Metagenome / Metatranscriptome Family F102610

Basic Information
Family ID	F102610
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	59 residues
Representative Sequence	MFFSRSFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLKGPKTQKALILNLGPK
Number of Associated Samples	64
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.06 %
% of genes near scaffold ends (potentially truncated)	38.61 %
% of genes from short scaffolds (< 2000 bps)	89.11 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Unclassified (76.238 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere (17.822 % of family members)
Environment Ontology (ENVO)	Unclassified (47.525 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.574 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.82% β-sheet: 31.82% Coil/Unstructured: 61.36%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00006	ATP-synt_ab	45.54
PF00306	ATP-synt_ab_C	34.65
PF00115	COX1	1.98
PF00510	COX3	1.98

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0055	FoF1-type ATP synthase, beta subunit	Energy production and conversion [C]	34.65
COG0056	FoF1-type ATP synthase, alpha subunit	Energy production and conversion [C]	34.65
COG1155	Archaeal/vacuolar-type H+-ATPase catalytic subunit A/Vma1	Energy production and conversion [C]	34.65
COG1156	Archaeal/vacuolar-type H+-ATPase subunit B/Vma2	Energy production and conversion [C]	34.65
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	1.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
All Organisms	root	All Organisms	23.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
cellular organisms	root	All Organisms → cellular organisms	23.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.83 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	6.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.90 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3.96 %
Amoebozoa	clade	All Organisms → cellular organisms → Eukaryota → Amoebozoa	0.99 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.94 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	3.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.96 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %
Tubulinea	phylum	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea	0.99 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	3.96 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	3.96 %
Elardia	class	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia	0.99 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.99 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.99 %
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Thiotrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae	3.96 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	3.96 %
Arcellinida	order	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida	0.99 %
PS1 clade	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade	0.99 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Thiomargarita	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita	3.96 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	3.96 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Candidatus Micropelagos	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos	0.99 %
Sphaerothecina	suborder	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	3.96 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	3.96 %
Arcellidae	family	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae	0.99 %
Candidatus Micropelagos thuwalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	0.99 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	3.96 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	3.96 %
Arcella	genus	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella	0.99 %
Candidatus Micropelagos thuwalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	0.99 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	3.96 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	3.96 %
Arcella intermedia	species	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	0.99 %
Candidatus Micropelagos thuwalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	0.99 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	3.96 %
Chelicerata	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata	0.99 %
Arcella intermedia	species	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	0.99 %
Candidatus Micropelagos thuwalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	0.99 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	3.96 %
Arachnida	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida	0.99 %
Arcella intermedia	species	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	0.99 %
Candidatus Micropelagos thuwalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	0.99 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	3.96 %
Acari	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari	0.99 %
Arcella intermedia	species	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	0.99 %
Candidatus Micropelagos thuwalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	0.99 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	3.96 %
Parasitiformes	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Parasitiformes	0.99 %
Arcella intermedia	species	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	0.99 %
Candidatus Micropelagos thuwalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	0.99 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	3.96 %
Ixodida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Parasitiformes → Ixodida	0.99 %
Arcella intermedia	species	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	0.99 %
Candidatus Micropelagos thuwalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	0.99 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	3.96 %
Ixodoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Parasitiformes → Ixodida → Ixodoidea	0.99 %
Arcella intermedia	species	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	0.99 %
Candidatus Micropelagos thuwalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	0.99 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	3.96 %
Ixodidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Parasitiformes → Ixodida → Ixodoidea → Ixodidae	0.99 %
Arcella intermedia	species	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	0.99 %
Candidatus Micropelagos thuwalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	0.99 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	3.96 %
Ixodinae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Parasitiformes → Ixodida → Ixodoidea → Ixodidae → Ixodinae	0.99 %
Arcella intermedia	species	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	0.99 %
Candidatus Micropelagos thuwalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	0.99 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	3.96 %
Ixodes	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Parasitiformes → Ixodida → Ixodoidea → Ixodidae → Ixodinae → Ixodes	0.99 %
Arcella intermedia	species	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	0.99 %
Candidatus Micropelagos thuwalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	0.99 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.24 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	3.96 %
Ixodes ricinus	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Parasitiformes → Ixodida → Ixodoidea → Ixodidae → Ixodinae → Ixodes → Ixodes ricinus	0.99 %
Arcella intermedia	species	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	0.99 %
Candidatus Micropelagos thuwalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	0.99 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.99 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003163\|Ga0006759J45824_1040979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	1221	Open in IMG/M
3300003308\|Ga0006777J48905_1008854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1563	Open in IMG/M
3300003840\|Ga0032355_1072890	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300004798\|Ga0058859_11442438	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300004798\|Ga0058859_11796264	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300004801\|Ga0058860_12055675	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300004803\|Ga0058862_10157686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1439	Open in IMG/M
3300005171\|Ga0066677_10493435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → PS1 clade → Candidatus Micropelagos → Candidatus Micropelagos thuwalensis	703	Open in IMG/M
3300005330\|Ga0070690_100171336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1494	Open in IMG/M
3300005455\|Ga0070663_100576795	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300005719\|Ga0068861_100619877	Not Available	995	Open in IMG/M
3300007233\|Ga0075178_1840342	Not Available	536	Open in IMG/M
3300007235\|Ga0075184_11100403	Not Available	1400	Open in IMG/M
3300007240\|Ga0075176_1915251	Not Available	936	Open in IMG/M
3300007241\|Ga0075170_1557055	Not Available	670	Open in IMG/M
3300009095\|Ga0079224_101807118	Not Available	867	Open in IMG/M
3300009112\|Ga0115923_10586586	Not Available	7019	Open in IMG/M
3300009354\|Ga0115925_10545469	Not Available	1856	Open in IMG/M
3300009500\|Ga0116229_10095579	Not Available	2694	Open in IMG/M
3300009500\|Ga0116229_10100740	Not Available	2608	Open in IMG/M
3300009500\|Ga0116229_10810261	Not Available	759	Open in IMG/M
3300009697\|Ga0116231_10012701	Not Available	12231	Open in IMG/M
3300010038\|Ga0126315_10111791	Not Available	1580	Open in IMG/M
3300010133\|Ga0127459_1033673	Not Available	1507	Open in IMG/M
3300010146\|Ga0126320_1489840	Not Available	542	Open in IMG/M
3300010192\|Ga0127506_1021871	Not Available	2348	Open in IMG/M
3300010396\|Ga0134126_12541239	Not Available	557	Open in IMG/M
3300010399\|Ga0134127_11857093	Not Available	679	Open in IMG/M
3300010400\|Ga0134122_10562355	Not Available	1045	Open in IMG/M
3300010400\|Ga0134122_11113717	Not Available	783	Open in IMG/M
3300010401\|Ga0134121_10117836	Not Available	2240	Open in IMG/M
3300010401\|Ga0134121_12279024	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	580	Open in IMG/M
3300011120\|Ga0150983_10738182	Not Available	635	Open in IMG/M
3300011332\|Ga0126317_10114686	Not Available	521	Open in IMG/M
3300011332\|Ga0126317_10472117	Not Available	916	Open in IMG/M
3300011333\|Ga0127502_10687430	Not Available	610	Open in IMG/M
3300011400\|Ga0137312_1081281	Not Available	564	Open in IMG/M
3300012212\|Ga0150985_100534448	Not Available	1501	Open in IMG/M
3300012212\|Ga0150985_101911477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4497	Open in IMG/M
3300012212\|Ga0150985_101967243	Not Available	1056	Open in IMG/M
3300012212\|Ga0150985_106629303	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	1512	Open in IMG/M
3300012212\|Ga0150985_106921796	Not Available	665	Open in IMG/M
3300012212\|Ga0150985_107275716	Not Available	655	Open in IMG/M
3300012212\|Ga0150985_108517776	Not Available	1804	Open in IMG/M
3300012212\|Ga0150985_109673789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	1053	Open in IMG/M
3300012212\|Ga0150985_110704605	Not Available	632	Open in IMG/M
3300012212\|Ga0150985_115454188	Not Available	703	Open in IMG/M
3300012212\|Ga0150985_115745510	Not Available	1790	Open in IMG/M
3300012212\|Ga0150985_116368895	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1465	Open in IMG/M
3300012212\|Ga0150985_116866632	Not Available	1333	Open in IMG/M
3300012212\|Ga0150985_116902672	Not Available	1513	Open in IMG/M
3300012212\|Ga0150985_117746737	Not Available	673	Open in IMG/M
3300012212\|Ga0150985_122525193	Not Available	746	Open in IMG/M
3300012212\|Ga0150985_123023794	Not Available	1526	Open in IMG/M
3300012371\|Ga0134022_1023239	Not Available	958	Open in IMG/M
3300012380\|Ga0134047_1228760	Not Available	984	Open in IMG/M
3300012402\|Ga0134059_1001350	Not Available	501	Open in IMG/M
3300012469\|Ga0150984_100122682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1455	Open in IMG/M
3300012469\|Ga0150984_100157100	Not Available	1784	Open in IMG/M
3300012469\|Ga0150984_102298686	Not Available	505	Open in IMG/M
3300012469\|Ga0150984_105567895	Not Available	1628	Open in IMG/M
3300012469\|Ga0150984_105888188	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300012469\|Ga0150984_108864374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3860	Open in IMG/M
3300012469\|Ga0150984_113558261	Not Available	1037	Open in IMG/M
3300012469\|Ga0150984_117762341	Not Available	559	Open in IMG/M
3300012469\|Ga0150984_120252238	Not Available	717	Open in IMG/M
3300012469\|Ga0150984_121241847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	1187	Open in IMG/M
3300012925\|Ga0137419_11904209	Not Available	510	Open in IMG/M
3300014326\|Ga0157380_10809735	Not Available	954	Open in IMG/M
3300016728\|Ga0181500_1467271	Not Available	1835	Open in IMG/M
3300019240\|Ga0181510_1221957	Not Available	1624	Open in IMG/M
3300019260\|Ga0181506_1168584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	1538	Open in IMG/M
3300019268\|Ga0181514_1525161	Not Available	1587	Open in IMG/M
3300019362\|Ga0173479_10370283	Not Available	680	Open in IMG/M
3300020076\|Ga0206355_1135154	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Parasitiformes → Ixodida → Ixodoidea → Ixodidae → Ixodinae → Ixodes → Ixodes ricinus	1514	Open in IMG/M
3300021860\|Ga0213851_1798901	Not Available	1291	Open in IMG/M
3300022721\|Ga0242666_1021273	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	1219	Open in IMG/M
3300025986\|Ga0207658_10213503	All Organisms → cellular organisms → Eukaryota	1619	Open in IMG/M
3300030779\|Ga0075378_10020183	Not Available	612	Open in IMG/M
3300030790\|Ga0138304_1243624	Not Available	587	Open in IMG/M
3300030990\|Ga0308178_1031703	Not Available	905	Open in IMG/M
3300031057\|Ga0170834_100196733	Not Available	1006	Open in IMG/M
3300031057\|Ga0170834_111224259	Not Available	944	Open in IMG/M
3300031231\|Ga0170824_105499540	Not Available	711	Open in IMG/M
3300031731\|Ga0307405_11404517	Not Available	610	Open in IMG/M
3300031809\|Ga0316048_109038	Not Available	527	Open in IMG/M
3300032515\|Ga0348332_10986239	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	955	Open in IMG/M
3300034479\|Ga0314785_001272	Not Available	1337	Open in IMG/M
3300034652\|Ga0316598_232484	Not Available	524	Open in IMG/M
3300034659\|Ga0314780_007477	Not Available	1556	Open in IMG/M
3300034659\|Ga0314780_007751	Not Available	1539	Open in IMG/M
3300034659\|Ga0314780_145554	Not Available	580	Open in IMG/M
3300034660\|Ga0314781_007970	Not Available	1415	Open in IMG/M
3300034661\|Ga0314782_012874	Not Available	1311	Open in IMG/M
3300034661\|Ga0314782_063877	Not Available	764	Open in IMG/M
3300034661\|Ga0314782_131928	Not Available	596	Open in IMG/M
3300034662\|Ga0314783_099590	Not Available	618	Open in IMG/M
3300034664\|Ga0314786_011100	Not Available	1299	Open in IMG/M
3300034667\|Ga0314792_258747	Not Available	511	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	48.51%
Host-Associated	Host-Associated	45.54%
Engineered	Engineered	5.94%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	41.58%
Terrestrial	Environmental → Terrestrial	38.61%
Aquatic	Environmental → Aquatic	9.90%
Human	Host-Associated → Human	3.96%
Wastewater	Engineered → Wastewater	3.96%
Built Environment	Engineered → Built Environment	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	37.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.82%
Freshwater	Environmental → Aquatic → Freshwater	8.91%
Peat Moss	Host-Associated → Plants → Peat Moss	4.95%
Digestive System	Host-Associated → Human → Digestive System	3.96%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	3.96%
Unclassified	Engineered → Built Environment → Unclassified	1.98%
Sediment	Environmental → Aquatic → Sediment	0.99%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	17.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.84%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	4.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.96%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	3.96%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	3.96%
Loam	Environmental → Terrestrial → Soil → Loam	2.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.98%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	17.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.94%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	4.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.96%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	3.96%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	3.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.98%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.99%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	17.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	13.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.94%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	4.95%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.96%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	3.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.96%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	3.96%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.97%
Swimming Pool Sandfilter Backwash	Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Swimming Pool Sandfilter Backwash	1.98%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.99%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.99%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.99%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003162	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003163	Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003308	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003840	Avena fatua rhizosphere microbial communities from Hopland, California, USA - H2_Bulk_Litter_50 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300007233	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 B RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007235	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 D RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007240	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 8/11/14 B green RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007241	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009112	Microbial communities from sand-filter backwash in Singapore swimming pools - KB-2	Engineered	Open in IMG/M
3300009354	Microbial communities from sand-filter backwash in Singapore swimming pools - PR-2	Engineered	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009697	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010192	Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fc - Sphagnum fallax MT (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300030779	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030790	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_OS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031809	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300034479	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034652	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_02R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102610

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0006778J45830_10301621	3300003162	Avena Fatua Rhizosphere	NNQKKENLKSLNQKIKNNKNFFSRKFFKDLGIVESVGDGIINILGLQKAANGEMVEICTTEKNQKGLILNLGPK*
Ga0006759J45824_10409791	3300003163	Avena Fatua Rhizosphere	AYLIKMFFSRKFFNNIGIVESVGDGIVNILGLQNVANGEMVEICILTNLQGVQTQKALVLNLGPR*
Ga0006777J48905_10088541	3300003308	Avena Fatua Rhizosphere	MFFSRKFFNNIGIVESVGDGIVNILGLQNVANGEMVEICILTNLQGVQTQKALVLNLGPR
Ga0032355_10728901	3300003840	Avena Fatua Rhizosphere	MYGFLSIQRLFFSRTFFNNIGVVESSGDGIVNILGLQNAANGEMVDIIIGYTSEGASLAKALILNLGPK*
Ga0058859_114424382	3300004798	Host-Associated	FFKNIGIVESVGDGIVNILGLQNVANGEMVEVYISTTLKGPKTQKALILNLGPK*
Ga0058859_117962642	3300004798	Host-Associated	MFFSRNFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLKGPKTQKALILNLGPK
Ga0058860_120556752	3300004801	Host-Associated	FFSRLFLKNIGIIESVGDGIINILGLQNVANGEMVEISTATNESTQKALVLNLGPK*
Ga0058862_101576862	3300004803	Host-Associated	MSNTVNYLIKMFFSRKFFNNIGIVESVGDGIVNILGLQNVANGEMVEICILTNLQGVQTQKALVLNLGPR*
Ga0066677_104934351	3300005171	Soil	MLIVNKKRIDCLSTVDYLIKMFFSRKFFNNIGIVESVGDGIVNILGLQNVANGEMVEICILTNLQGVQTQKALVLNLGPR*
Ga0070690_1001713362	3300005330	Switchgrass Rhizosphere	MFFSRSFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLKGPTTQKALILNLGPK
Ga0070663_1005767951	3300005455	Corn Rhizosphere	RKFFNNIGIVESVGDGIVNILGLQNVANGEMVEICILTNLQGVQTQKALVLNLGPR*
Ga0068861_1006198771	3300005719	Switchgrass Rhizosphere	MFFSRAFFKNIGVVESSGDGIVNILGLQNAANGEMVDIIIGHTSEGPKIAKALVLNLGPK
Ga0075178_18403421	3300007233	Wastewater Effluent	MFFSRGLFKDIGIVDSVGDGIVNILGLQNATNGEMVEICTSSVNSSIKNQKALVLNLGPR
Ga0075184_111004031	3300007235	Wastewater Effluent	MFFSRPFFNNIGIVESVGDGIVNILGLQNVVNGEMVEICISTNLQGTNTQKALVLNLGPK
Ga0075176_19152512	3300007240	Wastewater Effluent	MFIIKMFFSRPFLNNIGIVESVGDGIVNILGLQNVANGEMVEICISTNLQGVNTQKALVLNLGPK*
Ga0075170_15570551	3300007241	Wastewater Effluent	MLCLLLKCFFSRPFLNNIGIVESVGDGIVNILGLQNVANGEMVEICISTNLQGVNTQKALVLNLGPK*
Ga0079224_1018071182	3300009095	Agricultural Soil	MFFSRPFFNNIGVVESVGDGIVNILGLQNVANGEMVEICLFTNLQGAQTQKALVLNLGPK
Ga0115923_105865862	3300009112	Swimming Pool Sandfilter Backwash	MFFSRPFFNNIGIVESVGDGIVNILGLQNVANGEMVEICISTDLQGANTQKALVLNLGPK
Ga0115925_105454692	3300009354	Swimming Pool Sandfilter Backwash	MFFSRPFFNNIGVVESVGDGIVNILGLQNVANGEMVEISLFTNLQGPQTQKALVLNLGPK
Ga0116229_100955793	3300009500	Host-Associated	MKIKKKFFSSSFLNKIGVVESVSDGIINILGLKNVVNGEMVEICMSTTLKGRKTQKALVLNLGSK*
Ga0116229_101007403	3300009500	Host-Associated	MFFSRAFFNKIGVVESVSDGIVNILGLKNAVNGEMVEICMVTTLKGKKTQKALVLNLGSK
Ga0116229_108102612	3300009500	Host-Associated	MKKFFSRDFFNKIGVVESVSDGIVNILGLKKAVNGEMVEICMVTTLKGRKTQKALVLNLGSK*
Ga0116231_100127011	3300009697	Host-Associated	KFFSSSFLNKIGVVESVSDGIINILGLKNVVNGEMVEICMSTTLKGRKTQKALVLNLGSK
Ga0126315_101117912	3300010038	Serpentine Soil	FSRKFFKDLGIVESVGDGIINILGLQKAANGEMVEICTSEATQKGLILNLGPK*
Ga0127459_10336732	3300010133	Grasslands Soil	FSRNFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLKGPKTQKALILNLGPK*
Ga0126320_14898402	3300010146	Soil	MFSKIFKNIGIIESVGDGIINILGLQNASNGEMVEILFAYLRDNQLRTQKALILNLGPK*
Ga0127506_10218713	3300010192	Host-Associated	MKIKKKFFSSSFLNKIGVVESVSDGIIHILGLKNVVNGEMVEICMSTTLKGRKTQKALVLNLGSK*
Ga0134126_125412391	3300010396	Terrestrial Soil	MFFSRNFFNNIGIVESVGDGIVNILGLQNVANGEMVEICILTNLQGIQTQKALVLNLGPKKVSAVCL
Ga0134127_118570932	3300010399	Terrestrial Soil	LFLLSMFSKIFKNIGIIESVGDGIINILGLQNASNGEMVEILFAYLRDNKFSTQKALILNLGPK*
Ga0134122_105623551	3300010400	Terrestrial Soil	NIGIVESIGDGIVNILGLQNAANGEMVDILLNTSNSKVKSYKALILNLGPK*
Ga0134122_111137172	3300010400	Terrestrial Soil	MFSKIFKNIGIIESVGDGIINILGLQNASNGEMVEILFAYLRDNKFSTQKALILNLGPK*
Ga0134121_101178362	3300010401	Terrestrial Soil	MFFSRGFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYISTTLKGPKAQKALILNLGPK
Ga0134121_122790241	3300010401	Terrestrial Soil	SRKFFKDLGIVESVGDGIINILGLQKAANGEMVEICASEQNQKGLILNLGPK*
Ga0150983_107381822	3300011120	Forest Soil	LFFSRAFFKNIGIVESVGDGIINILGLQNAANGEMVEISVSSLSSKIKSQKALILNLGPK
Ga0126317_101146861	3300011332	Soil	RKFFKDLGIVESVGDGIINILGLQKAANGEMVEICTSEENQKGLILNLGPK*
Ga0126317_104721172	3300011332	Soil	LFFSRTFFNNIGVVESSGDGIVNILGLQNAANGEMVDIIIGYTSEGAKIAKALILNLGPK
Ga0127502_106874301	3300011333	Soil	FIFFSFYIKLFMYSKIFKNIGIIESVGDGIINILGLQEASNGEMVEILLSLNDNNKEQKALILNLGPK*
Ga0137312_10812811	3300011400	Soil	MYFFNFKNIGIVESVGDGIINILGLQDASNGEMVEILFAYLPDSEVSTQKALILNL
Ga0150985_1005344482	3300012212	Avena Fatua Rhizosphere	MFFSRAFFKNIGVVESSGDGIVNILGLQNAANGEMVDIIIGHTSEGAKVAKALVLNLGPK
Ga0150985_1019114772	3300012212	Avena Fatua Rhizosphere	LFFSRTFFNNIGVVESSGDGIVNILGLQNAANGEMVDIIIGYTSEGAQIAKALILNLGPK
Ga0150985_1019672431	3300012212	Avena Fatua Rhizosphere	MFFGRNFFNNIGIVESVGDGIINILGLQNAVNGEMVEICISTDIKGRKTVKALVLNLGPR
Ga0150985_1066293031	3300012212	Avena Fatua Rhizosphere	MFFSRSFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLKGPITQKALILNLGPK
Ga0150985_1069217961	3300012212	Avena Fatua Rhizosphere	MFFSRHFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYISTTLRGPKTQKALILNLGPK
Ga0150985_1072757162	3300012212	Avena Fatua Rhizosphere	FFSRKFFKDLGIVESVGDGIINILGLQKAANGEMVEICASEQNQKGLILNLGPK*
Ga0150985_1085177763	3300012212	Avena Fatua Rhizosphere	MFFSRHFFKNIGIVESVGDGIVNILGLQNVANGEMVEVYISTTLKGPKVQKALILNLGPK
Ga0150985_1096737891	3300012212	Avena Fatua Rhizosphere	GIVESVGDGIVNILGLQNVANGEMVEICILTNLQGVQTQKALVLNLGPR*
Ga0150985_1107046052	3300012212	Avena Fatua Rhizosphere	FFKDLGIVESVGDGIINILGLQKAANGEMVEICASEQNQKGLILNLGPK*
Ga0150985_1154541881	3300012212	Avena Fatua Rhizosphere	MFFSRNFFKNIGIVESVGDGIINILGLQKAANGEMVEICASEFNQKGLILNLGPK*
Ga0150985_1157455102	3300012212	Avena Fatua Rhizosphere	MFFGRNFFNNIGIVESVGDGIINILGLQNAVNGEMVEICISTDIKGIKIVKALVLNLGPR
Ga0150985_1157772481	3300012212	Avena Fatua Rhizosphere	NNQKKDIFNQKVKNNGNFFSRKFFKDLGIVESVGDGIINILGLQRAANGEMVEICTSEQNQKGLILNLGPK*
Ga0150985_1163688951	3300012212	Avena Fatua Rhizosphere	MFFGRNFFNNIGIVESVGDGIINILGLQNAVNGEMVEICVSTDIKGSKTVKALVLNLGPR
Ga0150985_1168666321	3300012212	Avena Fatua Rhizosphere	LGIVESVGDGIINILGLQKAANGEMVEICTSEQNQKGLILNLGPK*
Ga0150985_1169026721	3300012212	Avena Fatua Rhizosphere	MFFSRSFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLNGPQAQKALILNLGPR
Ga0150985_1177467372	3300012212	Avena Fatua Rhizosphere	MFFSRKFFNNIGIVESVGDGIVNILGLQNVANGEMVEICILTNLQGVQTQKA
Ga0150985_1225251932	3300012212	Avena Fatua Rhizosphere	SRKFFKDLGIVESVGDGIINILGLQKAANGEMVEICTSEENQKGLILNLGPK*
Ga0150985_1230237942	3300012212	Avena Fatua Rhizosphere	MGIFFSRKFFKDLGIVESVGDGIINILGLQKAANGEMVEICTSEQNQKGLILNLGPK*
Ga0134022_10232391	3300012371	Grasslands Soil	KFFKDLGIVESVGDGIINILGLQKAANGEMVEICTSEQNQKGLILNLGPK*
Ga0134047_12287602	3300012380	Grasslands Soil	FFKNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLKGPKTQKALILNLGPK*
Ga0134059_10013501	3300012402	Grasslands Soil	MFFSKKFFNNIGIVESVGDGIVNILGLQNVANGEMVEICILTNLQGVQTQKALVLNLGPR
Ga0150984_1001226823	3300012469	Avena Fatua Rhizosphere	FFKDLGIVESVGDGIINILGLQKAANGEMVEICTSEQNQKGLILNLGPK*
Ga0150984_1001571002	3300012469	Avena Fatua Rhizosphere	MINFFFSRKFFKDLGIVESVGDGIINILGLQKAANGEMVEICTSEATQKGLILNLGPK*
Ga0150984_1022986861	3300012469	Avena Fatua Rhizosphere	KIKNSKNFFAGRFFKDLGIVESVGDGIINILGLQKAANGEMVEICTSEQNQKGLILNLGPK*
Ga0150984_1055678951	3300012469	Avena Fatua Rhizosphere	MFFSRAFFKNIGIVESVGDGIINILGLQNVANGEVVEIYISTTLKGPKTQKALVLNLGPK
Ga0150984_1058881884	3300012469	Avena Fatua Rhizosphere	MKTFFSRKFFKDLGIVESVGDGIINILGLQKAANGEMVEICTSEQNQKGLILNLGPK*
Ga0150984_1088643747	3300012469	Avena Fatua Rhizosphere	GAFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYISTTLRGPKTQKALILNLGPK*
Ga0150984_1135582611	3300012469	Avena Fatua Rhizosphere	MYFSKSFFKNIGIVESVGDGIINILGLQNVANGEMVEIYISTTIKGKNIQKALVLNLGPK
Ga0150984_1177623411	3300012469	Avena Fatua Rhizosphere	MFFSRKFFNNIGIVESVGDGIINILGLQNVANGEMVEISIFTNLQGSQTQKALVLNLGSK
Ga0150984_1202522381	3300012469	Avena Fatua Rhizosphere	MFFSRIFFKNIGIVESVGDGIVNILGLQNVANGEMVEICLYTTIKGPKVQKALVLNLGPK
Ga0150984_1212418472	3300012469	Avena Fatua Rhizosphere	NIGIVESVGDGIVNILGLQNVANGEMVEICILTNLQGVQTQKALVLNLGPR*
Ga0137419_119042092	3300012925	Vadose Zone Soil	KSNKNFFSRKFFKDLGIVESVGDGIINILGLQKAANGEMVEICTSEKNQKGLILNLGPK*
Ga0157380_108097352	3300014326	Switchgrass Rhizosphere	LNQKIKNNENFFSRKFFKDLGIVESVGDGIINILGLQKAANGEMVEICTSEQNQKGLILNLGPK*
Ga0181500_14672712	3300016728	Peatland	MKIKKKFFSSSFLNKIGVVESVSDGIINILGLKNVVNGEMVEICMSTTLKGRKTQKALVLNLGSK
Ga0181510_12219572	3300019240	Peatland	MFFSKLFFKNIGIIESVGDGIINILGLQNAANGEMVEIYTTISIKGLQVQKALVLNLGPK
Ga0181506_11685842	3300019260	Peatland	MFFSRKFFNNIGIVESVGDGIVNILGLQNVANGEMVEICIFTNLQGIQTQKALVLNLGPR
Ga0181514_15251612	3300019268	Peatland	MFFSRSFFKNIGIVESVGDGIINILGLQNAANGEMVEIYTTISIKGLQVQKALVLNLGPK
Ga0173479_103702831	3300019362	Soil	MFFSRSFFKNIGIVESVGDGIVNILGLQNVANGEMVEVYISTTLKGPKTQKALILNL
Ga0206355_11351542	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	MFFSRKFFNNIGIVESVGDGIVNILGLQNVANGEMVEICISTNLQGIQTQKALVLNLGPR
Ga0213851_17989012	3300021860	Watersheds	MFFSRPFFNNIGIVESVGDGIVNILGLQNAANGEMVEICISTNLQGLNSQKALVLNLGPR
Ga0242666_10212731	3300022721	Soil	KSLNQKFKNSKNFFSRKFFKDLGIVESVGDGIINILGLQKAANGEMVEICTSEINQKGLILNLGPK
Ga0207658_102135032	3300025986	Switchgrass Rhizosphere	MFFSRHFFKNIGIVESVGDGIVNILGLQNVANGEMVEVYISTTLKGPKTQKALILNLGPK
Ga0075378_100201832	3300030779	Soil	MFFSRSFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLKGPVTQKALILNLGPK
Ga0138304_12436241	3300030790	Soil	RKFFKDLGIVESVGDGIINILGLQKAANGEMVEICTSEQNQKGLILNLGPK
Ga0308178_10317031	3300030990	Soil	PSTVNYLIKMFFSRKFFNNIGIVESVGDGIVNILGLQNVANGEMVEICISTNLQGVQTQKALVLNLGPR
Ga0170834_1001967333	3300031057	Forest Soil	FSRSFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLKGPVTQKALILNLGPK
Ga0170834_1112242591	3300031057	Forest Soil	MFFSRNFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLKGPVTQKALVFKFRAKMS
Ga0170824_1054995401	3300031231	Forest Soil	MFFSRNFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLKGPVTQKALV
Ga0307405_114045171	3300031731	Rhizosphere	MFFSRKFFNNIGIVESVGDGIVNILGLQNVANGEMVEICILTNIQGVQTQKALVLNLGPRXVSAVCLSSDF
Ga0316048_1090381	3300031809	Soil	MYFTRTFFNNIGVVESVGDGIINILGLQNAVNGEMIEIYTSLTLNGIQSQKA
Ga0348332_109862392	3300032515	Plant Litter	KNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLKGPVTQKALILNLGPK
Ga0314785_001272_52_234	3300034479	Soil	MFFSRSFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLKGPQAQKALILNLGPR
Ga0316598_232484_48_230	3300034652	Untreated Peat Soil	MFFSRSFFNNIGIVESVGDGIVNILGLQNAANGEMVEICISTNIEGVKIQKALVLNLGPR
Ga0314780_007477_1160_1342	3300034659	Soil	MFFSRSFFKNIGIVESVGDGIVNILGLQNVANGEMVEVYINTTLKGPKTQKALILNLGPK
Ga0314780_007751_173_355	3300034659	Soil	MFFSRSFFKNIGIVESVGDGIVNILGLQNVANGEMVEVYISTTLKGPKTQKALILNLGPK
Ga0314780_145554_2_166	3300034659	Soil	FFNNIGIVESVGDGIVNILGLQNVANGEMVEICILTNLQGIQTQKALVLNLGPR
Ga0314781_007970_35_217	3300034660	Soil	MFFSRKFFNNIGIVESVGDGIVNILGLQNVANGEMVEICILTNLQGIQTQKALVLNLGPR
Ga0314782_012874_2_166	3300034661	Soil	FFKNIGIVESVGDGIVNILGLQNVANGEMVEVYINTTLKGPKTQKALILNLGPK
Ga0314782_063877_440_622	3300034661	Soil	MFFSKSYFKNIGIVESVGDGIINVLGLQNVVNGEMIEIYISTTLTGPKTQKALVLNLGPK
Ga0314782_131928_311_493	3300034661	Soil	MFFGRNFFNNIGIVESVGDGIINILGLQNAVNGEMVEICISTDIKGRKIVKALVLNLGPR
Ga0314783_099590_373_555	3300034662	Soil	MFFSRSFFKNIGIVESVGDGIVNILGLQNVANGEMVEIYINTTLKGPKTQKALILNLGPK
Ga0314786_011100_2_196	3300034664	Soil	ENLNIKNEKFFFSRKFFKDLGIVESVGDGIINILGLQKAANGEMVEICTSDANQKGLILNLGPK
Ga0314792_258747_1_159	3300034667	Soil	NNIGIVESVGDGIVNILGLQNVANGEMVEICILTNLQGVQTQKALVLNLGPR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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