NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F102815

Metagenome / Metatranscriptome Family F102815

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F102815
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 63 residues
Representative Sequence MRSPEELFLDAVNAYKAWVACGKDFVNHAHLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLELIK
Number of Associated Samples 58
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Viruses
% of genes with valid RBS motifs 90.10 %
% of genes near scaffold ends (potentially truncated) 26.73 %
% of genes from short scaffolds (< 2000 bps) 61.39 %
Associated GOLD sequencing projects 43
AlphaFold2 3D model prediction Yes
3D model pTM-score0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Duplodnaviria (42.574 % of family members)
NCBI Taxonomy ID 2731341
Taxonomy All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(68.317 % of family members)
Environment Ontology (ENVO) Unclassified
(83.168 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(87.129 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 61.29%    β-sheet: 0.00%    Coil/Unstructured: 38.71%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF05866RusA 42.57
PF03796DnaB_C 8.91
PF09723Zn-ribbon_8 1.98
PF13730HTH_36 0.99
PF01551Peptidase_M23 0.99
PF02467Whib 0.99
PF05065Phage_capsid 0.99
PF05869Dam 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG4570Holliday junction resolvase RusA (prophage-encoded endonuclease)Replication, recombination and repair [L] 42.57
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 8.91
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 8.91
COG4653Predicted phage phi-C31 gp36 major capsid-like proteinMobilome: prophages, transposons [X] 0.99


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.39 %
UnclassifiedrootN/A38.61 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002930|Water_104465All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2180Open in IMG/M
3300003490|JGI25926J51410_1055126Not Available680Open in IMG/M
3300004448|Ga0065861_1051941All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2795Open in IMG/M
3300004460|Ga0066222_1144152Not Available668Open in IMG/M
3300004461|Ga0066223_1205698Not Available593Open in IMG/M
3300004774|Ga0007794_10213732Not Available574Open in IMG/M
3300006805|Ga0075464_10260641All Organisms → Viruses → Predicted Viral1038Open in IMG/M
3300008450|Ga0114880_1051268All Organisms → Viruses → Predicted Viral1743Open in IMG/M
3300008962|Ga0104242_1092323All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage501Open in IMG/M
3300009068|Ga0114973_10018229All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4399Open in IMG/M
3300009068|Ga0114973_10026610All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes3534Open in IMG/M
3300009068|Ga0114973_10047575All Organisms → Viruses → Predicted Viral2539Open in IMG/M
3300009068|Ga0114973_10456972Not Available664Open in IMG/M
3300009151|Ga0114962_10008299All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage7830Open in IMG/M
3300009151|Ga0114962_10119752All Organisms → Viruses → Predicted Viral1616Open in IMG/M
3300009151|Ga0114962_10269804Not Available962Open in IMG/M
3300009151|Ga0114962_10382410Not Available765Open in IMG/M
3300009151|Ga0114962_10699254Not Available519Open in IMG/M
3300009154|Ga0114963_10018229All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4690Open in IMG/M
3300009154|Ga0114963_10130179All Organisms → Viruses → Predicted Viral1511Open in IMG/M
3300009154|Ga0114963_10302653Not Available890Open in IMG/M
3300009154|Ga0114963_10331912Not Available839Open in IMG/M
3300009154|Ga0114963_10350002Not Available811Open in IMG/M
3300009155|Ga0114968_10004662All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage10194Open in IMG/M
3300009155|Ga0114968_10060279Not Available2410Open in IMG/M
3300009155|Ga0114968_10346823Not Available820Open in IMG/M
3300009155|Ga0114968_10352953Not Available811Open in IMG/M
3300009155|Ga0114968_10370892Not Available786Open in IMG/M
3300009158|Ga0114977_10019597All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4251Open in IMG/M
3300009160|Ga0114981_10322936Not Available836Open in IMG/M
3300009160|Ga0114981_10385825Not Available755Open in IMG/M
3300009161|Ga0114966_10077517All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2279Open in IMG/M
3300009163|Ga0114970_10123280Not Available1582Open in IMG/M
3300009164|Ga0114975_10004662All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage8960Open in IMG/M
3300009181|Ga0114969_10235342Not Available1108Open in IMG/M
3300009181|Ga0114969_10771056All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage512Open in IMG/M
3300009182|Ga0114959_10112566All Organisms → Viruses → Predicted Viral1481Open in IMG/M
3300009184|Ga0114976_10016285All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4567Open in IMG/M
3300009184|Ga0114976_10533477Not Available602Open in IMG/M
3300009187|Ga0114972_10578943Not Available629Open in IMG/M
3300009684|Ga0114958_10128034All Organisms → Viruses → Predicted Viral1296Open in IMG/M
3300010157|Ga0114964_10538913Not Available548Open in IMG/M
3300010158|Ga0114960_10318786All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage776Open in IMG/M
3300010160|Ga0114967_10088897All Organisms → Viruses → Predicted Viral1822Open in IMG/M
3300010885|Ga0133913_10230984All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4919Open in IMG/M
3300010885|Ga0133913_10671551All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2714Open in IMG/M
3300011114|Ga0151515_11106All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage10047Open in IMG/M
3300011115|Ga0151514_11028All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage10807Open in IMG/M
3300011268|Ga0151620_1028506Not Available1912Open in IMG/M
3300012000|Ga0119951_1057473All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1076Open in IMG/M
3300014050|Ga0119952_1007308All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4798Open in IMG/M
3300019784|Ga0181359_1000158All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage13760Open in IMG/M
3300021438|Ga0213920_1007997All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes3412Open in IMG/M
3300022746|Ga0228701_1078829Not Available717Open in IMG/M
3300022752|Ga0214917_10004201All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage16180Open in IMG/M
3300022752|Ga0214917_10035396All Organisms → Viruses → Predicted Viral3646Open in IMG/M
3300022752|Ga0214917_10054605All Organisms → Viruses → Predicted Viral2662Open in IMG/M
3300023174|Ga0214921_10002541All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage29500Open in IMG/M
3300023174|Ga0214921_10044221All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4045Open in IMG/M
3300023174|Ga0214921_10151737Not Available1569Open in IMG/M
3300023174|Ga0214921_10183572Not Available1342Open in IMG/M
3300023174|Ga0214921_10228336Not Available1122Open in IMG/M
3300027708|Ga0209188_1023753All Organisms → Viruses → Predicted Viral3068Open in IMG/M
3300027708|Ga0209188_1105006Not Available1127Open in IMG/M
3300027712|Ga0209499_1054648All Organisms → Viruses → Predicted Viral1630Open in IMG/M
3300027712|Ga0209499_1067484All Organisms → Viruses → Predicted Viral1420Open in IMG/M
3300027734|Ga0209087_1005301All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6917Open in IMG/M
3300027736|Ga0209190_1009423All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5904Open in IMG/M
3300027736|Ga0209190_1010453All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5556Open in IMG/M
3300027741|Ga0209085_1009596All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4887Open in IMG/M
3300027741|Ga0209085_1048875Not Available1962Open in IMG/M
3300027741|Ga0209085_1056606All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1804Open in IMG/M
3300027741|Ga0209085_1097038All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1302Open in IMG/M
3300027741|Ga0209085_1204427Not Available801Open in IMG/M
3300027741|Ga0209085_1210500Not Available785Open in IMG/M
3300027747|Ga0209189_1006177All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage7437Open in IMG/M
3300027747|Ga0209189_1049640All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2037Open in IMG/M
3300027749|Ga0209084_1051227All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1984Open in IMG/M
3300027749|Ga0209084_1354665Not Available537Open in IMG/M
3300027754|Ga0209596_1047030All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2281Open in IMG/M
3300027754|Ga0209596_1101048All Organisms → Viruses → Predicted Viral1361Open in IMG/M
3300027754|Ga0209596_1362437All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage555Open in IMG/M
3300027760|Ga0209598_10003317All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage12215Open in IMG/M
3300027770|Ga0209086_10013944All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5289Open in IMG/M
3300027777|Ga0209829_10154323All Organisms → Viruses → Predicted Viral1046Open in IMG/M
3300027777|Ga0209829_10195842Not Available886Open in IMG/M
3300027963|Ga0209400_1003721All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes11035Open in IMG/M
3300027971|Ga0209401_1020229All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes3408Open in IMG/M
3300027971|Ga0209401_1136327All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage972Open in IMG/M
3300028392|Ga0304729_1043698All Organisms → Viruses → Predicted Viral1723Open in IMG/M
3300028392|Ga0304729_1051904All Organisms → Viruses → Predicted Viral1537Open in IMG/M
3300028392|Ga0304729_1149775All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage752Open in IMG/M
3300028392|Ga0304729_1182865Not Available657Open in IMG/M
3300028394|Ga0304730_1134525All Organisms → Viruses → Predicted Viral1016Open in IMG/M
3300031707|Ga0315291_10268487Not Available1693Open in IMG/M
3300031999|Ga0315274_10333936Not Available1791Open in IMG/M
3300032092|Ga0315905_10018579All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage7034Open in IMG/M
3300032092|Ga0315905_10859413Not Available781Open in IMG/M
3300032118|Ga0315277_10402221Not Available1405Open in IMG/M
3300032156|Ga0315295_10161511All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2233Open in IMG/M
3300032516|Ga0315273_11016095Not Available1060Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake68.32%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater7.92%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater4.95%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment4.95%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.97%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake1.98%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.98%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater1.98%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.99%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.99%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.99%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.99%
Estuary WaterEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002930Estuary water microbial communities from Pearl Estuary, Zhujiang, ChinaEnvironmentalOpen in IMG/M
3300003490Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SNEnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300004774Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5MEnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300008962Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5EnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009160Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009182Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaGEnvironmentalOpen in IMG/M
3300009184Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaGEnvironmentalOpen in IMG/M
3300009187Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaGEnvironmentalOpen in IMG/M
3300009684Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaGEnvironmentalOpen in IMG/M
3300010157Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaGEnvironmentalOpen in IMG/M
3300010158Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaGEnvironmentalOpen in IMG/M
3300010160Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaGEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011114Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016FebEnvironmentalOpen in IMG/M
3300011115Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016MayEnvironmentalOpen in IMG/M
3300011268Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555EnvironmentalOpen in IMG/M
3300012000Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007AEnvironmentalOpen in IMG/M
3300014050Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007BEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300021438Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MGEnvironmentalOpen in IMG/M
3300022746Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17_Aug_MGEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300027708Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027712Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027736Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027741Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027747Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027749Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027760Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027770Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027777Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027963Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027971Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300028392Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)EnvironmentalOpen in IMG/M
3300028394Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Water_10446563300002930Estuary WaterMRNPEELFLEAINAYRAWIDCGKDFLNHSDLYDVWDDAVMAYAQVVHLQRNRAVHQILQGLEIVR*
JGI25926J51410_105512613300003490Freshwater LakeMRSPEELFLDAVDAYKAWVACGKDFVNHAHLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLDLVQ*
Ga0065861_105194123300004448MarineMKSPEELFLEAITAYRVWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELVK*
Ga0066222_114415233300004460MarineMNTEELFLKAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAIHLQRNRAV
Ga0066223_120569833300004461MarineMNTEELFLKAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVHLQRNRAV
Ga0007794_1021373223300004774FreshwaterMNTEELFLQAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVHLQRNRAVHQILQGLELIK*
Ga0075464_1026064133300006805AqueousMRSPEELFLDAVNAYKAWVACGKDFVNHAHLYDVWDDAVMAYAQAGHLQRNRAVHQILQGLELIK*
Ga0114880_105126833300008450Freshwater LakeMRSPEELFLDAVNAYKAWVACGKDFVNHAHLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLDLVQ*
Ga0104242_109232313300008962FreshwaterMRSPEELFLEAIEAYKAWVACGKDFMNHAHLFDVWDDAVTAYGQSVFLERNRAVHQILQGLDVVK*
Ga0114973_1001822973300009068Freshwater LakeMNTEELFLQAINAYKAWINTGKDFVNHADLYDVWDDAVLAYAQAVHLQRNRAVHQILQGLELIK*
Ga0114973_10026610113300009068Freshwater LakeMRLPEELFLDAVNAYKAWVACGKDFLNHAQLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLDLVQ*
Ga0114973_1004757573300009068Freshwater LakeMNTEELFLQAINAYKAWINTGKDFVNHANLYDVWDDAVMAYAQAVHLQRNRAVHQILQGLELIK*
Ga0114973_1045697213300009068Freshwater LakeMTTEELFLDAVNAYKAWVACGKDFLNHAHLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLDLVQ*
Ga0114962_1000829973300009151Freshwater LakeMQNSTGEELFLKAIEAYKAWIATGKDFLNHSDLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLEIIK*
Ga0114962_1011975213300009151Freshwater LakeMNTEELFLKAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVHLQRNRAVH
Ga0114962_1026980423300009151Freshwater LakeMNTEELFLQAINAYRVWINTGKDFVNHADLYDVWDDAVMAYAQAVNLQRNRAVHQILQGLELIK*
Ga0114962_1038241013300009151Freshwater LakeMRSPEELFLAAITAYRAWVNCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELVK*
Ga0114962_1069925413300009151Freshwater LakeMRSPEELFLEAISAYRAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELVK*
Ga0114963_1001822963300009154Freshwater LakeMQNSTGEELFLKAIEAYKAWIATGKDFVNHSDLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLEVIK*
Ga0114963_1013017943300009154Freshwater LakeMNTEELFLKAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVNLQRNRAVHQILQGLELIK*
Ga0114963_1030265323300009154Freshwater LakeMKSPEELFLDAITAYRAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELVK*
Ga0114963_1033191213300009154Freshwater LakeMRSPEELFLDAITAYRAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQV
Ga0114963_1035000233300009154Freshwater LakeMNTEELFLQAINAYRAWINTGKDFVNHADLYDVWDDAVMAYAQAIHLQRNRAVHQILQGLELIK*
Ga0114968_10004662133300009155Freshwater LakeMRSPEELFLEAIEAYKAWVACGKDFVNHANLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELIK*
Ga0114968_1006027933300009155Freshwater LakeMRSSEELFLEAITAYRAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELVK*
Ga0114968_1034682313300009155Freshwater LakeMNTEELFLQAINAYKAWINTGKDFVNHANLYDVWDDAVMAYAQAVHLQRNRAVH
Ga0114968_1035295313300009155Freshwater LakeMNIEELFLQAINAYKAWINTGKDFVNHANLYDVWDDAVMAYAQAVHLQRNRAVH
Ga0114968_1037089213300009155Freshwater LakeMRSPEELFLDAVNAYKAWVACGKDFLNHAHLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLELIK*
Ga0114977_10019597143300009158Freshwater LakeMRNTEELFLDAVNAYKAWVATGKDFVNHADLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLEIVK*
Ga0114981_1032293623300009160Freshwater LakeMRSPEELFLDAINAYKAWLAVDKDFLNHSDLFEVWDSAIMAYAQSIFITRNRAVCHILQGLEMVK*
Ga0114981_1038582513300009160Freshwater LakeMRSPEELFLDAVNAYKAWVACGKDFLNHAHLFEAWDDAVTAYGQAVFLERNRAVHQVLQGLELIK*
Ga0114966_1007751753300009161Freshwater LakeMRSPEELFLEAVEAYKAWVACGKDFVNHAHLFDIWDDAVVAYGQSVFLERNRAVHQVLQGLDMVK*
Ga0114970_1012328063300009163Freshwater LakeYRRELFKGRQLMNTEELFLQAINAYKAWINTGKDFVNHANLYDVWDDAVMAYAQAVHLQRNRAVHQILQGLELIK*
Ga0114975_10004662143300009164Freshwater LakeMRSPEELFLEAITAYRAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELVK*
Ga0114969_1023534213300009181Freshwater LakeRSSEELFLEAITAYRAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELVK*
Ga0114969_1077105613300009181Freshwater LakeRSPEELFLEAIEAYKAWVACGKDFVNHANLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELIK*
Ga0114959_1011256613300009182Freshwater LakeFKGRQLMNTEELFLQAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVHLQRNRAVHQILQGLELIK*
Ga0114976_1001628533300009184Freshwater LakeMRNPEELFLDAVNAYKAWVACGKDFVNHAHLYDVWDDAVVAYGQSIFLERNRAVHQVLQGLDLVQ*
Ga0114976_1053347723300009184Freshwater LakeMRSPEELFLDAVNAYKAWVACGKDFVNHAHLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLELIK*
Ga0114972_1057894313300009187Freshwater LakeMTTEELFLDAVNAYKAWVACGKDFLNHAQLFDVWDDAVTAYGQAVFLERNRAVHQVLQGL
Ga0114958_1012803413300009684Freshwater LakeMNTEELFLQAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVHLQRNRAVH
Ga0114964_1053891313300010157Freshwater LakeMRSPEELFLEAITAYRAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNR
Ga0114960_1031878613300010158Freshwater LakeMNTEELFLKAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVHLQRNRAVHQILQGLELIK*
Ga0114967_1008889733300010160Freshwater LakeMRSPEELFLEAITAYRAWVNCGKDFLNHADLFDVWDDAVTAYGRSVFLERNRAVHQVLQGLELVK*
Ga0133913_10230984133300010885Freshwater LakeMRNPEELFLDAVNAYKAWVATGKDFMNHADLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLEIVK*
Ga0133913_1067155143300010885Freshwater LakeMQNSTGEELFLKAIEAYKAWIATGKDFLNHSDLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLEVIK*
Ga0151515_11106103300011114FreshwaterMRDPEMLFLEAVNAYKAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQILQGLELIK*
Ga0151514_11028133300011115FreshwaterMQNSTGEELFLKAIEAYKAWINCGKDFLNHSDLFDVWDDAVAAYGQSVFLERNRAIHQVLQGLEVIK*
Ga0151620_102850633300011268FreshwaterMRSPEELFLDAVNAYKAWVACGKDFLNHAHLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLDLVQ*
Ga0119951_105747333300012000FreshwaterMRSPEELFLEAIEAYKAWVACGKDFMNHAHLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLDVVK*
Ga0119952_100730883300014050FreshwaterMRSPEELFLEAIEAYKAWVACGKDFLNHAHLFEAWDDAVTAYGQSVFLERNRAVHQVLQGLDVVK*
Ga0181359_1000158163300019784Freshwater LakeMRSPEELFLDAVDAYKAWVACGKDFVNHAHLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLDLVQ
Ga0213920_1007997113300021438FreshwaterMNTEELFLQAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAIHLQRNRAVHQILQGLELIK
Ga0228701_107882933300022746FreshwaterIMTTEELFLQAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAIHLQRNRAVHQILQGLELIK
Ga0214917_10004201233300022752FreshwaterMRSPEELFLDAVNAYKAWVACGKDFLNHAHLFEAWDDAVTAYGQSVFLERNRAVHQVLQGLEMIK
Ga0214917_1003539673300022752FreshwaterMRNPEELFLEAIEAYKAWVACGKDFLNHAHLFEAWDDAVTAYGQSVFLERNRAVHQVLQGLDVVK
Ga0214917_1005460523300022752FreshwaterMRSPEELFLEAIEAYKAWVACGKDFMNHAHLFDVWDDAVTAYGQSVFLERNRAVHQILQGLDVVK
Ga0214921_1000254153300023174FreshwaterMRTPEELFLDAINTYKAWLAVGKDFLNHSDLFEIWDCAITAYAQSVFITRNRAVSHVLQGLEVMN
Ga0214921_1004422173300023174FreshwaterMRSPEELFLDAVNAYKAWVACGKDFVNHAHLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLELIK
Ga0214921_1015173723300023174FreshwaterMRNPEELFLDAVNAYKAWVACGKDFLNHAYLFDIWDDAVTAYGQSVFLERNRAVHQVLQGLDVVK
Ga0214921_1018357233300023174FreshwaterMRTPEELFLDAINAYKKWLDVSKDFLNHSDLFEIWDSAINAYAQSVFITRNRAVSHVLQGLEVMN
Ga0214921_1022833653300023174FreshwaterMREPEELFLDAVTAYKAWVACGKDFLNHADLFEAWDDAVTAYGQSVFLERNRAVHQILQGLELIK
Ga0209188_102375363300027708Freshwater LakeMNTEELFLQAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVHLQRNRAVHQILQGLELIK
Ga0209188_110500613300027708Freshwater LakeMNTEELFLQAINAYRVWINTGKDFVNHADLYDVWDDAVMAYAQAVNLQRNRAVHQILQGLELIK
Ga0209499_105464853300027712Freshwater LakeMNTEELFLKAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVHLQRNRAVHQ
Ga0209499_106748453300027712Freshwater LakeMNTEELFLQAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVHLQRNRAVHQ
Ga0209087_100530183300027734Freshwater LakeMRNPEELFLDAVNAYKAWVATGKDFMNHADLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLEIVK
Ga0209190_100942393300027736Freshwater LakeMNTEELFLQAINAYKAWINTGKDFVNHADLYDVWDDAVLAYAQAVHLQRNRAVHQILQGLELIK
Ga0209190_101045393300027736Freshwater LakeMNTEELFLQAINAYKAWINTGKDFVNHANLYDVWDDAVMAYAQAVHLQRNRAVHQILQGLELIK
Ga0209085_1009596163300027741Freshwater LakeMRSPEELFLEAITAYRAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELVK
Ga0209085_104887543300027741Freshwater LakeMKSPEELFLDAITAYRAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELVK
Ga0209085_105660663300027741Freshwater LakeMRSPEELFLDAITAYRAWVNCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELVK
Ga0209085_109703833300027741Freshwater LakeMQNSTGEELFLKAIEAYKAWIATGKDFVNHSDLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLEVIK
Ga0209085_120442713300027741Freshwater LakeMNTEELFLQAINAYRAWINTGKDFVNHADLYDVWDDAVMAYAQAIHLQRNRAVHQILQGLELIK
Ga0209085_121050023300027741Freshwater LakeMNTEELFLKAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVNLQRNRAVHQILQGLELIK
Ga0209189_100617783300027747Freshwater LakeMRSPEELFLAAITAYRAWVNCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELVK
Ga0209189_104964033300027747Freshwater LakeMQNSTGEELFLKAIEAYKAWIATGKDFLNHSDLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLEVIK
Ga0209084_105122783300027749Freshwater LakeMQNSTGEELFLKAIEAYKAWIATGKDFLNHSDLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLEIIK
Ga0209084_135466513300027749Freshwater LakeMNTEELFLQAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVHLQRNRAVHQILQG
Ga0209596_104703053300027754Freshwater LakeMRSSEELFLEAITAYRAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELVK
Ga0209596_110104843300027754Freshwater LakeMRSPEELFLEAITAYRAWVNCGKDFLNHADLFDVWDDAVTAYGRSVFLERNRAVHQVLQGLELVK
Ga0209596_136243723300027754Freshwater LakeLFLEAVEAYKAWVACGKDFVNHAHLFDIWDDAVVAYGQSVFLERNRAVHQVLQGLDMVK
Ga0209598_10003317113300027760Freshwater LakeMRLPEELFLDAVNAYKAWVACGKDFLNHAQLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLDLVQ
Ga0209086_10013944103300027770Freshwater LakeMRSPEELFLEAVEAYKAWVACGKDFVNHAHLFDIWDDAVVAYGQSVFLERNRAVHQVLQGLDMVK
Ga0209829_1015432343300027777Freshwater LakeMKSPEELFLDAITAYRAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQ
Ga0209829_1019584243300027777Freshwater LakeLFLQAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVHLQRNRAVHQILQGLELIK
Ga0209400_1003721133300027963Freshwater LakeMRSPEELFLEAIEAYKAWVACGKDFVNHANLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELIK
Ga0209401_102022933300027971Freshwater LakeMTTEELFLDAVNAYKAWVACGKDFLNHAHLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLDLVQ
Ga0209401_113632713300027971Freshwater LakeMTTEELFLDAVNAYKAWVACGKDFLNHAHLFDVWDDAVTAYGQAVFLERNRAVHQVLQGL
Ga0304729_104369813300028392Freshwater LakeMNTEELFLQAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVNLQRNRAVH
Ga0304729_105190413300028392Freshwater LakeNAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVHLQRNRAVHQILQGLELIK
Ga0304729_114977513300028392Freshwater LakeMNTEELFLKAINAYKAWINTGKDFVNHADLYDVWDDAVMAYAQAVNLQRNRAVH
Ga0304729_118286533300028392Freshwater LakeMRSPEELFLDAITAYRAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQG
Ga0304730_113452513300028394Freshwater LakeMKSPEELFLEAITAYRAWINCGKDFLNHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQG
Ga0315291_1026848733300031707SedimentMRSPEELFLDAVDAYKAWIATGKDFINHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELTK
Ga0315274_1033393673300031999SedimentMMREPEELFLDAIAAYKAWIACGKDFLNHADLYDVWDDAVVAYGQSIFLERNRAVHQVLQGLEVIR
Ga0315905_10018579133300032092FreshwaterMRSPEELFLDAVNAYKAWVACGKDFVNHAHLFDVWDDAVTAYGQAVFLERNRAVHQVLQGLDLVQ
Ga0315905_1085941323300032092FreshwaterMRNPEDLFLDAVNAYKAWVACGKDFVNHAHLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELIK
Ga0315277_1040222143300032118SedimentMRSPEELFLEAVDAYKAWIATGKDFINHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELTK
Ga0315295_1016151153300032156SedimentMRSPEELFLDAVNAYKAWIATGKDFINHADLFDVWDDAVTAYGQSVFLERNRAVHQVLQGLELTK
Ga0315273_1101609513300032516SedimentMMRSPEELFLDAVNAYKAWIATGKDFINHADLFDVWDDAVTAYGQSVFLERNRAV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.