Metagenome / Metatranscriptome Family F102571

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102571
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	60 residues
Representative Sequence	MKNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Number of Associated Samples	87
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	58.42 %
% of genes near scaffold ends (potentially truncated)	29.70 %
% of genes from short scaffolds (< 2000 bps)	89.11 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.436 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (23.762 % of family members)
Environment Ontology (ENVO)	Unclassified (62.376 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (60.396 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.35% β-sheet: 0.00% Coil/Unstructured: 30.65%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF09643	YopX	22.77
PF01966	HD	2.97
PF00041	fn3	1.98
PF13614	AAA_31	0.99
PF00588	SpoU_methylase	0.99
PF02899	Phage_int_SAM_1	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.99
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.99
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.99
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.99
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.44 %
All Organisms	root	All Organisms	43.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.44 %
cellular organisms	root	All Organisms → cellular organisms	32.67 %
Viruses	superkingdom	All Organisms → Viruses	10.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.44 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	9.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.83 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	9.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.96 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.44 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	9.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.96 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.96 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.96 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.44 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	10.89 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	9.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.96 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.96 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	3.96 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.99 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.44 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	10.89 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	9.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	3.96 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	3.96 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	2.97 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.99 %
Idiomarinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Idiomarinaceae	0.99 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.44 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	10.89 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	9.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Candidatus Parcubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria	3.96 %
Exiguobacterium phage vB_EauM-23	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Exiguobacterium phage vB_EauM-23	1.98 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.99 %
unclassified Idiomarinaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Idiomarinaceae → unclassified Idiomarinaceae	0.99 %
Ralstonia phage RP13	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ralstonia phage RP13	0.99 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.99 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.44 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	10.89 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	9.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
unclassified Parcubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria	3.96 %
Exiguobacterium phage vB_EauM-23	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Exiguobacterium phage vB_EauM-23	1.98 %
Idiomarinaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Idiomarinaceae → unclassified Idiomarinaceae → Idiomarinaceae bacterium	0.99 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.99 %
Ralstonia phage RP13	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ralstonia phage RP13	0.99 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.99 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.44 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	10.89 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	9.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Candidatus Parcubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	3.96 %
Exiguobacterium phage vB_EauM-23	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Exiguobacterium phage vB_EauM-23	1.98 %
Idiomarinaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Idiomarinaceae → unclassified Idiomarinaceae → Idiomarinaceae bacterium	0.99 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.99 %
Ralstonia phage RP13	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ralstonia phage RP13	0.99 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.99 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002835\|B570J40625_100107924	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Exiguobacterium phage vB_EauM-23	3392	Open in IMG/M
3300003277\|JGI25908J49247_10063011	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	942	Open in IMG/M
3300003277\|JGI25908J49247_10072276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	862	Open in IMG/M
3300003404\|JGI25920J50251_10041663	Not Available	1273	Open in IMG/M
3300003404\|JGI25920J50251_10083440	Not Available	761	Open in IMG/M
3300003412\|JGI25912J50252_10073379	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	873	Open in IMG/M
3300003488\|JGI25919J51413_1010778	Not Available	704	Open in IMG/M
3300004764\|Ga0007754_1412196	Not Available	648	Open in IMG/M
3300005580\|Ga0049083_10080128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1140	Open in IMG/M
3300005580\|Ga0049083_10276659	Not Available	563	Open in IMG/M
3300005583\|Ga0049085_10061581	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1333	Open in IMG/M
3300005585\|Ga0049084_10184056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	718	Open in IMG/M
3300007544\|Ga0102861_1230106	Not Available	513	Open in IMG/M
3300007560\|Ga0102913_1133475	Not Available	803	Open in IMG/M
3300007562\|Ga0102915_1106964	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	916	Open in IMG/M
3300007597\|Ga0102919_1171756	Not Available	680	Open in IMG/M
3300007622\|Ga0102863_1266304	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	500	Open in IMG/M
3300007627\|Ga0102869_1215162	Not Available	513	Open in IMG/M
3300007708\|Ga0102859_1235495	Not Available	548	Open in IMG/M
3300007972\|Ga0105745_1231262	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	589	Open in IMG/M
3300007974\|Ga0105747_1318807	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	528	Open in IMG/M
3300008055\|Ga0108970_10113012	Not Available	500	Open in IMG/M
3300008107\|Ga0114340_1215966	Not Available	624	Open in IMG/M
3300008116\|Ga0114350_1044601	Not Available	1652	Open in IMG/M
3300009024\|Ga0102811_1183438	Not Available	782	Open in IMG/M
3300009051\|Ga0102864_1215683	Not Available	523	Open in IMG/M
3300009068\|Ga0114973_10292265	Not Available	870	Open in IMG/M
3300009155\|Ga0114968_10105742	Not Available	1715	Open in IMG/M
3300009161\|Ga0114966_10203125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1252	Open in IMG/M
3300009161\|Ga0114966_10483029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	709	Open in IMG/M
3300009165\|Ga0105102_10088863	All Organisms → Viruses → Predicted Viral	1432	Open in IMG/M
3300009170\|Ga0105096_10659188	Not Available	553	Open in IMG/M
3300011011\|Ga0139556_1058791	Not Available	574	Open in IMG/M
3300013004\|Ga0164293_10956046	Not Available	537	Open in IMG/M
3300013014\|Ga0164295_10801082	Not Available	729	Open in IMG/M
3300017761\|Ga0181356_1008870	Not Available	3894	Open in IMG/M
3300017761\|Ga0181356_1041626	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1611	Open in IMG/M
3300017774\|Ga0181358_1170091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	732	Open in IMG/M
3300017777\|Ga0181357_1228628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	653	Open in IMG/M
3300017778\|Ga0181349_1252917	Not Available	587	Open in IMG/M
3300017780\|Ga0181346_1166447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	815	Open in IMG/M
3300017780\|Ga0181346_1313268	Not Available	529	Open in IMG/M
3300017780\|Ga0181346_1331599	Not Available	508	Open in IMG/M
3300017784\|Ga0181348_1302676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	535	Open in IMG/M
3300017785\|Ga0181355_1341399	Not Available	553	Open in IMG/M
3300019784\|Ga0181359_1222889	Not Available	591	Open in IMG/M
3300020175\|Ga0206124_10238783	Not Available	707	Open in IMG/M
3300020480\|Ga0208201_101912	Not Available	1865	Open in IMG/M
3300020514\|Ga0208202_1004250	All Organisms → Viruses → Predicted Viral	2195	Open in IMG/M
3300020528\|Ga0208224_1014197	Not Available	1175	Open in IMG/M
3300020549\|Ga0207942_1010550	Not Available	1233	Open in IMG/M
3300020550\|Ga0208600_1021585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1027	Open in IMG/M
3300020570\|Ga0208465_1005210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2056	Open in IMG/M
3300021519\|Ga0194048_10182546	Not Available	781	Open in IMG/M
3300021961\|Ga0222714_10435993	Not Available	684	Open in IMG/M
3300021962\|Ga0222713_10219507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1258	Open in IMG/M
3300021962\|Ga0222713_10594559	Not Available	646	Open in IMG/M
3300022190\|Ga0181354_1085388	Not Available	1038	Open in IMG/M
3300024348\|Ga0244776_10183471	Not Available	1501	Open in IMG/M
3300024348\|Ga0244776_10698782	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	626	Open in IMG/M
3300024566\|Ga0256309_1186303	Not Available	504	Open in IMG/M
3300027131\|Ga0255066_1010321	All Organisms → Viruses → Predicted Viral	1432	Open in IMG/M
3300027142\|Ga0255065_1033284	Not Available	968	Open in IMG/M
3300027145\|Ga0255114_1009807	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2027	Open in IMG/M
3300027210\|Ga0208802_1005766	All Organisms → Viruses → Predicted Viral	1671	Open in IMG/M
3300027214\|Ga0208306_1070042	Not Available	590	Open in IMG/M
3300027247\|Ga0208679_1035536	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	979	Open in IMG/M
3300027287\|Ga0255135_1014864	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	994	Open in IMG/M
3300027292\|Ga0255134_1020163	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1161	Open in IMG/M
3300027333\|Ga0255138_1058413	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	650	Open in IMG/M
3300027335\|Ga0255130_1000180	All Organisms → cellular organisms → Bacteria	19029	Open in IMG/M
3300027418\|Ga0208022_1092848	Not Available	629	Open in IMG/M
3300027649\|Ga0208960_1038424	Not Available	1637	Open in IMG/M
3300027649\|Ga0208960_1094629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	821	Open in IMG/M
3300027659\|Ga0208975_1049792	All Organisms → cellular organisms → Bacteria → Proteobacteria	1289	Open in IMG/M
3300027659\|Ga0208975_1214208	Not Available	509	Open in IMG/M
3300027688\|Ga0209553_1016206	Not Available	3256	Open in IMG/M
3300027688\|Ga0209553_1076224	Not Available	1252	Open in IMG/M
3300027707\|Ga0209443_1000845	Not Available	20238	Open in IMG/M
3300027733\|Ga0209297_1023008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Idiomarinaceae → unclassified Idiomarinaceae → Idiomarinaceae bacterium	2948	Open in IMG/M
3300027736\|Ga0209190_1171236	Not Available	921	Open in IMG/M
3300027754\|Ga0209596_1305410	Not Available	631	Open in IMG/M
3300027770\|Ga0209086_10362924	Not Available	595	Open in IMG/M
3300027772\|Ga0209768_10303844	Not Available	669	Open in IMG/M
3300027808\|Ga0209354_10393660	Not Available	540	Open in IMG/M
3300028025\|Ga0247723_1001548	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	13360	Open in IMG/M
3300032275\|Ga0315270_10105241	All Organisms → Viruses → Predicted Viral	1657	Open in IMG/M
3300033981\|Ga0334982_0066039	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ralstonia phage RP13	1966	Open in IMG/M
3300033992\|Ga0334992_0218931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	935	Open in IMG/M
3300033992\|Ga0334992_0388811	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Exiguobacterium phage vB_EauM-23	629	Open in IMG/M
3300034019\|Ga0334998_0369109	Not Available	832	Open in IMG/M
3300034020\|Ga0335002_0431290	Not Available	723	Open in IMG/M
3300034023\|Ga0335021_0285652	Not Available	890	Open in IMG/M
3300034062\|Ga0334995_0078168	All Organisms → Viruses → Predicted Viral	2580	Open in IMG/M
3300034066\|Ga0335019_0169756	All Organisms → Viruses → Predicted Viral	1427	Open in IMG/M
3300034103\|Ga0335030_0474005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	795	Open in IMG/M
3300034106\|Ga0335036_0305290	Not Available	1055	Open in IMG/M
3300034116\|Ga0335068_0201818	Not Available	1042	Open in IMG/M
3300034279\|Ga0335052_0160491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1319	Open in IMG/M
3300034279\|Ga0335052_0657515	Not Available	518	Open in IMG/M
3300034283\|Ga0335007_0596060	Not Available	640	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.01%
Host-Associated	Host-Associated	0.99%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.02%
Terrestrial	Environmental → Terrestrial	0.99%
Plants	Host-Associated → Plants	0.99%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	77.23%
Marine	Environmental → Aquatic → Marine	20.79%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.99%
Leaf	Host-Associated → Plants → Leaf	0.99%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	38.61%
Lake	Environmental → Aquatic → Freshwater → Lake	28.71%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.85%
River	Environmental → Aquatic → Freshwater → River	7.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.98%
Coastal	Environmental → Aquatic → Marine → Coastal	1.98%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.99%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	31.68%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	27.72%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	14.85%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	7.92%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	6.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.99%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	23.76%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	15.84%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	14.85%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	7.92%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.92%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	7.92%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.93%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.98%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.98%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.98%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.99%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.99%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.99%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.99%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.99%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300003488	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN	Environmental	Open in IMG/M
3300004764	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007560	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300007627	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-02	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300011011	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1m	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020480	Freshwater microbial communities from Lake Mendota, WI - 16JUL2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020514	Freshwater microbial communities from Lake Mendota, WI - 27AUG2008 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020528	Freshwater microbial communities from Lake Mendota, WI - 26OCT2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020549	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020550	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020570	Freshwater microbial communities from Lake Mendota, WI - 31AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024566	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepA_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027131	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepA_8h	Environmental	Open in IMG/M
3300027142	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_0h	Environmental	Open in IMG/M
3300027145	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepA_8h	Environmental	Open in IMG/M
3300027210	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3 (SPAdes)	Environmental	Open in IMG/M
3300027214	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02 (SPAdes)	Environmental	Open in IMG/M
3300027247	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02 (SPAdes)	Environmental	Open in IMG/M
3300027287	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepA_8d	Environmental	Open in IMG/M
3300027292	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepC_8d	Environmental	Open in IMG/M
3300027333	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepA_8d	Environmental	Open in IMG/M
3300027335	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepB_8d	Environmental	Open in IMG/M
3300027418	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747 (SPAdes)	Environmental	Open in IMG/M
3300027649	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027688	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034020	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055	Environmental	Open in IMG/M
3300034023	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1001079245	3300002835	Freshwater	MKNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKSKLIIKLI*
JGI25908J49247_100630111	3300003277	Freshwater Lake	MSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK*
JGI25908J49247_100722763	3300003277	Freshwater Lake	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECXGSGKIAEAGIFSKYYKCEKCKGSGKGEAKIIKI*
JGI25920J50251_100416631	3300003404	Freshwater Lake	MKTRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNKKE*
JGI25920J50251_100834402	3300003404	Freshwater Lake	MKTRKQLNIFEMSVDEFVRHEEKERQRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK*
JGI25912J50252_100733792	3300003412	Freshwater Lake	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
JGI25919J51413_10107782	3300003488	Freshwater Lake	MKTRKQLNIFEMSVDEFVRHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK*
Ga0007754_14121962	3300004764	Freshwater Lake	MKTRKQLNIFEMSVDEFVRHEEKERQRKNLCGECRGSGKIAEAGIFSKYYKCEKCKGSGKNKKE*
Ga0049083_100801283	3300005580	Freshwater Lentic	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGIFSKYYKCEKCKGSGKGEAKIIKI*
Ga0049083_102766591	3300005580	Freshwater Lentic	MKNHKQLNVFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK*
Ga0049085_100615814	3300005583	Freshwater Lentic	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK*
Ga0049084_101840562	3300005585	Freshwater Lentic	MKNHNQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGTFSKYYECEKCKGSGKNK*
Ga0102861_12301062	3300007544	Estuarine	MENHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK*
Ga0102913_11334752	3300007560	Estuarine	MKNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGTFSKYYECEKCKGSGKNK*
Ga0102915_11069642	3300007562	Estuarine	MKNHKQLNVFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGTFSKYYECEKCKGSGKNK*
Ga0102919_11717563	3300007597	Estuarine	MKNQLNIFEMSFDEFVRHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0102863_12663041	3300007622	Estuarine	MKNRKQLNIFEMSFDEFVRHEEKERLRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK*
Ga0102869_12151622	3300007627	Estuarine	MKNQLNIFEMSFDEFVRHEEKERRRKNLCDECRGSGKIAEAGTFSKYYECEKCKGSGKNK
Ga0102859_12354953	3300007708	Estuarine	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGTFSKYYECEKCKGSG
Ga0105745_12312622	3300007972	Estuary Water	MSFDEFVQHEEKERQRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK*
Ga0105747_13188072	3300007974	Estuary Water	MKNRKQLNIFEMSFDEFVQHEEKERQRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK*
Ga0108970_101130122	3300008055	Estuary	MKNHKQLNIFEMSFDEFVQHEEKERQRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK*
Ga0114340_12159662	3300008107	Freshwater, Plankton	MSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGIFSKYYKCEKCKGSGKNK*
Ga0114350_10446011	3300008116	Freshwater, Plankton	MSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKSKLIIKLI*
Ga0102811_11834383	3300009024	Estuarine	MKNRKQLNIFEMSFDEFVRHEEKERLRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGS
Ga0102864_12156831	3300009051	Estuarine	MSFDEFVRHEEKERLRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK*
Ga0114973_102922653	3300009068	Freshwater Lake	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGTFSKYYKCEKCKGSGKNK*
Ga0114968_101057424	3300009155	Freshwater Lake	MSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGTFSKYYKCEKCKGSGKNK*
Ga0114966_102031252	3300009161	Freshwater Lake	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGIFSKYYKCEKCKGIGKNK
Ga0114966_104830291	3300009161	Freshwater Lake	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGIGKNK*
Ga0105102_100888634	3300009165	Freshwater Sediment	MKNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK*
Ga0105096_106591882	3300009170	Freshwater Sediment	MKNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKK*
Ga0139556_10587912	3300011011	Freshwater	MSVDEFVRHEEKERQRKNLCGECRGSGKIAEAGIFSKYYKCEKCKGSGKGEAKIIKI*
Ga0164293_109560463	3300013004	Freshwater	EMSFDEFVQHEEKERRRKNICDECRGSGKIAEAGTFSKYYKCEKCKGSGKNK*
Ga0164295_108010822	3300013014	Freshwater	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGTFSKYYECEKCKGSEKNK
Ga0181356_10088706	3300017761	Freshwater Lake	MKTRKELNIFEMSVDEFVRHEEKERQRKNLCGECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0181356_10416266	3300017761	Freshwater Lake	MKNHNQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0181358_11700911	3300017774	Freshwater Lake	FEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGTFSKYYECEKCKGSGKNK
Ga0181357_12286281	3300017777	Freshwater Lake	IFEMSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGTFSKYYECEKCKGSGKNK
Ga0181349_12529171	3300017778	Freshwater Lake	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGTFSKYYKCEKCKGSGKNK
Ga0181346_11664471	3300017780	Freshwater Lake	RIMKNQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0181346_13132682	3300017780	Freshwater Lake	MKNHKQLNVFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGK
Ga0181346_13315993	3300017780	Freshwater Lake	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGK
Ga0181348_13026761	3300017784	Freshwater Lake	NQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGTFSKYYECEKCKGSGKNK
Ga0181355_13413993	3300017785	Freshwater Lake	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCE
Ga0181359_12228891	3300019784	Freshwater Lake	MKTRKQLNIFEMSVDEFVRHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0206124_102387832	3300020175	Seawater	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0208201_1019123	3300020480	Freshwater	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKSKLIIKLI
Ga0208202_10042501	3300020514	Freshwater	MKNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKSKLIIKLI
Ga0208224_10141973	3300020528	Freshwater	MKNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0207942_10105504	3300020549	Freshwater	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKSKLI
Ga0208600_10215852	3300020550	Freshwater	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0208465_10052104	3300020570	Freshwater	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKSKLIIKLI
Ga0194048_101825463	3300021519	Anoxic Zone Freshwater	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIADAGIFSKYYKCEKCKGSGKNK
Ga0222714_104359932	3300021961	Estuarine Water	MKNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGMFSKYYKCEKCKG
Ga0222713_102195073	3300021962	Estuarine Water	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0222713_105945592	3300021962	Estuarine Water	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGMFSKYYKCEKCKGSGKNK
Ga0181354_10853881	3300022190	Freshwater Lake	KTRKQLNIFEMSVDEFVRHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKN
Ga0244776_101834712	3300024348	Estuarine	MKNHKQLNVFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGTFSKYYECEKCKGSGKNK
Ga0244776_106987821	3300024348	Estuarine	DEFVQHEEKERRRKNLCDECRGSGKIAEAGTFSKYYECEKCKGSGKNK
Ga0256309_11863031	3300024566	Freshwater	KNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSEKN
Ga0255066_10103213	3300027131	Freshwater	MKNHKQLNIFEMSFDEFVQHEEKERQRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0255065_10332842	3300027142	Freshwater	MKNHKQLNIFEMSFDEFVQHEEKERQRKNLCDECRGSGKMAEAGIFSKYYKCEKCKGSGKNK
Ga0255114_10098074	3300027145	Freshwater	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGTFSKYYECEKCKGSGKNK
Ga0208802_10057665	3300027210	Estuarine	MKNRKQLNIFEMSFDEFVRHEEKERLRKNLCDECRGSGKIAEAGIFSKYYKCE
Ga0208306_10700422	3300027214	Estuarine	MKNRKQLNIFEMSFDEFVRHEEKERLRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0208679_10355361	3300027247	Estuarine	MKNRKQLNIFEMSFDEFVRHEEKERLRKNLCDECRGSGKIAEAGIFSKYYKCEK
Ga0255135_10148643	3300027287	Freshwater	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKGEAKIIKI
Ga0255134_10201632	3300027292	Freshwater	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIADAGTFSKYYECEKCKGSGKNK
Ga0255138_10584131	3300027333	Freshwater	KNQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNKFDLL
Ga0255130_10001802	3300027335	Freshwater	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYECEKCKGSGKNK
Ga0208022_10928482	3300027418	Estuarine	MKNRKQLNIFEMSFDEFVRHEEKERLRKNLCDECRGSGKIAEAGTFSKYYECEKCKGSGKNK
Ga0208960_10384245	3300027649	Freshwater Lentic	SFDEFVQHEEKERRRKNLCDECHGSGKIAEAGIFSKYYKCEKCKGSGKGEAKIIKI
Ga0208960_10946291	3300027649	Freshwater Lentic	SFDEFVQHEEKERRRKNLCDECHGSGKIAEAGTFSKYYECEKCKGSGKNK
Ga0208975_10497924	3300027659	Freshwater Lentic	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGTFSKYYECEKCKGSGKNK
Ga0208975_12142082	3300027659	Freshwater Lentic	MSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNKFDLL
Ga0209553_10162066	3300027688	Freshwater Lake	MKTRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0209553_10762241	3300027688	Freshwater Lake	KQLNIFEMSVDEFVRHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0209443_100084533	3300027707	Freshwater Lake	MKTRKQLNIFEMSVDEFVRHEEKERQRKNLCGECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0209297_10230087	3300027733	Freshwater Lake	MKNQLNIFEMSFDEFVQHEEKERRMKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0209190_11712362	3300027736	Freshwater Lake	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGTFSKYYKCEKCKGSGKNK
Ga0209596_13054103	3300027754	Freshwater Lake	NHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0209086_103629243	3300027770	Freshwater Lake	KQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGTFSKYYKCEKCKGSGKNK
Ga0209768_103038441	3300027772	Freshwater Lake	MSFDEFVQHEEKERRRKNLCDECRGSGKIADAGIFSKYYKCEKCKGSGKNK
Ga0209354_103936601	3300027808	Freshwater Lake	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKC
Ga0247723_100154839	3300028025	Deep Subsurface Sediment	MKNHKQLNVFEMSFDEFVQHEEKERRRKNLCDECRGSGTIAEAGIFSKYYKCEKCKGSGKNK
Ga0315270_101052413	3300032275	Sediment	MKNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCEGSGKNK
Ga0334982_0066039_1303_1491	3300033981	Freshwater	MKNRKQLNIFEMSFDEFVRHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKSK
Ga0334992_0218931_333_515	3300033992	Freshwater	MKNQLNIFEMSFDEFIQHEDKERRRKNLCDECHGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0334992_0388811_72_272	3300033992	Freshwater	MKNQLNIFEMSFDEFVQHEEKERRRKNLCDECHGSGKIAEAGIFSKYYKCEKCKGIGKGEAKIIKI
Ga0334998_0369109_349_567	3300034019	Freshwater	MKIEIMNSEEFKNRNQLNIFEMSFDEFVRHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKSK
Ga0335002_0431290_1_150	3300034020	Freshwater	FDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK
Ga0335021_0285652_736_888	3300034023	Freshwater	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYK
Ga0334995_0078168_1669_1857	3300034062	Freshwater	MKNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKSK
Ga0335019_0169756_636_824	3300034066	Freshwater	MKNHNQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKSK
Ga0335030_0474005_378_566	3300034103	Freshwater	MKNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGTFSKYYECEKCKGSGKNK
Ga0335036_0305290_3_173	3300034106	Freshwater	MKNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKG
Ga0335068_0201818_867_1040	3300034116	Freshwater	MKNHKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGS
Ga0335052_0160491_1137_1319	3300034279	Freshwater	MKNRKQLNIFEMSFDEFVRHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGK
Ga0335052_0657515_1_183	3300034279	Freshwater	MKNRKQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGK
Ga0335007_0596060_440_628	3300034283	Freshwater	MKNHNQLNIFEMSFDEFVQHEEKERRRKNLCDECRGSGKIAEAGIFSKYYKCEKCKGSGKNK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102571

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences