Metagenome Family F102583

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F102583
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	38 residues
Representative Sequence	VKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLY
Number of Associated Samples	17
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	7.92 %
% of genes near scaffold ends (potentially truncated)	98.02 %
% of genes from short scaffolds (< 2000 bps)	80.20 %
Associated GOLD sequencing projects	10
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (98.020 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater (84.158 % of family members)
Environment Ontology (ENVO)	Unclassified (84.158 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (84.158 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.84% β-sheet: 0.00% Coil/Unstructured: 63.16%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00078	RVT_1	1.98

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.02 %
All Organisms	root	All Organisms	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.02 %
Viruses	superkingdom	All Organisms → Viruses	0.99 %
cellular organisms	root	All Organisms → cellular organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.99 %

Scaffold	Taxonomy	Length	IMG/M Link
3300007516\|Ga0105050_10481303	Not Available	735	Open in IMG/M
3300007516\|Ga0105050_10536693	Not Available	687	Open in IMG/M
3300007516\|Ga0105050_10794500	Not Available	540	Open in IMG/M
3300007516\|Ga0105050_10839605	Not Available	522	Open in IMG/M
3300007519\|Ga0105055_10040536	Not Available	5066	Open in IMG/M
3300007519\|Ga0105055_10131547	Not Available	2567	Open in IMG/M
3300007519\|Ga0105055_10132481	Not Available	2556	Open in IMG/M
3300007519\|Ga0105055_10141026	Not Available	2458	Open in IMG/M
3300007519\|Ga0105055_10145485	Not Available	2409	Open in IMG/M
3300007519\|Ga0105055_10202795	Not Available	1947	Open in IMG/M
3300007519\|Ga0105055_10213953	Not Available	1879	Open in IMG/M
3300007519\|Ga0105055_10232782	Not Available	1775	Open in IMG/M
3300007519\|Ga0105055_10270486	Not Available	1599	Open in IMG/M
3300007519\|Ga0105055_10406062	All Organisms → Viruses → Predicted Viral	1190	Open in IMG/M
3300007519\|Ga0105055_10436570	Not Available	1127	Open in IMG/M
3300007519\|Ga0105055_10556689	Not Available	938	Open in IMG/M
3300007519\|Ga0105055_10613812	Not Available	871	Open in IMG/M
3300007519\|Ga0105055_10647766	Not Available	836	Open in IMG/M
3300007519\|Ga0105055_10822653	Not Available	699	Open in IMG/M
3300007519\|Ga0105055_10863142	Not Available	674	Open in IMG/M
3300007519\|Ga0105055_10886883	Not Available	661	Open in IMG/M
3300007519\|Ga0105055_10984881	Not Available	612	Open in IMG/M
3300007519\|Ga0105055_11016786	Not Available	598	Open in IMG/M
3300007519\|Ga0105055_11028416	Not Available	593	Open in IMG/M
3300007519\|Ga0105055_11039283	Not Available	589	Open in IMG/M
3300007519\|Ga0105055_11061905	Not Available	580	Open in IMG/M
3300007519\|Ga0105055_11260252	Not Available	514	Open in IMG/M
3300007520\|Ga0105054_10129996	Not Available	2539	Open in IMG/M
3300007520\|Ga0105054_10182492	Not Available	2046	Open in IMG/M
3300007520\|Ga0105054_10379308	Not Available	1221	Open in IMG/M
3300007520\|Ga0105054_10386803	Not Available	1203	Open in IMG/M
3300007520\|Ga0105054_10523891	Not Available	953	Open in IMG/M
3300007520\|Ga0105054_10619470	Not Available	836	Open in IMG/M
3300007520\|Ga0105054_10842739	Not Available	660	Open in IMG/M
3300007520\|Ga0105054_10886115	Not Available	636	Open in IMG/M
3300007520\|Ga0105054_11196169	Not Available	511	Open in IMG/M
3300007522\|Ga0105053_10121907	Not Available	2632	Open in IMG/M
3300007522\|Ga0105053_10142733	Not Available	2391	Open in IMG/M
3300007522\|Ga0105053_10408245	Not Available	1159	Open in IMG/M
3300007522\|Ga0105053_10508849	Not Available	979	Open in IMG/M
3300007522\|Ga0105053_10586998	Not Available	876	Open in IMG/M
3300007522\|Ga0105053_11102106	Not Available	545	Open in IMG/M
3300007522\|Ga0105053_11178348	Not Available	519	Open in IMG/M
3300007522\|Ga0105053_11227417	Not Available	504	Open in IMG/M
3300007523\|Ga0105052_10218233	Not Available	1283	Open in IMG/M
3300007523\|Ga0105052_10578776	Not Available	721	Open in IMG/M
3300007523\|Ga0105052_10776418	Not Available	604	Open in IMG/M
3300007523\|Ga0105052_10913830	Not Available	548	Open in IMG/M
3300007722\|Ga0105051_10081253	Not Available	2555	Open in IMG/M
3300007722\|Ga0105051_11240898	Not Available	528	Open in IMG/M
3300007722\|Ga0105051_11288964	Not Available	516	Open in IMG/M
3300007722\|Ga0105051_11301133	Not Available	514	Open in IMG/M
3300011188\|Ga0136587_1136992	Not Available	626	Open in IMG/M
3300011188\|Ga0136587_1184857	Not Available	543	Open in IMG/M
3300011188\|Ga0136587_1214263	Not Available	506	Open in IMG/M
3300012037\|Ga0136559_1007491	Not Available	2970	Open in IMG/M
3300012037\|Ga0136559_1074696	Not Available	892	Open in IMG/M
3300012037\|Ga0136559_1122625	Not Available	703	Open in IMG/M
3300012037\|Ga0136559_1131302	Not Available	681	Open in IMG/M
3300012037\|Ga0136559_1229176	Not Available	522	Open in IMG/M
3300012037\|Ga0136559_1248392	Not Available	503	Open in IMG/M
3300012269\|Ga0136560_1077260	Not Available	616	Open in IMG/M
3300012272\|Ga0136586_1072741	Not Available	797	Open in IMG/M
3300012272\|Ga0136586_1118470	Not Available	637	Open in IMG/M
3300012272\|Ga0136586_1188434	Not Available	517	Open in IMG/M
3300012272\|Ga0136586_1192023	Not Available	512	Open in IMG/M
3300027832\|Ga0209491_10114024	Not Available	2529	Open in IMG/M
3300027832\|Ga0209491_10134776	Not Available	2263	Open in IMG/M
3300027832\|Ga0209491_10274161	Not Available	1341	Open in IMG/M
3300027832\|Ga0209491_10406798	Not Available	961	Open in IMG/M
3300027832\|Ga0209491_10436514	Not Available	903	Open in IMG/M
3300027832\|Ga0209491_10466370	Not Available	851	Open in IMG/M
3300027832\|Ga0209491_10760227	Not Available	532	Open in IMG/M
3300027848\|Ga0209390_10078105	Not Available	3202	Open in IMG/M
3300027848\|Ga0209390_10101024	Not Available	2732	Open in IMG/M
3300027848\|Ga0209390_10147762	Not Available	2130	Open in IMG/M
3300027848\|Ga0209390_10286763	Not Available	1308	Open in IMG/M
3300027848\|Ga0209390_10301826	Not Available	1255	Open in IMG/M
3300027848\|Ga0209390_10511934	Not Available	793	Open in IMG/M
3300027848\|Ga0209390_10528293	Not Available	769	Open in IMG/M
3300027848\|Ga0209390_10816487	Not Available	508	Open in IMG/M
3300027983\|Ga0209284_10266603	Not Available	874	Open in IMG/M
3300027983\|Ga0209284_10347643	Not Available	740	Open in IMG/M
3300027983\|Ga0209284_10378065	Not Available	702	Open in IMG/M
3300027983\|Ga0209284_10503626	Not Available	581	Open in IMG/M
3300027983\|Ga0209284_10551457	Not Available	546	Open in IMG/M
3300028369\|Ga0306896_1064789	Not Available	568	Open in IMG/M
3300028413\|Ga0306870_1050531	Not Available	746	Open in IMG/M
3300032435\|Ga0335398_10053507	Not Available	4101	Open in IMG/M
3300032435\|Ga0335398_10071089	Not Available	3495	Open in IMG/M
3300032435\|Ga0335398_10090679	Not Available	3029	Open in IMG/M
3300032435\|Ga0335398_10160607	Not Available	2120	Open in IMG/M
3300032435\|Ga0335398_10649473	Not Available	699	Open in IMG/M
3300032435\|Ga0335398_10676548	Not Available	673	Open in IMG/M
3300032435\|Ga0335398_10727369	Not Available	630	Open in IMG/M
3300032435\|Ga0335398_10779076	Not Available	591	Open in IMG/M
3300032462\|Ga0335396_10356261	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300032462\|Ga0335396_10556349	Not Available	720	Open in IMG/M
3300032462\|Ga0335396_10626786	Not Available	667	Open in IMG/M
3300032462\|Ga0335396_10716030	Not Available	611	Open in IMG/M
3300032462\|Ga0335396_10893937	Not Available	526	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	84.16%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	15.84%

Habitat	Taxonomy	Distribution
Ice	Environmental → Aquatic → Freshwater → Ice	84.16%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	15.84%

Habitat	Taxonomy	Distribution
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	84.16%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	15.84%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	84.16%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	15.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental	Open in IMG/M
3300007519	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03	Environmental	Open in IMG/M
3300007520	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (megahit assembly)	Environmental	Open in IMG/M
3300007522	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01	Environmental	Open in IMG/M
3300007523	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03	Environmental	Open in IMG/M
3300007722	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (megahit assembly)	Environmental	Open in IMG/M
3300011188	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #563	Environmental	Open in IMG/M
3300012037	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #496	Environmental	Open in IMG/M
3300012269	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #497	Environmental	Open in IMG/M
3300012272	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #562	Environmental	Open in IMG/M
3300027832	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (SPAdes)	Environmental	Open in IMG/M
3300027848	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01 (SPAdes)	Environmental	Open in IMG/M
3300027983	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03 (SPAdes)	Environmental	Open in IMG/M
3300028369	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #562 (v2)	Environmental	Open in IMG/M
3300028413	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #496 (v2)	Environmental	Open in IMG/M
3300032435	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03 (spades assembly)	Environmental	Open in IMG/M
3300032462	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (spades assembly)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0105050_104813031	3300007516	Freshwater	MKAGQSLSKMRNPMALRAEGTAKVSEWFNIFVTAKKLY
Ga0105050_105366932	3300007516	Freshwater	KTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLY*
Ga0105050_107945001	3300007516	Freshwater	TGQSLSKMSNPTALHTEGTAQVSEWLNISDTAKKLYYG*
Ga0105050_108396051	3300007516	Freshwater	VKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLY*
Ga0105055_100405361	3300007519	Freshwater	KTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKQY*
Ga0105055_101315476	3300007519	Freshwater	MGWGQSLSKMSEPTALHIEGTAEVSEWFDISDTAKKLY*
Ga0105055_101324811	3300007519	Freshwater	RKVKTGQSLSKMSKPTALHTEGTTQVSEWLNISDTAKKLYYALS*
Ga0105055_101410261	3300007519	Freshwater	RKVKTGQSLSKMSKPTALHTEGTAQVSEWFNISDTAKKLY*
Ga0105055_101454851	3300007519	Freshwater	RKVKTGQSLSKMSKLTALHTEGTAQVSEWLNISDTAKKLY*
Ga0105055_102027954	3300007519	Freshwater	KAGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLY*
Ga0105055_102139533	3300007519	Freshwater	MQSLNKISEPTALHAEGTAQVSEWFNIFDTAKKLYQ
Ga0105055_102327822	3300007519	Freshwater	LSSAAEDLKVKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKL
Ga0105055_102704861	3300007519	Freshwater	RKAKTGQSFSKMSKPTALHTESAAQVSEWLNIFDTAKKLYK*
Ga0105055_104060621	3300007519	Freshwater	KVKTGQSLSKMSKPTALHTEGTAQVSEWMNISDTAKKLY*
Ga0105055_104365702	3300007519	Freshwater	VKMGQSLSKMSKPTALHTEGTAQVSEWLNFSDTAKKLY*
Ga0105055_105566891	3300007519	Freshwater	EQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLS*
Ga0105055_106138121	3300007519	Freshwater	LKKVKTGQSLSKMSKPTALHIEGTAQVSEWLNISDTAKKLY*
Ga0105055_106477661	3300007519	Freshwater	VKAGQSLSKVSKPTALHTEGTAQVSEWLNISDTDKKL
Ga0105055_108226531	3300007519	Freshwater	RKVKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKPY*
Ga0105055_108631422	3300007519	Freshwater	RKVKTGQSLSKMSKPTALHTEGIAQVSEWLNISGTAKKLY*
Ga0105055_108868831	3300007519	Freshwater	TGQSLSKMSKPTALHTEGTAQVSELLNISDTAKKLY*
Ga0105055_109848811	3300007519	Freshwater	RKVKTGQSLSKMSKPTALHTKGTAQVSEWLNISDTAKKLY*
Ga0105055_110167861	3300007519	Freshwater	RKVKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKQY*
Ga0105055_110284161	3300007519	Freshwater	GQSLSKMSNPTALHTEGTAQVSEWLNISDTAKKLY*
Ga0105055_110392832	3300007519	Freshwater	KVKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLY*
Ga0105055_110619052	3300007519	Freshwater	KVKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLC*
Ga0105055_112602521	3300007519	Freshwater	MKTVQNLDTVSKPTALHTEGTAQVLEWFNISDTAKK
Ga0105054_101299961	3300007520	Freshwater	RKVKTGQSLSKMSKPTALHTEGTTQVSEWLNISDTAKKLYYALS
Ga0105054_101824927	3300007520	Freshwater	RKVKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKELY*
Ga0105054_103793082	3300007520	Freshwater	GQSLSKMSKPTALHTEGTAQVSEWLNISATAKKLY*
Ga0105054_103868031	3300007520	Freshwater	KLKTGQSLSKMSKLTALHTEGTAQVSEWLNISDTAKQLY*
Ga0105054_105238911	3300007520	Freshwater	VKTGQSLSKMSKPTALHTEGTAQVSEWMNISDTAKKLY*
Ga0105054_106194701	3300007520	Freshwater	GQSLSKMSKPTALHTEGTAQVSEWLNISDAAKKLY*
Ga0105054_108427391	3300007520	Freshwater	KTGQSFSKMSKPTALHTEGTAQVSELLNISDTAKKLY*
Ga0105054_108861151	3300007520	Freshwater	RNVKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLY*
Ga0105054_111961691	3300007520	Freshwater	KVKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKQY*
Ga0105053_101219071	3300007522	Freshwater	RKVKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTATKLY*
Ga0105053_101427331	3300007522	Freshwater	KVKTGQSLSKMSKLTALHTEGTAQVSEWLNISDTAKKLY*
Ga0105053_104082451	3300007522	Freshwater	VKMGQSLSKMSKPTALHTEGTAQVSEWLNISDTAEKLY*
Ga0105053_105088491	3300007522	Freshwater	GQSLSKMSKPTALHTEGIAQVSEWLNISDTAKKLY*
Ga0105053_105869981	3300007522	Freshwater	AGQSLSKMTKPTALHTEGTAKVSELLNISDTAKKLY*
Ga0105053_111021061	3300007522	Freshwater	RKVKTGQSLSKMSNPTALHTEGTAHVSEWLNISDTAKKLY*
Ga0105053_111783481	3300007522	Freshwater	RKVKTGQSLSKMSKPTALHTEGAAQVSEWLNISDTTKKLY*
Ga0105053_112274171	3300007522	Freshwater	KAEQSLSKLSKPTALHTEDTAQVSEWLNISDTAKTLY*
Ga0105052_102182334	3300007523	Freshwater	MEQSLSTMSKPTALRTDGTAQVSEWLNISDTTKLQT
Ga0105052_105787761	3300007523	Freshwater	TGQSLSKMSNPTALHTEGTAQVSEWLNISDTAKQVY*
Ga0105052_107764181	3300007523	Freshwater	RKVKTGQSLSKMSKPTALHTEGTAQISKWLNISDTSKKLN*
Ga0105052_109138301	3300007523	Freshwater	KVKTGQSLSKMSKPTALHTEGTAQVSELLNISDTAQKLY*
Ga0105051_100812535	3300007722	Freshwater	AKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKEV*
Ga0105051_112408981	3300007722	Freshwater	GQSLSKMSNPTALHTEGTAQVSEWLNISDTAKKLYYG*
Ga0105051_112889641	3300007722	Freshwater	VKTGQSLSKMSKPTALHTEGTAQVSEWLNISDAAKKLY*
Ga0105051_113011331	3300007722	Freshwater	RKVKTGQSLSKMSKPTALHTKGTAQVSEWLNISDNANKLY*
Ga0136587_11369921	3300011188	Saline Lake	VSKKVNTGQSLSKMSKPTALHTEGTAQVSEWFNISDTAK
Ga0136587_11848572	3300011188	Saline Lake	GQSLSKMSKPTALHTKGTAQVSEWLNISDTAKKLY*
Ga0136587_12142631	3300011188	Saline Lake	TGQSLSKMSKPTALHTEDTAQVSEWLNISDTAKKLY*
Ga0136559_10074911	3300012037	Saline Lake	VKAGQSLSKMSKPTALHTIGTEQVSEWFNISDTAKN
Ga0136559_10746961	3300012037	Saline Lake	GQSLSKMSKPTALHTEGTAQVSEWLNISDTAKAVIAA*
Ga0136559_11226251	3300012037	Saline Lake	RKVKTGQSLSKMSKPTALHTEGTAQVSEWLKISDTAKKP
Ga0136559_11313021	3300012037	Saline Lake	QSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLY*
Ga0136559_12291761	3300012037	Saline Lake	KTGQSLSKMSKPTALHTGGTAQVSELLNISDTAKKLY*
Ga0136559_12483921	3300012037	Saline Lake	VKAEQSLSKLSKPTALHTEDTAQVSEWLNISDTAKK
Ga0136560_10772601	3300012269	Saline Lake	TGQSLSKMSKPTALRTEGTAQVSEWMNIFDTAKELY*
Ga0136586_10727411	3300012272	Saline Lake	RKVKMGQSLSKMSNPTALHTEGTTQVSEWLNIFDTAKKLY*
Ga0136586_11184703	3300012272	Saline Lake	VKTGQSLSKMSKPTALHTEGTALVSE*LDISDTAKKLY
Ga0136586_11884341	3300012272	Saline Lake	TGQSLSKMSKPTALHTEGTVQVSEWLNISDTAKKLY*
Ga0136586_11920231	3300012272	Saline Lake	KVKTGQSLSKMSKPTALHTEGTAQVSEWLNICDTAKKQY*
Ga0209491_101140245	3300027832	Freshwater	MGQSLSKLSKPTALHTEGIAQVSEWLNKSDTAKKL
Ga0209491_101347761	3300027832	Freshwater	RKVKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKELY
Ga0209491_102741612	3300027832	Freshwater	MGWGQSLSKMSEPTALHIEGTAEVSEWFDISDTAKKLY
Ga0209491_104067983	3300027832	Freshwater	KMGQSLSKMSKPTALHTEGTAQVSEWLNISDTAEKLY
Ga0209491_104365141	3300027832	Freshwater	GQSLSKMSKPTALHTEGTAQVSEWLNISATAKKLY
Ga0209491_104663701	3300027832	Freshwater	VKTGQSLSKMSKPTALHREGTAQVSEWLNISDTAKKLY
Ga0209491_107602271	3300027832	Freshwater	TGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKQLY
Ga0209390_100781051	3300027848	Freshwater	GQSLSKMSKPTALHTEGTAQVSEWLNIFDTAKNLY
Ga0209390_101010246	3300027848	Freshwater	RKVKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTATKLY
Ga0209390_101477624	3300027848	Freshwater	TGQSLSKMSKPTALHTEGTAQVSEWLNISDTAEKLY
Ga0209390_102867631	3300027848	Freshwater	GRKVKTGQSLSKMSKPTALHTEGTAQVSEWLNISGTAKKLY
Ga0209390_103018262	3300027848	Freshwater	RKVKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLY
Ga0209390_105119341	3300027848	Freshwater	KGEMGQSLSKMSKPTALHTEGTAQVSEWFNISDTAKKLY
Ga0209390_105282931	3300027848	Freshwater	VKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLH
Ga0209390_108164871	3300027848	Freshwater	VKTGQSLSKMRKPTALHTEGTAQVSEWLNISDTAKK
Ga0209284_102666033	3300027983	Freshwater	KVKTGQSLSKMSKPTALHSEGTAQVSEWLNISDTAKKLR
Ga0209284_103476431	3300027983	Freshwater	VMTGQSLSKMSNPTALHTEGTAQVSEWLNISDTAKQVY
Ga0209284_103780651	3300027983	Freshwater	MGQSLSKMSKPTALHTEGIAQVSEWLNISDTTKKLY
Ga0209284_105036261	3300027983	Freshwater	KVKTGQSLSKMSKPTALHTEGTAQVSEWLNISDATKKLY
Ga0209284_105514571	3300027983	Freshwater	GQSLSKTSKPTALHTEGTAQVSEWLNISDTAQKLY
Ga0306896_10647892	3300028369	Saline Lake	VKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKL
Ga0306870_10505311	3300028413	Saline Lake	VKTGQSLSKMSKPTALHTEGTAQVSEWLKISDTAKKP
Ga0335398_100535071	3300032435	Freshwater	KTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLC
Ga0335398_100710891	3300032435	Freshwater	SLSKMSKPTALHTEGTAQVSEWLNISESDTAKKLY
Ga0335398_100906794	3300032435	Freshwater	KGETGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLH
Ga0335398_101606074	3300032435	Freshwater	RKVKTGQSLSKMSKLTALHTEGTAQVSEWLNISDTAKKLY
Ga0335398_106494731	3300032435	Freshwater	TGQSLSKMSKLTALHTEGTAQVSEWLNISDTAKQLY
Ga0335398_106765481	3300032435	Freshwater	VISCWRKVKTGQSLSKMSKPTALHTEGAAQVSEWLNISDTTKKLY
Ga0335398_107273692	3300032435	Freshwater	LKTEQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLS
Ga0335398_107790761	3300032435	Freshwater	VKAEQSLSKLSKPTALHTEDTAQVSEWLNISDTAK
Ga0335396_103562613	3300032462	Freshwater	VKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLN
Ga0335396_105563491	3300032462	Freshwater	RKVKTGQSLSKMSKPTALHSEGTAQVSEWLNISDTAKKLR
Ga0335396_106267861	3300032462	Freshwater	VKTGQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLC
Ga0335396_107160301	3300032462	Freshwater	VKTGQSLSKVSKPTALHTEGTAQVSEWLNISDTAKKL
Ga0335396_108939371	3300032462	Freshwater	GQSLSKMSKPTALHTEGTAQVSEWLNISDTAKKLY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102583

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences