Metagenome / Metatranscriptome Family F102948

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102948
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	74 residues
Representative Sequence	MADKPNTDGAPAPTPEQEVRRLYEEAESRVAKATERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRVASRQDI
Number of Associated Samples	91
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.05 %
% of genes near scaffold ends (potentially truncated)	97.03 %
% of genes from short scaffolds (< 2000 bps)	98.02 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.059 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.822 % of family members)
Environment Ontology (ENVO)	Unclassified (32.673 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.495 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.26% β-sheet: 0.00% Coil/Unstructured: 40.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01381	HTH_3	81.19
PF13560	HTH_31	10.89
PF11339	DUF3141	4.95
PF06850	PHB_depo_C	1.98

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3243	Poly-beta-hydroxybutyrate synthase	Lipid transport and metabolism [I]	1.98
COG4553	Poly-beta-hydroxyalkanoate depolymerase	Lipid transport and metabolism [I]	1.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.05 %
Unclassified	root	N/A	4.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.05 %
Unclassified	root	N/A	4.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.06 %
Unclassified	root	N/A	4.95 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.99 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	93.07 %
Unclassified	root	N/A	4.95 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.99 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	93.07 %
Unclassified	root	N/A	4.95 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.99 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	16.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.89 %
Unclassified	root	N/A	4.95 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.99 %

Name	Rank	Taxonomy	Distribution
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	8.91 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7.92 %
Unclassified	root	N/A	4.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.99 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.99 %

Name	Rank	Taxonomy	Distribution
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	8.91 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	7.92 %
Unclassified	root	N/A	4.95 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.99 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	8.91 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	7.92 %
Unclassified	root	N/A	4.95 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.99 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	8.91 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	7.92 %
Unclassified	root	N/A	4.95 %
unclassified Symbiodinium	no rank	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium	0.99 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	8.91 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	7.92 %
Unclassified	root	N/A	4.95 %
Symbiodinium sp. KB8	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	0.99 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_109572686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300000956\|JGI10216J12902_109572687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	508	Open in IMG/M
3300001305\|C688J14111_10230944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300001686\|C688J18823_10678341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	656	Open in IMG/M
3300001686\|C688J18823_10952529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300001989\|JGI24739J22299_10239017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300001990\|JGI24737J22298_10260639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	512	Open in IMG/M
3300002070\|JGI24750J21931_1075251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	556	Open in IMG/M
3300002155\|JGI24033J26618_1077171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	507	Open in IMG/M
3300002568\|C688J35102_118299392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300002568\|C688J35102_119092046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300002568\|C688J35102_119425364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300004081\|Ga0063454_100935876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	689	Open in IMG/M
3300004081\|Ga0063454_101304620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300004153\|Ga0063455_100059152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1364	Open in IMG/M
3300004153\|Ga0063455_100524286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	746	Open in IMG/M
3300004479\|Ga0062595_102660862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300004643\|Ga0062591_101435309	Not Available	686	Open in IMG/M
3300005327\|Ga0070658_10918523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300005333\|Ga0070677_10521213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300005339\|Ga0070660_100441873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1078	Open in IMG/M
3300005340\|Ga0070689_100676398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	900	Open in IMG/M
3300005341\|Ga0070691_10556239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300005456\|Ga0070678_102297333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300005530\|Ga0070679_101997347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300005543\|Ga0070672_101610317	Not Available	583	Open in IMG/M
3300005545\|Ga0070695_100754663	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005547\|Ga0070693_100779760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300005549\|Ga0070704_100412087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1155	Open in IMG/M
3300005617\|Ga0068859_100308721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1675	Open in IMG/M
3300005719\|Ga0068861_102172128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300005719\|Ga0068861_102424609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300005842\|Ga0068858_102543177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300006794\|Ga0066658_10555385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300006854\|Ga0075425_101897390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	667	Open in IMG/M
3300009094\|Ga0111539_11356674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300009098\|Ga0105245_10584174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1142	Open in IMG/M
3300009098\|Ga0105245_12458472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300009156\|Ga0111538_10564130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1443	Open in IMG/M
3300009176\|Ga0105242_12885264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300009551\|Ga0105238_12685711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300009789\|Ga0126307_10528208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	952	Open in IMG/M
3300010037\|Ga0126304_11129768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300010039\|Ga0126309_10810099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300010040\|Ga0126308_11372985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300010045\|Ga0126311_11428492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300010166\|Ga0126306_11142486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	638	Open in IMG/M
3300010337\|Ga0134062_10235107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	847	Open in IMG/M
3300010371\|Ga0134125_12599503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	550	Open in IMG/M
3300010399\|Ga0134127_11548416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	736	Open in IMG/M
3300011119\|Ga0105246_10813243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300012091\|Ga0136625_1212200	Not Available	657	Open in IMG/M
3300012212\|Ga0150985_110018490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300012353\|Ga0137367_11024259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300012355\|Ga0137369_10284152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1235	Open in IMG/M
3300012532\|Ga0137373_10111499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2370	Open in IMG/M
3300012911\|Ga0157301_10402605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300012958\|Ga0164299_11012674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	613	Open in IMG/M
3300013297\|Ga0157378_13108725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300013306\|Ga0163162_12881352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300014488\|Ga0182001_10253170	Not Available	682	Open in IMG/M
3300014497\|Ga0182008_10260829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	896	Open in IMG/M
3300014497\|Ga0182008_10770378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300015077\|Ga0173483_10517471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300015372\|Ga0132256_102409060	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	629	Open in IMG/M
3300015373\|Ga0132257_104485108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	508	Open in IMG/M
3300017965\|Ga0190266_10928962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	574	Open in IMG/M
3300018051\|Ga0184620_10080145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	976	Open in IMG/M
3300018061\|Ga0184619_10409607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	611	Open in IMG/M
3300021184\|Ga0196959_10166741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	548	Open in IMG/M
3300025901\|Ga0207688_10848188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300025927\|Ga0207687_10914159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300025932\|Ga0207690_10645744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	867	Open in IMG/M
3300025935\|Ga0207709_11684226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300025938\|Ga0207704_11660370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	549	Open in IMG/M
3300025939\|Ga0207665_10898790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300025960\|Ga0207651_10978741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	755	Open in IMG/M
3300025981\|Ga0207640_11677770	Not Available	573	Open in IMG/M
3300026067\|Ga0207678_10766824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	851	Open in IMG/M
3300026078\|Ga0207702_10790926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	937	Open in IMG/M
3300026088\|Ga0207641_10169816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1990	Open in IMG/M
3300026118\|Ga0207675_100810203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	950	Open in IMG/M
3300026121\|Ga0207683_11715274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300028704\|Ga0307321_1029069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	997	Open in IMG/M
3300028705\|Ga0307276_10091478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	726	Open in IMG/M
3300028712\|Ga0307285_10096777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300028719\|Ga0307301_10234598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300028720\|Ga0307317_10014042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2409	Open in IMG/M
3300028720\|Ga0307317_10199286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300028722\|Ga0307319_10222094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	620	Open in IMG/M
3300028755\|Ga0307316_10317979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	570	Open in IMG/M
3300028791\|Ga0307290_10243335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300028796\|Ga0307287_10229773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	703	Open in IMG/M
3300028872\|Ga0307314_10193683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300028880\|Ga0307300_10340738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	515	Open in IMG/M
3300028881\|Ga0307277_10043164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1824	Open in IMG/M
3300030785\|Ga0102757_11410941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	613	Open in IMG/M
3300031114\|Ga0308187_10247699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300031847\|Ga0310907_10636180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300032075\|Ga0310890_11083081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300032205\|Ga0307472_101299155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	700	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.40%
Host-Associated	Host-Associated	39.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.43%
Plants	Host-Associated → Plants	39.60%
Aquatic	Environmental → Aquatic	2.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.81%
Sediment	Environmental → Aquatic → Sediment	1.98%
Freshwater	Environmental → Aquatic → Freshwater	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.60%
Loam	Environmental → Terrestrial → Soil → Loam	16.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.98%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.98%
Ice	Environmental → Aquatic → Freshwater → Ice	0.99%
Sand	Environmental → Terrestrial → Soil → Sand	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	9.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.99%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	9.90%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.98%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001989	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5	Host-Associated	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1095726861	3300000956	Soil	MADDRPTPEQEARRLYDETEARVAKAAERVVSRESFGEVLAMATENLVALTRIGFDAMDLVWSNLRL
JGI10216J12902_1095726871	3300000956	Soil	MAEQRPTPEEEARRLYDETEARVAKAAERAVSRESFGEVLAMATENVVALTRIGFDAMDLVWSNLRL
C688J14111_102309441	3300001305	Soil	MADTPKNDGAPAPTPDQEVRRLYEEAESRVAKAAERVVSRDSFGELLAMVTENVVALTRIGNEAMDLVLRNLRVASRQDINRLTRA
C688J18823_106783411	3300001686	Soil	MADKPNNAGAPAPTPDQEVRRLYEEAESRVAKATERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRVASRQDINRLTRALG
C688J18823_109525292	3300001686	Soil	MADTPKNDGAPAPTPDQEVRRLYEEAESRVAKAAERVVSRDSFGELLAMVTENVVALTRIGNEAMDL
JGI24739J22299_102390172	3300001989	Corn Rhizosphere	MAEKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGEILAM
JGI24737J22298_102606391	3300001990	Corn Rhizosphere	MADKPNTETVPAPTPEQEVRRLYEEAESRVAKATERIVARDSFGELLA
JGI24750J21931_10752512	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	MADKPNTETAPTPTPEQEVRRLYEEAESRVAKATERIVARDSFGELLAMVTENAVAVTRIGNEAM
JGI24033J26618_10771712	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	MAEKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGELLAMVTENAVAVTRIGNEAMDLVLRNLRVASRQDINRLTRALGRTED
C688J35102_1182993921	3300002568	Soil	MADKPNPDRAPAPTPDQEVRRLYEEAETRVARAAERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRVASRQDINRLTRALGRTED
C688J35102_1190920461	3300002568	Soil	MADTPKNDGAPAPTPDQEVRRLYEEAESRVAKAAERVVSRDSFGELLAMVTENVVALTRIGNEA
C688J35102_1194253642	3300002568	Soil	MADKPNTDGAPTPTPEQEVRRLYEEAETRVAKSAERVVSRDSFGELLAMVTENVVALTRIGNEAMDMVLRNLRVASRQDI
Ga0063454_1009358761	3300004081	Soil	MADKPKQNGAPPPSPDQEVRRLYEEAESRVAKAAERVVSRDSFGELLAMATENAVALTRIGNEAMDLVLRNLRLASRQDINRLTRALG
Ga0063454_1013046202	3300004081	Soil	VGTMADNQKSDGAPAPTPDQEVRRLYEEAESRVAKAAERVVSRDSFGELLAMVTENSVALVRIGNEAMDL
Ga0063455_1000591521	3300004153	Soil	MADKPNTDGAPTPTPEQEVRRLYEEAETRVAKSAERVVSRDSFGELLAMVTENTVALTR
Ga0063455_1005242861	3300004153	Soil	MADKPNNAGAPAPTPDQEVRRLYEEAESRVAKATERVVSRDSFGELLAMVTENTVALTR
Ga0062595_1026608622	3300004479	Soil	MADKPNTETVPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGELLAMVTENAVAVTRIGNEAMDLVLRNLR
Ga0062591_1014353091	3300004643	Soil	MADKPNTDGTPAPTPDQEVRRLYEEAESRVAKAAERVVSRDSFGELLAMVTENAVALTRI
Ga0070658_109185232	3300005327	Corn Rhizosphere	MADKPNTDGTPAPTPDQEVRRLYDEAENRVAKAAERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRVASRQDINRLTRA
Ga0070677_105212131	3300005333	Miscanthus Rhizosphere	MAEKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGEILAMVTENAVAVTRIGNEAM
Ga0070660_1004418731	3300005339	Corn Rhizosphere	MAEKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGEILAMVTENAV
Ga0070689_1006763981	3300005340	Switchgrass Rhizosphere	MAEKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGELLAMVTENAVAVTRIGNEAM
Ga0070691_105562391	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MAEKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGEILAMVTENA
Ga0070678_1022973331	3300005456	Miscanthus Rhizosphere	MADKPNSDGAPAPTPDQEVRRLYDEAETRVARAAERVVSRDSFGELLAMVTENAVAL
Ga0070679_1019973471	3300005530	Corn Rhizosphere	MADKPNTDGTPAPTPDQEVRRLYDEAENRVAKAAERVVSRDSFGELLAMVTE
Ga0070672_1016103171	3300005543	Miscanthus Rhizosphere	MADKPNTETVPAPTPEQEVRRLYEEAESRVAKATERIVARDSFGELLAMVTENAVAVTRIGNEAMDL
Ga0070695_1007546633	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MADKPNSDGAPAPTPDQEVRRLYDEAETRVARAAERVVSRDSFGELLAMVTENAVALTRIGNEAMDMVL
Ga0070693_1007797601	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MADKPNTDGTPAPTPDQEVRRLYDEAENRVAKAAERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRV
Ga0070704_1004120871	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MADKPNTETVPAPTPEQEVRRLYEEAESRVAKATERIVARDSFGELLAMVTENAVAVTRIGNEAMDLVLRNLRVASRQDINRLT
Ga0068859_1003087213	3300005617	Switchgrass Rhizosphere	MAEKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGEILAMVTENAVAVTRIGNE
Ga0068861_1021721282	3300005719	Switchgrass Rhizosphere	MADKPKQNGAPPPTPDQEVRRLYEEAESRVAKAAERVVSRDSFGEVLAMVTENAVAVTRIGNEAMDLVLRNLR
Ga0068861_1024246091	3300005719	Switchgrass Rhizosphere	MADKPNTDGAPAPTPEQEVRRLYEEAESRVAKATERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRVASRQDINRLTRA
Ga0068858_1025431771	3300005842	Switchgrass Rhizosphere	MADKPNTETVPAPTPEQEVRRLYEEAESRVAKATERIVARDSFGELLAMVTENAVAVTRIGNEAMDLVLRNLRVASRQDINRLTRA
Ga0066658_105553852	3300006794	Soil	MADTPRTDGAPAPTPDQEVRRLYEEAESRVAKAAERVVSRDSFGELLAMMTENVVAITRI
Ga0075425_1018973901	3300006854	Populus Rhizosphere	MADKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGELLAMVTENAVAMTRIGNEAMDLVLRNL
Ga0111539_113566742	3300009094	Populus Rhizosphere	MADKPNTDGTPAPTPDQEVRRLYDEAENRVAKAAERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRVASRQDINRLT
Ga0105245_105841743	3300009098	Miscanthus Rhizosphere	MADKPNTETAPAPTPEQEVRRLYEEAESRVAKATERIVARDSFGELLAMVTENAVAVTRIGNEAMDLVLRNLR
Ga0105245_124584722	3300009098	Miscanthus Rhizosphere	MAENPRTDGAPAPTPDQEVRRLYEEAESRVAKAAERVVSRDSFGELLAMMTENVVALTRIGNEAMDLVLRNLRIASRQDINRMSRALGRAEDKLE
Ga0111538_105641301	3300009156	Populus Rhizosphere	MADKPNTDGTPAPTPDQEVRRLYDEAENRVAKAAERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRVASRQDLNRLT
Ga0105242_128852642	3300009176	Miscanthus Rhizosphere	MADKPNSDGAPAPTPDQEVRRLYDEAETRVARAAERVVSRDSFGELLAMVTENAVALTRIGNEAMDMVLRNLRIA
Ga0105238_126857111	3300009551	Corn Rhizosphere	MADDRPNPEEEARRLYEEAESRTAKAAERVVSRESFGEVLAMMTENVVALTRIGNEAMDLVLRNLRVASRQDINRLTRALGRTE
Ga0126307_105282083	3300009789	Serpentine Soil	MADKPNQDGAPAPTPEQEVRRLYEEAETRVARAAERVVSRDSFGELLAMATENAVALTRIGNEAMDLVLRNLRIASRQDINRLT
Ga0126304_111297682	3300010037	Serpentine Soil	MADKPNQDGAPAPTPEQEVRRLYDEAETRVARAAERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRIASRQDINRLTRALGRTED
Ga0126309_108100992	3300010039	Serpentine Soil	MADKPNSDGAPTPTPEQEVRRLYEEAETRVARATERVVSRDSFGELLAMVT
Ga0126308_113729852	3300010040	Serpentine Soil	MADKPNQDGAPAPTPEQEVRRLYEEAETRVARAAERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRVASRQDINRLTRQLGRTEDPGA
Ga0126311_114284922	3300010045	Serpentine Soil	MADKPNQDGAPAPTPEQEVRRLYEEAETRVARAAERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRIASRQDINRL
Ga0126306_111424862	3300010166	Serpentine Soil	MADKSSDGSPAPTPEQEVRRLYEEAESRVAKAAERVVSRDSFGELLAQVTENAVALTKIA
Ga0134062_102351073	3300010337	Grasslands Soil	MAERPTPDEEVRRLYGEAEASAARAAERVVSRESFGELLAMMTENVVALTRIANETFDLFLRNLRVASRRDLIDLR
Ga0134125_125995032	3300010371	Terrestrial Soil	MADKPNTDGTPAPTPDQEVRRLYEEAENRVAKAAERVVSRDSFGELLAMVTE
Ga0134127_115484161	3300010399	Terrestrial Soil	MADKPNTETAPAPTPEQEVRRLYEEAESRVAKATERIVARDSFGELLAMVTENAVAVTRIGNEAMDLVLRNLRVASRQDINRLTR
Ga0105246_108132432	3300011119	Miscanthus Rhizosphere	MADNPNTDSAPAPTPDQEVRRLYEEAESRVAKATERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRVASRQDINRL
Ga0136625_12122001	3300012091	Polar Desert Sand	MNSRPSPTEEVKRLYEEAESRTAKAMETLVARDSFGELLAKVTENVMSLTKIGNEAMDMAVRNLRVAGRQD
Ga0150985_1100184901	3300012212	Avena Fatua Rhizosphere	MADTPKNDGAPAPTPDQEVRRLYEEAESRVAKAAERVVSRDSFGELLAMVTENVVALTRIGNEAMDLVLRNLRVASRQD
Ga0137367_110242591	3300012353	Vadose Zone Soil	VAEDRPTPEQEVRRLYEEGESRVAKAAERVVSRDSFGELLAMATENVVALTRIGFDAMDLVWSNLRLAGRRDITRLGSQLGSTE
Ga0137369_102841522	3300012355	Vadose Zone Soil	VAEDRPTPEQEARRLYEEAEARVAKAAERVVSRDSFGELLAMATENVVALTRMSFDALDLVWSNLRLAGRRDITRLA
Ga0137373_101114994	3300012532	Vadose Zone Soil	VAEDRPTPEQEVRRLYEEGESRVAKAAERVVSRDSFGELLAMATKNVVALTRIGFDAMDLVWSNLRL
Ga0157301_104026051	3300012911	Soil	MADERPTPEEEARRLYDETEASVAKAAERVVSRESFGEVLAMATENVVALTRIGFDAMDLVWSNLWLAGRRDITRL
Ga0164299_110126742	3300012958	Soil	VAEEKPTPEQEVRRLYEDAETRVAKAAERMVSRDSFGELLAMATENVVAITRIGFDTLDLLWSNLRLAGRRDV
Ga0157378_131087252	3300013297	Miscanthus Rhizosphere	MADNTTENGAPPPTPEQEVRRLYEEAETRVARAAERVVSRDSFGELLAMVTENAVAITRIGNEAMDLVLRNLRVASRQDINRLT
Ga0163162_128813522	3300013306	Switchgrass Rhizosphere	MADKPNSDGAPAPTPDQEVRRLYDEAETRVARAAERVVSRDSFGELLAMMTENAVALTRIGNEA
Ga0182001_102531702	3300014488	Soil	MADTPRTDGSPAPTPDQEVRRLYEEAESRVAKAAERVVSRDSFGELLAMMTENVVAITRIGNEAMDLVLRNLRV
Ga0182008_102608291	3300014497	Rhizosphere	MADKPNTDGTPAPTPDQEVRRLYEEAESRVAKAAERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRVASRQDLNRLTR
Ga0182008_107703782	3300014497	Rhizosphere	MTEDRPTPEQETRRLYEEAESRMAKAAERVVSRDSFGEVLAMATENVVALTRMSFDALDLVWSNLRLAGRRDITRLGRQLGRT
Ga0173483_105174712	3300015077	Soil	MADKPNTDGTPAPTPDQEVRRLYEEAESRVAKAAERVVSRDSFGELLARVAENVLAVTKIGSDAADLVVRNLRLAGRRDIIGLARQLAR
Ga0132256_1024090602	3300015372	Arabidopsis Rhizosphere	MADDRPTPEQETRRLYDETEARVAKAAERVVSRESFGEVLAMATENVVALTRIGFDAMDLVWSNLRLAGRRDITRLA
Ga0132257_1044851081	3300015373	Arabidopsis Rhizosphere	MLVAKGKYAVHMADKPNTDGAPVPTPEQEVRRLYEEAETRVAKAAERVVSRDSFGELLAM
Ga0190266_109289621	3300017965	Soil	MAEDRPTPEEETRRLYEDAESRVAKAAERMVSRESFGELLAMATENVVALTRMGFDGMDLVWSNLRLAGR
Ga0184620_100801453	3300018051	Groundwater Sediment	MAEDRPTPEQEARRLYEDAEARVAKAAERAVSRDSFGEVLAMATENVVALTRMGFDAMDLVWSNLRLA
Ga0184619_104096072	3300018061	Groundwater Sediment	MAEDRPTPEQEVRRLYDEAEARVAKAAERVVSRDSFGELLAMATENVVALTRMSFDGLDLVWSNLRLAGRRDITRLAR
Ga0196959_101667412	3300021184	Soil	MADKPNQDGAPAPTPEQEVRRLYEEAETRVARAAERVVSRDSFGELLAMVTENVVALTRIGNEAMDLVLRNLRV
Ga0207688_108481882	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MAEKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGEILAMVTENAVAVTRIGNEAMDL
Ga0207687_109141591	3300025927	Miscanthus Rhizosphere	MADKPNTDGAPAPTPEQQVRRLYEEAESRVAKATERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRVASRQDINRLTRAL
Ga0207690_106457441	3300025932	Corn Rhizosphere	MADKPNSDGAPAPTPDQEVRRLYDEAETRVARAAERVVSRDSFGELLAMVTENAVALTRIGNEAMDMV
Ga0207709_116842261	3300025935	Miscanthus Rhizosphere	MADKPNTDGAPAPTPEQEVRRLYEEAESRVAKATERVVSRDSFGELLAMVTENAVALTR
Ga0207704_116603701	3300025938	Miscanthus Rhizosphere	MAEKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGEILAMVTENAVAVTRIGNEAMDLVLRNLRVASRQ
Ga0207665_108987901	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MADKPNTDSAPAPTPEQEVRRLYEEAESRVAKASERVVSRDSFGELLAMVTENAVAVTRIGNEAMDLVMRNLRVASRQDINRLTRALGRSTFGRLS
Ga0207651_109787412	3300025960	Switchgrass Rhizosphere	MAEKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGEILAMVTENAVAVTRIGNEAMDLVLRNLRVASRQDINRLTRAL
Ga0207640_116777702	3300025981	Corn Rhizosphere	MAEQRPTPEEEARRLYDETEARVAKAAERVVSRESFGEVLAMATENVVALTRIGFEAMDLVWSNLRLAGRRIFTQISGGAAFAPSAA
Ga0207678_107668243	3300026067	Corn Rhizosphere	MADNPNTDSAPAPTPDQEVRRLYEEAESRVAKAAERVVSRDSFGELLAMVTENTVALTRIGNEAMDLVLRNLRLASRQDINRLTRALG
Ga0207702_107909262	3300026078	Corn Rhizosphere	MTEDRPTPEQEVRRLYEEAESRLAKATERVVSSDSFGELLAMATENVVALTRMSFDALDLVWSNLRLAGRRDITRLAKQLGRTEDK
Ga0207641_101698161	3300026088	Switchgrass Rhizosphere	MAEKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGEILAMVTENAVAVTRIGNEAMDLVLRNLRVASRQDINRLTRALG
Ga0207675_1008102033	3300026118	Switchgrass Rhizosphere	MADKPNSDGAPAPTPDQEVRRLYDEAETRVARAAERVVSRDSFGELLAMMTENVVALTRIGNEAMDLVLRNLRIASRQD
Ga0207683_117152741	3300026121	Miscanthus Rhizosphere	MADKPNSDGAPAPTPDQEVRRLYDEAETRVARAAERVVSRDSFGELLAMVTENAVALTRIGN
Ga0307321_10290691	3300028704	Soil	MAEDRPTPEQEARRLYEDAEARVAKAAERAVSRDSFGEVLAMATENVVALTRMGFDAMDLVWSNLRLAGRRDITR
Ga0307276_100914782	3300028705	Soil	MAEDRPTPEQEARRLYEDAEARVAKAAERVVSRDSFGEVLAMATENVVALTRMGFDAMDLVWSNLRLAGRRDITRL
Ga0307285_100967771	3300028712	Soil	MAEDRPTPEQEARRLYEDAEARVAKAAERVVSRDSFGEVLAMATENVVAVTRIGFEAMDLVWSNLRLAGRRDITRL
Ga0307301_102345982	3300028719	Soil	MAEDRPTPEQEARRLYEEAESRVAKAAERVVSRDSFGELLAMATENVVALTRMSFDALDLVWSNLRLAGRRDITRLGRQLGRTE
Ga0307317_100140424	3300028720	Soil	MAEDRPTPEQEARRLYEDAEARVAKAAERVVSRDSFGEVLAMATENVVALTRMGFDAMDLVWSNLRLAGRRDITRLARQLGRTE
Ga0307317_101992862	3300028720	Soil	MAEDRPTPEQEARRLYEEVESRVAKAAERVVSRDSFGELLAMATENVVAVTRMSFDALDLVWSNLRLAGRRDITRLGRQLGRNED
Ga0307319_102220941	3300028722	Soil	VSEDRPTPEQEVRRLYEEAEARVAKAAERVVSRDSFGELLAVATENVVALTRIGFDAMDLVWSNLRL
Ga0307316_103179792	3300028755	Soil	VAEDRPTPEQETRRLYEEAEARVAKAAERVVSRDSFGELLAMATENVVALTRMSFDALDLVWSNLRLAG
Ga0307290_102433351	3300028791	Soil	MAEDRPTPEQEARRLYEDAEARVAKAAERVVSRDSFGEVLAMATENVVALTRMGFDAMDLVWSNLRLAGRRDITR
Ga0307287_102297732	3300028796	Soil	VSEDRPTPEQEVRRLYEEAEARVAKAAERVVSRDSFGELLAVATENVVALTRIGFDAMDLVWSNLRLAGRRDVTRLTRQLG
Ga0307314_101936831	3300028872	Soil	MAEERPTPEEEARRLYEEAESRMAKAAERVVSRESFGEVLAMATENVVALTRIGFEAMDLVWSNLRLAGRRDITRLARQLGRTED
Ga0307300_103407381	3300028880	Soil	VSEDRPTPEQEVRRLYEEAEARVAKAAERVVSRDSFGELLAVATENVVALTRIGFDAMDLVWSNLRLAGRRDV
Ga0307277_100431641	3300028881	Soil	MAEDRPTPEEQASRLYEEAESRVAKAAERVVSRDSFGELLAMATENVVAVTRMGFDAMDLVWSNL
Ga0102757_114109411	3300030785	Soil	MADKPNNDGTPAPTPEQEVRRLYEEAETRVAKAAERVVSRDSFGEMLAMVTENVVALTRIGNEAMDLVLRNLRVASRQD
Ga0308187_102476991	3300031114	Soil	MAEDRPTPEQEARRLYEDAEARVAKAAERVVSRDSFGEVLAMATENVVALTRMGFDAMDLVWSNLRLAGR
Ga0310907_106361802	3300031847	Soil	MADKPNTDGAPAPTPEQEVRRLYEEAESRVAKATERVVSRDSFGELLAMVTENAVALTRIGNEAMDLVLRNLRVASRQDI
Ga0310890_110830811	3300032075	Soil	MADKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVSRDSFGELLAMVTENAVAVTR
Ga0307472_1012991551	3300032205	Hardwood Forest Soil	MAEKPNTDGAPAPTPEQEVRRLYEEAESRVAKAAERVVARDSFGEILAMVTENAVAVTRIGNEAMDLVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102948

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences