Metagenome / Metatranscriptome Family F102626

Overview

Basic Information

• Family ID: F102626
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 101
• Average Sequence Length: 46 residues
• Representative Sequence: MATGRVPTTANSPLTAKGDLFTYSTAPARLAVGNDGETLVADSST
• Number of Associated Samples: 67
• Number of Associated Scaffolds: 101

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 100.00 %
• % of genes near scaffold ends (potentially truncated): 100.00 %
• % of genes from short scaffolds (< 2000 bps): 93.07 %
• Associated GOLD sequencing projects: 66
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (52.475 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (35.644 % of family members)
• Environment Ontology (ENVO): Unclassified (76.238 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (64.356 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 15.56%
  Coil/Unstructured: 84.44%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF16778	Phage_tail_APC	7.92
PF09636	XkdW	2.97
PF00534	Glycos_transf_1	0.99
PF02018	CBM_4_9	0.99

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
All Organisms	root	All Organisms	47.52 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Viruses	superkingdom	All Organisms → Viruses	45.54 %
cellular organisms	root	All Organisms → cellular organisms	1.98 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	34.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.98 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	34.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	34.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	34.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	33.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.99 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.99 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	33.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.99 %
Freshwater phage uvFW-CGR-AMD-COM-C455	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C455	0.99 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002835|B570J40625_100650672	Not Available	954
3300005528|Ga0068872_10161547	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1299
3300005805|Ga0079957_1074546	All Organisms → cellular organisms → Bacteria	1945
3300007171|Ga0102977_1167823	All Organisms → Viruses → Predicted Viral	1498
3300007304|Ga0102689_1845657	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	790
3300008259|Ga0114841_1099464	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1267
3300008266|Ga0114363_1150752	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	772
3300009081|Ga0105098_10562049	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	589
3300009152|Ga0114980_10535535	Not Available	665
3300009159|Ga0114978_10276440	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1035
3300009183|Ga0114974_10086832	All Organisms → Viruses → Predicted Viral	2029
3300009450|Ga0127391_1019667	Not Available	1395
3300010370|Ga0129336_10135031	All Organisms → Viruses → Predicted Viral	1432
3300010370|Ga0129336_10265488	Not Available	961
3300010885|Ga0133913_13292481	Not Available	1063
3300011184|Ga0136709_1031093	Not Available	737
3300012711|Ga0157607_1191596	Not Available	536
3300013004|Ga0164293_10238562	Not Available	1290
3300013004|Ga0164293_10603457	Not Available	713
3300015243|Ga0180041_156719	Not Available	502
3300017701|Ga0181364_1017877	Not Available	1175
3300017701|Ga0181364_1065867	Not Available	557
3300017701|Ga0181364_1076534	Not Available	511
3300017722|Ga0181347_1037187	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1501
3300017722|Ga0181347_1159843	Not Available	611
3300017723|Ga0181362_1037067	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1033
3300017736|Ga0181365_1055379	Not Available	987
3300017761|Ga0181356_1048986	Not Available	1462
3300017761|Ga0181356_1086679	Not Available	1033
3300017774|Ga0181358_1107857	Not Available	991
3300017777|Ga0181357_1101652	Not Available	1089
3300017777|Ga0181357_1136247	Not Available	913
3300017777|Ga0181357_1150663	Not Available	857
3300017778|Ga0181349_1064804	Not Available	1410
3300017778|Ga0181349_1112670	All Organisms → Viruses → Predicted Viral	1009
3300017780|Ga0181346_1103685	Not Available	1102
3300017784|Ga0181348_1157502	Not Available	845
3300017785|Ga0181355_1118060	Not Available	1087
3300017785|Ga0181355_1299682	Not Available	604
3300019784|Ga0181359_1101303	Not Available	1055
3300022179|Ga0181353_1121823	Not Available	623
3300022190|Ga0181354_1052543	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1356
3300022190|Ga0181354_1157171	Not Available	707
3300022190|Ga0181354_1211278	Not Available	572
3300022407|Ga0181351_1069065	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1435
3300022407|Ga0181351_1118269	Not Available	998
3300022752|Ga0214917_10014599	Not Available	6893
3300022752|Ga0214917_10160670	All Organisms → Viruses → Predicted Viral	1170
3300022752|Ga0214917_10182501	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1059
3300022752|Ga0214917_10187565	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1037
3300023174|Ga0214921_10242042	Not Available	1069
3300023174|Ga0214921_10246512	Not Available	1053
3300023174|Ga0214921_10248422	Not Available	1046
3300023174|Ga0214921_10275158	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	962
3300023174|Ga0214921_10296791	Not Available	903
3300023179|Ga0214923_10274635	Not Available	933
3300024505|Ga0255150_1049670	Not Available	672
3300024570|Ga0255276_1025183	All Organisms → Viruses → Predicted Viral	1608
3300026478|Ga0255156_1017116	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1428
3300027467|Ga0255154_1024704	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1401
3300027601|Ga0255079_1056323	Not Available	825
3300027785|Ga0209246_10057269	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1506
3300027785|Ga0209246_10156755	Not Available	894
3300027798|Ga0209353_10164063	Not Available	986
3300027798|Ga0209353_10168882	Not Available	969
3300027808|Ga0209354_10124368	All Organisms → Viruses → Predicted Viral	1053
3300027808|Ga0209354_10263851	Not Available	690
3300027973|Ga0209298_10383190	Not Available	531
3300028025|Ga0247723_1089831	Not Available	793
(restricted) 3300028571|Ga0247844_1051040	All Organisms → Viruses → Predicted Viral	2381
3300029932|Ga0119933_1045645	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	536
3300029933|Ga0119945_1026951	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	664
3300031758|Ga0315907_10811274	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	697
3300031787|Ga0315900_10389614	Not Available	1104
3300031857|Ga0315909_10218828	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1491
3300031857|Ga0315909_10339805	All Organisms → Viruses → Predicted Viral	1102
3300031857|Ga0315909_10528009	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	807
3300031999|Ga0315274_11797009	Not Available	563
3300032116|Ga0315903_10137865	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2261
3300032116|Ga0315903_10313618	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1318
3300033981|Ga0334982_0191770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1015
3300033996|Ga0334979_0073433	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C455	2171
3300033996|Ga0334979_0243960	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1041
3300034012|Ga0334986_0216672	Not Available	1060
3300034012|Ga0334986_0351895	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	764
3300034012|Ga0334986_0398749	Not Available	700
3300034020|Ga0335002_0221515	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1159
3300034061|Ga0334987_0290517	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1089
3300034061|Ga0334987_0348993	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	958
3300034061|Ga0334987_0377010	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	908
3300034062|Ga0334995_0278266	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1109
3300034062|Ga0334995_0315846	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1016
3300034062|Ga0334995_0327961	Not Available	990
3300034066|Ga0335019_0029385	All Organisms → Viruses → Predicted Viral	3797
3300034101|Ga0335027_0106104	Not Available	2133
3300034104|Ga0335031_0731544	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	563
3300034105|Ga0335035_0230009	Not Available	1127
3300034106|Ga0335036_0154203	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1632
3300034106|Ga0335036_0261185	All Organisms → Viruses → Predicted Viral	1168
3300034118|Ga0335053_0701234	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	569
3300034272|Ga0335049_0512643	Not Available	761

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.01%
Terrestrial	Environmental → Terrestrial	0.99%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	96.04%
Marine	Environmental → Aquatic → Marine	1.98%
Unclassified	Environmental → Aquatic → Unclassified	0.99%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.99%

Type

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	44.55%
Lentic	Environmental → Aquatic → Freshwater → Lentic	35.64%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	7.92%
River	Environmental → Aquatic → Freshwater → River	4.95%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	1.98%
Coastal	Environmental → Aquatic → Marine → Coastal	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.99%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	43.56%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	34.65%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	7.92%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.99%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.99%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.99%

Habitat

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	35.64%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	33.66%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	6.93%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.95%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	4.95%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.98%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.99%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.99%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.99%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.99%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.99%
Drinking Water Treatment Plant	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Drinking Water Treatment Plant	0.99%
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	0.99%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.99%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.99%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.99%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental
3300007171	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface layer) 8 sequencing projects	Environmental
3300007304	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaT (Metagenome Metatranscriptome) (version 2)	Environmental
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental
3300009450	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 4m depth; DNA IDBA-UD	Environmental
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental
3300010885	northern Canada Lakes Co-assembly	Environmental
3300011184	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG	Environmental
3300012711	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES133 metaT (Metagenome Metatranscriptome)	Environmental
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental
3300015243	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES148 metaT (Metagenome Metatranscriptome)	Environmental
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental
3300024505	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8h	Environmental
3300024570	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8h (Metagenome Metatranscriptome)	Environmental
3300026478	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8h	Environmental
3300027467	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepB_8h	Environmental
3300027601	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepB_8h	Environmental
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental
3300028571 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch201714.5m_1	Environmental
3300029932	Freshwater microbial communities from drinking water treatment plant - The University of Hong Kong - Raw_water_201207A	Environmental
3300029933	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727_2	Environmental
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental
3300034020	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055	Environmental
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1006506721	3300002835	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVAD
Ga0068872_101615473	3300005528	Freshwater Lake	MATGRVPTTANSPLTAKGDLFTYSTTQARLAVGNDGDTLL
Ga0079957_10745461	3300005805	Lake	VATGRVPTTANSPLTTKGDLFGYSTTQARVAVGSDGDT
Ga0102977_11678231	3300007171	Freshwater Lake	VATGRLPDPNSSPLTAKGDLYTYSTVPAKLAVGNNGETLVADSSA
Ga0102689_18456571	3300007304	Freshwater Lake	MATGRVPTTANSPLTAKGDLFTYSTTQARLAVGNDG
Ga0114841_10994643	3300008259	Freshwater, Plankton	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGSDGDTLVADSAASTGL
Ga0114363_11507521	3300008266	Freshwater, Plankton	LATGRVPTTANSPLTAKGDLFGYSTTQARVAVGSDGDTLVADSAASTGL
Ga0105098_105620491	3300009081	Freshwater Sediment	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVADSSASVGIRYQGNYAAGKNKV
Ga0114980_105355353	3300009152	Freshwater Lake	MATGRVPTTANSPLTAKGDLFTYSTAPARLAVGNNGESLVADSSTST
Ga0114978_102764403	3300009159	Freshwater Lake	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVADSSTSTGLRYQ
Ga0114974_100868326	3300009183	Freshwater Lake	MATGRVPTTANSPLTAKGDLFSYSTAPARLAVGNDGEQIVADSS
Ga0127391_10196674	3300009450	Meromictic Pond	MATGRVPTTANSPLTAKGDLFTYSTAPARLAVGNDGETLVADSST
Ga0129336_101350311	3300010370	Freshwater To Marine Saline Gradient	MATGRLPDPNTAPVTAKGDLYTYSTVPAKLAVGNNGETLVADSAATTGLR
Ga0129336_102654884	3300010370	Freshwater To Marine Saline Gradient	MATGRVPTTANSPLTTKGDLFGYSTTQARVAVGSD
Ga0133913_132924813	3300010885	Freshwater Lake	MATGRIPTTANSPLTAKGDLFTFSTGSAKLAVGNNGESLVADSSA
Ga0136709_10310931	3300011184	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNNGETLVADSSTSTGLRYTAGTV
Ga0157607_11915961	3300012711	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNNGETLVADSSTSTGL
Ga0164293_102385624	3300013004	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVADSSTSTGLRYQGT
Ga0164293_106034573	3300013004	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVADSSTSTGLRYQGTMAGG
Ga0180041_1567193	3300015243	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVPVGNDNEVLVADSSQSTGLK
Ga0181364_10178771	3300017701	Freshwater Lake	MATGRVPTTANSPLTAKGDLFTYSTAPARLAVGNNGESLVADS
Ga0181364_10658673	3300017701	Freshwater Lake	MASGRIPSTANSPITAKGDLFTYSTAPARLAVGNNGESLVAD
Ga0181364_10765341	3300017701	Freshwater Lake	MVSGRIPSTANSPITAKGDLFTYSTAPARLAVGNNGESLVA
Ga0181347_10371875	3300017722	Freshwater Lake	MATGRVPTTANSPLTAKGDLFTYSTAPARLAVGNNGE
Ga0181347_11598433	3300017722	Freshwater Lake	MAAGRIPSTANSPITAKGDLFTYSTAPARLAVGNNGESLVADSAATTGLRYSAT
Ga0181362_10370673	3300017723	Freshwater Lake	MASGRIPSTANSPLTVKGDLFTFSTASAKLAVGANDTALVAA
Ga0181365_10553791	3300017736	Freshwater Lake	MATGRVPTTANSPLTAKGDLFGYSTAPARLAVGNNGESLVADSAATTG
Ga0181356_10489864	3300017761	Freshwater Lake	MATGRVPTTANSPLTAKGDLFTYSTAPARLAVGNNGESLVADSA
Ga0181356_10866793	3300017761	Freshwater Lake	MASGRIPTTANSPLTAKGDLFTYSTAPARLAVGNNGESLVADSAATTGLRYSAT
Ga0181358_11078571	3300017774	Freshwater Lake	MASGRIPTTANSPLTAKGDLFTYSTAPARLAVGNNGES
Ga0181357_11016523	3300017777	Freshwater Lake	MASGRIPSTANSPITAKGDLFTYSTAPARLAVGNNGESLVADSAATTGLRYSAT
Ga0181357_11362471	3300017777	Freshwater Lake	MASGRIPSTANSPITAKGDLFTYSTAPARLAVGNNGESLVADSSASTGLRYQG
Ga0181357_11506631	3300017777	Freshwater Lake	MASGRIPTTANSPITAKGDLFTYSTAPARLAVGNNGESLVADSSTSTG
Ga0181349_10648044	3300017778	Freshwater Lake	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVADSAATTGLRYQGNQAAGKN
Ga0181349_11126701	3300017778	Freshwater Lake	MASGRIPSTANSPITAKGDLFTYSTAPARLAVGNNGES
Ga0181346_11036851	3300017780	Freshwater Lake	MASGRIPSTANSPITAKGDLFTYSTAPARLAVGNNGESLVADS
Ga0181348_11575023	3300017784	Freshwater Lake	MATGRVPTTANSPLTAKGDLFTYSTAPARLAVGNNGESLVA
Ga0181355_11180601	3300017785	Freshwater Lake	MASGRIPSTANSPITAKGDLFTYSTAPARLAVGNDGESL
Ga0181355_12996821	3300017785	Freshwater Lake	MAAGRIPSTANSPITAKGDLFTYSTAPARLAVGNNGES
Ga0181359_11013031	3300019784	Freshwater Lake	MASGRIPSTANSPITAKGDLFTYSTAPARLAVGNNGESLVADSAATTGL
Ga0181353_11218231	3300022179	Freshwater Lake	MATGRVPTTANSPLTAKGDLFGYSTAPARLAVGNDGETL
Ga0181354_10525434	3300022190	Freshwater Lake	MATGRVPTTANSPLTAKGDLFTYSTAPARLAVGNN
Ga0181354_11571711	3300022190	Freshwater Lake	MASGRIPSTANSPITAKGDLFTYSTAPARLAVGNNGESLVAA
Ga0181354_12112781	3300022190	Freshwater Lake	MASGRIPSTANSPITAKGDLFTYSTAPARLAVGNNVETLVADSSTSTGL
Ga0181351_10690654	3300022407	Freshwater Lake	MASGRIPSTANSPLTVKGDLFTFSTASAKLAVGANDTALV
Ga0181351_11182693	3300022407	Freshwater Lake	MASGRIPTTANSPLTAKGDLFTYSTAPARLAVGNNGESLVADSSTSTGLR
Ga0214917_100145991	3300022752	Freshwater	MATGRIPDANTAPLTAKGDLYTYSTANARLAVGSNGDTLVADSA
Ga0214917_101606701	3300022752	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVADSS
Ga0214917_101825013	3300022752	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVADSSA
Ga0214917_101875653	3300022752	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDG
Ga0214921_102420421	3300023174	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTAPARLAVGNDGEQIVADSSTSTGLRY
Ga0214921_102465123	3300023174	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVADSSATT
Ga0214921_102484223	3300023174	Freshwater	MATGRVPTTANSPLTTKGDLFSYSTAPARLAVGNDGEQIVADSS
Ga0214921_102751583	3300023174	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVADSSTSTGLRYQGNFA
Ga0214921_102967913	3300023174	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVADSST
Ga0214923_102746353	3300023179	Freshwater	MATGRVPTTANSPLTAKGDLFTYSTAPARLAVGNDGEQIVADSSATTGLRYSATP
Ga0255150_10496701	3300024505	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGSDGDTLVADSAATTGL
Ga0255276_10251831	3300024570	Freshwater	MATGRLPDPNSSPLTAKGDLYTYSTVPAKLAVGNNGETLVADSSATTGL
Ga0255156_10171164	3300026478	Freshwater	MATGRLPDPNSSPLTAKGDLYTYSTVPAKLAVGNNGETLVADSSATT
Ga0255154_10247041	3300027467	Freshwater	MATGRLPDPNSSPLTAKGDLYTYSTVPAKLAVGSNGDTLVADSAAS
Ga0255079_10563231	3300027601	Freshwater	MATGRVPTTANSPLTAKGDLFTYSTAPARLAVGNDGESLVADSAATTGLRYTAGNP
Ga0209246_100572694	3300027785	Freshwater Lake	MATGRIPTTANSPLTAKGDLFTFSTGSAKLAVGSNGDTLV
Ga0209246_101567553	3300027785	Freshwater Lake	MASGRIPSTANSPITAKGDLFTYSTAPARLAVGNN
Ga0209353_101640631	3300027798	Freshwater Lake	MASGRIPTTANSPLTAKGDLFTYSTAPARLAVGNNG
Ga0209353_101688823	3300027798	Freshwater Lake	MASGRIPSTANSPITAKGDLFTYSTAPARLAVGNNGESLVADSAATTGLRYSATPSASNP
Ga0209354_101243681	3300027808	Freshwater Lake	MASGRIPSTANSPLTAKGDLFTYSTASARLAVGNNGE
Ga0209354_102638513	3300027808	Freshwater Lake	MASGRIPSTANSPITAKGDLFTYSTAPARLAVGNNGETLVAD
Ga0209298_103831903	3300027973	Freshwater Lake	MATGRVPTTANSPLTAKGDLFTYSTAPARLAVGNNGESLVADSSTSTGLRY
Ga0247723_10898313	3300028025	Deep Subsurface Sediment	MATGRVPTTANSPLTAKGDLFGYSTAPARLAVGNDGEQIV
(restricted) Ga0247844_10510401	3300028571	Freshwater	MATGRVPTTANSPLTAKGDLFTYSTAPARLAVGNDGETIVADSSTSTGLRYQANFAA
Ga0119933_10456453	3300029932	Drinking Water Treatment Plant	VATGRVPTTANSPLTAKGDLFGYSTTQARVPVGNN
Ga0119945_10269513	3300029933	Aquatic	VATGRVPTTANSPLTAKGDLFGYSTTQARVPVGNNGETLVADSSATTGLR
Ga0315907_108112741	3300031758	Freshwater	LATGRVPTTANSPLTAKGDLFGYSTTQARVAVGSDGDTLVADSAAS
Ga0315900_103896141	3300031787	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTAPARLAVGNNGESLVADSSTS
Ga0315909_102188281	3300031857	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGSDGDTLVADSAASTGLRYTS
Ga0315909_103398054	3300031857	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNNGETLVADSSAT
Ga0315909_105280093	3300031857	Freshwater	LATGRVPTTANSPLTAKGDLFGYSTTQARVAVGSDGDTLVADSAASTGLRYTS
Ga0315274_117970091	3300031999	Sediment	MATGRVPTTANSPLTAKGDLFGYSTAPARLAVGNDGEQIVADSA
Ga0315903_101378655	3300032116	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGSDGDTLV
Ga0315903_103136181	3300032116	Freshwater	MATGRVPTTANSPLTAKGDLFTYSTTQARLAVGNDGE
Ga0334982_0191770_2_157	3300033981	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVADSSTSTGLRYT
Ga0334979_0073433_2011_2169	3300033996	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVADSSTSTGLRYQG
Ga0334979_0243960_2_169	3300033996	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNNGETLVADSSTSTGLRYAGNYA
Ga0334986_0216672_951_1058	3300034012	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNNG
Ga0334986_0351895_602_763	3300034012	Freshwater	MATGRIPTTANSPLTVKGDLFGYSTTQARVPVGNDGETLVADSSTSTGLSYQAN
Ga0334986_0398749_557_700	3300034012	Freshwater	MATGRVPTTANSPLTAKGDLFTYSTAPARLAVGNNGEQIVADSSTSTG
Ga0335002_0221515_1041_1157	3300034020	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNNGETL
Ga0334987_0290517_2_121	3300034061	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLV
Ga0334987_0348993_2_121	3300034061	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNNGETLV
Ga0334987_0377010_2_133	3300034061	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTAPARLAVGNDGEQIVADSS
Ga0334995_0278266_946_1107	3300034062	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTAPARLAVGNDGEQIVADSSTSTGLRYQGS
Ga0334995_0315846_1_168	3300034062	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNNGETLVADSSTSTGLRYQGNYA
Ga0334995_0327961_880_990	3300034062	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTAPARLAVGNDGE
Ga0335019_0029385_3_146	3300034066	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNNGETLVADSSTSTG
Ga0335027_0106104_1953_2132	3300034101	Freshwater	MATGRIPTTANSPLTAKGDLFTFSTGSAKLAVGADGDTLVADSSTSTGLRYTTLFGANKN
Ga0335031_0731544_2_163	3300034104	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNNGETLVADSSTSTGLRYQAP
Ga0335035_0230009_974_1126	3300034105	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTAPARLAVGNNGESLVADSSTSTGLRY
Ga0335036_0154203_1491_1631	3300034106	Freshwater	MATGRVPTTANSPLTAKGDLFTYSTTQARLAVGNNGDTLLADSSATT
Ga0335036_0261185_1_168	3300034106	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNDGETLVADSSTSTGLRYTALFG
Ga0335053_0701234_1_168	3300034118	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNNGETLVADSSAATGLAYIATPS
Ga0335049_0512643_595_759	3300034272	Freshwater	MATGRVPTTANSPLTAKGDLFGYSTTQARVAVGNNGETLVADSSTSTGLRYTAGT