NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F102824

Metagenome Family F102824

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F102824
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 72 residues
Representative Sequence MTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYAMWCQERSGKRKRR
Number of Associated Samples 45
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 35.64 %
% of genes near scaffold ends (potentially truncated) 13.86 %
% of genes from short scaffolds (< 2000 bps) 54.46 %
Associated GOLD sequencing projects 34
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (46.535 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(40.594 % of family members)
Environment Ontology (ENVO) Unclassified
(81.188 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(82.178 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 35.62%    β-sheet: 12.33%    Coil/Unstructured: 52.05%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF01501Glyco_transf_8 27.72
PF136402OG-FeII_Oxy_3 16.83
PF09374PG_binding_3 5.94
PF13578Methyltransf_24 2.97
PF00145DNA_methylase 1.98
PF01075Glyco_transf_9 1.98
PF10544T5orf172 0.99
PF05869Dam 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG1442Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferaseCell wall/membrane/envelope biogenesis [M] 27.72
COG5597N-acetylglucosaminyl transferaseCell wall/membrane/envelope biogenesis [M] 27.72
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 1.98
COG0859ADP-heptose:LPS heptosyltransferaseCell wall/membrane/envelope biogenesis [M] 1.98


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.47 %
UnclassifiedrootN/A46.53 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004448|Ga0065861_1176006Not Available565Open in IMG/M
3300004461|Ga0066223_1330300Not Available1137Open in IMG/M
3300004461|Ga0066223_1434193Not Available587Open in IMG/M
3300006805|Ga0075464_10012306All Organisms → Viruses → Predicted Viral4250Open in IMG/M
3300006805|Ga0075464_10014996All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3907Open in IMG/M
3300006805|Ga0075464_10021183All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3365Open in IMG/M
3300006805|Ga0075464_10058706Not Available2144Open in IMG/M
3300006805|Ga0075464_10515381Not Available732Open in IMG/M
3300006805|Ga0075464_11093227Not Available502Open in IMG/M
3300007363|Ga0075458_10059469Not Available1199Open in IMG/M
3300007734|Ga0104986_1648All Organisms → cellular organisms → Bacteria20923Open in IMG/M
3300007734|Ga0104986_1674All Organisms → cellular organisms → Bacteria22308Open in IMG/M
3300007735|Ga0104988_10272All Organisms → cellular organisms → Bacteria12723Open in IMG/M
3300007735|Ga0104988_10891All Organisms → cellular organisms → Bacteria36505Open in IMG/M
3300009068|Ga0114973_10078187All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium1903Open in IMG/M
3300009068|Ga0114973_10267856Not Available917Open in IMG/M
3300009068|Ga0114973_10287358Not Available879Open in IMG/M
3300009068|Ga0114973_10303445Not Available850Open in IMG/M
3300009151|Ga0114962_10211343All Organisms → Viruses → Predicted Viral1127Open in IMG/M
3300009151|Ga0114962_10233277Not Available1057Open in IMG/M
3300009151|Ga0114962_10679436Not Available528Open in IMG/M
3300009152|Ga0114980_10484092Not Available705Open in IMG/M
3300009154|Ga0114963_10026803All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium3814Open in IMG/M
3300009154|Ga0114963_10061290All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium2374Open in IMG/M
3300009154|Ga0114963_10301964Not Available891Open in IMG/M
3300009155|Ga0114968_10033817All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium3400Open in IMG/M
3300009155|Ga0114968_10105140All Organisms → Viruses → Predicted Viral1721Open in IMG/M
3300009155|Ga0114968_10199555Not Available1160Open in IMG/M
3300009155|Ga0114968_10237748Not Available1040Open in IMG/M
3300009159|Ga0114978_10127213All Organisms → Viruses → Predicted Viral1658Open in IMG/M
3300009159|Ga0114978_10233036Not Available1150Open in IMG/M
3300009161|Ga0114966_10137382All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1604Open in IMG/M
3300009180|Ga0114979_10617405Not Available619Open in IMG/M
3300009181|Ga0114969_10593799Not Available608Open in IMG/M
3300009183|Ga0114974_10166368All Organisms → Viruses → Predicted Viral1369Open in IMG/M
3300009183|Ga0114974_10167953All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1361Open in IMG/M
3300009184|Ga0114976_10251314Not Available958Open in IMG/M
3300010160|Ga0114967_10375925Not Available713Open in IMG/M
3300010334|Ga0136644_10002006All Organisms → cellular organisms → Bacteria15802Open in IMG/M
3300011116|Ga0151516_10114Not Available42066Open in IMG/M
3300011116|Ga0151516_10405All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes21171Open in IMG/M
3300012000|Ga0119951_1010056All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3947Open in IMG/M
3300014050|Ga0119952_1016724All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium2589Open in IMG/M
3300014819|Ga0119954_1008423All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2462Open in IMG/M
3300018420|Ga0181563_10414215Not Available767Open in IMG/M
3300021963|Ga0222712_10010601All Organisms → cellular organisms → Bacteria8396Open in IMG/M
3300022746|Ga0228701_1014570All Organisms → Viruses → Predicted Viral2751Open in IMG/M
3300022752|Ga0214917_10004018Not Available16671Open in IMG/M
3300022752|Ga0214917_10005324All Organisms → cellular organisms → Bacteria13787Open in IMG/M
3300022752|Ga0214917_10010688All Organisms → cellular organisms → Bacteria8576Open in IMG/M
3300022752|Ga0214917_10010948All Organisms → cellular organisms → Bacteria8434Open in IMG/M
3300022752|Ga0214917_10019225All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium5686Open in IMG/M
3300022752|Ga0214917_10036857All Organisms → Viruses → Predicted Viral3546Open in IMG/M
3300022752|Ga0214917_10045613All Organisms → Viruses → Predicted Viral3038Open in IMG/M
3300022752|Ga0214917_10053429All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → Prasinovirus → unclassified Prasinovirus → Yellowstone lake phycodnavirus 22705Open in IMG/M
3300022752|Ga0214917_10057786All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium2557Open in IMG/M
3300022752|Ga0214917_10092109All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium1802Open in IMG/M
3300022752|Ga0214917_10096285All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1742Open in IMG/M
3300022752|Ga0214917_10118057All Organisms → Viruses → Predicted Viral1488Open in IMG/M
3300022752|Ga0214917_10145221Not Available1266Open in IMG/M
3300022752|Ga0214917_10159464Not Available1177Open in IMG/M
3300022752|Ga0214917_10173973Not Available1100Open in IMG/M
3300022752|Ga0214917_10199074Not Available990Open in IMG/M
3300022752|Ga0214917_10199254Not Available989Open in IMG/M
3300022752|Ga0214917_10201084Not Available982Open in IMG/M
3300022752|Ga0214917_10349849Not Available632Open in IMG/M
3300023174|Ga0214921_10003621All Organisms → cellular organisms → Bacteria23447Open in IMG/M
3300023174|Ga0214921_10006904All Organisms → cellular organisms → Bacteria15309Open in IMG/M
3300023174|Ga0214921_10007153Not Available14984Open in IMG/M
3300023174|Ga0214921_10016129All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium8440Open in IMG/M
3300023174|Ga0214921_10270740Not Available975Open in IMG/M
3300023174|Ga0214921_10315475Not Available859Open in IMG/M
3300023174|Ga0214921_10341446Not Available803Open in IMG/M
3300023179|Ga0214923_10015186All Organisms → cellular organisms → Bacteria7327Open in IMG/M
3300023179|Ga0214923_10025965All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5033Open in IMG/M
3300023179|Ga0214923_10028870All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium4676Open in IMG/M
3300023179|Ga0214923_10055858All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium2961Open in IMG/M
3300023179|Ga0214923_10084898All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2208Open in IMG/M
3300023179|Ga0214923_10339983Not Available796Open in IMG/M
3300025635|Ga0208147_1050660Not Available1063Open in IMG/M
3300025896|Ga0208916_10005428All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5046Open in IMG/M
3300025896|Ga0208916_10007745All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4203Open in IMG/M
3300025896|Ga0208916_10303552Not Available695Open in IMG/M
3300027712|Ga0209499_1059945All Organisms → Viruses → Predicted Viral1532Open in IMG/M
3300027734|Ga0209087_1209380Not Available743Open in IMG/M
3300027736|Ga0209190_1019775All Organisms → Viruses → Predicted Viral3798Open in IMG/M
3300027736|Ga0209190_1032087All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium2807Open in IMG/M
3300027741|Ga0209085_1009447All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium4931Open in IMG/M
3300027741|Ga0209085_1058075All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium1776Open in IMG/M
3300027749|Ga0209084_1068750Not Available1638Open in IMG/M
3300027749|Ga0209084_1248328Not Available693Open in IMG/M
3300027754|Ga0209596_1024580All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium3524Open in IMG/M
3300027754|Ga0209596_1201197Not Available849Open in IMG/M
3300027759|Ga0209296_1124248Not Available1196Open in IMG/M
3300027770|Ga0209086_10031055All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium3192Open in IMG/M
3300027777|Ga0209829_10004724All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium9449Open in IMG/M
3300027782|Ga0209500_10049741All Organisms → Viruses → Predicted Viral2244Open in IMG/M
3300027971|Ga0209401_1348695Not Available500Open in IMG/M
3300027973|Ga0209298_10164378Not Available926Open in IMG/M
3300031539|Ga0307380_11068956Not Available638Open in IMG/M
3300031673|Ga0307377_10810915Not Available647Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake40.59%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater31.68%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous10.89%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater8.91%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.97%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.98%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater0.99%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.99%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300007734Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015JanEnvironmentalOpen in IMG/M
3300007735Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea ? 2014OctEnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009184Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaGEnvironmentalOpen in IMG/M
3300010160Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaGEnvironmentalOpen in IMG/M
3300010334Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)EnvironmentalOpen in IMG/M
3300011116Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015NovEnvironmentalOpen in IMG/M
3300012000Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007AEnvironmentalOpen in IMG/M
3300014050Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007BEnvironmentalOpen in IMG/M
3300014819Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1011AEnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022746Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17_Aug_MGEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300025635Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025896Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027712Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027736Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027741Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027749Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027770Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027777Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027971Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027973Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0065861_117600613300004448MarineKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYAMWCQERSGKRKRR*
Ga0066223_133030023300004461MarineMTSVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFEDKAKAQDAADLWNAYAMWCQERSGKRKRR*
Ga0066223_143419323300004461MarineMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYAMWCQERSGKRKRR*
Ga0075464_1001230663300006805AqueousMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCQERSGKRKRR*
Ga0075464_1001499673300006805AqueousMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFEDKAKAQDAADLWNAYSMWCQERSGKRKRR*
Ga0075464_1002118373300006805AqueousMTPVRVQQEDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFFDKSKAQDAADLWNCYAAWCQEHSGKRKRR*
Ga0075464_1005870653300006805AqueousMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGRAQEAADLWNAYAMWCQERSGKRKRR*
Ga0075464_1051538123300006805AqueousMTSVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYSMWCQERSGKQKRR*
Ga0075464_1109322723300006805AqueousMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCKERSGKRKRR*
Ga0075458_1005946943300007363AqueousMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGRAQEAADLWNAYAMWCQERSGKRKRR*
Ga0104986_1648243300007734FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGKAQDAANLWNAYAIWCQDRSGKRKRR*
Ga0104986_1674313300007734FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFDNKESAQNAADLWNAYHLWCKDRSGKRKRR*
Ga0104988_10272173300007735FreshwaterMTPVRVQRENGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFDDKAKAQDAADLWNAYAMWCKERGGKRTRR*
Ga0104988_10891323300007735FreshwaterMTPVRVQPENGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKTKAQDAADLWNAYAMWCQDRSGKRKRR*
Ga0114973_1007818763300009068Freshwater LakeMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYALWCKERSGKRKRR*
Ga0114973_1026785623300009068Freshwater LakeMTSVRVQREDEKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCQERSGKRKRR*
Ga0114973_1028735823300009068Freshwater LakeMTPVRVQPEEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYALWCKERSGKRKRR*
Ga0114973_1030344523300009068Freshwater LakeMTPVRVQREDGKWRVTTMAGNPIGPRLWGSVPPNGLPSIEDLFEDKARAQDAADLWNAYSMWCQERSGMRKRR*
Ga0114962_1021134313300009151Freshwater LakeMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYA
Ga0114962_1023327723300009151Freshwater LakeMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCKERSGKRKRR*
Ga0114962_1067943613300009151Freshwater LakeMTSVRVQQEDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYALWCKERSGKRKRR*
Ga0114980_1048409233300009152Freshwater LakeRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNSYAMWCQERSGKRKRR*
Ga0114963_1002680383300009154Freshwater LakeMTSVRVQREDEKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGKAQDAADLWNAYALWCKERSGKRKRR*
Ga0114963_1006129013300009154Freshwater LakeMTSVRVQQEDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFEDKAKAQDAADLWNAYALWCKERSGKRKRR*
Ga0114963_1030196413300009154Freshwater LakeGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYAMWCQERSGKRKRR*
Ga0114968_1003381763300009155Freshwater LakeMTPVRVQPEEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCQERSGKRKRR*
Ga0114968_1010514053300009155Freshwater LakeMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGMAQDAADLWNAYALWCQERSGKRKRR*
Ga0114968_1019955523300009155Freshwater LakeMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNALPSVEDLFEDKSKAQDAADLWNAYALWCKERSGKRKRR*
Ga0114968_1023774823300009155Freshwater LakeMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNSYAMWCKERSVKRKRR*
Ga0114978_1012721353300009159Freshwater LakeMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGRAQDAADLWNAYALWCKERSGKRKRR*
Ga0114978_1023303623300009159Freshwater LakeMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNSYAMWCQERSGKRKRR*
Ga0114966_1013738253300009161Freshwater LakeMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNSYAMWCKERSGKRKRR*
Ga0114979_1061740533300009180Freshwater LakeQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYALWCKERSGKRKRR*
Ga0114969_1059379923300009181Freshwater LakeMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNSYAMWCQERSGKRKRR*
Ga0114974_1016636843300009183Freshwater LakeVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGMAQDAADLWNAYALWCKERSGKRKRR*
Ga0114974_1016795313300009183Freshwater LakeMTPVRVQREDEKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYALWCKERSGKRKRR*
Ga0114976_1025131423300009184Freshwater LakeMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGMAQDAADLWNAYALWCKERSGKRKRR*
Ga0114967_1037592533300010160Freshwater LakeMTLVRVQREDSKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFSEKSDAQNAADLWNAYAMWCQERSGKRKRR*
Ga0136644_10002006143300010334Freshwater LakeMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYAMWCQERSGKRKRR*
Ga0151516_10114353300011116FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYAMWCKDRSGKRKRK*
Ga0151516_10405123300011116FreshwaterMTPVRVQPEEGKWRVTTMAGNPIGPRLWGAEPPNGLPPIEDLFDDKGKAQDAADLWNAYAMWCKDRSGKRKRR*
Ga0119951_101005623300012000FreshwaterMTPVRVQREGEKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGRAQEAADLWNAYAMWCQERSGKRKRR*
Ga0119952_101672473300014050FreshwaterMTPVRVQREGEKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNCYHEWCKERSGKRKRR*
Ga0119954_100842323300014819FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFSEKSDAQNAADLWNAYAMWCQERSGKRKRK*
Ga0181563_1041421533300018420Salt MarshMTPVRVQPEEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFEDKTKAQDAADLWNAYAMWCQERSGKRKRK
Ga0222712_10010601143300021963Estuarine WaterMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYSMWCQERSGKRKRR
Ga0228701_101457023300022746FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFEDKTKAQDAADLWNAYAMWCQERSGKRKRK
Ga0214917_10004018273300022752FreshwaterMTPVRVQQEDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFSEKSDAQNAADLWNAYALWCKERSGKRKRR
Ga0214917_10005324153300022752FreshwaterMTPVRVQRENGKWRVTTMAGNPIGPRLWGAIPPNGLPSIEDLFDDKTKAQEAADLWNAYAAWCQERSGKRKRR
Ga0214917_1001068853300022752FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPPIDDLFEDKSKAQDAADLWNCYASWCQERSGKRKRR
Ga0214917_1001094823300022752FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFDDKGKAQDAADLWNAYAMWCKDRSGKRKRK
Ga0214917_10019225113300022752FreshwaterMTPVRIQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKSKAQDAADLWNCYAAWCQDRSGKRKRR
Ga0214917_1003685743300022752FreshwaterMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFEDKAKAQDAADLWNAYALWCRERSGKRKRR
Ga0214917_1004561343300022752FreshwaterMTPVRVQHEEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGRAQDAADLWNAYALWCKERSGKRKRR
Ga0214917_1005342973300022752FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFEDKSKAQDAADLWNAYAAWCQERSGKRKRR
Ga0214917_1005778633300022752FreshwaterMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKTMAQDAADLWNAYAMWCQERSGKRKRK
Ga0214917_1009210913300022752FreshwaterMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKTKAQDAADLWNAYAMWCQERSGKRRRK
Ga0214917_1009628543300022752FreshwaterMTPVRVQPEEGKWRVTTMAGNPIGPRLWGAEPPNGLPPIEDLFDDKGKAQDAADLWNAYAMWCKDRSGKRKRK
Ga0214917_1011805743300022752FreshwaterMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYAMWCQERSGKRKRR
Ga0214917_1014522133300022752FreshwaterMTSVRVQQEEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCKERSGKRKRR
Ga0214917_1015946423300022752FreshwaterMTPVRVQREGEKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGKAQDAADLWNCYHEWCKERSGKRKRR
Ga0214917_1017397333300022752FreshwaterMTPVRVQREDGRWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYALWCKERSGKRKRR
Ga0214917_1019907433300022752FreshwaterMTPVRVQREGEKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNCYHEWCKERSGKRKRR
Ga0214917_1019925423300022752FreshwaterMTPVRVQLEEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYALWCKERSGKRKRR
Ga0214917_1020108423300022752FreshwaterMTSVRVQREDGRWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCKERSGKRKRR
Ga0214917_1034984933300022752FreshwaterTWSMTPVRIQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYSMWCQERSGKRKRR
Ga0214921_10003621273300023174FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYAMWCQERSGKRKRR
Ga0214921_10006904113300023174FreshwaterMTPVRVQREEGKWRVTTMAGNPIGPRLWGTVPPNGLPSIEDLFDDKAKAQDAADLWNAYAMWCQERSGKRKRR
Ga0214921_1000715353300023174FreshwaterMTSVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYAMWCQERSGKRKRR
Ga0214921_10016129123300023174FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPPIDDLFKDKSKAQDAADLWNCYAAWCQDRSGKRKRR
Ga0214921_1027074013300023174FreshwaterTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCQERSGKRKRR
Ga0214921_1031547523300023174FreshwaterMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCQERSGKRKRR
Ga0214921_1034144623300023174FreshwaterMTPVRVQREQGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYSMWCQERSGKRKRR
Ga0214923_10015186143300023179FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFSEKSDAQNAADLWNAYAMWCQDRSGKRKRR
Ga0214923_1002596563300023179FreshwaterMTPVRIQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYSMWCQERSGKRKRR
Ga0214923_1002887023300023179FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFEDKGKAQDAADLWNAYAMWCQQHSGKRKRK
Ga0214923_1005585823300023179FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAIPPNGLPPIDDLFEDKSKAQDAADLWNCYAAWCQDRSGKRKRR
Ga0214923_1008489843300023179FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFSEKSDAQNAADLWNAYAMWCQERSGKRKRK
Ga0214923_1033998323300023179FreshwaterMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPPIDDLFEDKSIAQDAADLWNCYAAWCQDRSGKRKRR
Ga0208147_105066023300025635AqueousMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGRAQEAADLWNAYAMWCQERSGKRKRR
Ga0208916_10005428103300025896AqueousMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFEDKAKAQDAADLWNAYSMWCQERSGKRKRR
Ga0208916_1000774573300025896AqueousMTPVRVQQEDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFFDKSKAQDAADLWNCYAAWCQERSGKRKRR
Ga0208916_1030355223300025896AqueousMTPVRVQREDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCKERSGKRKRR
Ga0209499_105994543300027712Freshwater LakeGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCQERSGKRKRR
Ga0209087_120938023300027734Freshwater LakeMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGMAQDAADLWNAYALWCKERSGKRKRR
Ga0209190_101977563300027736Freshwater LakeMTSVRVQREDEKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCQERSGKRKRR
Ga0209190_103208773300027736Freshwater LakeMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYALWCKERSGKRKRR
Ga0209085_100944773300027741Freshwater LakeMTSVRVQREDEKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGKAQDAADLWNAYALWCKERSGKRKRR
Ga0209085_105807523300027741Freshwater LakeMTSVRVQQEDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIDDLFEDKAKAQDAADLWNAYALWCKERSGKRKRR
Ga0209084_106875023300027749Freshwater LakeMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCKERSGKRKRR
Ga0209084_124832823300027749Freshwater LakeMTSVRVQQEDGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYALWCKERSGKRKRR
Ga0209596_102458063300027754Freshwater LakeMTPVRVQPEEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNAYALWCQERSGKRKRR
Ga0209596_120119723300027754Freshwater LakeMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNSYAMWCKERSVKRKRR
Ga0209296_112424813300027759Freshwater LakeTRSMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKGKAQDAADLWNAYALWCKERSGKRKRR
Ga0209086_1003105543300027770Freshwater LakeMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGMAQDAADLWNAYALWCQERSGKRKRR
Ga0209829_10004724133300027777Freshwater LakeMTSVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGMAQDAADLWNAYAMWCQERSGKRKRR
Ga0209500_1004974153300027782Freshwater LakeMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFEDKAKAQDAADLWNSYAMWCQERSGKRKRR
Ga0209401_134869513300027971Freshwater LakeMTPVRVQREDGKWRVTTMAGNPIGPRLWGSVPPNGLPSIEDLFEDKARAQDAADLWNAYSMWCQERSGK
Ga0209298_1016437823300027973Freshwater LakeMTPVRVQREEGKWRVTTMAGNPIGPRLWGAVPPNGLPSIEDLFDDKGRAQDAADLWNAYAMWCQERSGKRKRR
Ga0307380_1106895623300031539SoilMTPVRVQPEEGKWRVTTMAGNPIGPRLWGAEPPNGLPPIEDLFDDKGRAQDAADLWNAYAMWCKDRSGKRKRK
Ga0307377_1081091523300031673SoilMTPVRVQPEEGKWRVTTMAGNPIGPRLWGAEPPNGLPPIEDLFDDKGRAQDATDLWNAYAMWCKDRSGKRKRK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.