAPSPPPVFMALLAP
Ga0209156_100375991	3300026547	Soil	DVHSASDVGRDPTTRAPRFDVTPQGRLRRSKDERTLHLMEKVQPGFGSQNWAFGGFDPVTAEPLKLQLPGDCHLCHQAAVMSDMTFSMTLLKRFVTSGTVQYRLCQQPGRQPCPFQ
Ga0209474_107024332	3300026550	Soil	HSASDVGRDPTTRAPRFDVTPQGRLRRSKDERTLHLMEKVQPGFGSQNWAFGGFDPVTAEPLKLQLPGDCHLCHQAAVMSDMTFSMTLLKRFVTSGTVQYRLCQQPGRQPCPFQ
Ga0209117_10224141	3300027645	Forest Soil	HRTGAPTFASGPDGHLARSKDERTLHLMQKIRAGSGSQNWAFGGFDPVTGAPLKLELPGDCLLCHQAAVVSDMTFSLTLLKRFAESGAVQYRLCAQPGRQACPF
Ga0209466_10786191	3300027646	Tropical Forest Soil	KANPRLQELPVGVLLALDVYSAREVSRDRKTGAIAFETTREGHLVHSKSERTLHLMQKTLRGFGSQTWTFGGYDPLTAAPLKLELPGDCLLCHQAAVVSDMAFSLSLLKRFAATGAVQYSFCQHPGRQACAF
Ga0209811_101720741	3300027821	Surface Soil	RFEATTQGHLVRSKDERTLHLMQKVRPGFGSQNWAFGGFDPITAEPLKLQLPGDCHLCHQAAVVSDMTYSMKLLKRFAESGAVQYSFCPQPGRQACPFP
Ga0209180_107636101	3300027846	Vadose Zone Soil	EFPVGVLFALEVYSARLVGRDPKTRAPRFEVTPQGHLVRSKDERTLHLMQKVQPGFGSQNWAFGGFDPVTAKPLKLQLPGDCLLCHQAAMMSDMAFSMNLLKHFVTSGAVQYSFCPQPGRQSCPFQ
Ga0209590_109140001	3300027882	Vadose Zone Soil	DPKTRTPRFEVTPQGHLVRSKDEHTLHLMQKFQPGFGSQNWAFGGFNPVTSEPLKLQLPGDCHLCHQAAVVSDMAFSLNLLKRFVARGAVQYSFCPQPGRQSCPFQ
Ga0307299_103189172	3300028793	Soil	VKRDPRLKEFPVGTLFALDVHRARLVGRDRKSGAPVFDATPDGHLVRSEDERILHLMRKIQPGSGSQNWAFGGFDPLTTEPLKLQLPGDCLLCHQAAVVSDMAFSMSLLKRFAETGAVQYGYCSHPGRQACVFP
(restricted) Ga0255310_100701131	3300031197	Sandy Soil	PTSGATIFVTDRQKHLVRGGGERTLHLMQKTQPGFGSRNWTFGGFDPVTAEPLKLELPGDCLLCHQAAVVSDMAFSMSLLKRFAASGTVQYSYCPQPGRQICPF
Ga0307469_104114522	3300031720	Hardwood Forest Soil	DAKTHTPRFEVTPEGRLVRSKDERTLHLMEKVRPGFGSQNWAFGGFDPATAEPLKLQLPGDCHLCHQAAVMSDMTFSLNLLKRFAASGAVQYRLCQQPGRQPCPFQ
Ga0307468_1002188152	3300031740	Hardwood Forest Soil	EVTPQGHLIRTKDERTLHLMGKVRPGFGSQNWTFGGFDPVTAEPLKLQLPGDCLLCHQAAMMSDMTFSMNLLKRFIASGTAQYRLCQQPGRQPCPAQ
Ga0307468_1020974631	3300031740	Hardwood Forest Soil	EADPDGHLVRSKDEHILHLMRKIQPGFGSQNWAFGGFDPFTADPLNLQLPGDCLLCHQAAVVSDMAFSMRLLKRFAETGAVQYAYCVHPGRQQCVF
Ga0306918_101981661	3300031744	Soil	GRLVRSKDEHVLHLMQKIRPGFGSQNWAFGGFDPVTAEPLKLELPGDCLLCHQAAVVSDMTFSLNLLKRFASSGAVQYRLCAQPGRQPCPFQ
Ga0318521_101581681	3300031770	Soil	ADQSAGRDPKTHAPRFEMTPAGRLVRSKDEHVLHLMQKIRPGFGSQNWAFGGFDPVTAEPLKLELPGDCFLCHQAAVVSDMTFSLNLLKRFASSGAVQYRLCAQPGRQPCPFQ
Ga0318548_101235922	3300031793	Soil	FEMTPDGRLVRSKDEHVLHLMQKIRPGFGSQNWAFGGFDPVTAEPLKLELPGDCFLCHQAAVVSDMTFSLNLLKRFASSGAVQYRLCAQPGRQPCPFQ
Ga0318568_101111382	3300031819	Soil	AGVLFALDVHSAREAGRDPKTHAPRFEMTPAGRLVRSKDEHVLHLMQKIRPGFGSQNWAFGGFDPVTAEPLKLELPGDCFLCHQAAVVSDMTFSLNLLKRFASSGAVQYRLCAQPGRQPCPFQ
Ga0310917_102509471	3300031833	Soil	MTPDGRLVRSKDEHVLHLMQKIRPGFGSQNWAFGGFDPVTAEPLKLELPGDCFLCHQAAVVSDMTFSLNLLKRFASSGAVQYRLCAQPGRQPCPFQ
Ga0318517_102885261	3300031835	Soil	GLGIPAGRLVRSKDEHVLHLMQKIRPGFGSQNWAFGGFDPVTAEPLKLELPGDCFLCHQAAVVSDMTFSLNLLKRFASSGAVQYRLCAQPGRQPCPFQ
Ga0318520_102428672	3300031897	Soil	PSGVLFALDVYSARRMGRDPQTGTPRFEVTPQGHLVRSKDERILHLMQKIRPGFGSQNWAFGGFDPTTEVPLKLQLPGDCQLCHQAAVVSDMTYSMKLLKRFVATGAIQYSFCPQPGRQPCPFP
Ga0307470_101823101	3300032174	Hardwood Forest Soil	ALKQDPRLKELPAGALLALDVHSARMLGRDRKTGTPRFEADPDGHLVRSKDEHILHLMRKIQPGFGSQNWAFGGFDPFTAEPLNLHLPGDCLLCHQAAVVSDMAFSMRLLKRFAETGAVQYAYCVHPGRQPCVF
Ga0307471_1034365631	3300032180	Hardwood Forest Soil	FEMTREGRLVRSKDERTLHLMQKIQPGFGSGNWAFAGFDPVTAAPLNLQLPGDCLLCHQAAVVSDMAFSLSALKRFVASGAVQYSFCAHPGRQSCPSR
Ga0307472_1005823721	3300032205	Hardwood Forest Soil	KTGTPRFETTAQGHLVRSKDERILHLMQKIQPGFGSQNWVFGGFDPISTEPLKLQLPGDCHLCHQAAVVSDMTYSMKLLKRFVASGVVQYSFCPQPGRQACPFP
Ga0326730_11088352	3300033500	Peat Soil	KHLVRGRGERTLHLMQKTQPGFGSQNWTFGGFDPVTAEPLKLELPGDCLLCHQAAVVSDMAFSRNLMRRFTTTGAVQYSFCPQPGRQICPF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters