Metagenome Family F102743

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102743
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	96 residues
Representative Sequence	MRLFPLLFAIAILAAIIGMSANASETVVRCGQLSDVTPASFVVSTPDSDPLRVAIPDGKRVSEASGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP
Number of Associated Samples	78
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.97 %
% of genes near scaffold ends (potentially truncated)	34.65 %
% of genes from short scaffolds (< 2000 bps)	90.10 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.802 % of family members)
Environment Ontology (ENVO)	Unclassified (38.614 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.495 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 14.52% β-sheet: 25.00% Coil/Unstructured: 60.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF02811	PHP	27.72
PF01850	PIN	20.79
PF01402	RHH_1	4.95
PF07733	DNA_pol3_alpha	0.99
PF00578	AhpC-TSA	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	0.99
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	93.07 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	79.21 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13.86 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	79.21 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	79.21 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.98 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	79.21 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.98 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	79.21 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.98 %
Jiangella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	79.21 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.98 %
Jiangella gansuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella gansuensis	0.99 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005171\|Ga0066677_10262886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	982	Open in IMG/M
3300005172\|Ga0066683_10548987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	705	Open in IMG/M
3300005175\|Ga0066673_10091599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1617	Open in IMG/M
3300005180\|Ga0066685_10460411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	883	Open in IMG/M
3300005440\|Ga0070705_101596761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	549	Open in IMG/M
3300005445\|Ga0070708_100101454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2635	Open in IMG/M
3300005445\|Ga0070708_101081121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	751	Open in IMG/M
3300005446\|Ga0066686_10503822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	824	Open in IMG/M
3300005468\|Ga0070707_100192034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1991	Open in IMG/M
3300005468\|Ga0070707_101771687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300005471\|Ga0070698_101548117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	615	Open in IMG/M
3300005536\|Ga0070697_100054424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3252	Open in IMG/M
3300005536\|Ga0070697_100281317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1427	Open in IMG/M
3300005540\|Ga0066697_10325898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella gansuensis	898	Open in IMG/M
3300005552\|Ga0066701_10947897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	509	Open in IMG/M
3300005555\|Ga0066692_10371981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	906	Open in IMG/M
3300005558\|Ga0066698_10163750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1508	Open in IMG/M
3300005558\|Ga0066698_10348992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1023	Open in IMG/M
3300005558\|Ga0066698_10359297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1005	Open in IMG/M
3300006034\|Ga0066656_10353440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	950	Open in IMG/M
3300006046\|Ga0066652_100064095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2832	Open in IMG/M
3300006049\|Ga0075417_10217994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	908	Open in IMG/M
3300006049\|Ga0075417_10578688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	570	Open in IMG/M
3300006852\|Ga0075433_10355841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1294	Open in IMG/M
3300006854\|Ga0075425_101323315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	816	Open in IMG/M
3300006871\|Ga0075434_100070819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3477	Open in IMG/M
3300006903\|Ga0075426_10349377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1087	Open in IMG/M
3300006904\|Ga0075424_100233749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1953	Open in IMG/M
3300006914\|Ga0075436_100669368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	768	Open in IMG/M
3300007076\|Ga0075435_100186233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1755	Open in IMG/M
3300007076\|Ga0075435_101109593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	692	Open in IMG/M
3300009012\|Ga0066710_100262737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2504	Open in IMG/M
3300009012\|Ga0066710_100269247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2476	Open in IMG/M
3300009038\|Ga0099829_10182060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1692	Open in IMG/M
3300009088\|Ga0099830_10164857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1714	Open in IMG/M
3300009090\|Ga0099827_10878418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	776	Open in IMG/M
3300009100\|Ga0075418_12189966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	603	Open in IMG/M
3300009137\|Ga0066709_100191850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2672	Open in IMG/M
3300009137\|Ga0066709_101794443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	862	Open in IMG/M
3300009137\|Ga0066709_103932523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300009147\|Ga0114129_10475313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1636	Open in IMG/M
3300009147\|Ga0114129_10594220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1435	Open in IMG/M
3300009147\|Ga0114129_10832343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1175	Open in IMG/M
3300009147\|Ga0114129_13366076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300009162\|Ga0075423_10567618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1195	Open in IMG/M
3300010301\|Ga0134070_10211356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	715	Open in IMG/M
3300010322\|Ga0134084_10340087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	569	Open in IMG/M
3300010323\|Ga0134086_10237732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	690	Open in IMG/M
3300010326\|Ga0134065_10327060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	595	Open in IMG/M
3300010333\|Ga0134080_10071244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1395	Open in IMG/M
3300010336\|Ga0134071_10398168	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300012096\|Ga0137389_11123181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	673	Open in IMG/M
3300012201\|Ga0137365_10555107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	843	Open in IMG/M
3300012203\|Ga0137399_10373910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1186	Open in IMG/M
3300012206\|Ga0137380_11617358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	532	Open in IMG/M
3300012207\|Ga0137381_10355156	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300012208\|Ga0137376_11419333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300012209\|Ga0137379_11200129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	665	Open in IMG/M
3300012351\|Ga0137386_10579658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	807	Open in IMG/M
3300012354\|Ga0137366_10424318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	966	Open in IMG/M
3300012355\|Ga0137369_10311537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1164	Open in IMG/M
3300012356\|Ga0137371_10147547	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300012358\|Ga0137368_10234685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1279	Open in IMG/M
3300012359\|Ga0137385_10853319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	755	Open in IMG/M
3300012360\|Ga0137375_10222481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1767	Open in IMG/M
3300012532\|Ga0137373_10586431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	842	Open in IMG/M
3300012532\|Ga0137373_10702902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	754	Open in IMG/M
3300012975\|Ga0134110_10500154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300012976\|Ga0134076_10509542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300014965\|Ga0120193_10022901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	725	Open in IMG/M
3300015358\|Ga0134089_10426741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	570	Open in IMG/M
3300015359\|Ga0134085_10233037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	798	Open in IMG/M
3300015374\|Ga0132255_102209430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	839	Open in IMG/M
3300017654\|Ga0134069_1305071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	565	Open in IMG/M
3300017656\|Ga0134112_10172271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	839	Open in IMG/M
3300017656\|Ga0134112_10302679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	643	Open in IMG/M
3300018431\|Ga0066655_10874474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	613	Open in IMG/M
3300018433\|Ga0066667_10805947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	799	Open in IMG/M
3300025327\|Ga0209751_10704211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	799	Open in IMG/M
3300025910\|Ga0207684_10595209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	945	Open in IMG/M
3300025922\|Ga0207646_10000024	All Organisms → cellular organisms → Bacteria	250734	Open in IMG/M
3300025922\|Ga0207646_10317409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1408	Open in IMG/M
3300025922\|Ga0207646_11632824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300026314\|Ga0209268_1067646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1082	Open in IMG/M
3300026323\|Ga0209472_1044544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1942	Open in IMG/M
3300026324\|Ga0209470_1105625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1260	Open in IMG/M
3300026324\|Ga0209470_1171959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	941	Open in IMG/M
3300026332\|Ga0209803_1290383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300026537\|Ga0209157_1145285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1072	Open in IMG/M
3300026540\|Ga0209376_1217649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	850	Open in IMG/M
3300026540\|Ga0209376_1378641	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300027480\|Ga0208993_1026215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1031	Open in IMG/M
3300027645\|Ga0209117_1021116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2102	Open in IMG/M
3300027678\|Ga0209011_1144275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	671	Open in IMG/M
3300027846\|Ga0209180_10159255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1302	Open in IMG/M
3300027873\|Ga0209814_10056359	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300027873\|Ga0209814_10523959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	526	Open in IMG/M
3300031965\|Ga0326597_10229706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2154	Open in IMG/M
3300031965\|Ga0326597_10320859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1753	Open in IMG/M
3300031965\|Ga0326597_10421482	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300031965\|Ga0326597_10866353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	928	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.19%
Host-Associated	Host-Associated	18.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.19%
Plants	Host-Associated → Plants	18.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.37%
Loam	Environmental → Terrestrial → Soil → Loam	17.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.98%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	17.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	12.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.98%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066677_102628862	3300005171	Soil	MRFVPVVFAAAILAAIIGMSANASDMVVLCGQLSDVTSASFVVTAPDSDPLRVAIPGGKHVSETSGYTCASVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0066683_105489871	3300005172	Soil	MSYMRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDNDPLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLVTILAPGMP
Ga0066673_100915994	3300005175	Soil	MSYMRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDNDPLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0066685_104604111	3300005180	Soil	AASSRSRNAVSGTALAPCFYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVTQP*
Ga0070705_1015967612	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTAASFVLSSPDSDPLRVAIPDGKRVSEASGYTCVSVLPGKPAVQLVTILAPGMPGY
Ga0070708_1001014544	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTAASFVLSSPDSDPLRVAIPDGKRVSEASGYTCVSVLPGKPAVQLVTILAPGMPGYVAQP*
Ga0070708_1010811211	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFPLLFAIAILAAIIGMSANASETVVRCGQLSDVTPASFVVSTPDSDPLRVAIPDGKRVSEASGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0066686_105038222	3300005446	Soil	TSRRSLGCVFAIPKRCERHGPCSMSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQLVTILTPGMPGYVAQP*
Ga0070707_1001920343	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFPLLFAIAILAAIIGMSANASETVVRCGQLSDVTTASFVLSSPDSDPLRVAIPDGKRVSEASGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0070707_1017716871	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRVFPLLFAIAILAAVVGISANASETVVRCGQVSDVKAASFVLTSPGVDPLKVAIPYDKQVQLSTYSCVSVLPGRPSAKLA
Ga0070698_1015481171	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	PLLFAIAILAAIIGMSANASETVVRCGQLSDVTTASFVLSSPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVSQP*
Ga0070697_1000544244	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRVFPLLFAIAILAAVVGISANASETVVRCGQVSDVKAASFVLTSPGVDPLKVAIPYDKQVQLSTYSCVSVLPGRPSAKLAGVVAPGMTGYVAQP*
Ga0070697_1002813172	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFPLLFAIAILAAIIGMSASASETVVRCGQVSDVTAASFVLSSPDSDPLRVAIPDGKRMSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0066697_103258981	3300005540	Soil	MSYMRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDNDPLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLVTILAPGM
Ga0066701_109478972	3300005552	Soil	FPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDNDPLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0066692_103719811	3300005555	Soil	FAIAILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDNDPLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0066698_101637503	3300005558	Soil	MSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVTQP*
Ga0066698_103489921	3300005558	Soil	GCVFAIPKRCERHGPCSMSYMRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDNDPLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0066698_103592973	3300005558	Soil	MSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVTIPEGKRVSETSGYTCVSVLPGK
Ga0066656_103534401	3300006034	Soil	MSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPEGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVTQP*
Ga0066652_1000640954	3300006046	Soil	MSYMRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDNDPLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLVTILAPGM
Ga0075417_102179941	3300006049	Populus Rhizosphere	SDLAARGLLPVYDMRFIPVLFAAAILAAIVGVSANASDAVVRCGQLSNVTPVSFVISSPDSDPLRVAIPAGKRMSETSGYTCVSVIPGRPAAQFVTVLAPGMPGYVAQP*
Ga0075417_105786881	3300006049	Populus Rhizosphere	MRFFPVLFAIAILLAIVGISTNAQETVVRCGQVSDVKPASFVLTSPGVDPLKVAIPYDKQVQLSTYACVSVLPGRPAAKLAGVVAPGMPGYVAQP*
Ga0075433_103558412	3300006852	Populus Rhizosphere	MRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTAASFVLSSPDSDPLRVAIPDGKRVSEASGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0075425_1013233152	3300006854	Populus Rhizosphere	MRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTAASFVLSSPDSDPLRVAIPDGKRVSEASGYTCVSVLPGKPAAQLV
Ga0075434_1000708191	3300006871	Populus Rhizosphere	PLLFAIAILAAIIGMSANASETVVRCGQVSDATAASFVLSSPDSDPLRVAIPDGKRVSEATGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0075426_103493772	3300006903	Populus Rhizosphere	MRLFPLLFAVAILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSEASGYACVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0075424_1002337492	3300006904	Populus Rhizosphere	MRLFPLLFAVAILAAIIGMSANASETVVRCGQVSDVTAASFVLSSPDSDPLRVAIPDGKRVSEATGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0075436_1006693681	3300006914	Populus Rhizosphere	MSYMRLFPLLFAVAILAAIIGMSANASETVVRCGQVSDVTAASFVLSSPDSDPLRVAIPDGKRVSEASGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0075435_1001862332	3300007076	Populus Rhizosphere	MRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVGEASGYACVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0075435_1011095932	3300007076	Populus Rhizosphere	MRLFPLLFAVAILAAIIGMSANASETVVRCGQVSDVTAASFVLSSPDSDPLRVAIPDGKRVSEASEYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0066710_1002627373	3300009012	Grasslands Soil	MSYMRLLPLLFAIAILAAIIGMSANASDTVVRCGQLSDVTPASFLVSTPDNDPLRVVIPDGKRVSETSGYTCVSVLPGKPAALLVTILAPGMPGYVAQP
Ga0066710_1002692472	3300009012	Grasslands Soil	MRFVPVVFSAAILAAIIGMSANASDTVVRCGQLSDVTSASFVITAPDSDPLRVAIPGGKHVSEASGYTCVSVLPGKPAAQLVIILAPGMPGYVAQP
Ga0099829_101820602	3300009038	Vadose Zone Soil	MRLFPVLFVIAILAAIIGMSANASETVVRCGQVSDVTSASLVISAPDSDPLRVAIPNGKRVSDTSEYTCVSVLPGKPVAQLVAILAPGMPGYVAQP*
Ga0099830_101648571	3300009088	Vadose Zone Soil	MRLFPVLFVIAILAAIIGMSANASETVVRCGQVSDVTSASLVISAPDSDPLRVAIPNGKRVSDTSGYTCVSVLPGKPVAQLVAILAPGMPGYVAQP*
Ga0099827_108784182	3300009090	Vadose Zone Soil	MRFVPVVFAAAILAAIIGMSANASDTVVRCGQLSDVTSASFVITAPDSDPLRVAIPGGKHVSEASGYTCVSVLPGKPAAQLVIILAPGMPGYVAQP*
Ga0075418_121899662	3300009100	Populus Rhizosphere	MRFLPVIFAAAILAAIVGISANASDTVVRCGQLSEVTAASFVLSAPNSDPLRVAIPIGKRMSETSGYTCVSVLPGKPAAQLVTVLAPGMPGYIDQP*
Ga0066709_1001918504	3300009137	Grasslands Soil	MRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDNDPLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0066709_1017944432	3300009137	Grasslands Soil	MRFVPVVFSAAILAAIIGMSANASDTVVRCGQLSDVTSASFVITAPDSDPLRVAIPGGKHVSEASGYTCVSVLPGKPAAQLVIILAPGMPGYAAQP*
Ga0066709_1039325232	3300009137	Grasslands Soil	MRLLPLLFAIAILAAIIGMSANASDTVVRCGQLSDVTPASFLVSTPDNDPLRVVIPDGKRVSETSGYTCVSVLPGKPAALLVTSLAPA
Ga0114129_104753133	3300009147	Populus Rhizosphere	MRFIPVLFAAAILAAIVGVSANASDAVVRCGQLSNVTPVSFVISSPDSDPLRVAIPTGKRMSETSGYTCVSVIPGRPAAQFVTVLAPGMPGYVAQP*
Ga0114129_105942202	3300009147	Populus Rhizosphere	MRIFPLLFAIAILVAIVGISANAQEAVVRCGQVSDVMTASFIVTSPGVDPLKVTIPYDKQVQLSNYTCVSVLPGRPAAQLVAVLAPGMPGYIAQP*
Ga0114129_108323434	3300009147	Populus Rhizosphere	MRFFPVLFAIAILAAIVGMSVNASETVVRCGQLSDVTPASFVLISEGTDPLRVVIPDSKRMSETTGYTCVSVLPGKPDAQLVTVLAPGMPGYVTQP*
Ga0114129_133660762	3300009147	Populus Rhizosphere	MRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTAASFVLSSPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0075423_105676181	3300009162	Populus Rhizosphere	CVFAIPKRCERHGPCFTSYMRLFPLLFAVAILAAIIGMSANASETVVRCGQVSDVTAASFVLSSPDSDPLRVAIPDGKRVSEATGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0134070_102113562	3300010301	Grasslands Soil	MSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVTIPVGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVTQP*
Ga0134084_103400872	3300010322	Grasslands Soil	MRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDNDPLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLINILAPGMPGYVTQP*
Ga0134086_102377321	3300010323	Grasslands Soil	MRLLPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVTQP*
Ga0134065_103270601	3300010326	Grasslands Soil	MRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDNDQLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0134080_100712443	3300010333	Grasslands Soil	MRLLPLLFAIAILAAIIGMSANASDTVVRCGQLSDVTPASFLVSTPDNDPLRVVIPDGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVTQP*
Ga0134071_103981683	3300010336	Grasslands Soil	MSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQLVTILAPGM
Ga0137389_111231811	3300012096	Vadose Zone Soil	MRLFPVLFVIAILAAIIGMSANASETVVRCGQVSDVTSASLVISAPDSDPLRVAIPNGERVSDTSGYTCVSVLPGKPVAQLVAILAPGMPGYVAQP*
Ga0137365_105551072	3300012201	Vadose Zone Soil	LLLAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYACVSVLPGKPAAQLVTILVPGMPGYVTQP*
Ga0137399_103739102	3300012203	Vadose Zone Soil	MRFVPVVFAAAILAAIIGMSANASDTVVRCGQLSDVTSASFVITAPDSDPLRVAIPTGRDIVPADYACVSVLPGTPAAQLVGLLTPDMPGYVAAH*
Ga0137380_116173581	3300012206	Vadose Zone Soil	VLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVISTPDNDPLRVVVPDGKRVGETSGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0137381_103551564	3300012207	Vadose Zone Soil	VRLFPVLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVISTPDNDPLRVVVPDGKRVGETSGYTCVSVLPGKPSAQLVTILVPGMPGYVAQP*
Ga0137376_114193331	3300012208	Vadose Zone Soil	MRFVPVVFAAAILAAIIGMSANASDTVVRCGQLSDVTSASFVITAPDSDPLRVAIPDGKHVSEASGYTCVSVLPGKPVAQLVTILAPGMPGYVA
Ga0137379_112001292	3300012209	Vadose Zone Soil	MRFVPVVFAAAILAAIIGMSANASDTVVRCGQVSDVTPASFVISTPDNDPLRVVVPDGKRVGETSGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0137386_105796582	3300012351	Vadose Zone Soil	VRLFPVLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVISTPDNDPLRVVVPDGKRVGETSGYTCVSVLPGKPAAQLVTILAPGMPGYVTQP*
Ga0137366_104243181	3300012354	Vadose Zone Soil	LLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYACVSVLPGKPAAQLVTILAPGMPGYVTQP*
Ga0137369_103115371	3300012355	Vadose Zone Soil	MRFLPVLFAAAILAAIVGISANASDTVVRCGQLSDVTPASFVLLSERTDPLRVVIPDGKRMSESAGYTCVSVLPGKPAAQLVTVLAPGMPGYVAQP*
Ga0137371_101475474	3300012356	Vadose Zone Soil	VRLFPVLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVISTPDNDPLRIVVPDGKRVGETSGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0137368_102346852	3300012358	Vadose Zone Soil	MRLFPVLFAIAILAAIVGISANAQETVVRCGQVSEVKTASFVITSPGVDPLKVAIPYDKQVQLSNYTCVSVLPGRPAAQLVAVLAPGMPGYIAQP*
Ga0137385_108533192	3300012359	Vadose Zone Soil	VLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVISTPDNDPLRVVVPDGKRVGETSGYTCVSVLPGKPAAQLVTILVPGMPGYVAQP*
Ga0137375_102224812	3300012360	Vadose Zone Soil	MRFVPVVFAAALLAVIVGMSANASDTVVRCGQLSDVTPASFVLSSPDSDPLRVVIPAGKRMSETSGYTCVSVLPGKPAAQLTTVLAPGMPGYVAQP*
Ga0137373_105864311	3300012532	Vadose Zone Soil	MSANASDTVVRCGQLSDVTPASFVLLSPDSDPLRVVIPAGKRMSETSGYTCVSVLPGKPAAQLTTVLAPGMPGYVAQP*
Ga0137373_107029022	3300012532	Vadose Zone Soil	LLFAIAILAAIIGMSANASDTVVRCGQLSDVTSASFVVTAPDSDPLRVAIPGGKHVREASGYTCVSVLPGKPAAQLVIILAPGMPGYVAQP*
Ga0134110_105001541	3300012975	Grasslands Soil	MRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDNDPLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLVTILAPGMPGYVTQP*
Ga0134076_105095422	3300012976	Grasslands Soil	MSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQLITILAPGMPGYVAQP*
Ga0120193_100229011	3300014965	Terrestrial	MRFFPVVFAVAILAAIVGISANAEDTVVRCGQVSDIKPASFVLNGPGVDPLKVAIPHDKQVQLSSYVCVSVVPGRPAAQLASLLAPGMPGYVAQP*
Ga0134089_104267411	3300015358	Grasslands Soil	MSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPEGKRVSETSGYTCVSVLPGKPAAQFVTILAPGMPGYVAQP*
Ga0134085_102330371	3300015359	Grasslands Soil	MSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP*
Ga0132255_1022094302	3300015374	Arabidopsis Rhizosphere	MRFFPIVFAAAILLAIVGISASASETVVRCGQVSDIKPASFVINTRGVDPLKVVVPADRQVQVSSYVCVSVVPGRPAAQLAALLAPGMPGYVAQP*
Ga0134069_13050711	3300017654	Grasslands Soil	CVFAIPKRCERHGPCSMSYMRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVTQP
Ga0134112_101722712	3300017656	Grasslands Soil	FPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVTIPEGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVTQP
Ga0134112_103026791	3300017656	Grasslands Soil	MSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQFVTI
Ga0066655_108744742	3300018431	Grasslands Soil	GCVFAIPKRCERHGPCSMSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPEGKRVSETSGYTCVSVLPGKPAAQLVTILTPGMPGYVTQP
Ga0066667_108059472	3300018433	Grasslands Soil	MSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQLSDVTSASFVITAPDSDPLRVAIPGGKHVSEASGYTCVSVLPGKPAAQLVIILAPGMPGYVAQP
Ga0209751_107042112	3300025327	Soil	MRLIPVLFAAAILAAIIGMSANASDTVVRCGQLSDVSPASFVISSPDSDPLQVVIPSGKRMSESDGYTCVSVLPGKPAAQLAAVLAPGMPGYVAQQ
Ga0207684_105952091	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TSRRSAGCVFAIPKRCERHGPCSMSYVRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTAASFVLSSPDSDPLRVAIPDGKRVSEASGYTCVSVLAGKPAAQLVTILAPGMPGYVAQP
Ga0207646_1000002476	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFPLLFAIAILAAIIGMSANASETVVRCGQLSDVTTASFVLSSPDSDPLRVAIPDGKRVSEASGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP
Ga0207646_103174094	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRVFPLLFAIAILAAVVGISANASETVVRCGQVSDVKAASFVLTSPGVDPLKVAIPYDKQVQLSTYSCVSVLPGRPSAKLAGVVAPGMTGYVAQP
Ga0207646_116328241	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FTSYMRLFPLLFAIAILAAIIGMSANASDTVVRCGQLSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVAQP
Ga0209268_10676462	3300026314	Soil	ILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDNDPLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLVTILAPGMPGYVAQP
Ga0209472_10445442	3300026323	Soil	MSYMRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDNDPLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLVTILAPGMPGYVAQP
Ga0209470_11056252	3300026324	Soil	MSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVTQP
Ga0209470_11719591	3300026324	Soil	MSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPEGKRVSETSGYTCVSVLPGKPA
Ga0209803_12903831	3300026332	Soil	MRFVPVVFAAAILAAIIGMSANASDTVVRCGQLSDVTSASFVVTAPDSDPLRVAIPDGKHVNEASGYTCVSVLPSKP
Ga0209157_11452852	3300026537	Soil	MSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPEGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVTQP
Ga0209376_12176491	3300026540	Soil	RHGPCSMSYVRLFPLLFAIAILAAIIGMSANASDTVVRCGQVSDVTPASFVVSTPDSDPLRVAIPDGKRVSETSGYTCVSVLPGKPAAQLVTILAPGMPGYVTQP
Ga0209376_13786412	3300026540	Soil	MSYMRLFPLLFAIAILAAIIGMSANASETVVRCGQVSDVTPASFVVSTPDNDPLRVVVPDGKRLSETSGYMCVSVLPGKPAAQLVTIL
Ga0208993_10262153	3300027480	Forest Soil	MRFVPAIFIVGVFAAIVGMSANASEAVVRCGRLSDVTSGTFVLTSPDADPLRVVIPDGKPMSEPGGYTCVSVVPGRPTAHLAGVLAPGMPGYVAAH
Ga0209117_10211164	3300027645	Forest Soil	MRLFPVLFAAAILAAIVGMSANASDTVVRCGQVSDVTPASFVISSPSADPLRVVIPTGKSVELSNYTCVSVLPGRQAAQLAAIVTPGMPGYVTGE
Ga0209011_11442753	3300027678	Forest Soil	VPAIFIVGVFAAIVGMSANASETVVRCGQLSDVTSGSFVITSPDADPLRVVIPDGKRVSEPDGYTCVSVVPDRPTAHLAGVLAPGMPGYVAAH
Ga0209180_101592552	3300027846	Vadose Zone Soil	MRLFPVLFVIAILAAIIGMSANASETVVRCGQVSDVTSASLVISAPDSDPLRVAIPNGKRVSDTSGYTCVSVLPGKPVAQLVAIL
Ga0209814_100563594	3300027873	Populus Rhizosphere	MRFIPVLFAAAILAAIVGVSANASDAVVRCGQLSNVTPVSFVISSPDSDPLRVAIPAGKRMSETSGYTCVSVIPGRPAAQFVTVLAPGMPGYVAQP
Ga0209814_105239592	3300027873	Populus Rhizosphere	MRFFPVLFAIAILLAIVGISTNAQETVVRCGQVSDVKPASFVLTSPGVDPLKVAIPYDKQVQLSTYACVSVLPGRPAAKLAGVVAPGMP
Ga0326597_102297062	3300031965	Soil	MRLIPVLFAAAILAAIIGMSANASDTVVRCGQLSDVSPASFVISSPDSDPLRVVIPSGKRMSESDGYTCVSVLPGKPAAQLVTVLAPGMPGYLAQE
Ga0326597_103208593	3300031965	Soil	MRFLPVLFAAAILAAIVGISANASDTVVRCGQLSDVTPASFVLLSEGTDPLRVVIPAGKRMSESAGYTCVSVLPGKPAAQLVTVLAPGIPGYVAQE
Ga0326597_104214822	3300031965	Soil	MRFFPVLFAIAILAAIVGMSANASDTVVRCGQLSDVTPASFVLSSEGTDPLRVVIPAGKRMSKSAGYTCVSVLPGKPAAQLVTVLAPGMPGYVAQP
Ga0326597_108663531	3300031965	Soil	MRFLPVLFAAAILAAIIGMSANAPDTVVRCGQLSDVTPASFLLSSEGTDPLRVVIPAGKRMSETTGYTCVSVLPGKPAAQLVTVLAPGMPGYVAKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102743

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences