Metagenome Family F102718

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F102718
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	79 residues
Representative Sequence	MDYATSSGGLMVHSRSDWPCAGCRPDLISDGRGFCLCLKCAHGIISAAEAGSEGARALLDDVTDALVLLELPLAAFQGPLN
Number of Associated Samples	67
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.23 %
% of genes near scaffold ends (potentially truncated)	28.71 %
% of genes from short scaffolds (< 2000 bps)	67.33 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (89.109 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (33.663 % of family members)
Environment Ontology (ENVO)	Unclassified (37.624 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (58.416 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.03% β-sheet: 8.26% Coil/Unstructured: 58.72%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00211	Guanylate_cyc	11.88
PF08448	PAS_4	9.90
PF01161	PBP	7.92
PF01596	Methyltransf_3	6.93
PF01261	AP_endonuc_2	5.94
PF01208	URO-D	2.97
PF02729	OTCace_N	1.98
PF07238	PilZ	1.98
PF01844	HNH	0.99
PF01425	Amidase	0.99
PF08335	GlnD_UR_UTase	0.99
PF04366	Ysc84	0.99
PF02518	HATPase_c	0.99
PF00313	CSD	0.99
PF01740	STAS	0.99
PF00185	OTCace	0.99
PF11154	DUF2934	0.99
PF16363	GDP_Man_Dehyd	0.99
PF13578	Methyltransf_24	0.99
PF00072	Response_reg	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	11.88
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	7.92
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	6.93
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	6.93
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	6.93
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	2.97
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.99
COG2844	UTP:GlnB (protein PII) uridylyltransferase	Signal transduction mechanisms [T]	0.99
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.11 %
Unclassified	root	N/A	10.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.11 %
Unclassified	root	N/A	10.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.11 %
Unclassified	root	N/A	10.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	52.48 %
Unclassified	root	N/A	10.89 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.98 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	47.52 %
Unclassified	root	N/A	10.89 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.99 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.99 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.52 %
Unclassified	root	N/A	10.89 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.99 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.99 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.52 %
Unclassified	root	N/A	10.89 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.99 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.99 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.52 %
Unclassified	root	N/A	10.89 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.99 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.99 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_103884284	Not Available	520	Open in IMG/M
3300005332\|Ga0066388_100011800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6933	Open in IMG/M
3300005529\|Ga0070741_10006654	All Organisms → cellular organisms → Bacteria	24632	Open in IMG/M
3300006865\|Ga0073934_10013565	All Organisms → cellular organisms → Bacteria	9401	Open in IMG/M
3300006865\|Ga0073934_10038700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4372	Open in IMG/M
3300009039\|Ga0105152_10028391	All Organisms → cellular organisms → Bacteria	2204	Open in IMG/M
3300009444\|Ga0114945_10460963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300010324\|Ga0129297_10428863	Not Available	588	Open in IMG/M
3300010358\|Ga0126370_12441044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300010361\|Ga0126378_10737789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1096	Open in IMG/M
3300010361\|Ga0126378_13379104	Not Available	507	Open in IMG/M
3300010376\|Ga0126381_100580607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1592	Open in IMG/M
3300010391\|Ga0136847_10372652	All Organisms → cellular organisms → Bacteria	2836	Open in IMG/M
3300012964\|Ga0153916_10330192	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300012964\|Ga0153916_11925727	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300016294\|Ga0182041_10012472	All Organisms → cellular organisms → Bacteria	4913	Open in IMG/M
3300017941\|Ga0187850_10143639	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300017972\|Ga0187781_11397245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300017998\|Ga0187870_1147929	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300018005\|Ga0187878_1015267	All Organisms → cellular organisms → Bacteria	4310	Open in IMG/M
3300018064\|Ga0187773_10820503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300018082\|Ga0184639_10625656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300018089\|Ga0187774_10607245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300021476\|Ga0187846_10010326	All Organisms → cellular organisms → Bacteria → Acidobacteria	4513	Open in IMG/M
3300021476\|Ga0187846_10054427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1764	Open in IMG/M
3300021476\|Ga0187846_10074344	Not Available	1480	Open in IMG/M
3300021476\|Ga0187846_10090294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1324	Open in IMG/M
3300021476\|Ga0187846_10443803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300025310\|Ga0209172_10011214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7788	Open in IMG/M
3300025310\|Ga0209172_10056112	All Organisms → cellular organisms → Bacteria	2415	Open in IMG/M
3300025311\|Ga0209343_10010733	All Organisms → cellular organisms → Bacteria	10391	Open in IMG/M
3300025311\|Ga0209343_10231000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1346	Open in IMG/M
3300025324\|Ga0209640_10068824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3062	Open in IMG/M
3300025324\|Ga0209640_10543604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300025843\|Ga0209182_10012101	All Organisms → cellular organisms → Bacteria	2601	Open in IMG/M
3300027893\|Ga0209636_10600845	Not Available	885	Open in IMG/M
3300027896\|Ga0209777_10299596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1243	Open in IMG/M
3300030613\|Ga0299915_10683564	Not Available	651	Open in IMG/M
3300031539\|Ga0307380_10018132	All Organisms → cellular organisms → Bacteria	8492	Open in IMG/M
3300031545\|Ga0318541_10109329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1492	Open in IMG/M
(restricted) 3300031587\|Ga0315308_1214877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
(restricted) 3300031604\|Ga0315309_1018821	All Organisms → cellular organisms → Bacteria	3546	Open in IMG/M
3300031680\|Ga0318574_10869617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300031681\|Ga0318572_10738718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300031682\|Ga0318560_10338638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300031707\|Ga0315291_10033522	All Organisms → cellular organisms → Bacteria	5962	Open in IMG/M
3300031707\|Ga0315291_10292473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1601	Open in IMG/M
3300031719\|Ga0306917_10205401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1493	Open in IMG/M
3300031736\|Ga0318501_10466966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300031746\|Ga0315293_10117411	All Organisms → cellular organisms → Bacteria	2243	Open in IMG/M
3300031781\|Ga0318547_10695354	Not Available	632	Open in IMG/M
3300031833\|Ga0310917_11116920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300031834\|Ga0315290_10469905	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300031862\|Ga0315280_10000423	All Organisms → cellular organisms → Bacteria	78428	Open in IMG/M
3300031862\|Ga0315280_10012620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10182	Open in IMG/M
3300031862\|Ga0315280_10036554	All Organisms → cellular organisms → Bacteria	4585	Open in IMG/M
(restricted) 3300031876\|Ga0315310_10044398	All Organisms → cellular organisms → Bacteria → Proteobacteria	2412	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1003517	All Organisms → cellular organisms → Bacteria	12210	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1198753	Not Available	720	Open in IMG/M
3300031910\|Ga0306923_10945697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300031941\|Ga0310912_10068898	All Organisms → cellular organisms → Bacteria	2541	Open in IMG/M
3300031947\|Ga0310909_10221672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1576	Open in IMG/M
3300031949\|Ga0214473_10798635	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300031949\|Ga0214473_11706054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300032035\|Ga0310911_10134813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1381	Open in IMG/M
3300032053\|Ga0315284_11812232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300032069\|Ga0315282_10000288	All Organisms → cellular organisms → Bacteria → Acidobacteria	99557	Open in IMG/M
3300032069\|Ga0315282_10076426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3227	Open in IMG/M
3300032069\|Ga0315282_10418150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300032069\|Ga0315282_10472804	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300032070\|Ga0315279_10036382	All Organisms → cellular organisms → Bacteria	4896	Open in IMG/M
3300032070\|Ga0315279_10499374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300032070\|Ga0315279_10590461	Not Available	702	Open in IMG/M
3300032076\|Ga0306924_10451521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1468	Open in IMG/M
3300032076\|Ga0306924_11968134	Not Available	604	Open in IMG/M
3300032156\|Ga0315295_11871944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300032156\|Ga0315295_12014805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300032163\|Ga0315281_10077748	All Organisms → cellular organisms → Bacteria	3910	Open in IMG/M
3300032163\|Ga0315281_10106726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3237	Open in IMG/M
3300032163\|Ga0315281_10858459	All Organisms → cellular organisms → Bacteria → Acidobacteria	931	Open in IMG/M
3300032173\|Ga0315268_10001786	All Organisms → cellular organisms → Bacteria	24710	Open in IMG/M
3300032173\|Ga0315268_10057687	All Organisms → cellular organisms → Bacteria	3667	Open in IMG/M
3300032173\|Ga0315268_10680614	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300032401\|Ga0315275_10600791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1229	Open in IMG/M
3300032401\|Ga0315275_10803524	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300032401\|Ga0315275_10944740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300032401\|Ga0315275_12111940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300032516\|Ga0315273_12319360	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300033233\|Ga0334722_10021061	All Organisms → cellular organisms → Bacteria	5572	Open in IMG/M
3300033289\|Ga0310914_10049909	All Organisms → cellular organisms → Bacteria	3444	Open in IMG/M
3300033289\|Ga0310914_11798933	Not Available	517	Open in IMG/M
3300033290\|Ga0318519_10923653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300033480\|Ga0316620_11840747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300033486\|Ga0316624_10131963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1829	Open in IMG/M
3300033486\|Ga0316624_11480863	All Organisms → cellular organisms → Bacteria → PVC group	624	Open in IMG/M
3300033487\|Ga0316630_11857009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300033489\|Ga0299912_10200836	All Organisms → cellular organisms → Bacteria → Acidobacteria	1714	Open in IMG/M
3300033513\|Ga0316628_100347010	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1867	Open in IMG/M
3300033513\|Ga0316628_100701831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1327	Open in IMG/M
3300033513\|Ga0316628_103162962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300033513\|Ga0316628_104200407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	53.47%
Terrestrial	Environmental → Terrestrial	46.53%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	45.54%
Soil	Environmental → Terrestrial → Soil	41.58%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.95%
Cave	Environmental → Terrestrial → Cave	4.95%
Marine	Environmental → Aquatic → Marine	1.98%
Sediment	Environmental → Aquatic → Sediment	0.99%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	37.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.95%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	4.95%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	3.96%
Loam	Environmental → Terrestrial → Soil → Loam	2.97%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.98%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.99%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.99%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.99%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%
Clay	Environmental → Terrestrial → Soil → Clay	0.99%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	37.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.94%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	3.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.97%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.98%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.99%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.99%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.99%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.99%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	33.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.95%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	4.95%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.96%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	2.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.97%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.98%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.99%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.99%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.99%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.99%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.99%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300009039	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300010324	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025311	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025843	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm (SPAdes)	Environmental	Open in IMG/M
3300027893	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031587 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP3	Environmental	Open in IMG/M
3300031604 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP4	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031876 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP5	Environmental	Open in IMG/M
3300031877 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP9	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1038842841	3300001213	Wetland	MEYGMSTNGLTVHSRKDWPCAICRPGACSESRGFWLCDHCAQGMIHAAEAGVADARALLDDVTDALAILHYQPGSSAPPI*
Ga0066388_1000118006	3300005332	Tropical Forest Soil	MVHSRTDWPCAGCRPDLISDGRGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALVLLECPSAAFQGPLN*
Ga0070741_100066548	3300005529	Surface Soil	MDYVMSPGGLLVHLREDWPCAVCNPGEIAEGRGYCLCAACAQSVMAAAGAGYEDARALLDDITDALALLEVSSSGASLAPN*
Ga0073934_100135652	3300006865	Hot Spring Sediment	MEYVTSPSGLMVHRRNDWPCAVCRPERISEGRGFWLCSHCAQGMIFAAEAGIEEARALLDDVTDALALLEYHSSGAVAPPM*
Ga0073934_100387004	3300006865	Hot Spring Sediment	MEYAMSPGGLMVHTRTDWPCAVCKPDRMSEGRGFWLCARCAHGMIFAAEAGVEDARALLDDVTDALALLEVRTTLEALPSN*
Ga0105152_100283912	3300009039	Lake Sediment	MDYAVSHGGLLVHARKDWPCAVCRPEGISEGRGFWLCAHCAHGMIVAAEAGIEGARALLPEVADALIRLEGQSLESRLPTN*
Ga0114945_104609631	3300009444	Thermal Springs	MDYAMSPGGLMVHSRGDWPCAVCRPDQTSEGRGFWLCAQCAQGMIFAAEAGIEDARALLDDVTDALALLEYRPGASAPPM*
Ga0129297_104288631	3300010324	Lake Sediment	MDYAVSPGGLLVHARRDWPCALCRPQDIPECRGLWLCVHCAHGIVIAAEAGVEGARALLDDITDALVRLEGSGVETRVASN*
Ga0126370_124410441	3300010358	Tropical Forest Soil	MDYATSSGGLMVHSRTDWPCAGCRPDLISDGRGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALVLLECPLAAVQGPLN*
Ga0126378_107377892	3300010361	Tropical Forest Soil	MDYATSSGGLMVHSRTDWPCAGCRPDLISDGRGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALVLLECPLAAFQGPLN*
Ga0126378_133791041	3300010361	Tropical Forest Soil	MVHSRSDWPCAGCRPEPISDGHGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALVRLECPVAALRGWVN*
Ga0126381_1005806071	3300010376	Tropical Forest Soil	SGGLMVHSRSDWPCAGCRPEPISDGHGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALVLLECPVAALRGWVN*
Ga0136847_103726521	3300010391	Freshwater Sediment	MEYTVSPGGLLVHSREDWPCALCRPQDTSERRGFWLCVRCAHSMIAATEAGVDGARALLDDITDALVMLECPNLETQLPAN*
Ga0153916_103301922	3300012964	Freshwater Wetlands	MDYAVSHGGLLVHARKDWPCAVCRPQGISEGRGFWLCAHCAHGMIVAAEAGIEGARALLPEVGDALIRLEGQSLESRLPTN*
Ga0153916_119257271	3300012964	Freshwater Wetlands	MEYAMSPGGLMVHTRMDWPCAVCRPQRFSEGRGFSLCAHCAQGMIFAAEAGIEDARALLDDVTDAL
Ga0182041_100124722	3300016294	Soil	MDYATSSGGLMVHSRSDWPCAGCRPDLISDGRGFCLCLKCAHGVISAAEAGLEGARALLDDVTDALVLLELPLAAFQGPLN
Ga0187850_101436392	3300017941	Peatland	MEYAMAPSGLMVHKREDWPCAVCRPDQNSEGHGFWLCAHCAHGMIFAAEAGVEDARALLGDVTDALALLEVQMTLGRTPAN
Ga0187781_113972451	3300017972	Tropical Peatland	LMVHSRSDWPCAGCRPDLISDSRGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALVLLELPLAAFQGLLN
Ga0187870_11479291	3300017998	Peatland	EVGRQHMEYAIAPSGLMVHKREDWPCAVCRPDQNSEGHGFWLCAHCAHGMIFAAEAGVEDARALLGDVTDALALLEVQMTLGRTPAN
Ga0187878_10152674	3300018005	Peatland	MDYAVSHGGLLVHARKDWPCAVCRPEGISEGRGFWLCANCAHGMIVAAEAGIEGARALLPEVADALFSLEGQSLESRLPAN
Ga0187773_108205032	3300018064	Tropical Peatland	MEYAMSSNGLTVHSRKDWPCAVCRPDGCSEGRGLWLCAHCAQGMIHAVEAGVEDARALLDDVTDALAMLEYRPGLSA
Ga0184639_106256562	3300018082	Groundwater Sediment	LTVHNRKDWPCAICRPGGCSDGRGFWLCAHCAQGMIFAAEAGVEDARALLDDVTDALAMLEYRPGATAPPI
Ga0187774_106072452	3300018089	Tropical Peatland	MDYAMSPGGLLVHSRGDWPCAVCRPDEIPERGGFCLCLECANALMAAAGAGEEGARALLDELTDALTLLAARHEGTNLAAN
Ga0187846_100103263	3300021476	Biofilm	MVHSRSDWPCAGCRPDLISDGRGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALMLLELPLATFQGPVN
Ga0187846_100544271	3300021476	Biofilm	DYATSSSGLMVHSRSDWPCAGCRPNLISDGRGFCLCVKCAHGIISAAEAGSEGARALLDDVTDALVLLELPLATFQDPVN
Ga0187846_100743442	3300021476	Biofilm	MDYVTSSNGLMVHCRNDWPCAGCRPNLTSDSRGFCLCVKCAHGVISAAEAGSECARALLDDVTDALVLLECPLTVPLSSIN
Ga0187846_100902943	3300021476	Biofilm	MDYATSSGGLMVHSRSDWPCAGCRPDLISDGRGFCLCVKCAHGVISAAEAGSEGARALLDEVTDALVLLEFPLAAFHGPVN
Ga0187846_104438031	3300021476	Biofilm	VDHVVSSGGLMVHSRVDWPCASCRPYEVSDTKGLCLCVRCAHGLINAAEAGSEDARSLLDEITDALVLLEGPDFLPNFDVN
Ga0209172_100112142	3300025310	Hot Spring Sediment	MEYVTSPSGLMVHRRNDWPCAVCRPERISEGRGFWLCSHCAQGMIFAAEAGIEEARALLDDVTDALALLEYHSSGAVAPPM
Ga0209172_100561122	3300025310	Hot Spring Sediment	MEYAMSPGGLMVHTRTDWPCAVCKPDRMSEGRGFWLCARCAHGMIFAAEAGVEDARALLDDVTDALALLEVRTTLEALPSN
Ga0209343_100107337	3300025311	Groundwater	MDHAISPGGLTVHNRKDWPCAVCRPDRSSEGRGFGLCSQCAQGIILAAQAGVEDARALLDDVTDALAMLEFRPEAQALPI
Ga0209343_102310001	3300025311	Groundwater	MEYTVSPGGLLVHSRGDWPCAMCRPQDTSERHGFYLCVRCAHNMIAATEAGVDGARALLDDITDALVLLESPNLETQLPAN
Ga0209640_100688244	3300025324	Soil	MEYTVSPSGLLVHSRGDWPCAMCRPQDTSERHGFYLCVRCAHNMIAATEAGVDGARALLDDITDALVLLESPNLETQLPAN
Ga0209640_105436042	3300025324	Soil	MEYAMSPSGLTVHNRKDWPCANCRPSGCSEGRGFWLCAQCAQGMIFAAEAGVEDARALLDDVTDALALLEYRPGATAPPM
Ga0209182_100121012	3300025843	Lake Sediment	MDYAVSRGGLLVHDRRDWPCALCRPQAISECRGFCLCSRCAHGMIVAAEAGIEGARALLDDVTDALVLLEAQSLQAKPTLN
Ga0209636_106008452	3300027893	Marine Sediment	MGFAMSPGGLTVHTSSEWPCAVCRPDRISEGRGFWLCAQCAQGMIFAAEAGNEDARALLDDVTDALALLEYQSGQAAPPL
Ga0209777_102995962	3300027896	Freshwater Lake Sediment	MEYAMAPSGLMVHKREDWPCAVCRPDQNSEGHGFWLCAHCAHGMIFAVEAGVEDARAMLEDVTDALALLEVQTTLGRTPAN
Ga0299915_106835642	3300030613	Soil	MEYGMSTNGLTVHSRKDWPCANCRPAGCFEGRGFWLCAHCAQGMIHAAEAGVEDARALLDDVTDALAMLEYRPGATAPPM
Ga0307380_100181325	3300031539	Soil	MEYTVSPSGLLVHSRGDWPCALCRPQDTSERRGFYLCVRCAHSMITATEAGVDGARALLDDITDALVLLESPNLETQLPAN
Ga0318541_101093293	3300031545	Soil	MDYATSSGGLMVHSRSDWPCAGCRPDLISDGRGFCLCLKCAHGIISAAEAGSEGARALLDDVTDALVLLELPLAAFQGPLN
(restricted) Ga0315308_12148772	3300031587	Sediment	MDYAVSPGGLLVHARRDWPCALCRPQDIPECRGLWLCVHCAHGIVIAAEAGVEGARALLDDITDALVRLEGSGVETRVASN
(restricted) Ga0315309_10188213	3300031604	Sediment	MAEDWRQTMDYAVSRGGLLVHDRRDWPCALCRPQAISECRGFCLCSRCAHGMIIAAEAGIEGARNLLEDVTDALVRLEGQSLQAKLTLN
Ga0318574_108696171	3300031680	Soil	MDYATSSGGLMVHSRSDWPCAGCRPDLISDGRGFCLCLKCAHGIISAAEAGSEGARALLDDVTDALV
Ga0318572_107387182	3300031681	Soil	YATSSGGLMVHSRSDWPCAGCRPDLISDGRGFCLCLKCAHGIISAAEAGSEGARALLDDVTDALVLLELPLAAFQGPLN
Ga0318560_103386382	3300031682	Soil	MDYATSSGGLMVHSRTDWPCAGCRPDLISDGRGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALVLLECPLAAFQGPLN
Ga0315291_100335223	3300031707	Sediment	MDYAVSHGGLLVHARKDWPCAVCRPQGISEGRGFWLCANCAHGMIVAAEAGIEGARALLPEVADALIRLEGQWLESSLPTN
Ga0315291_102924732	3300031707	Sediment	MDYAMSPGGLMVHTRKDWPCAVCKPDRISEGRGFWLCAHCAQGMIFAAEAGVEDARALLDDVTDALALLEYQAGQAATPPM
Ga0306917_102054011	3300031719	Soil	CAGCRPDLISDGRGFCLCLKCAHGIISAAEAGSEGARALLDDVTDALVLLELPLAAFQGPLN
Ga0318501_104669661	3300031736	Soil	AMDYATSSGGLMVHSRSDWPCAGCRPDLISDGRGFCLCLKCAHGIISAAEAGSEGARALLDDVTDALVLLELPLAAFQGPLN
Ga0315293_101174112	3300031746	Sediment	MDYAVSHGGLLVHARKDWPCAVCRPQGISEGRGFWLCAHCAHGMIIAAEAGIEGARALLPEVADALIRLEGQSLESRLPTN
Ga0318547_106953541	3300031781	Soil	MDYATSSGGLMVHSRKDWPCAGCRPDVISDGRGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALVLLELPLAAFQ
Ga0310917_111169201	3300031833	Soil	GWPCAGCRPDLISDGRGFCLCVECAHGVISAAEAGSEGARALLDDVTDALVLLECPLAAFQGPLN
Ga0315290_104699052	3300031834	Sediment	MEYGMSTNGLTVHSRKDWPCANCRPAGCSEGRGFWLCAHCAHGMIHAAEAGVEDARALLDDVTDALAMLEYRPGATAPPM
Ga0315280_1000042350	3300031862	Sediment	MDYAISPGGLMVHAREDWPCAVCRPHMTTECKGFWMCLKCAHNMIFAAEAGVESARALLDDVTDALALLEVQSQEATFSAG
Ga0315280_100126209	3300031862	Sediment	MDYVMSPGGLLVHTREDWPCAVCRPGEIMEGRGYCLCMECAHSVIVAAGAGVEDARALLDDITDALVLFGNGFSRSSLPVN
Ga0315280_100365542	3300031862	Sediment	MDYAVSRGGLLVHDRRDWPCALCRPQAISECRGFCLCSRCAHGMIVAAEAGIEGARALLDDVTDALVLLEAQSLEARPSLN
(restricted) Ga0315310_100443982	3300031876	Sediment	MAEDWRQTMDYAVSRGGLLVHDRRDWPCALCRPQAISEYRGFCLCSRCAHGMIIAAEAGIEGARNLLEDVTDALVRLEGQSLQAKLTLN
(restricted) Ga0315314_10035174	3300031877	Sediment	MDYAVSPGGLLVHARRDWPCALCRPQDIPECQGLWLCVHCAHGIVIAAEAGVEGARALLDDITDALVRLEGSGVETRMASN
(restricted) Ga0315314_11987532	3300031877	Sediment	MEYAVSPGGLLVHIRRDWPCAMCRPDHASERRGLWLCLRCAHHVIVAAEAGVDGARALLGDVTDALGLLEGLPRERPAVLN
Ga0306923_109456971	3300031910	Soil	KIAPKEWEGKAAMDYATSSGGLMVHSRSDWPCAGCRPDLISDGRGFCLCLKCAHGIISAAEAGSEGARALLDDVTDALVLLELPLAAFQGPLN
Ga0310912_100688984	3300031941	Soil	MDYATSSGGLMVHSRSDWPCAGCRPDLISDGRGFCLCLKCAHGIISAAEAGSEGARALLDDVTDAL
Ga0310909_102216722	3300031947	Soil	MDYATSSGGLMVHSRKDWPCAGCRPDVISDGRGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALVLLELPLAAFQGPVN
Ga0214473_107986352	3300031949	Soil	MEYGMSTNGLTVHSRKDWPCANCRPAGCFEGRGFWLCAQCAQGMIHAAEAGIEDARALLDDVTDALAMLEYRPGAIAPPM
Ga0214473_117060541	3300031949	Soil	GLTVHNRKDWPCAVCRPDRGSESRGFGLCSQCAQGMILAAQAGVEDARALLDDVTDALAMLEFRPEAEELPV
Ga0310911_101348132	3300032035	Soil	MDYVTSSGGLMVHSRSDWPCAGCRPDLISDGRGFCLCLKCAHGIISAAEAGSEGARALLDDVTDALVLLELPLAAFQGPLN
Ga0315284_118122321	3300032053	Sediment	MEYAMAPSGLMVHKREDWPCAVCRPDRNSEGRGFWLCAHCAHGMIFAVEAGVEEARDLLGDVTDALALLEVHTTLEGTPAN
Ga0315282_100002885	3300032069	Sediment	MEYAMAPSGLMVHKREDWPCAVCRPDQNSEGRGFWLCAHCAHGMIFAVEAGVEEARALLGDVTDALALLEVQTTLERTPAN
Ga0315282_100764262	3300032069	Sediment	MDYAISPGGLMVHAREDWPCAVCRPHMTTECKGFWMCLKCAHNMIFAAEAGVESARALLDNVTDALALLEAQSQEAAFSAG
Ga0315282_104181502	3300032069	Sediment	MDYAMSPGGLTVHTRQDWPCAVCRPDRISEGKGFWLCAHCAHGMIFAAEAGVEDARAMLDDVTDALALLEVHTTPEALPPN
Ga0315282_104728041	3300032069	Sediment	ITPGGLMVHAREDWPCAVCRPDMASECKGFWMCLKCAHGMIFAAEAGVENARELLDDVTDALALLEAQAQGAVPFAE
Ga0315279_100363823	3300032070	Sediment	MEYAMSPGGLMVHTRKDWPCAICKPDRISEGRGFWLCAHCAQGMIFAAEAGVEDARALLDDVTDALALLEYQAGPASSPPI
Ga0315279_104993742	3300032070	Sediment	VDYAVSRGGLLVHARQDWPCAVCRPQGSSEARGFWLCARCAHGMIIAAEAGVEAARALLDDVTDALVRLEGDLPQAKLAIN
Ga0315279_105904612	3300032070	Sediment	MDYAMSPGGLTVHTRQDWPCAVCRPNRISEGKGFWLCAHCAHGMIFAAEAGVEDARALLDDVTDALALLEVHTTLEATPPN
Ga0306924_104515213	3300032076	Soil	GLMVHSRKDWPCAGCRPDVISDGRGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALVLLELPLAAFQGPVN
Ga0306924_119681341	3300032076	Soil	MDYATSSGGLMVHSRSDWPCASCRPDLFSDGRGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALVLLELPLAAFRGPLN
Ga0315295_118719441	3300032156	Sediment	MDYAVSHGGLLVHARKDWPCAVCRPQGMSEGRGFWLCAHCAHGMIVAAEAGIEGARALLPEVADALIRLEGQSLDSRLPTN
Ga0315295_120148051	3300032156	Sediment	LVLRSEGRRQRMDYAMSPGGLMVHTRKDWPCAVCKPDRISEGRGFWLCAHCAQGMIFAAEAGVEDARALLDDVTDALALLEYQAGQAATPPM
Ga0315281_100777483	3300032163	Sediment	MDYAVSHGGLLVHARKDWPCAVCRPQGISEGRGFWLCANCAHGMIVAAEAGIEGARDLLPEVGDALFSLESQSLESRLLTN
Ga0315281_101067262	3300032163	Sediment	MDYAMSPGGLTVHTREDWPCAVCRPNRVSEGRGFWLCAHCAHGMIFAAEAGVEDARALLDDVTDALALLEVHTTLEATPPN
Ga0315281_108584592	3300032163	Sediment	SRAEDRRQTMDYAVSRGGLLVHDRRDWPCALCRPQAISECRGFCLCSRCAHGMIVAAEAGIEGARALLDDVTDALVLLEAQSLEARPSLN
Ga0315268_1000178622	3300032173	Sediment	MDYAVSRGGLLVHDRRDWPCALCRPQAISECRGFWLCSRCAHGVIIAAEAGIEGAQGLLEDVTDALIRLEGQSLPPGLTPN
Ga0315268_100576872	3300032173	Sediment	MDYAITPGGLMVHAREDWPCAVCRPDMASECKGFWMCLKCAHNMIFAAEAGVENAREILDDVTDALALLEAQVQMLSPA
Ga0315268_106806142	3300032173	Sediment	MEYAMSPGGLMVHTRKDWPCAICKPDRISEGRGFWLCAHCAQGMIFAAEAGVEDARALLDDVTDALALLEYQA
Ga0315275_106007911	3300032401	Sediment	MEYAMSPGGLMVHTRKDWPCAICKPDRASESRGFWLCAHCAQGMIFAAEAGIEDARALLDDVTDALALLEYQAGPASSPPI
Ga0315275_108035241	3300032401	Sediment	MDYAVSHGGLLVHARKDWPCAVCRPEGISEGRGFWLCAHCAHGMIVAAEAGIEGARALLPEVADALI
Ga0315275_109447401	3300032401	Sediment	AMSPGGLTVHTRQDWPCAVCRPNRVSEGRGFWLCAHCAHGMIFAAEAGVEDARALLDDVTDALALLEVHTTLEATPPN
Ga0315275_121119402	3300032401	Sediment	VLVSECRRPTMEYAMSPGGLMVHTRKDWPCAVCRPQRFSEGRGFSLCAHCAQGMIFAAEAGIEDARALLDDVTDALALLEYQAGPASSPPI
Ga0315273_123193601	3300032516	Sediment	MESDLLVLYSEGRRQTMEYGMSTNGLTVHSRKDWPCANCRPAGCSEGRGFWLCAHCAHGMIHAAEAGVEDARALLDDVTDALAMLEYRPGATAPPM
Ga0334722_100210617	3300033233	Sediment	MEYAMSPGGLMVHTRKDWPCAVCRPDRASESRGFWLCAHCAQGMIFAAEAGIEDARALLDDVTDALAILEYQAGPASSPPI
Ga0310914_100499091	3300033289	Soil	MDYATSSGGLMVHSRSDWPCAGCRPDLISDGRGFCLCLKCAHGIISAAEAGSEGARALLDDVTDALILLELPLAAFQGPLN
Ga0310914_117989331	3300033289	Soil	MDYATSSGGLMVHSRTDWPCAGCRPDLISDGRGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALVL
Ga0318519_109236532	3300033290	Soil	RQEAAMDYATSSGGLMVHSRSDWPCASCRPDLISDGRGFCLCVKCAHGVISAAEAGSEGARALLDDVTDALVLLELPLAAFRGPLN
Ga0316620_118407472	3300033480	Soil	MDYAVSHGGLLVHARKDWPCAVCRPEGISEGRGFWLCANCAHGMIVAAEAGIEGARALLPEVADALFSLEGQSLESGLPTN
Ga0316624_101319632	3300033486	Soil	MEYAMSPGGLMVHTRKDWPCAICRPQRNSEGRGFWLCAHCAQGMIFAAEAGIEDARALLDDVTDALALLEYQAGPASSPPI
Ga0316624_114808632	3300033486	Soil	NMDYAITPGGLMVHAREDWPCAICRPHMTTERKGFWMCLKCAHNIIIAAEAGVENARELLDDVTDALALLEAQTQGAVPFAE
Ga0316630_118570091	3300033487	Soil	MDHAISPCGLTVHNRKDWPCAVCRPDRSSESRGFGLCSQCAQGMIIAAQAGVEDARALLNDVTDALAMLEYRPEAQAQPI
Ga0299912_102008363	3300033489	Soil	VDYAISRGGLLVHARRDWPCAVCRPQGSSEARGFWLCARCAHGMIIAAEAGVEAARALLDDVTDALLRLEGDLPQAKLAIN
Ga0316628_1003470102	3300033513	Soil	MDYAVSHGGLLVHARKDWPCAVCRPQGMSEGRGFWLCAHCAHGMIVAAEAGIEGARALLPEVADALFSLEGQSLESNLPMN
Ga0316628_1007018312	3300033513	Soil	MDYAISPGGLMVHDREDWPCAVCRPHLTMECKGFFLCLKCAHNMIFAAEAGVASARELLDDVTDALGLLEAQAQTLSAD
Ga0316628_1031629621	3300033513	Soil	MGYAVSPGGLTVHNRKDWPCAVCRPERSSESRGFGLCSQCAQGMIIAAQAGVEDARALLDDLTDAL
Ga0316628_1042004071	3300033513	Soil	MGYAVSPGGLTVHNRKDWPCAVCRPDRSSESRGFGLCSQCAQGMIIAAQAGVEDARALLNDVTD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters