Metagenome Family F102622

Overview

Basic Information

• Family ID: F102622
• Family Type: Metagenome
• Number of Sequences: 101
• Average Sequence Length: 47 residues
• Representative Sequence: MKRRWNAALQSLVLVRMGQELGTDSDLAQAVAHSIDFVLGTLARFLP
• Number of Associated Samples: 55
• Number of Associated Scaffolds: 101

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 95.00 %
• % of genes near scaffold ends (potentially truncated): 9.90 %
• % of genes from short scaffolds (< 2000 bps): 62.38 %
• Associated GOLD sequencing projects: 49
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (74.257 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (33.663 % of family members)
• Environment Ontology (ENVO): Unclassified (81.188 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (78.218 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 54.67%
  β-sheet: 0.00%
  Coil/Unstructured: 45.33%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF03837	RecT	5.94
PF00589	Phage_integrase	5.94
PF02899	Phage_int_SAM_1	4.95
PF13495	Phage_int_SAM_4	4.95
PF01555	N6_N4_Mtase	3.96
PF09250	Prim-Pol	2.97
PF01726	LexA_DNA_bind	1.98
PF04448	DUF551	1.98
PF12728	HTH_17	1.98
PF05866	RusA	1.98
PF05136	Phage_portal_2	0.99
PF07120	DUF1376	0.99
PF00145	DNA_methylase	0.99
PF13518	HTH_28	0.99
PF05135	Phage_connect_1	0.99
PF03354	TerL_ATPase	0.99
PF10124	Mu-like_gpT	0.99
PF11367	DUF3168	0.99
PF11922	DUF3440	0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	5.94
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	4.95
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	4.95
COG0863	DNA modification methylase	Replication, recombination and repair [L]	3.96
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	3.96
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	3.96
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	1.98
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.99
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	0.99
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.99
COG5511	Phage capsid protein	Mobilome: prophages, transposons [X]	0.99

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.26 %
All Organisms	root	All Organisms	25.74 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.26 %
cellular organisms	root	All Organisms → cellular organisms	14.85 %
Viruses	superkingdom	All Organisms → Viruses	10.89 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.85 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	8.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.26 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	8.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.26 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	8.91 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.26 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	8.91 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.99 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.26 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	8.91 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	0.99 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.26 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.91 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	0.99 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.26 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.91 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %
unclassified Marinobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter	0.99 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.26 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.91 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %
Marinobacter sp. Hex_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp. Hex_13	0.99 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002408|B570J29032_108774694	Not Available	507
3300002408|B570J29032_108928502	Not Available	543
3300002835|B570J40625_100038295	Not Available	7228
3300002835|B570J40625_100104762	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3467
3300002835|B570J40625_100461523	Not Available	1208
3300004772|Ga0007791_10003398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5937
3300004804|Ga0007796_10149778	Not Available	700
3300005525|Ga0068877_10001000	All Organisms → cellular organisms → Bacteria	23928
3300005581|Ga0049081_10074402	Not Available	1277
3300005581|Ga0049081_10296287	Not Available	558
3300005805|Ga0079957_1002502	Not Available	16068
3300006030|Ga0075470_10001943	Not Available	6464
3300007177|Ga0102978_1170122	Not Available	1292
3300009068|Ga0114973_10078565	All Organisms → cellular organisms → Bacteria → Proteobacteria	1898
3300009068|Ga0114973_10161842	Not Available	1239
3300009068|Ga0114973_10180110	Not Available	1162
3300009068|Ga0114973_10230246	Not Available	1004
3300009068|Ga0114973_10388493	Not Available	732
3300009068|Ga0114973_10452684	Not Available	668
3300009152|Ga0114980_10000289	All Organisms → cellular organisms → Bacteria	35560
3300009152|Ga0114980_10182195	Not Available	1238
3300009152|Ga0114980_10244444	Not Available	1049
3300009154|Ga0114963_10017138	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4856
3300009154|Ga0114963_10026763	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3817
3300009154|Ga0114963_10144666	Not Available	1416
3300009154|Ga0114963_10233490	All Organisms → cellular organisms → Bacteria	1050
3300009163|Ga0114970_10545487	Not Available	628
3300009163|Ga0114970_10580922	Not Available	604
3300009183|Ga0114974_10099719	Not Available	1871
3300009183|Ga0114974_10317968	Not Available	911
3300009184|Ga0114976_10127417	Not Available	1438
3300010354|Ga0129333_10209849	Not Available	1768
3300010354|Ga0129333_10614575	Not Available	942
3300010370|Ga0129336_10263622	Not Available	965
3300010370|Ga0129336_10455635	Not Available	693
3300010885|Ga0133913_10637980	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2793
3300011995|Ga0153800_1012843	Not Available	832
3300012000|Ga0119951_1021053	Not Available	2329
3300012000|Ga0119951_1077904	Not Available	846
3300012012|Ga0153799_1014098	Not Available	1694
3300013372|Ga0177922_10568224	Not Available	942
3300013372|Ga0177922_10918262	Not Available	693
3300017766|Ga0181343_1188910	Not Available	566
3300020048|Ga0207193_1038159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp. Hex_13	5327
3300020167|Ga0194035_1169298	Not Available	679
3300020494|Ga0208326_100033	Not Available	7293
3300020516|Ga0207935_1000311	Not Available	12131
3300020516|Ga0207935_1010778	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1379
3300020536|Ga0207939_1006920	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1945
3300020544|Ga0207937_1029015	Not Available	856
3300020552|Ga0207940_1000437	Not Available	14096
3300021349|Ga0194052_1041111	Not Available	1857
3300022752|Ga0214917_10001207	Not Available	33600
3300022752|Ga0214917_10035297	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3654
3300022752|Ga0214917_10064832	Not Available	2345
3300022752|Ga0214917_10076121	Not Available	2078
3300022752|Ga0214917_10436528	Not Available	527
3300023174|Ga0214921_10027241	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5758
3300023179|Ga0214923_10010957	Not Available	9134
3300023179|Ga0214923_10016368	All Organisms → cellular organisms → Bacteria	6956
3300023179|Ga0214923_10053875	Not Available	3038
3300023179|Ga0214923_10146208	Not Available	1487
3300023179|Ga0214923_10146361	Not Available	1486
3300023179|Ga0214923_10147508	Not Available	1478
3300023179|Ga0214923_10172081	Not Available	1317
3300023179|Ga0214923_10215961	All Organisms → Viruses → Predicted Viral	1114
3300023179|Ga0214923_10217574	Not Available	1108
3300023179|Ga0214923_10335327	Not Available	804
3300025578|Ga0208864_1000847	All Organisms → cellular organisms → Bacteria	10136
3300025585|Ga0208546_1001857	Not Available	6470
3300027659|Ga0208975_1067362	Not Available	1074
3300027708|Ga0209188_1130805	Not Available	969
3300027733|Ga0209297_1000253	Not Available	36108
3300027741|Ga0209085_1009219	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4994
3300027741|Ga0209085_1046843	Not Available	2010
3300027741|Ga0209085_1125920	All Organisms → cellular organisms → Bacteria	1103
3300027741|Ga0209085_1218348	Not Available	765
3300027747|Ga0209189_1005106	Not Available	8376
3300027747|Ga0209189_1173721	Not Available	906
3300027760|Ga0209598_10317166	Not Available	604
3300027793|Ga0209972_10002962	All Organisms → cellular organisms → Bacteria	13536
3300027971|Ga0209401_1042120	All Organisms → cellular organisms → Bacteria → Proteobacteria	2124
3300027971|Ga0209401_1080754	Not Available	1383
3300027971|Ga0209401_1126932	Not Available	1021
3300027973|Ga0209298_10000243	All Organisms → cellular organisms → Bacteria	35433
3300027973|Ga0209298_10182999	Not Available	864
3300027974|Ga0209299_1171904	Not Available	806
3300031758|Ga0315907_10198565	All Organisms → Viruses → Predicted Viral	1682
3300033993|Ga0334994_0002654	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13005
3300033993|Ga0334994_0108105	Not Available	1622
3300033993|Ga0334994_0195237	Not Available	1100
3300034062|Ga0334995_0018993	All Organisms → cellular organisms → Bacteria	6173
3300034062|Ga0334995_0167870	Not Available	1564
3300034063|Ga0335000_0068240	Not Available	2495
3300034096|Ga0335025_0001594	Not Available	17744
3300034096|Ga0335025_0021076	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4522
3300034101|Ga0335027_0224185	Not Available	1317
3300034112|Ga0335066_0558591	Not Available	598
3300034122|Ga0335060_0258827	Not Available	967
3300034122|Ga0335060_0453377	Not Available	669

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	94.06%
Marine	Environmental → Aquatic → Marine	5.94%

Type

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	73.27%
Lentic	Environmental → Aquatic → Freshwater → Lentic	19.80%
Coastal	Environmental → Aquatic → Marine → Coastal	5.94%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.99%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	72.28%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	12.87%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	6.93%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.99%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	33.66%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	28.71%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.93%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	6.93%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.94%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	2.97%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.97%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.98%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.98%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.99%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.99%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.99%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.99%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental
3300004772	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M	Environmental
3300004804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M	Environmental
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental
3300007177	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface and Bottom layers) 16 sequencing projects	Environmental
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental
3300010885	northern Canada Lakes Co-assembly	Environmental
3300011995	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1m	Environmental
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental
3300020167	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L239-20m	Environmental
3300020494	Freshwater microbial communities from Lake Mendota, WI - 25SEP2008 deep hole epilimnion (SPAdes)	Environmental
3300020516	Freshwater microbial communities from Lake Mendota, WI - 30AUG2010 deep hole epilimnion (SPAdes)	Environmental
3300020536	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion (SPAdes)	Environmental
3300020544	Freshwater microbial communities from Lake Mendota, WI - 04SEP2011 deep hole epilimnion (SPAdes)	Environmental
3300020552	Freshwater microbial communities from Lake Mendota, WI - 06JUL2012 deep hole epilimnion (SPAdes)	Environmental
3300021349	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-6m	Environmental
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental
3300025578	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M (SPAdes)	Environmental
3300025585	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)	Environmental
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental
3300034063	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053	Environmental
3300034096	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098	Environmental
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29032_1087746942	3300002408	Freshwater	MNRYWNTALHSLLCVRLGQELGTTSELAQAVAHSIDFVLGSLARFLG*
B570J29032_1089285021	3300002408	Freshwater	MKRHWNAAMKSLLLVRLGQELGTSSDLAQAIAHSIDFVLGTLARFLG*
B570J40625_10003829514	3300002835	Freshwater	MQRQWNAALHSLLCVRLGQELGTASELAQTVAHCIDFLIGTLARLIA*
B570J40625_1001047624	3300002835	Freshwater	MARIWNRLLEQLVLVRLGQELGTDSDLARAVAHSIDFALGTLARFLG*
B570J40625_1004615233	3300002835	Freshwater	MQRRWNAALQSLVLVRLGQELGTDSSLAQTVAHAIDFAVGTLARFLP*
Ga0007791_100033981	3300004772	Freshwater	MTRNWNAALQSLVLIRLGQELGTSSDLAQAIAHSIDALVHALAGALAR*
Ga0007796_101497783	3300004804	Freshwater	MKRNWNAALQSLVLVRLGQELGTSSDLAQAIAHSIDALVHALA
Ga0068877_1000100034	3300005525	Freshwater Lake	MPRTWNAAIHSLLCIRLGQELGTSSELAQTIAHSIDFAVGTLARILG*
Ga0049081_100744022	3300005581	Freshwater Lentic	MKRYWNNALQSLVLVRMGQELGTDSDLAQAVAHSIDFVLGTLARFFS*
Ga0049081_102962871	3300005581	Freshwater Lentic	MKRRWNAALQSLVLIRFGQELGTDSSLAQTVAHAIDFAVGTLARFLP*
Ga0079957_100250216	3300005805	Lake	MKRRWNSALQALVLVRFGQELGTSSDTAQAVAHCIDFVLGTVARLVG*
Ga0075470_100019431	3300006030	Aqueous	MARIWNRLLEQLVLVRLGQELGTDSELAQAIAGGIDFALGTLARFIG*
Ga0102978_11701223	3300007177	Freshwater Lake	MGKRWNAALQSLVLVRLGQELGSDSSLARSVAAAIDCVLDLLRPFF*
Ga0114973_100785653	3300009068	Freshwater Lake	MKRRLDAALQSLVLIRFGQELGTDSDLAQAVASVIDFAIGTISRLLT*
Ga0114973_101618421	3300009068	Freshwater Lake	MRRRLDAALQSLVLIRFGQELGTDSDIAQAVAHGIDFVLGTLARFLG*
Ga0114973_101801101	3300009068	Freshwater Lake	MKRRLDAALQSLVLIRLGQELGTDSDIAQAVAHGIDFVLGTLARFLG*
Ga0114973_102302463	3300009068	Freshwater Lake	MRRRLNAALQSLVLIRLGQELGTDSDIAQAVAHGIDFVLGTLAKFLG*
Ga0114973_103884932	3300009068	Freshwater Lake	MKRRIDAALQSLVLIRFGQELGTDSDLAQAVASAIDFAIGTISRLLT*
Ga0114973_104526841	3300009068	Freshwater Lake	MKRRIDAALQSLVLIRFGQELGTDSDLAQAVASVIDFAIGTISRLLT*
Ga0114980_1000028952	3300009152	Freshwater Lake	MPRTWNAAIHSLLCIRLGQELGTSSELAQTIAHSIDFVLGTLARFLG*
Ga0114980_101821951	3300009152	Freshwater Lake	MKSHWKRCWNTLLHSLVCVRLGQELGTSSELAQAVAGSIDFVLKTLARFLG*
Ga0114980_102444442	3300009152	Freshwater Lake	MTRRWNAALQSLVLVRLGQELGTDSSLAQTVAHAIDFAVGTLARFLP*
Ga0114963_100171384	3300009154	Freshwater Lake	MKTHWKRCWNTLLHSLVCVRLGQELGTSSDLAQAVAHSIDFVLGTLSRFLG*
Ga0114963_100267632	3300009154	Freshwater Lake	MTRTWNAAIHSLVCVRLGQELGTSSDLAQAIAHSIDFVLGILARFCG*
Ga0114963_101446662	3300009154	Freshwater Lake	MTRRWNAALQSLVLVRLGQELGTSSDLAQAIAHSIDALLDSLARFLS*
Ga0114963_102334902	3300009154	Freshwater Lake	MKRRWNAALQSLVLVRLGQELGCDSSLAQTVAHAIDFAVGTLARFLP*
Ga0114970_105454871	3300009163	Freshwater Lake	GHTMKRRWNAALQSLVLVRLGQELGTDSSLAQNVAHGIDFVLGTLARFLS*
Ga0114970_105809221	3300009163	Freshwater Lake	MKRRWNAALQSLVLVRLGQELGADSSLAQNVAHGIDFVLGTLARFLS*
Ga0114974_100997192	3300009183	Freshwater Lake	MARIWNRLLEQLVLVRLGQELGADSDLAQAIAGGIDFALGTLARFIG*
Ga0114974_103179682	3300009183	Freshwater Lake	MKSRWNAALNSLLCVRLGQELGTSSELAQAVAGGIDFVLGTLARFLG*
Ga0114976_101274171	3300009184	Freshwater Lake	MTRRWNAALQSLVLVRLGQELGTDSSLAQAVAHAIDFAVGTLA
Ga0129333_102098492	3300010354	Freshwater To Marine Saline Gradient	MARIWNRLLEQLVLVRLGQELGTDSDLARAIAHCIDFALGTLARFLG*
Ga0129333_106145752	3300010354	Freshwater To Marine Saline Gradient	MTRHWNHAMHSLLLVRLGQELGTSSELAQAIAHGIDALVSAIARFVG*
Ga0129336_102636223	3300010370	Freshwater To Marine Saline Gradient	MQRHWNAALHSLLCVRLGQELGTASELAQTVAHSIDFVIGTVARLFS*
Ga0129336_104556352	3300010370	Freshwater To Marine Saline Gradient	MAREGHVMTRRYNTAIQSLLLVRLGQELGTSSDLAQAIAHGIDALVLAIARFAS*
Ga0133913_106379801	3300010885	Freshwater Lake	MQRRWNAALQSLVLVRLGQELGTDSSLAQTVAHAIDFA
Ga0153800_10128432	3300011995	Freshwater	MNWNAALQSLVLVRLGQDLGHDSKLARAIHNLIDLLVNVATGIF*
Ga0119951_10210535	3300012000	Freshwater	MKHHWKRGWSSLLHSLVCVRLGQELGTSSDLAQAVAHSIDFVLGALARFLG*
Ga0119951_10779042	3300012000	Freshwater	MARTWNAAIHSLVCVRLGQELGTSSDLAQAIAHSIDFVLGVLARFLG*
Ga0153799_10140982	3300012012	Freshwater	MKRHWNNALQSLVLIRFGQELGTDSELAQAVAHSIDFVLSTLSRIFS*
Ga0177922_105682243	3300013372	Freshwater	MKRRWNAALQSLVLVRLGQELGTSSDLAQAIAHSIDALVHALTGALAR*
Ga0177922_109182621	3300013372	Freshwater	MKRHWNATLQSLVLVRFGQELGTDSDLAQAVAHSIDFVLGTLARFLP*
Ga0181343_11889102	3300017766	Freshwater Lake	MKRRWNAALQSLVLVRLGQELGTSSDLAQAIAHSIDALLNSLARFLS
Ga0207193_10381592	3300020048	Freshwater Lake Sediment	MKRQWNAAMKSLLLIRVGQELGTSSELAQTIAHSIDFILGTLARFFS
Ga0194035_11692981	3300020167	Anoxic Zone Freshwater	MKRINWNAALQSLVLIRFGQELGTASDIAQAVAHSIDFVLGTLARFLA
Ga0208326_1000333	3300020494	Freshwater	MKRQWNAAMKSLLLIRVGQELGTSSELAQTIAHSIDFVLGTLARFFS
Ga0207935_100031115	3300020516	Freshwater	MQRQWNAALHSLLCVRLGQELGTASELAQTVAHCIDFLIGTLARLIA
Ga0207935_10107783	3300020516	Freshwater	MARIWNRLLEQLVLVRLGQELGTDSDLARAVAHSIDFALGTLARFLG
Ga0207939_10069203	3300020536	Freshwater	MKRHWNAAMKSLLLVRLGQELGTSSDLAQAIAHSIDFVLGTLARFLG
Ga0207937_10290152	3300020544	Freshwater	MNRYWNTALHSLLCVRLGQELGTTSELAQAVAHSIDFVLGSLARFLG
Ga0207940_100043725	3300020552	Freshwater	MTRRWNAALQSLVLVRLGQELGTSSDLAQAIAHSIDALVHALAGALAR
Ga0194052_10411112	3300021349	Anoxic Zone Freshwater	MKRRWNAALQALVLVRLGQELGTDSELSQAVAHSIDFVLGTLARFLS
Ga0214917_1000120732	3300022752	Freshwater	MKRQWNAAMQSLVLIRMGQELGTDSSLAQTVAHAIDFVIGTLTRFLS
Ga0214917_100352977	3300022752	Freshwater	MKRRINSLIQSLVLIRFGQELGTSSDLAQAVAGSIDFVLGTLARFLG
Ga0214917_100648325	3300022752	Freshwater	MTRNWNAAIHSLVCVRLGQELGTSSDLAQAIAHSIDFVLGVLARFLG
Ga0214917_100761212	3300022752	Freshwater	MKHHWKRGWSSLLHSLVCVRLGQELGTSSDLAQAVAHSIDFVLGALARFLG
Ga0214917_104365282	3300022752	Freshwater	TSFNVTEDTMARTWNAAIHSLVCVRLGQELGTSSDLAQAIAHSIDFALGIIARFCS
Ga0214921_100272413	3300023174	Freshwater	MTRRWNAALQSLVLVRLGQELGCDSSLAQTVAHAIDFAVGTLAKFLP
Ga0214923_100109577	3300023179	Freshwater	MKRFWNSALKSLLLVRLGQELGTSSELAQAVAHGIDFVLGTIARFCS
Ga0214923_100163683	3300023179	Freshwater	MKRFWNSALKSLLLVRLGQELGTSSELAQAVAHGIDFFVGCISRFFP
Ga0214923_100538753	3300023179	Freshwater	MQRYWNAALHSLLCVRLGQELGTSSDLAQAIAHSIDFVLGTLARFIG
Ga0214923_101462083	3300023179	Freshwater	MARTWNAAIHSLVCVRLGQELGTSSELAQGLAGAIDWLLSIAARFCS
Ga0214923_101463616	3300023179	Freshwater	MNRHWNAAIHSLICVRLGQELGTSSDLAQGLAGAIDWVIALAARFAG
Ga0214923_101475083	3300023179	Freshwater	MNRYWNTALHSMLCVRLGQELGTTSELAQAVAHSIDFVLGTLARFLG
Ga0214923_101720811	3300023179	Freshwater	MPRRWNAALQSLVLVRLGQELGTSSELAQGLAGAIDWLLSIAARFCS
Ga0214923_102159613	3300023179	Freshwater	MARTWNAAIHSLVCVRLGQELGTSSDLAQAIAHSIDFALGIIARFCS
Ga0214923_102175744	3300023179	Freshwater	MTRTWNAAIHSLVCVRLGQELGTSSDLAQAIAHSIDFALGIIARFCS
Ga0214923_103353274	3300023179	Freshwater	MNRHWNAAIHSLICVRLGQELGTSSELAQGLAGAIDWLLSIAARFCS
Ga0208864_100084713	3300025578	Freshwater	MTRNWNAALQSLVLIRLGQELGTSSDLAQAIAHSIDALVHALAGALAR
Ga0208546_10018571	3300025585	Aqueous	MARIWNRLLEQLVLVRLGQELGTDSELAQAIAGGIDFALGTLARFIG
Ga0208975_10673622	3300027659	Freshwater Lentic	MKRYWNNALQSLVLVRMGQELGTDSDLAQAVAHSIDFVLGTLARFFS
Ga0209188_11308051	3300027708	Freshwater Lake	MKSHWKRCWNTLLHSLVCVRLGQELGTSSELAQAVAGSIDFVLKTLARFL
Ga0209297_100025329	3300027733	Freshwater Lake	MTRRWNAALQSLVLVRLGQELGTDSSLAQTVAHAIDFAVGTLARFLP
Ga0209085_10092199	3300027741	Freshwater Lake	MKTHWKRCWNTLLHSLVCVRLGQELGTSSDLAQAVAHSIDFVLGTLSRFLG
Ga0209085_10468432	3300027741	Freshwater Lake	MTRTWNAAIHSLVCVRLGQELGTSSDLAQAIAHSIDFVLGILARFCG
Ga0209085_11259202	3300027741	Freshwater Lake	MKRRWNAALQSLVLVRLGQELGCDSSLAQTVAHAIDFAVGTLARFLP
Ga0209085_12183481	3300027741	Freshwater Lake	MKRRLDAALQSLVLIRLGQELGTDSDIAQAVAHGIDFVLGTLARFLG
Ga0209189_10051068	3300027747	Freshwater Lake	MTRRWNAALQSLVLVRLGQELGTSSDLAQAIAHSIDALLDSLARFLS
Ga0209189_11737211	3300027747	Freshwater Lake	MKRRIDAALQSLVLIRFGQELGTDSDLAQAVASAIDFAIGTISRLLT
Ga0209598_103171661	3300027760	Freshwater Lake	MRRRLDAALQSLVLIRFGQELGTDSDIAQAVAHGIDFVLGTLARFLG
Ga0209972_1000296217	3300027793	Freshwater Lake	MPRTWNAAIHSLLCIRLGQELGTSSELAQTIAHSIDFAVGTLARILG
Ga0209401_10421203	3300027971	Freshwater Lake	MKRRLDAALQSLVLIRFGQELGTDSDLAQAVASVIDFAIGTISRLLT
Ga0209401_10807543	3300027971	Freshwater Lake	MRRRLNAALQSLVLIRLGQELGTDSDIAQAVAHGIDFVLGTLAKFLG
Ga0209401_11269322	3300027971	Freshwater Lake	MKRRIDAALQSLVLIRFGQELGTDSDLAQAVASVIDFAIGTISRLLT
Ga0209298_100002431	3300027973	Freshwater Lake	MPRTWNAAIHSLLCIRLGQELGTSSELAQTIAHSIDFVLGTLARFLG
Ga0209298_101829991	3300027973	Freshwater Lake	MKSHWKRCWNTLLHSLVCVRLGQELGTSSELAQAVAGSIDFVLKTL
Ga0209299_11719043	3300027974	Freshwater Lake	MKSHWKRCWNTLLHSLVCVRLGQELGTSSELAQAVAGSIDFVLKTLA
Ga0315907_101985651	3300031758	Freshwater	SFTVTEDTMPRTWNAAIHSLLCIRLGQELGTSSELAQTIAHSIDFAVGTLARILG
Ga0334994_0002654_12402_12545	3300033993	Freshwater	MARIWNRLLEQLVLVRLGQELGTDSDLARAIAHCIDFALGTLARFLG
Ga0334994_0108105_1154_1297	3300033993	Freshwater	MTRYWNTALHSLLCVRLGQELGTTSELAQAVAHSIDFVLGTLARFLG
Ga0334994_0195237_640_783	3300033993	Freshwater	MKRQWNAAMKSLLLIRVGQELGTSSELAQAIAHSIDFVLGTLARFFS
Ga0334995_0018993_636_779	3300034062	Freshwater	MKRQWNAAMQSLVLIRMGQELGTDSSLAQNIAHAIDFVIGTLTRFLS
Ga0334995_0167870_1177_1320	3300034062	Freshwater	MKRQWNAAIKSLLLVRVGQELGTSSELAQTIAHSIDFVLGTLARFLS
Ga0335000_0068240_2_133	3300034063	Freshwater	MHKRWNAALHALLCVRLGQELGTSSELAQTIAHGIDFALGTVAR
Ga0335025_0001594_13141_13284	3300034096	Freshwater	MKRRWNAALQSLVLVRMGQELGTDSDLAQAVAHSIEFVLGTLARFFS
Ga0335025_0021076_2780_2914	3300034096	Freshwater	MNWNAALQSLVLVRLGQDLGHDSKLARAIHNLIDLLVNVATGIF
Ga0335027_0224185_947_1090	3300034101	Freshwater	MQRRWNAAMQSLVLVRLGQELGTDSSLAQTVAHAIDFAVGTLARFLP
Ga0335066_0558591_290_433	3300034112	Freshwater	MTRYWNTALHSLLCVRLGQELGTTSELAQAVAHSIDFVLGSLARFLG
Ga0335060_0258827_752_895	3300034122	Freshwater	MKRHWNNALQSLVLIRFGQELGTDSDLAQAVAHSIDFVLGTLARIFS
Ga0335060_0453377_31_174	3300034122	Freshwater	MKRRWNAALQSLVLVRMGQELGTDSDLAQAVAHSIDFVLGTLARFLP
Ga0335013_0220946_93_245	3300034284	Freshwater	MAHMKRRINSLIQSLVLVRFGQELGTDSQAAQAVAHAIDFVVSTLARFLG