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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F102765 |
| Family Type | Metagenome |
| Number of Sequences | 101 |
| Average Sequence Length | 99 residues |
| Representative Sequence | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR |
| Number of Associated Samples | 83 |
| Number of Associated Scaffolds | 101 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Bacteria |
| % of genes with valid RBS motifs | 80.20 % |
| % of genes near scaffold ends (potentially truncated) | 27.72 % |
| % of genes from short scaffolds (< 2000 bps) | 78.22 % |
| Associated GOLD sequencing projects | 79 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
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| Most Common Taxonomy | |
|---|---|
| Group | Bacteria (56.436 % of family members) |
| NCBI Taxonomy ID | 2 |
| Taxonomy | All Organisms → cellular organisms → Bacteria |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (34.654 % of family members) |
| Environment Ontology (ENVO) | Unclassified (35.644 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (39.604 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Transmembrane (alpha-helical) | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 66.34% β-sheet: 0.00% Coil/Unstructured: 33.66% | Feature Viewer |
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| Pfam ID | Name | % Frequency in 101 Family Scaffolds |
|---|---|---|
| PF01264 | Chorismate_synt | 54.46 |
| PF01202 | SKI | 30.69 |
| PF01761 | DHQ_synthase | 3.96 |
| PF01220 | DHquinase_II | 2.97 |
| PF02036 | SCP2 | 0.99 |
| PF05960 | DUF885 | 0.99 |
| PF03551 | PadR | 0.99 |
| PF02018 | CBM_4_9 | 0.99 |
| COG ID | Name | Functional Category | % Frequency in 101 Family Scaffolds |
|---|---|---|---|
| COG0082 | Chorismate synthase | Amino acid transport and metabolism [E] | 54.46 |
| COG0757 | 3-dehydroquinate dehydratase | Amino acid transport and metabolism [E] | 2.97 |
| COG1695 | DNA-binding transcriptional regulator, PadR family | Transcription [K] | 0.99 |
| COG1733 | DNA-binding transcriptional regulator, HxlR family | Transcription [K] | 0.99 |
| COG1846 | DNA-binding transcriptional regulator, MarR family | Transcription [K] | 0.99 |
| COG4805 | Uncharacterized conserved protein, DUF885 family | Function unknown [S] | 0.99 |
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| Name | Rank | Taxonomy | Distribution |
| All Organisms | root | All Organisms | 56.44 % |
| Unclassified | root | N/A | 43.56 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 34.65% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 13.86% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 9.90% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 7.92% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 6.93% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 3.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.97% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 2.97% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.98% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.98% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.99% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.99% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.99% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 0.99% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.99% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.99% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.99% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.99% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.99% |
| Visualization |
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300003373 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Host-Associated | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
| 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
| 3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
| 3300009840 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A | Environmental | Open in IMG/M |
| 3300010036 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26 | Environmental | Open in IMG/M |
| 3300010037 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25 | Environmental | Open in IMG/M |
| 3300010038 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106 | Environmental | Open in IMG/M |
| 3300010040 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55 | Environmental | Open in IMG/M |
| 3300010041 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A | Environmental | Open in IMG/M |
| 3300010042 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B | Environmental | Open in IMG/M |
| 3300010166 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27 | Environmental | Open in IMG/M |
| 3300014487 | Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG | Environmental | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300018027 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex | Environmental | Open in IMG/M |
| 3300018051 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1 | Environmental | Open in IMG/M |
| 3300018054 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1 | Environmental | Open in IMG/M |
| 3300018067 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex | Environmental | Open in IMG/M |
| 3300018072 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2 | Environmental | Open in IMG/M |
| 3300018074 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2 | Environmental | Open in IMG/M |
| 3300018076 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex | Environmental | Open in IMG/M |
| 3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
| 3300018422 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T | Environmental | Open in IMG/M |
| 3300018465 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS | Environmental | Open in IMG/M |
| 3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
| 3300019767 | Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T | Environmental | Open in IMG/M |
| 3300019869 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2 | Environmental | Open in IMG/M |
| 3300019884 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2 | Environmental | Open in IMG/M |
| 3300021078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo | Environmental | Open in IMG/M |
| 3300021510 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex | Environmental | Open in IMG/M |
| 3300022694 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex | Environmental | Open in IMG/M |
| 3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
| 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028578 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 | Environmental | Open in IMG/M |
| 3300028587 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3 | Environmental | Open in IMG/M |
| 3300028597 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14 | Environmental | Open in IMG/M |
| 3300028704 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379 | Environmental | Open in IMG/M |
| 3300028715 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203 | Environmental | Open in IMG/M |
| 3300028716 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198 | Environmental | Open in IMG/M |
| 3300028717 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158 | Environmental | Open in IMG/M |
| 3300028719 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182 | Environmental | Open in IMG/M |
| 3300028722 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368 | Environmental | Open in IMG/M |
| 3300028744 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367 | Environmental | Open in IMG/M |
| 3300028771 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369 | Environmental | Open in IMG/M |
| 3300028791 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144 | Environmental | Open in IMG/M |
| 3300028793 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159 | Environmental | Open in IMG/M |
| 3300028796 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141 | Environmental | Open in IMG/M |
| 3300028807 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186 | Environmental | Open in IMG/M |
| 3300028809 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48 | Environmental | Open in IMG/M |
| 3300028814 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183 | Environmental | Open in IMG/M |
| 3300028872 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204 | Environmental | Open in IMG/M |
| 3300028880 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181 | Environmental | Open in IMG/M |
| 3300028881 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116 | Environmental | Open in IMG/M |
| 3300028885 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185 | Environmental | Open in IMG/M |
| 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Host-Associated | Open in IMG/M |
| 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Host-Associated | Open in IMG/M |
| 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Host-Associated | Open in IMG/M |
| 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Host-Associated | Open in IMG/M |
| 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
| 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Host-Associated | Open in IMG/M |
| 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Host-Associated | Open in IMG/M |
| 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Host-Associated | Open in IMG/M |
| 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Host-Associated | Open in IMG/M |
| 3300032080 | Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300034176 | Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17 | Environmental | Open in IMG/M |
| 3300034354 | Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17 | Environmental | Open in IMG/M |
| 3300034417 | Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI25407J50210_100103242 | 3300003373 | Tabebuia Heterophylla Rhizosphere | MRRFLLLVFVVCAGASAAFSLWPRQLGGYLALFGQHTSVNSGVAVTVVAALTLLLVTLRVRLWRSERDLARLRHGLTHPMVPAAPVYPTAPVYPAYPVSSWGPRPLR* |
| Ga0068868_1009622581 | 3300005338 | Miscanthus Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADLVYPVSPVSSWGSRPLR* |
| Ga0070668_1000981533 | 3300005347 | Switchgrass Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALARPAAPADPVYPVSPVSSWGSRPVR* |
| Ga0070662_1000170846 | 3300005457 | Corn Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR* |
| Ga0068855_1005875672 | 3300005563 | Corn Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPLR* |
| Ga0068861_1000244142 | 3300005719 | Switchgrass Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADLVYPVSPVSSWGSRPVR* |
| Ga0075428_1012146403 | 3300006844 | Populus Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPAR* |
| Ga0075431_1011166722 | 3300006847 | Populus Rhizosphere | MRRFLLLVFVSCTAATVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR* |
| Ga0105240_111127122 | 3300009093 | Corn Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALGQPAAPADLVYPVSPVSSWGSRPVR* |
| Ga0105245_109642322 | 3300009098 | Miscanthus Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADLVYPVSPVSSWGSRPRR* |
| Ga0075418_113519021 | 3300009100 | Populus Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVTLRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPAR* |
| Ga0075418_120379871 | 3300009100 | Populus Rhizosphere | MGRSDSTPEGEQMRRFLLLVFVSCTAATVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYP |
| Ga0114129_105451871 | 3300009147 | Populus Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVTLRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWRSRPLR* |
| Ga0114129_112143812 | 3300009147 | Populus Rhizosphere | MGRSDSTPEGEQMRRFLLLVFVSCTAATVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR* |
| Ga0111538_126235881 | 3300009156 | Populus Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADLVYPVSPVSSWRSR |
| Ga0126307_103038602 | 3300009789 | Serpentine Soil | MRRFLLVVFGGCVAAAAAFALLPGQVAGYLALFERHARVNSGLAVTVLAVAILALVALRVRLWRSERELARVRRGLAQPVYPFYPAGPVSSWGSRPAR* |
| Ga0126307_103086172 | 3300009789 | Serpentine Soil | MRRFLLLVFLSCAAAAAAVALMPRQLAGYLGLFERHTQVNSGVAVTVLAVLTLALVALRVRLRRSERDLARRRRGLAQPAAPAFPVYPVSPVSSWGSRPVR* |
| Ga0126307_104069432 | 3300009789 | Serpentine Soil | MRRFLLLVFGSCAAAAAAFSLWPAQLGGFFALFGQHTRVNSGVAVTVLATLTLLLVALRVRLWRSERDLARMRRGLAQPPVPTYPAYPAYPVSPVSSWGSRPVR* |
| Ga0126313_100926213 | 3300009840 | Serpentine Soil | MRRFLLLVFLSCAAAAAAVALMPRQLAGYLALFERHMQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAFPVYPVSPVSSWGSRPVR* |
| Ga0126313_113303771 | 3300009840 | Serpentine Soil | MRRFLLVVFGGCVAAAAAFALLPGQVAGYLVLFERHARVNSGLAVTVLAVAILALVALRVRLWRSERELARVRRGLAQPVYPFYPAGPVSSWGS |
| Ga0126305_101928052 | 3300010036 | Serpentine Soil | MRRFLLVVFGGCVAAAAAFALLPGQVAGYLALFERHARVNSGVAVTVLAVAILALVALRVRLWRSERELARVRRGLAQPVYPFYPAGPVSSWGSRPAR* |
| Ga0126304_101987552 | 3300010037 | Serpentine Soil | MRRFLLLVFLSCAAAAAAVALMPRQLAGYLGLFERHTQVNSGVAVTVLAVLTLALVALRVRLRRSERDLARMRRGLAQPAAPAFPVYPVSPVSSWGSRPVR* |
| Ga0126304_106358792 | 3300010037 | Serpentine Soil | CAAAAAAFALLPGQVAGYLALFERHARVNSGVAVTVLAVAILALVALRVRLWRSERELARVRRGLAQPVYPVYPADPVSSWGSRPAR* |
| Ga0126315_105054462 | 3300010038 | Serpentine Soil | MRRFLLLVFLSCAAAAAAVALMPRQLAGYLGLFERHTQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAYPVYPVSPVSSWGSRPVR* |
| Ga0126308_102690252 | 3300010040 | Serpentine Soil | MRRFLLLVFLSCAAAAAAVALMPRQLAGYLALFERHMQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAYPVYPVSPVSSWGSRPVR* |
| Ga0126312_101857373 | 3300010041 | Serpentine Soil | MRRFLLVVFGGCVAAAAAFALLPGQVAGYLVLFERHARVNSGLAVTVLAVAILALVALRVRLWRSERELARVRRGLAQPVYPFYPAGPVSSWGSRPAR* |
| Ga0126314_105317722 | 3300010042 | Serpentine Soil | MRRLLLVVFGGCVAAAAAFALLPGQVAGYLALFERHARVNSGLAVTVLAVAILALVALRVRLWRSERELARVRRGLAQPVYPFYPAGPVSSWGSRPAR* |
| Ga0126306_103811922 | 3300010166 | Serpentine Soil | MRRFLLLVFLSCAAAAAAVALMPRQLAGYLGLFERHTQVNSGVAVTVLAVLTLALVALRVRLRRSDRDLARRRRGLAQPAAPAYPGYPVSPVSSWGARPVR* |
| Ga0126306_104433262 | 3300010166 | Serpentine Soil | MRRFLLVVFGGCAAASAAFALLPGQAAGYLALFEQHARVNSGVAVTVLAVAILALVALRVRLWRSERELARMRRGLAQPVYPVYPADPVSSWGSRPAR* |
| Ga0182000_106150411 | 3300014487 | Soil | LLLVFGSCAAAATALALWPGQLGGYLALFSQHTRVNSGVAVTVLATLTLLLVALRVRLWRSERDLARMRRGLAQPPVPTYPAYPAYPVSPVSSWGSRPVR* |
| Ga0163161_100663271 | 3300017792 | Switchgrass Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPAD |
| Ga0184605_101066192 | 3300018027 | Groundwater Sediment | MRRFLLLVFLSGAAASAALALMPRQLAGYLALFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPTFPAYPVSPVSSWGSRPVR |
| Ga0184620_100109133 | 3300018051 | Groundwater Sediment | MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPVYPVYPVSSWGSRPVR |
| Ga0184621_103013222 | 3300018054 | Groundwater Sediment | CAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR |
| Ga0184611_12369981 | 3300018067 | Groundwater Sediment | MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRALAQPAAPVYPVYPVSSWGSRPVR |
| Ga0184635_101657402 | 3300018072 | Groundwater Sediment | MRRFLLLGFLSCAAASAAFALLPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPVYPVYPVSSWGSRPVR |
| Ga0184640_101171991 | 3300018074 | Groundwater Sediment | LMPSQLAGYLALFEQHTLVNSGVAVTVLAVVTLALVALRARLWRSERALARLRRALAQPAAPADPLYPVSPVSSWGSRPVR |
| Ga0184609_100205773 | 3300018076 | Groundwater Sediment | MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVAPVSSWGSRPVR |
| Ga0184625_100098745 | 3300018081 | Groundwater Sediment | MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPLYPVSPVSSWGSRPVR |
| Ga0190265_104831532 | 3300018422 | Soil | MRRFLLLVFGSCAAAAAAFSLWPAQLGGFFALFGQHTLVNSGLAVTVLAALTLLLVALRVRLWRSERDLARMRRGLAQPPVPTYPAYPAYPVSPVSSWGSRPVR |
| Ga0190269_106336502 | 3300018465 | Soil | MRRFLLVVFGGCAAAWAAFALLPGQAAGYLALFEQHARVNSGVAVTVLAVAILALVALRVRLWRSERELARMRRGLAQPVYPVYPADPVSSWGSRPAR |
| Ga0190269_107839852 | 3300018465 | Soil | MRRFLLLVFGVCVAASAAFALLPRQLAGYLSLFEQHTRVNSGVAVTVLAVLTLTLVALRARLWRAERDLVRLRRDLAQPAPPAYPVYPAYPAGPVSSWGARPLR |
| Ga0190268_100801671 | 3300018466 | Soil | MRRFLLLVFVSCTAASVAFSLSPRQLDGYLALFERRTVVNSGVAVTVLALLTLALVALRVRLWRSQRELARARRGLVAAQPAALPYPSSAWGPRPVR |
| Ga0190268_103643202 | 3300018466 | Soil | MRRFLLVVFGGCAAAWAAFALLPGQVAGYLALFEQHARVNSGVAVTVLAVAILALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVYPVSPVSSWGSRPAR |
| Ga0190268_114724122 | 3300018466 | Soil | MRRFLLLVFVSCTAAPVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLTLLTLALVALRIRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR |
| Ga0190270_105218922 | 3300018469 | Soil | MRRFLLLVFVSCAAASVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR |
| Ga0190274_102198373 | 3300018476 | Soil | MRRFLLLVFVSCAAASVAFSLWPRQLDGYLALFERRTVVNSGVAVTVLALLTLALVALRVRLWRSQRELARARHGLVAAQPAALPYPSSAWGPRPVR |
| Ga0190274_112326782 | 3300018476 | Soil | LVFVSCTAAPVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLAVVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR |
| Ga0190267_102891632 | 3300019767 | Soil | MRRFLLLVFGSCAAAAAAFSLWPRQLGGFFALFGQHTRVNSGVAVTVLATLTLLLVALRVRLWRSERDLARMRRGLAQPPVPTYPAYPAYPVSPVSSWGSRPVR |
| Ga0193705_10047284 | 3300019869 | Soil | MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR |
| Ga0193741_10146593 | 3300019884 | Soil | MRRFLLLVFGSCAAAAAAFSLWPAQLGGFFALFGQHTLVNSGVAVTVLATLTLLLVALRVRLWRSERDLARMRRLAQPPVPTYPAYPAYPVSPVSSWGSRPVR |
| Ga0210381_100179401 | 3300021078 | Groundwater Sediment | MRRFLLLVFLSCAAASAVFAVMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPVYPVY |
| Ga0222621_10328741 | 3300021510 | Groundwater Sediment | AAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR |
| Ga0222623_100152211 | 3300022694 | Groundwater Sediment | RFLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPLYPVSPVSSWGSRPVR |
| Ga0222622_100323601 | 3300022756 | Groundwater Sediment | MRRFLLLVFLSCAAASAVFAVMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPAGPVYPVSPVSSWGSRPVR |
| Ga0222622_100999572 | 3300022756 | Groundwater Sediment | MRRFLLLVFLSCAAASAALALMPGQLAGYLVLFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVAPVSSWGSRPFR |
| Ga0207706_1000657512 | 3300025933 | Corn Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYSVSPGSSWGSRPAR |
| Ga0207667_109882312 | 3300025949 | Corn Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADLVYPVSPVSSWGSRPLR |
| Ga0207668_104984491 | 3300025972 | Switchgrass Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADLVYPVSPVSSWGSRPL |
| Ga0207675_1000146965 | 3300026118 | Switchgrass Rhizosphere | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPAR |
| Ga0272482_100396701 | 3300028578 | Soil | MRRFLLLVFGSCAAAAAAFSLWPAQLGGFFALFGQHTLVNSGVAVTVLATLTLLLVALRVRLWRSERDLARMRRGLAQPPVPTYPAYPAYPVSPVSSWGSRPV |
| Ga0247828_100408161 | 3300028587 | Soil | MRRFLPPVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPAR |
| Ga0247820_109177921 | 3300028597 | Soil | LLLVFVSCTAATVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR |
| Ga0307321_10388441 | 3300028704 | Soil | GGQLMRRFLLLVFLSCAAASAALALMPGQLAGYLVLFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVAPVSSWGSRPFR |
| Ga0307313_100102501 | 3300028715 | Soil | FLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR |
| Ga0307311_100962691 | 3300028716 | Soil | MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSP |
| Ga0307298_101236942 | 3300028717 | Soil | MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPTFPAYPVSPVSSWGSRPVR |
| Ga0307301_101977142 | 3300028719 | Soil | MRRFLLLVFLSCAAASAVFAVMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPLYPVSPVSSWGSRPVR |
| Ga0307319_101510952 | 3300028722 | Soil | MRRFLLVVFGGCAAASAAFALLPGQAAGYLALFEQHARVNSGVAVTVLAVAILALVALRVRLWRSERELARMRRGLAQPVYPVYPADPVSSWGSRPAR |
| Ga0307319_103043352 | 3300028722 | Soil | MRRFLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPLYPVSPVSPVSSWG |
| Ga0307318_101248701 | 3300028744 | Soil | MRRFLLLVFLSCAAASAALALMPGQLAGYLVLFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPTFPAYPVSPVSSWGSRPVR |
| Ga0307318_102913021 | 3300028744 | Soil | MRRFLLLVFLSGAAASAALALMPRQLAGYLALFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPTFPAYPVSPVSS |
| Ga0307320_102012362 | 3300028771 | Soil | MRRFLLLVFLSCAAASTVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR |
| Ga0307320_102373492 | 3300028771 | Soil | MRRFLLVVFGGCAAASAAFALLPGQAAGYLALFEQHARVNSGVAVTVLAVAILALVALRVRLWRSERELARMRRGLAQPVYPLYPADPVSSWGSRPAR |
| Ga0307320_104170611 | 3300028771 | Soil | MRRFLLLVFLSGAAASAALALMPRQLAGYLALFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPTFPAYPVSPVSSWGSRPAR |
| Ga0307290_100241203 | 3300028791 | Soil | MRRFLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR |
| Ga0307299_100829041 | 3300028793 | Soil | MRRFLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPAR |
| Ga0307287_102500242 | 3300028796 | Soil | MRRFLLLVFLSCAAASAALALMPGQLAGYLVLFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVSSWGSRPVR |
| Ga0307287_103585681 | 3300028796 | Soil | VFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR |
| Ga0307305_104020961 | 3300028807 | Soil | MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR |
| Ga0247824_101326332 | 3300028809 | Soil | MRRFLLLVFLSCATASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPAR |
| Ga0307302_102071472 | 3300028814 | Soil | MRRFLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPLYPVSPVSSWGSRPVR |
| Ga0307314_100508292 | 3300028872 | Soil | MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR |
| Ga0307300_102181052 | 3300028880 | Soil | MRRFLLLVFLSCAAASAALALMPGQLAGYLVLFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVAPVSSWGSRP |
| Ga0307277_100781631 | 3300028881 | Soil | RFLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR |
| Ga0307304_101130431 | 3300028885 | Soil | MRRFLLLVFGSCAAASAALALMPGQLAGYLVLFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVAPVSSWGSRPFR |
| Ga0307408_1001932853 | 3300031548 | Rhizosphere | MRRFLLLVFLSCAAAAAAVALMPRQLAGYLALFERHMQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAYPAYPPYPVSPVSSWGSRPAR |
| Ga0307408_1002899861 | 3300031548 | Rhizosphere | MRRFLLLVFVVCAGASAAFSLWPRQLGGYLALFGQHTSVNSGVAVTVVAVLTLLLGALRVRLWRSERDLARLRRGLTQPMAPV |
| Ga0307405_100134203 | 3300031731 | Rhizosphere | MRRFLLLVFLSCAAAAAAVALMPRQLAGYLALFERHMQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAYPVYPVSPVSSWGSRPVR |
| Ga0307413_102605022 | 3300031824 | Rhizosphere | MRRFLLLVFVVCAGASAAFSLWPRQLGGYLALFGQHTSVNSGVAVTVVAVLTLLLGALRVRLWRSERDLARLRRGLTQPMAPVYPAYPASSWGPRPLR |
| Ga0307410_101261142 | 3300031852 | Rhizosphere | MRRFLLLVFVVCAGASAAFSLWPRQLGGGYLALFGQHTSVDSGVAVTVVAVLTLLLGALRVRLWRSERDLARLRRGLTQPMAPV |
| Ga0307406_101906342 | 3300031901 | Rhizosphere | MRRFLLLVFVVCAGASAAFSLWPRQLGGYLALFGQHTSVNSGVAVTVVAVLTLLLGALRVRLWRSERDLARLRRGLTQPMAPVYPAYPVSSWGPRPLR |
| Ga0307412_101005752 | 3300031911 | Rhizosphere | MRRFLLLVFLSCAAAAAAVALMPRQLAGYLALFERHMQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAYPVYPVSPVSSWGSRPAR |
| Ga0307416_1000976844 | 3300032002 | Rhizosphere | MRRFLLLVFVVCAGASAAFSLWPRQLGGGYLALFGQHTSVDSGVAVTVVAVLTLLLGALRVRLWRSERDLARLRRGLTQPMAPVYPAYPASSWGPRP |
| Ga0307414_110552222 | 3300032004 | Rhizosphere | LVFVVCAGASAAFSLWPRQLGGGYLALFGQHTSVDSGVAVTVVAVLTLLLGALRVRLWRSERDLARLRRGLTQPMAPVYPAYPVSSWGPRPLR |
| Ga0307411_100552712 | 3300032005 | Rhizosphere | MRRFLLLVFLSCAAAAAAVALMPRQLAGYLALFERHMQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAYPVSPVSSWGSRPVR |
| Ga0326721_100254461 | 3300032080 | Soil | MRRFLLLVFGSCAAAAAAFSLWPRQLGGFVALFGQHTRVNSGVAVTVLATLTLLLVALRVRLWRSERDLARMRRGLAQPPVPVYPAYPVSPVSSWGSRPVR |
| Ga0307471_1009262602 | 3300032180 | Hardwood Forest Soil | MRRFLLLVFLSCAAASAAFALLPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVS |
| Ga0364931_0042733_859_1188 | 3300034176 | Sediment | MGRSDSTPEGEQMRRFLLLVFVSCTAATVAFSLWPRQLDGYLALFERRIMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR |
| Ga0364943_0368008_87_416 | 3300034354 | Sediment | MGRSDSTPEGEQMRRFLLLVFVSCTAATVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR |
| Ga0364941_024480_29_358 | 3300034417 | Sediment | MGRSDSTAEGEQMRRFLLLVFVSCTAATVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |