Metagenome / Metatranscriptome Family F102760

Basic Information
Family ID	F102760
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	58 residues
Representative Sequence	MGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREVVGLADKVGYTK
Number of Associated Samples	77
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	17.00 %
% of genes near scaffold ends (potentially truncated)	77.23 %
% of genes from short scaffolds (< 2000 bps)	87.13 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Archaea (99.010 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (17.822 % of family members)
Environment Ontology (ENVO)	Unclassified (19.802 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.604 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.59% β-sheet: 3.39% Coil/Unstructured: 61.02%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF14947	HTH_45	6.93
PF00072	Response_reg	4.95
PF04900	Fcf1	2.97
PF13483	Lactamase_B_3	2.97
PF00578	AhpC-TSA	1.98
PF01918	Alba	0.99
PF07690	MFS_1	0.99
PF13683	rve_3	0.99
PF00571	CBS	0.99
PF17159	MASE3	0.99
PF12146	Hydrolase_4	0.99
PF01844	HNH	0.99
PF02518	HATPase_c	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1412	rRNA-processing protein FCF1	Translation, ribosomal structure and biogenesis [J]	2.97
COG1581	DNA/RNA-binding protein AlbA/Ssh10b	Transcription [K]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	89.11 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	88.12 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	84.16 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	3.96 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	84.16 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	3.96 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	84.16 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	3.96 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	80.20 %
unclassified Nitrosopumilus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus	3.96 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	2.97 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	80.20 %
Nitrosopumilus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	3.96 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	2.97 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.99 %
Unclassified	root	N/A	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_11497621	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	687	Open in IMG/M
3300000890\|JGI11643J12802_12390904	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	613	Open in IMG/M
3300003987\|Ga0055471_10133237	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	749	Open in IMG/M
3300003987\|Ga0055471_10163920	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	683	Open in IMG/M
3300003987\|Ga0055471_10221629	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	595	Open in IMG/M
3300003992\|Ga0055470_10004536	All Organisms → cellular organisms → Archaea	1913	Open in IMG/M
3300004156\|Ga0062589_101359764	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	690	Open in IMG/M
3300004156\|Ga0062589_101445186	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	673	Open in IMG/M
3300005347\|Ga0070668_101405420	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	636	Open in IMG/M
3300005356\|Ga0070674_101580605	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	591	Open in IMG/M
3300006844\|Ga0075428_102528481	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	525	Open in IMG/M
3300006876\|Ga0079217_10650226	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	697	Open in IMG/M
3300006894\|Ga0079215_10096005	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1291	Open in IMG/M
3300006918\|Ga0079216_11843223	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	521	Open in IMG/M
3300006969\|Ga0075419_10076373	All Organisms → cellular organisms → Archaea	2128	Open in IMG/M
3300007004\|Ga0079218_10046567	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2660	Open in IMG/M
3300007004\|Ga0079218_10813221	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	900	Open in IMG/M
3300007004\|Ga0079218_12713092	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	591	Open in IMG/M
3300009081\|Ga0105098_10412042	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	673	Open in IMG/M
3300009094\|Ga0111539_11558324	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	766	Open in IMG/M
3300009147\|Ga0114129_12926074	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	564	Open in IMG/M
3300009156\|Ga0111538_10161358	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2847	Open in IMG/M
3300009157\|Ga0105092_10282536	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	935	Open in IMG/M
3300009168\|Ga0105104_10833208	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	537	Open in IMG/M
3300009553\|Ga0105249_11229204	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	820	Open in IMG/M
3300009789\|Ga0126307_10243206	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1446	Open in IMG/M
3300009789\|Ga0126307_11172905	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	621	Open in IMG/M
3300009840\|Ga0126313_10334054	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1191	Open in IMG/M
3300010036\|Ga0126305_10421177	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	883	Open in IMG/M
3300010036\|Ga0126305_10849662	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	622	Open in IMG/M
3300010037\|Ga0126304_10270980	All Organisms → cellular organisms → Archaea	1120	Open in IMG/M
3300010037\|Ga0126304_10793404	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	642	Open in IMG/M
3300010038\|Ga0126315_10596420	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	713	Open in IMG/M
3300010040\|Ga0126308_10048385	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2460	Open in IMG/M
3300010041\|Ga0126312_11489632	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	501	Open in IMG/M
3300010042\|Ga0126314_11290588	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	547	Open in IMG/M
3300010044\|Ga0126310_10671722	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	782	Open in IMG/M
3300010045\|Ga0126311_10080338	All Organisms → cellular organisms → Archaea	2189	Open in IMG/M
3300010045\|Ga0126311_10919583	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	711	Open in IMG/M
3300010045\|Ga0126311_10969362	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	694	Open in IMG/M
3300010166\|Ga0126306_10076120	All Organisms → cellular organisms → Archaea	2382	Open in IMG/M
3300010166\|Ga0126306_10341353	All Organisms → cellular organisms → Archaea	1161	Open in IMG/M
3300010166\|Ga0126306_11056418	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	663	Open in IMG/M
3300010371\|Ga0134125_12317685	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	584	Open in IMG/M
3300011333\|Ga0127502_10869582	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	697	Open in IMG/M
3300012884\|Ga0157300_1084913	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	560	Open in IMG/M
3300012909\|Ga0157290_10311302	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	584	Open in IMG/M
3300012911\|Ga0157301_10242202	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	630	Open in IMG/M
3300012915\|Ga0157302_10424828	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	555	Open in IMG/M
3300014265\|Ga0075314_1154657	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	534	Open in IMG/M
3300014265\|Ga0075314_1158521	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	529	Open in IMG/M
3300014314\|Ga0075316_1122561	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	636	Open in IMG/M
3300014318\|Ga0075351_1207206	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	503	Open in IMG/M
3300015077\|Ga0173483_10332656	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	756	Open in IMG/M
3300015201\|Ga0173478_10485747	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	615	Open in IMG/M
3300015371\|Ga0132258_10867249	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2278	Open in IMG/M
3300015372\|Ga0132256_100026553	All Organisms → cellular organisms → Archaea	5196	Open in IMG/M
3300015372\|Ga0132256_101096659	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	910	Open in IMG/M
3300015372\|Ga0132256_101442831	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	799	Open in IMG/M
3300015373\|Ga0132257_101494178	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	862	Open in IMG/M
3300018067\|Ga0184611_1059887	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1282	Open in IMG/M
3300018073\|Ga0184624_10073629	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1426	Open in IMG/M
3300018465\|Ga0190269_10724183	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	700	Open in IMG/M
3300018466\|Ga0190268_11720988	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	560	Open in IMG/M
3300018469\|Ga0190270_10397327	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1274	Open in IMG/M
3300018476\|Ga0190274_11524613	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	760	Open in IMG/M
3300018481\|Ga0190271_10208929	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	1951	Open in IMG/M
3300018481\|Ga0190271_10501595	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1325	Open in IMG/M
3300019884\|Ga0193741_1002572	All Organisms → cellular organisms → Archaea	5094	Open in IMG/M
3300019884\|Ga0193741_1106019	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	717	Open in IMG/M
3300020075\|Ga0206349_1625362	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	550	Open in IMG/M
3300025160\|Ga0209109_10037711	All Organisms → cellular organisms → Archaea	2596	Open in IMG/M
3300025567\|Ga0210076_1055856	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	856	Open in IMG/M
3300025582\|Ga0209386_1098750	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	520	Open in IMG/M
3300025791\|Ga0210115_1070005	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	731	Open in IMG/M
3300025792\|Ga0210143_1008127	All Organisms → cellular organisms → Archaea	1942	Open in IMG/M
3300025795\|Ga0210114_1055203	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	817	Open in IMG/M
3300025899\|Ga0207642_11154977	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	502	Open in IMG/M
3300025961\|Ga0207712_10491796	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1047	Open in IMG/M
3300027722\|Ga0209819_10122179	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	910	Open in IMG/M
3300027743\|Ga0209593_10144341	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	857	Open in IMG/M
3300027880\|Ga0209481_10727060	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	516	Open in IMG/M
3300027886\|Ga0209486_10958130	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	572	Open in IMG/M
3300030006\|Ga0299907_10055428	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	3169	Open in IMG/M
3300031229\|Ga0299913_10118883	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2594	Open in IMG/M
3300031547\|Ga0310887_10720732	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	621	Open in IMG/M
3300031731\|Ga0307405_10534182	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	946	Open in IMG/M
3300031908\|Ga0310900_10192149	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1426	Open in IMG/M
3300031908\|Ga0310900_10808786	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	759	Open in IMG/M
3300031908\|Ga0310900_11833968	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	516	Open in IMG/M
3300031943\|Ga0310885_10803162	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	534	Open in IMG/M
3300032000\|Ga0310903_10274584	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	820	Open in IMG/M
3300032000\|Ga0310903_10443791	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	668	Open in IMG/M
3300032002\|Ga0307416_100679170	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1117	Open in IMG/M
3300032002\|Ga0307416_102457499	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	620	Open in IMG/M
3300032003\|Ga0310897_10065793	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	1354	Open in IMG/M
3300032003\|Ga0310897_10510311	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	584	Open in IMG/M
3300032004\|Ga0307414_11296366	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	676	Open in IMG/M
3300032075\|Ga0310890_10348862	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	1081	Open in IMG/M
3300034668\|Ga0314793_148347	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	528	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.20%
Host-Associated	Host-Associated	19.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.37%
Plants	Host-Associated → Plants	19.80%
Aquatic	Environmental → Aquatic	16.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.83%
Marine	Environmental → Aquatic → Marine	7.92%
Freshwater	Environmental → Aquatic → Freshwater	6.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.97%
Sediment	Environmental → Aquatic → Sediment	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	7.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.91%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	7.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.99%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	17.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	7.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.94%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025582	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-two (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102760

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_114976212	3300000890	Soil	KRATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREVVGLADKVGYAK*
JGI11643J12802_123909042	3300000890	Soil	SWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADR
Ga0055471_101332371	3300003987	Natural And Restored Wetlands	HTRELLITMGSWGYGQSLLKQATNLGLIERKVKKEKSARRGKPRIYNSLTNKGKDLVGVADKVGYVK*
Ga0055471_101639202	3300003987	Natural And Restored Wetlands	LMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK*
Ga0055471_102216291	3300003987	Natural And Restored Wetlands	QSLLKRATNLSLIERKVKKEKSAGRGKPRIYNSLTNKGRDLVGLADKVGYVK*
Ga0055470_100045361	3300003992	Natural And Restored Wetlands	HTRELLITMGSWGYGQSLMKKATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGRDVVGLADKVVYTK*
Ga0062589_1013597641	3300004156	Soil	TMGSWGYGQSLLKRATNLGLIERKVKKDKSPGRGKPRIYNSLTNKGREVVGLADKLGYGK
Ga0062589_1014451861	3300004156	Soil	KRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYER*
Ga0070668_1014054201	3300005347	Switchgrass Rhizosphere	TNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYER*
Ga0070674_1015806051	3300005356	Miscanthus Rhizosphere	MGSGYGQSLLKRATNLGLIERKVKKEKSAGRGKPRIYNSLTNKG
Ga0075428_1025284811	3300006844	Populus Rhizosphere	KNKELHTRELLITMGSWGYGQSLMKRATNLGLIARKVKKAKSPGRGKPRIYNSLTNKGREVVGLADKVGYAK*
Ga0079217_106502261	3300006876	Agricultural Soil	CTQENYLTMGSWGYGQSLLKQATNLGLIERKVKKEKSAGRGKPRIYNSLTNKGRDLVGLADKVGYVK*
Ga0079215_100960053	3300006894	Agricultural Soil	SLMKRATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREVVGLADKVGYAK*
Ga0079216_118432232	3300006918	Agricultural Soil	MGSWGYGQSLMKRATNLGLIERKVKNEKSRGRGKPRIYNSLTNKGREVVGLADKVGYAK*
Ga0075419_100763731	3300006969	Populus Rhizosphere	NKELHTRELLITMGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYER*
Ga0079218_100465671	3300007004	Agricultural Soil	RELLITMGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREVVGLADKVGYAK*
Ga0079218_108132211	3300007004	Agricultural Soil	TNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREVVGLADKVGYAK*
Ga0079218_127130922	3300007004	Agricultural Soil	WGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK*
Ga0105098_104120421	3300009081	Freshwater Sediment	MGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREVVGLADKVGYTK*
Ga0111539_115583241	3300009094	Populus Rhizosphere	MGSWGYGQSLLKRATNLGLIERKVKKEKTPGRGKPRIYNSLTNYGREVLGLADKVIYRK*
Ga0114129_129260741	3300009147	Populus Rhizosphere	NKELHTRELLITMGSWGYGQSLMKRATNLGLIARKVKKAKSPGRGKPRIYNSLTNKGREVVGLADKVGYAK*
Ga0111538_101613581	3300009156	Populus Rhizosphere	ILKKNKELHTRELLITMGSWGYGQSLLKRATNLGLIERKVKKDKSPGRGKPRIYNSLTNKGREVVGLADKVIYRK*
Ga0105092_102825361	3300009157	Freshwater Sediment	SWGYGQSLMKRATNLGLIERKVKKEKSPRRGKPRIYNSLTNKGREVVGLADKVGYAK*
Ga0105092_106827922	3300009157	Freshwater Sediment	VLKKNKELHTRELLITMGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK*
Ga0105104_108332081	3300009168	Freshwater Sediment	GQSLLKRATNLGLIERKVKKEKSAGRGKPRIYNSLTNKGRDVVGLADKVVYTK*
Ga0105249_112292042	3300009553	Switchgrass Rhizosphere	MGSWGYGQSLLKRATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGRDVVGLADKVVYTK*
Ga0126307_102432062	3300009789	Serpentine Soil	LGLIERKVKKEKSRGRGKPRIYNSLTNKGREVVVGLADKVGYIK*
Ga0126307_111729051	3300009789	Serpentine Soil	NKELHTRELLITMGSWGYGQILMKRATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREVLVLADKVGYAK*
Ga0126313_103340541	3300009840	Serpentine Soil	LGYEQSLLKRATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREEVVGLADKVGYIK*
Ga0126305_104211771	3300010036	Serpentine Soil	KRATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREVLVLADKVGYAK*
Ga0126305_108496621	3300010036	Serpentine Soil	LGLIERKVKKEKTRGRGKPRIYNSLTNKGREVVVLADKVGYAK*
Ga0126304_102709802	3300010037	Serpentine Soil	WGYGQSLMKRATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGREVVGLADKVGYAK*
Ga0126304_107934041	3300010037	Serpentine Soil	LGLIERKVKKEKTRGRGKPRIYNSLTNKGREVVVLADKVGYTK*
Ga0126315_105964201	3300010038	Serpentine Soil	SLLKRATNLGLIERKVKKEKSGGRGKPRIYNSLTNKGREVLVLADKVGYAK*
Ga0126308_100483851	3300010040	Serpentine Soil	SWGYGQILIKRATNLGLVERKVKKEKSRGRGKPRIYNSLTNKGREVLVLADKVGYAK*
Ga0126312_114896321	3300010041	Serpentine Soil	LHTRELLITMGSWGYGQSLLKKATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREVVVLADKVGYAK*
Ga0126314_112905881	3300010042	Serpentine Soil	ATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREEVVGLADKVGYIK*
Ga0126310_106717221	3300010044	Serpentine Soil	NKELHTRELLITMGSWGYGQSLLKRATNLGLIERKVKKDKSPGRGKPRIYNSLTNKGREVVVLADKVGYGK*
Ga0126311_100803381	3300010045	Serpentine Soil	ELLITMGSWGYGQSLMKRATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGREVVVLADKVGYAK*
Ga0126311_109195832	3300010045	Serpentine Soil	ELLITMGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREVLVLADKVGYAK*
Ga0126311_109693622	3300010045	Serpentine Soil	LGLVERKVKKEKSRGRGKPRIYNSLTNKGREVLVLADKVGYAK*
Ga0126306_100761202	3300010166	Serpentine Soil	LGYEQSLLKRATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREEVVGLADKVGYIT*
Ga0126306_103413532	3300010166	Serpentine Soil	HTRELLITMGSWGYGQSLMKRATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGREVVGLADKVGYAK*
Ga0126306_110564181	3300010166	Serpentine Soil	TMGSWGYTQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGKEVVILADKIGKEK
Ga0134125_123176851	3300010371	Terrestrial Soil	MGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK*
Ga0127502_108695821	3300011333	Soil	MKRATNLGLIERKVKKDKSPGRGKPRIYNSLTNKGREVVGLADKVGYGK*
Ga0157300_10849131	3300012884	Soil	TNLGLIERKVKKDKSPGRGKPRIYNSLTNKGREVVGLADKLGYGK*
Ga0157290_103113022	3300012909	Soil	MKRATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGRDVVGLADKVVYTK*
Ga0157301_102422021	3300012911	Soil	LHTRELLITMGSWGYGQSLLKRATNLGLIERKVKKDKSPGRGKPRIYNSLTNKGREVVGLADKVIYRK*
Ga0157302_104248282	3300012915	Soil	NKELHTRELLIKMGSWGYGQSLMKRATNLGLINRIVKKDKSPGRGKPRIYNSLTNKGREVVGLADKLGYGK*
Ga0075314_11546571	3300014265	Natural And Restored Wetlands	LHTRELLITMGSWGYGQSLMKKATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGRDLVGLADKVGYVK*
Ga0075314_11585211	3300014265	Natural And Restored Wetlands	MGSWGYGQSLMKRATNLGLIERKVKKDRSRGRGKPRIYNSLTNKGREV
Ga0075316_11225611	3300014314	Natural And Restored Wetlands	ELHTRELLITMGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK*
Ga0075351_12072061	3300014318	Natural And Restored Wetlands	ELHTRELLSTIGSWGYGQSLMKRATNLELIERKVKKEKSPRRGKPRIYNSLTNKGREVVGLADKVGYAK*
Ga0173483_103326561	3300015077	Soil	WGYGQSLMKRATNLGLIERKVTKDKCPGRGKPRIYNSLTNKGREVVGLADKLGYGK*
Ga0173478_104857471	3300015201	Soil	MGSWGYGQSLLKRATNLGLIERKVKKDKSPGRGKPRIYNSLTNKGREVVGLADKLGYGK*
Ga0132258_108672491	3300015371	Arabidopsis Rhizosphere	RELLITMGSWGYGQSLLKRATNLGLIERKVKKEKTPGRGKPRIYNSLTNYGREVLGLADKVIYRK*
Ga0132256_1000265531	3300015372	Arabidopsis Rhizosphere	SWGYGQSLLKRATNLGLIERKVKKDKSPGRGKPRIYNSLTNKGREVVGLADKLGYGK*
Ga0132256_1010966591	3300015372	Arabidopsis Rhizosphere	KRATNLGLIERKVKKEKTPGRGKPRIYNSLTNYGREVLGLADKVIYRK*
Ga0132256_1014428312	3300015372	Arabidopsis Rhizosphere	LITMGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK*
Ga0132257_1014941781	3300015373	Arabidopsis Rhizosphere	LKRATNLGLIERKVKKDKSPGRGKPRIYNSLTNKGKEVVVLADKVGYAK*
Ga0184611_10598873	3300018067	Groundwater Sediment	ITMGSWGYGQSLLKRATNLGLIERKVKIEKSRGRGKPRIYNSLTNKGREVVGLADKVGYG
Ga0184624_100736292	3300018073	Groundwater Sediment	MGSWGYGQSLLKRATNLGLIERKVKKEKSAGRGKPRIYNSLTNKGKDLVGLADKVGYVK
Ga0190269_107241831	3300018465	Soil	LGGYGQSLLKRATNLGLIERKVKKEKSAGRGKPRIYNSLTNKGRDLVGLADKVGYVK
Ga0190268_117209881	3300018466	Soil	MGSWGYGQSLMKRATNLGLIERKVKKAKSPGRGKPRIYNSLTNKGREVVGLAEKIGYVK
Ga0190270_103973271	3300018469	Soil	HTRELLITMGSWGYGQSLMKKATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGRDVVGLADKVVYTK
Ga0190274_115246132	3300018476	Soil	WGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREVVGLADKVGYAK
Ga0190271_102089291	3300018481	Soil	LITMGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK
Ga0190271_105015951	3300018481	Soil	MGSWGYGQSLLKRATNLGLIERKVKKEKSRGRGKPRIYNSLANKGREVVGLADKVGYTK
Ga0193741_10025721	3300019884	Soil	GQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNSLTNQGREVLALADKVGYSK
Ga0193741_11060191	3300019884	Soil	GSWGYGQSLLKRATNLGLIERKVKKDKSRGRGKPRIYNSLTNKGREVVGLADKIGYVK
Ga0206349_16253621	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYER
Ga0209109_100377112	3300025160	Soil	MGSWGYGQSLLKRATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREVVGLADKVGYGK
Ga0210076_10558562	3300025567	Natural And Restored Wetlands	MKRATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGREVVGLADKVGYAK
Ga0209386_10987502	3300025582	Arctic Peat Soil	GSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK
Ga0210115_10700051	3300025791	Natural And Restored Wetlands	MKRATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGREVVGLAEKIGYVK
Ga0210143_10081272	3300025792	Natural And Restored Wetlands	MGSWGYGQSLLKRATNLSLIERKVKKEKSAGRGKPRIYNSLTNKGRDLVGLADKVGYVK
Ga0210114_10552031	3300025795	Natural And Restored Wetlands	TRELLITMGSWGYGQSLLKRATNLSLIERKVKKEKSAGRGKPRIYNSLTNKGRDLVGLADKVGYVK
Ga0207642_111549771	3300025899	Miscanthus Rhizosphere	MGSWGYGQSLLKRATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGRDLVGLADKVGYVK
Ga0207712_104917963	3300025961	Switchgrass Rhizosphere	MKKATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGRDLVGLADKVGYVK
Ga0209819_101221791	3300027722	Freshwater Sediment	MGSWGYGQSLVKRATKLGLIERKVKKDKSSGRGKPRIYNSLTNKGREVVGLADKIGYAK
Ga0209593_101443411	3300027743	Freshwater Sediment	LMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK
Ga0209481_107270601	3300027880	Populus Rhizosphere	GYGQSLMKRATNLGLIERKVKKAKSPGRGKPRIYNSLTNKGREVVGLADKVGYAK
Ga0209486_109581301	3300027886	Agricultural Soil	MGSWGYGQSLMKRATNLGLVERKVKKEKSRGRGKPRIYNSLTNKGREVVVLADKVGYAK
Ga0299907_100554284	3300030006	Soil	NKELHTRELLITMGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNSLTNKGREVVGLADKVGYAK
Ga0299913_101188833	3300031229	Soil	QSLMKRATNLGLVERKVKKEKSPGRGKPRIYNSLTNKGREVVGLADKVGYAK
Ga0310887_107207322	3300031547	Soil	GYGQSLLKRATNLGLIERKVKKEKSAGRGKPRIYNSLTNKGRDLVGLADKVGYVK
Ga0307405_105341822	3300031731	Rhizosphere	LGYEQSLLKRATNLGLIERKVKKEKSHGRGKPRIYNSLTNKGREEVVGLADKVGYIK
Ga0310900_101921491	3300031908	Soil	KNKELHTRELLITMGSWGYGQSLMKKATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGRDVVGLADKVVYTK
Ga0310900_108087862	3300031908	Soil	KELHTRELLITMGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK
Ga0310900_118339681	3300031908	Soil	ELLITMGSWGYGQSLMKKATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGRDLVGLADKVGYVK
Ga0310885_108031622	3300031943	Soil	ELLITMGSWGYGQSLMKRATNLALIDRKIKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK
Ga0310903_102745841	3300032000	Soil	MKRATYLGLIERKVKKEKSPGRGKPRIYNSLTNKGREVVGLADKVGYAK
Ga0310903_104437911	3300032000	Soil	ELHTRELLITMGSWGYGQSLMKKATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGRDVVGLADKVVYTK
Ga0307416_1006791703	3300032002	Rhizosphere	MGSWGYGQSLLKRATSLGLIERKVKKDKSPGRGKPRIYNSLTNKGREVVGLADKLGYVK
Ga0307416_1024574992	3300032002	Rhizosphere	NLGLIERKVKKEKTRGRGKPRIYNSLTNKGREVVVLADKVGYTK
Ga0310897_100657933	3300032003	Soil	HTRELLITMGSWGYGQSLMKRATNLGLIERKVKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK
Ga0310897_105103111	3300032003	Soil	GQSLMKKATNLGLIERKVKKEKSPGRGKPRIYNSLTNKGRDVVGLADKVVYTK
Ga0307414_112963662	3300032004	Rhizosphere	NSRITYNYGKLGYEQSLLKRATNLGLIERKVKKEKSHGRGKPRIYNSLTNKGREEVVGLADKVGYIK
Ga0310890_103488623	3300032075	Soil	VLKTNKELHTRELLITMGSWGYGQSLMKRATNLALIDRKIKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK
Ga0314793_148347_20_169	3300034668	Soil	MKRATNLALIDRKIKKEKSRGRGKPRIYNALTNKGREVVKLADRIGYEK

Hidden Markov Model


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