Metagenome / Metatranscriptome Family F102699

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102699
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	59 residues
Representative Sequence	MHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVVSVSTNHD
Number of Associated Samples	73
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	38.61 %
% of genes near scaffold ends (potentially truncated)	28.71 %
% of genes from short scaffolds (< 2000 bps)	74.26 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (87.129 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (17.822 % of family members)
Environment Ontology (ENVO)	Unclassified (46.535 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (53.465 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 0.00% Coil/Unstructured: 75.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00383	dCMP_cyt_deam_1	17.82
PF11750	DUF3307	17.82
PF02511	Thy1	2.97
PF09643	YopX	1.98
PF13692	Glyco_trans_1_4	0.99
PF07460	NUMOD3	0.99
PF00456	Transketolase_N	0.99
PF00149	Metallophos	0.99
PF07963	N_methyl	0.99
PF05496	RuvB_N	0.99
PF13412	HTH_24	0.99
PF13524	Glyco_trans_1_2	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	2.97
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.99
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	0.99
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.03 %
Unclassified	root	N/A	2.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.09 %
Viruses	superkingdom	All Organisms → Viruses	5.94 %
Unclassified	root	N/A	2.97 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	87.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.96 %
Unclassified	root	N/A	2.97 %

Name	Rank	Taxonomy	Distribution
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	87.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.96 %
Unclassified	root	N/A	2.97 %

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	87.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.96 %
Unclassified	root	N/A	2.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573028\|GS313G0146KB_1112119104850	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	939	Open in IMG/M
3300001843\|RCM34_1134191	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	725	Open in IMG/M
3300001851\|RCM31_10185042	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	755	Open in IMG/M
3300001968\|GOS2236_1067883	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1454	Open in IMG/M
3300002382\|B570J29648_102834	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	968	Open in IMG/M
3300002408\|B570J29032_108793747	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	511	Open in IMG/M
3300002408\|B570J29032_109591898	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	910	Open in IMG/M
3300002408\|B570J29032_109781764	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1304	Open in IMG/M
3300002835\|B570J40625_100023335	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10243	Open in IMG/M
3300002835\|B570J40625_100576052	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1037	Open in IMG/M
3300002835\|B570J40625_100750705	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	865	Open in IMG/M
3300002835\|B570J40625_101172889	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	645	Open in IMG/M
3300005581\|Ga0049081_10275361	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300005582\|Ga0049080_10238881	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	595	Open in IMG/M
3300005662\|Ga0078894_10087048	All Organisms → cellular organisms → Bacteria	2732	Open in IMG/M
3300005758\|Ga0078117_1010539	All Organisms → Viruses → Predicted Viral	1647	Open in IMG/M
3300005758\|Ga0078117_1053071	All Organisms → Viruses → Predicted Viral	1908	Open in IMG/M
3300005805\|Ga0079957_1016159	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	5379	Open in IMG/M
3300005805\|Ga0079957_1020704	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4598	Open in IMG/M
3300006875\|Ga0075473_10231509	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300007202\|Ga0103274_1214411	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1657	Open in IMG/M
3300007973\|Ga0105746_1113842	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	895	Open in IMG/M
3300008107\|Ga0114340_1234583	Not Available	575	Open in IMG/M
3300008111\|Ga0114344_1241283	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	530	Open in IMG/M
3300008113\|Ga0114346_1041307	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2356	Open in IMG/M
3300008116\|Ga0114350_1097890	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1732	Open in IMG/M
3300008120\|Ga0114355_1168259	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	752	Open in IMG/M
3300008261\|Ga0114336_1106458	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1309	Open in IMG/M
3300009051\|Ga0102864_1217669	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	520	Open in IMG/M
3300009168\|Ga0105104_10965394	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	503	Open in IMG/M
3300010354\|Ga0129333_10188931	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1877	Open in IMG/M
3300013004\|Ga0164293_10046744	All Organisms → Viruses → Predicted Viral	3510	Open in IMG/M
3300013004\|Ga0164293_10142336	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1791	Open in IMG/M
3300013005\|Ga0164292_10442713	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	860	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10029250	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4864	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10859918	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	563	Open in IMG/M
3300017766\|Ga0181343_1173730	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	595	Open in IMG/M
3300017788\|Ga0169931_10516810	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	836	Open in IMG/M
3300020074\|Ga0194113_10000333	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	60188	Open in IMG/M
3300020159\|Ga0211734_10846210	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	6453	Open in IMG/M
3300020159\|Ga0211734_10872270	All Organisms → Viruses → Predicted Viral	2122	Open in IMG/M
3300020159\|Ga0211734_11219704	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1363	Open in IMG/M
3300020161\|Ga0211726_10419187	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1401	Open in IMG/M
3300020172\|Ga0211729_10931184	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	782	Open in IMG/M
3300020183\|Ga0194115_10017631	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	5808	Open in IMG/M
3300020183\|Ga0194115_10026015	Not Available	4324	Open in IMG/M
3300020506\|Ga0208091_1007920	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1367	Open in IMG/M
3300020515\|Ga0208234_1009829	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1197	Open in IMG/M
3300020530\|Ga0208235_1045862	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	508	Open in IMG/M
3300020531\|Ga0208487_1004384	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2100	Open in IMG/M
3300020549\|Ga0207942_1019139	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	878	Open in IMG/M
3300020550\|Ga0208600_1012246	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1380	Open in IMG/M
3300020578\|Ga0194129_10621419	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	501	Open in IMG/M
3300021424\|Ga0194117_10000377	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	60163	Open in IMG/M
3300021956\|Ga0213922_1033762	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1209	Open in IMG/M
3300021961\|Ga0222714_10034431	All Organisms → Viruses → Predicted Viral	3715	Open in IMG/M
3300021961\|Ga0222714_10400403	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	725	Open in IMG/M
3300021962\|Ga0222713_10050559	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3177	Open in IMG/M
3300021962\|Ga0222713_10068246	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2639	Open in IMG/M
3300021962\|Ga0222713_10518014	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	710	Open in IMG/M
3300021963\|Ga0222712_10001914	Not Available	24811	Open in IMG/M
3300021963\|Ga0222712_10003185	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	18092	Open in IMG/M
3300021963\|Ga0222712_10034653	All Organisms → cellular organisms → Bacteria	3941	Open in IMG/M
3300021963\|Ga0222712_10156483	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1532	Open in IMG/M
3300021963\|Ga0222712_10387036	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	853	Open in IMG/M
3300021963\|Ga0222712_10679163	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	583	Open in IMG/M
3300021963\|Ga0222712_10807088	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	516	Open in IMG/M
3300024357\|Ga0255165_1072643	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	551	Open in IMG/M
3300024550\|Ga0255266_1104689	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	655	Open in IMG/M
3300025889\|Ga0208644_1051962	All Organisms → Viruses → Predicted Viral	2265	Open in IMG/M
3300026569\|Ga0255277_1049628	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1093	Open in IMG/M
3300027131\|Ga0255066_1041233	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	646	Open in IMG/M
3300027659\|Ga0208975_1178773	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	578	Open in IMG/M
(restricted) 3300027730\|Ga0247833_1039761	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2758	Open in IMG/M
3300027804\|Ga0209358_10268522	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	851	Open in IMG/M
3300029930\|Ga0119944_1008029	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1639	Open in IMG/M
3300029933\|Ga0119945_1007718	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1445	Open in IMG/M
3300029933\|Ga0119945_1021759	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	762	Open in IMG/M
3300031784\|Ga0315899_10038149	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	5052	Open in IMG/M
3300031857\|Ga0315909_10021210	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	6529	Open in IMG/M
3300031951\|Ga0315904_10792085	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	781	Open in IMG/M
3300031951\|Ga0315904_10803725	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	774	Open in IMG/M
3300031963\|Ga0315901_10430279	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1049	Open in IMG/M
3300031963\|Ga0315901_10933456	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	614	Open in IMG/M
3300032093\|Ga0315902_10554740	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	980	Open in IMG/M
3300032093\|Ga0315902_11024625	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	617	Open in IMG/M
3300032116\|Ga0315903_10290625	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1387	Open in IMG/M
3300032116\|Ga0315903_10324725	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1288	Open in IMG/M
3300032116\|Ga0315903_10639273	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	808	Open in IMG/M
3300033816\|Ga0334980_0021328	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2780	Open in IMG/M
3300033816\|Ga0334980_0105806	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1168	Open in IMG/M
3300033993\|Ga0334994_0108447	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1619	Open in IMG/M
3300033996\|Ga0334979_0303008	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	907	Open in IMG/M
3300033996\|Ga0334979_0647281	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	556	Open in IMG/M
3300034018\|Ga0334985_0555531	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	649	Open in IMG/M
3300034061\|Ga0334987_0070445	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2798	Open in IMG/M
3300034095\|Ga0335022_0557055	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	587	Open in IMG/M
3300034101\|Ga0335027_0435351	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	840	Open in IMG/M
3300034109\|Ga0335051_0509315	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	559	Open in IMG/M
3300034122\|Ga0335060_0091673	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1844	Open in IMG/M
3300034200\|Ga0335065_0528431	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	700	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	81.19%
Marine	Environmental → Aquatic → Marine	18.81%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	39.60%
Lentic	Environmental → Aquatic → Freshwater → Lentic	19.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.88%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	10.89%
River	Environmental → Aquatic → Freshwater → River	3.96%
Coastal	Environmental → Aquatic → Marine → Coastal	3.96%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	2.97%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.97%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Creek	Environmental → Aquatic → Freshwater → Creek	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	38.61%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.88%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	10.89%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	10.89%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	8.91%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.98%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	17.82%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	11.88%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	10.89%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	10.89%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	5.94%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	5.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.95%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.97%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	2.97%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.97%
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	2.97%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	1.98%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	1.98%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	1.98%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.99%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.99%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.99%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.99%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.99%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.99%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.99%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573028	Estuarine microbial communities from Columbia River, sample from South Channel ETM site, CMGS313-FOS-0p8-ETM-15m	Environmental	Open in IMG/M
3300001843	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM34, ROCA_DNA218_2.0um_bLM_C_2b	Environmental	Open in IMG/M
3300001851	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM31, ROCA_DNA206_0.2um_MCP-S_C_3b	Environmental	Open in IMG/M
3300001968	Marine microbial communities from Lake Gatun, Panama - GS020	Environmental	Open in IMG/M
3300002382	Freshwater microbial communities from Lake Mendota, WI - 26OCT2009 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005758	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007202	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Monthly Sampling-Site C) 9 sequencing projects	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020183	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surface	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020515	Freshwater microbial communities from Lake Mendota, WI - 27SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020530	Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020531	Freshwater microbial communities from Lake Mendota, WI - 21SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020549	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020550	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020578	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35m	Environmental	Open in IMG/M
3300021424	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surface	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300024357	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8d	Environmental	Open in IMG/M
3300024550	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300026569	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027131	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepA_8h	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027730 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_8m	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300029930	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727	Environmental	Open in IMG/M
3300029933	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727_2	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034109	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GS313G0146KB_00180190	2189573028	Marine Estuarine	MHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVVTVSTNHD
RCM34_11341912	3300001843	Marine Plankton	MSDQPFFYLSLDLPKSFSREDAEKIKDDVLDFLEAKRHYGAKYDGKTGITVKITSVRVNHD*
RCM31_101850423	3300001851	Marine Plankton	MSDQPFFYLSLDLPKSFSREDAEKIKDDVLDFLESKKHYGAKYDGKTGITVKITSVRVNHD*
GOS2236_10678833	3300001968	Marine	MSDQPFFYLSLDLPKSFSREDAEKIKNDVLDFLESKKHYGAKYDGKTGITVKITSVRVNHD*
B570J29648_1028344	3300002382	Freshwater	MHQPNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVITV
B570J29032_1087937473	3300002408	Freshwater	DLPKNFTREDAEKIQKDVLDFLEGKRHYGAKYDGKNGITVKIVSVSTNHD*
B570J29032_1095918981	3300002408	Freshwater	TICCTMFYIKNVMNYQPNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVVSVSTNHD*
B570J29032_1097817644	3300002408	Freshwater	MFYIKNVMNYQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKTGITVNVITASTNHD*
B570J40625_10002333513	3300002835	Freshwater	MHQPNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVITVSTNHD
B570J40625_1005760524	3300002835	Freshwater	MDSVQVMHQPSFYLSLDLPKNFTREDAEKIQKDVLDFLEGKRHYGAKYDGKNGITVKIVSVSTNH
B570J40625_1007507051	3300002835	Freshwater	MNYQPNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVVSVSTNHD*
B570J40625_1011728892	3300002835	Freshwater	MFYIKNVMNHQPNFYLTLDLPKNFTREDAEKIQKDVLDFLETKRHYGAKYDGKSGITVKVVSVSTNHD*
Ga0049081_102753613	3300005581	Freshwater Lentic	LNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVVTVSTNHD*
Ga0049080_102388813	3300005582	Freshwater Lentic	MDNIQAMHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVITVSTNHD*
Ga0078894_100870486	3300005662	Freshwater Lake	MHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLEGKRHYGAKYDGKAGITVNVITVSTNHD
Ga0078117_10105392	3300005758	Lake Water	MHKPSFYLTLDLPKSFTREDAEKIQKDVLDFLEGKRHYGAKYDGKNGITVKIISVSTNHD
Ga0078117_10530714	3300005758	Lake Water	MREPNFYLTLDLPKNFNREDAEKIRNEVLDFLNSKNYDGAKSDGKNNFTVKIVSVSTNHD
Ga0079957_10161592	3300005805	Lake	MHEPSFYLSLNLPKNFTREDAEKIRKDVLDFLEGKRHYGAKYDGKNGITVKVISVSTNHD
Ga0079957_102070411	3300005805	Lake	MREPNFYLTLDLPKTFTREDAEKIRDDLLDFLASKKHYGAKYDGKNGIVVKIISVSTNHD
Ga0075473_102315091	3300006875	Aqueous	MHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVVSVSTNHD
Ga0103274_12144111	3300007202	Freshwater Lake	MDNIQAMHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVVSVSTNHD*
Ga0105746_11138421	3300007973	Estuary Water	MDSVQVMHQPSFYLSLDLPKNFTREDAEKIQKDVLDFLEGKRHYGAKYDGKNGITVKIVSVSTNHD*
Ga0114340_12345833	3300008107	Freshwater, Plankton	MNNPFFYLTIDLPKSFSREDAEKIQKDMLDFLEEKHHYGAKYNGKDGIKVKVIS
Ga0114344_12412832	3300008111	Freshwater, Plankton	MHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKTGITVNVITVSTNHD
Ga0114346_10413076	3300008113	Freshwater, Plankton	MNHQPNYYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVITVSTNHD*
Ga0114350_10978901	3300008116	Freshwater, Plankton	MHEPSFYLSLDLPKNFTREDAEKIRKDVLDFLEGKRHYGAKYDGKNGITVKVIS
Ga0114355_11682593	3300008120	Freshwater, Plankton	MHQPNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNIVSVSTNHD
Ga0114336_11064584	3300008261	Freshwater, Plankton	MHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVITVSTNHD
Ga0102864_12176693	3300009051	Estuarine	YLSLDLPKNFTREDAEKIQKDVLDFLEGKRHYGAKYDGKNGITVKIVSVSTNHD*
Ga0105104_109653942	3300009168	Freshwater Sediment	MNHQPNYYLTLDLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKNGITVKVISISTNHD*
Ga0129333_101889311	3300010354	Freshwater To Marine Saline Gradient	NYYLTLNLPKGFSREDAEKIQKDVLDFLEGKRHYGAKYDGKAGITVNIVSVSTNHD*
Ga0164293_100467443	3300013004	Freshwater	MHQPSFYLSLDLPKNFTREDAEKIRKDVLDFLEGKRHYGAKYDGKNGITVKVVSVSTNHD
Ga0164293_101423363	3300013004	Freshwater	MHEPSFYLNLDLPKNFTREDAEKIRKDVLDFLEGKRHYGAKYDGKNGITVKVISVSTNHD
Ga0164292_104427133	3300013005	Freshwater	MFYIKNVMNYQPNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVITVSTNHD*
(restricted) Ga0172367_100292504	3300013126	Freshwater	MNNSNFYLTLDLPKNFSRQDAEKIRDDVLDFLEGKRHYGAKYDGKNGITVKVISVSTNHD
(restricted) Ga0172363_108599182	3300013130	Sediment	MNNSNFYLTLDLPKNFSRQDAEKIRDDVLDFLEDKHHYGAKYDGKNGITVKVISVSTNHD
Ga0181343_11737303	3300017766	Freshwater Lake	MYQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVVTVSTNHD
Ga0169931_105168102	3300017788	Freshwater	MNNSNFYLTLDLPKNFSRQDAEKIRDDILDFLEDKRHYGAKYDGKNGITVKVISVSTNHD
Ga0194113_1000033322	3300020074	Freshwater Lake	MNNSNFYLTLDLPKNFSRQDAEKIRDDVLDFLEDKRHYGSKHDGKNGITVKVVSVSTNHD
Ga0211734_1084621012	3300020159	Freshwater	MHEPSFYLSLDLPKNFTREDAEKIRKDVLDFLEGKRHYGAKYDGKNGITVKVISVSTNHD
Ga0211734_108722707	3300020159	Freshwater	MHEPSFYLSLDLPKNFTREDAEKIRKDVLDFLEGKRHYGAKYDGKNGITVKIVSVSTNHD
Ga0211734_112197045	3300020159	Freshwater	MHQPSFYLTLDLPKTFNRDDAEKIKKDMLDFLEGKRHYGAKYDGKTGITVKIISVSTNHD
Ga0211726_104191876	3300020161	Freshwater	HEPSFYLSLDLPKNFTREDAEKIRKDVLDFLEGKRHYGAKYDGKNGITVKVVSVSTNHD
Ga0211729_109311843	3300020172	Freshwater	MHEPSFYLSLDLPKNFTREDAEKIRKDVLDFLEGKRHYGAKYDGKNGITVKVVSVSTNHD
Ga0194115_1001763117	3300020183	Freshwater Lake	MNNSNFYLTLDLPKNFSRQDAEKIRDDVLDFLEDKRHYGAKYDGKNGITVKVISVSTNHD
Ga0194115_100260156	3300020183	Freshwater Lake	MNNINNTDADHATFFYLTLHLPKNFNREEARKIRQDLLDFLDSKRHYGAKYDGKAGISVQITSVSTNHD
Ga0208091_10079204	3300020506	Freshwater	MHQPSFYLSLDLPKNFTREDAEKIQKDLLDFLEGKRHYGAKYDGKNGINIKVISVSTNHD
Ga0208234_10098291	3300020515	Freshwater	MYQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGIT
Ga0208235_10458622	3300020530	Freshwater	MFYIKNVMNYQPNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVITVSTNHD
Ga0208487_10043847	3300020531	Freshwater	MYQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVITVSTNHD
Ga0207942_10191391	3300020549	Freshwater	MHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLEGKRHYGAKYDGKTGITVNVITASTNHD
Ga0208600_10122465	3300020550	Freshwater	MFYIKNVMNYQPNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVVSVSTNHD
Ga0194129_106214193	3300020578	Freshwater Lake	KFNKMNNSNFYLTLDLPKNFSRQDAEKIRDDVLDFLEDKRHYGAKYDGKNGITVKVISVSTNHD
Ga0194117_1000037780	3300021424	Freshwater Lake	MNNSNFYLTLDLPKNFSRQDAEKIRDDVLDFLEDKRHYGSKHDGKNGITVKVISVSTNHD
Ga0213922_10337624	3300021956	Freshwater	MHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLEGKRHYGAKYDGKAGITVNIVSVSTNHD
Ga0222714_100344315	3300021961	Estuarine Water	MHQPSFYLSLDLPKNFTREDAEKIRKDVLDFLEGKRHYGAKYDGKNGITVKVISVSTNHD
Ga0222714_104004031	3300021961	Estuarine Water	MSDPNFYLTLDLPKNFSREDAEKIRNDLLDFLESKRHYGAKYDGKNGIVVKITSVSTNHD
Ga0222713_100505591	3300021962	Estuarine Water	TLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNIVSVSTNHD
Ga0222713_100682464	3300021962	Estuarine Water	MDNIQAMYQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVVSVSTNHD
Ga0222713_105180144	3300021962	Estuarine Water	SFYLSLNLPKNFTREDAEKIRKDVLDFLEGKRHYGAKYDGKNGITVKVISVSTNHD
Ga0222712_1000191445	3300021963	Estuarine Water	MYQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVVSVSTNHD
Ga0222712_1000318513	3300021963	Estuarine Water	MHKPSFYLTLDLPKTFTREDAEKIRDDFLDFLSSKKHYGAKYDGKNGIAVKIISVSTNHD
Ga0222712_100346531	3300021963	Estuarine Water	MHQPNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNV
Ga0222712_101564834	3300021963	Estuarine Water	MHKPSFYLTLDLPKTFTREDAEKIQKDVLDFLEGKRHYGAKYDGKTGIAVKIISVSTNHD
Ga0222712_103870361	3300021963	Estuarine Water	MNHQPNYYLTLDLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKNGITVKVISI
Ga0222712_106791632	3300021963	Estuarine Water	MDSVQVMHQPSFYLSLDLPKNFTREDAEKIQKDVLDFLEGKRHYGAKYDGKNGITVKIVSVSTNHD
Ga0222712_108070881	3300021963	Estuarine Water	LPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVITVSTNHD
Ga0255165_10726433	3300024357	Freshwater	TLNLPKGFSREDAEKIQKDVLDFLEGKRHYGAKYDGKAGITVNIVSVSTNHD
Ga0255266_11046891	3300024550	Freshwater	HQPNYYLTLNLPKGFSREDAEKIQKDVLDFLEGKRHYGAKYDGKAGITVNIVSVSTNHD
Ga0208644_10519624	3300025889	Aqueous	MREPNFYLTLDLPKNFNREDAEKIRDEVLDFLNSKNYDGAKSDGKNNFTVKIVTVSTNHD
Ga0255277_10496283	3300026569	Freshwater	MDNIQAMHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLEGKRHYGAKYDGKAGITVNIVSVSTNHD
Ga0255066_10412332	3300027131	Freshwater	MNHQPSFYLSLDLPKNFTREDAEKIQKDILDFLEGKRHYGAKYDGKNGITVKIVSVSTNH
Ga0208975_11787733	3300027659	Freshwater Lentic	LNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVVTVSTNHD
(restricted) Ga0247833_10397611	3300027730	Freshwater	MDNIQVMHEPSFYLSLNLPKNFTREDAEKIRKDVLDFLEGKRHYGAKYDGKNGITVKVISVSTNHD
Ga0209358_102685223	3300027804	Freshwater Lake	MHQPNFYLTLNLPKGFSREDAEKIQKDVLDFLEGKRHYGAKYDGKTGITVNVITVSTNHD
Ga0119944_10080295	3300029930	Aquatic	MREPNFYLTLDLPKTFTREDAEKIQKDVLDFLEGKRHYGAKYDGKPGITLKIISVSTNHD
Ga0119945_10077183	3300029933	Aquatic	MHKPSFYLTLDLPKTFTREDAEKIRNDLLDLLESKKHYGAKYDGKNGIVVKIISVSTNHD
Ga0119945_10217591	3300029933	Aquatic	MHKPSFYLSLDLPKNFTREEAEKIREDLLDFLDSKRHYGAKYDGKAGITVKIISVSTNHD
Ga0315899_1003814915	3300031784	Freshwater	MHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLEGKRHYGAKYDGKTGITVNVITVSTNHD
Ga0315909_100212109	3300031857	Freshwater	MNNPFFYLTIDLPKSFSREDAEKIQKDMLDFLEEKHHYGAKYNGKDGIKVKVISVSTNND
Ga0315904_107920851	3300031951	Freshwater	YYLTLNLPKGFSREDAEKIQKDVLDFLEGKRHYGAKYDGKTGITVNVITVSTNHD
Ga0315904_108037253	3300031951	Freshwater	MNHQPNYYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVITVSTNH
Ga0315901_104302793	3300031963	Freshwater	MDNIQAMHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVVTVSTNHD
Ga0315901_109334561	3300031963	Freshwater	YLTLDLPKNFSREDAEKIRNDLLDFLESKRHYGAKYDGKNGIVVKITSVSTNHD
Ga0315902_105547404	3300032093	Freshwater	LNLPKGFSREDAEKIQKDVLDFLEGKRHYGAKYDGKTGITVNVITVSTNHD
Ga0315902_110246251	3300032093	Freshwater	PNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVITVSTNHD
Ga0315903_102906255	3300032116	Freshwater	HQPNYYLTLNLPKGFSREDAEKIQKDVLDFLEGKRHYGAKYDGKTGITVNVITVSTNHD
Ga0315903_103247254	3300032116	Freshwater	MDNIQAMHQSNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNVVTVSTNHD
Ga0315903_106392731	3300032116	Freshwater	MHQPNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGIT
Ga0334980_0021328_810_1016	3300033816	Freshwater	MFYIKNVMNHQPNFYLTLDLPKNFTREDAEKIQKDVLDFLETKRHYGAKYDGKSGITVKVVSVSTNHD
Ga0334980_0105806_448_633	3300033816	Freshwater	MNYQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKTGITVNVITASTNH
Ga0334994_0108447_634_819	3300033993	Freshwater	MNYQPNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVITVSTNH
Ga0334979_0303008_726_905	3300033996	Freshwater	YQPNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVITVSTNHD
Ga0334979_0647281_337_519	3300033996	Freshwater	MHQPSFYLTLDLPKNFTREDAEKIQKDVLDFLEGKRHYGAKYDGKNGITVKIVSVSTNHD
Ga0334985_0555531_473_649	3300034018	Freshwater	MHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLEGKRHYGAKYDGKTGITVNVITVSTNH
Ga0334987_0070445_1400_1582	3300034061	Freshwater	MHQPSFYLSLDLPKNFTREDAEKIQKDVLDFLEGKRHYGAKYDGKNGITVKIVSVSTNHD
Ga0335022_0557055_217_399	3300034095	Freshwater	MHQPSFYLSLDLPKNFTREDAEKIQKDVLDFLEGKRHYGAKYDGKNGITVKVISISTNHD
Ga0335027_0435351_370_552	3300034101	Freshwater	MHQPNFYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKAGITVNIVSVSTNHD
Ga0335051_0509315_411_557	3300034109	Freshwater	PKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKAGITVNVITVSTNHD
Ga0335060_0091673_1218_1400	3300034122	Freshwater	MHQPNYYLTLNLPKGFSREDAEKIQKDVLDFLESKRHYGAKYDGKTGITVNVITASTNHD
Ga0335065_0528431_250_432	3300034200	Freshwater	MHQPNFYLTLNLPKGFSREDAEKIQKDLLDFLESKRHYGAKYDGKTGITVNVITVSTNHD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters