Metagenome / Metatranscriptome Family F102554

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102554
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	81 residues
Representative Sequence	IIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAQAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Number of Associated Samples	81
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	0.99 %
% of genes near scaffold ends (potentially truncated)	96.04 %
% of genes from short scaffolds (< 2000 bps)	98.02 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (66.337 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (29.703 % of family members)
Environment Ontology (ENVO)	Unclassified (57.426 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (56.436 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.43% β-sheet: 0.00% Coil/Unstructured: 47.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13482	RNase_H_2	57.43
PF10108	DNA_pol_B_exo2	20.79
PF03104	DNA_pol_B_exo1	3.96
PF00929	RNase_T	0.99
PF13539	Peptidase_M15_4	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0417	DNA polymerase B elongation subunit	Replication, recombination and repair [L]	3.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.09 %
Unclassified	root	N/A	8.91 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	68.32 %
cellular organisms	root	All Organisms → cellular organisms	22.77 %
Unclassified	root	N/A	8.91 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	66.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.77 %
Unclassified	root	N/A	8.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	66.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.77 %
Unclassified	root	N/A	8.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	66.34 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	22.77 %
Unclassified	root	N/A	8.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	66.34 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	22.77 %
Unclassified	root	N/A	8.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	22.77 %
Unclassified	root	N/A	8.91 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	3.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
unclassified Methylophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae	22.77 %
Unclassified	root	N/A	8.91 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	22.77 %
Unclassified	root	N/A	8.91 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000124\|BS_KBA_SWE12_21mDRAFT_c10003856	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5259	Open in IMG/M
3300000124\|BS_KBA_SWE12_21mDRAFT_c10160114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	539	Open in IMG/M
3300000929\|NpDRAFT_10295451	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	507	Open in IMG/M
3300003277\|JGI25908J49247_10100265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	698	Open in IMG/M
3300003393\|JGI25909J50240_1096405	Not Available	588	Open in IMG/M
3300003394\|JGI25907J50239_1072598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	681	Open in IMG/M
3300003394\|JGI25907J50239_1087614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	610	Open in IMG/M
3300003394\|JGI25907J50239_1114987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	523	Open in IMG/M
3300003404\|JGI25920J50251_10052653	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1069	Open in IMG/M
3300003411\|JGI25911J50253_10191597	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	568	Open in IMG/M
3300003488\|JGI25919J51413_1020728	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	516	Open in IMG/M
3300003488\|JGI25919J51413_1021893	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	504	Open in IMG/M
3300003491\|JGI25924J51412_1058273	Not Available	598	Open in IMG/M
3300003493\|JGI25923J51411_1038975	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	888	Open in IMG/M
3300003499\|JGI25930J51415_1079305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	546	Open in IMG/M
3300003616\|JGI25928J51866_1113940	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	568	Open in IMG/M
3300005581\|Ga0049081_10178130	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	769	Open in IMG/M
3300005581\|Ga0049081_10201093	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	714	Open in IMG/M
3300005582\|Ga0049080_10043041	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1566	Open in IMG/M
3300005582\|Ga0049080_10110039	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	934	Open in IMG/M
3300005582\|Ga0049080_10170413	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	725	Open in IMG/M
3300005583\|Ga0049085_10302277	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	519	Open in IMG/M
3300005943\|Ga0073926_10027560	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1054	Open in IMG/M
3300007620\|Ga0102871_1223414	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	522	Open in IMG/M
3300007636\|Ga0102856_1033810	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	782	Open in IMG/M
3300007642\|Ga0102876_1093306	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	819	Open in IMG/M
3300008259\|Ga0114841_1238904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	608	Open in IMG/M
3300008450\|Ga0114880_1127051	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	950	Open in IMG/M
3300008450\|Ga0114880_1198869	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	673	Open in IMG/M
3300008450\|Ga0114880_1206548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	653	Open in IMG/M
3300009068\|Ga0114973_10118699	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1490	Open in IMG/M
3300009086\|Ga0102812_10317465	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	847	Open in IMG/M
3300009160\|Ga0114981_10667958	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	550	Open in IMG/M
3300009185\|Ga0114971_10139189	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1466	Open in IMG/M
3300009185\|Ga0114971_10609251	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	603	Open in IMG/M
3300009819\|Ga0105087_1035803	Not Available	770	Open in IMG/M
3300010312\|Ga0102883_1099367	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	845	Open in IMG/M
3300010885\|Ga0133913_10953181	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2223	Open in IMG/M
3300012282\|Ga0157136_1007272	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	690	Open in IMG/M
3300012663\|Ga0157203_1030310	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	760	Open in IMG/M
3300013005\|Ga0164292_10239428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1270	Open in IMG/M
3300013372\|Ga0177922_10490829	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	663	Open in IMG/M
3300013372\|Ga0177922_11282901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	503	Open in IMG/M
3300015050\|Ga0181338_1042671	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	672	Open in IMG/M
3300017716\|Ga0181350_1098879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	720	Open in IMG/M
3300017736\|Ga0181365_1072473	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	848	Open in IMG/M
3300017736\|Ga0181365_1159936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	531	Open in IMG/M
3300017736\|Ga0181365_1170641	Not Available	510	Open in IMG/M
3300017774\|Ga0181358_1138196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	842	Open in IMG/M
3300018682\|Ga0188851_1015622	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	943	Open in IMG/M
3300019784\|Ga0181359_1112115	Not Available	986	Open in IMG/M
3300019784\|Ga0181359_1168097	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	736	Open in IMG/M
3300020151\|Ga0211736_10135147	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	611	Open in IMG/M
3300020151\|Ga0211736_10803231	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	634	Open in IMG/M
3300020205\|Ga0211731_10491726	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	520	Open in IMG/M
3300020525\|Ga0207938_1032606	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	804	Open in IMG/M
3300021961\|Ga0222714_10314297	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	854	Open in IMG/M
3300021962\|Ga0222713_10528813	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	700	Open in IMG/M
3300021963\|Ga0222712_10148051	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1587	Open in IMG/M
3300022200\|Ga0196901_1160824	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	742	Open in IMG/M
3300024262\|Ga0210003_1385026	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	513	Open in IMG/M
3300024348\|Ga0244776_10630613	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	672	Open in IMG/M
3300027278\|Ga0208439_1102626	Not Available	508	Open in IMG/M
3300027393\|Ga0209867_1021149	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	934	Open in IMG/M
3300027608\|Ga0208974_1160661	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	564	Open in IMG/M
3300027621\|Ga0208951_1066485	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1025	Open in IMG/M
3300027627\|Ga0208942_1184818	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	542	Open in IMG/M
3300027631\|Ga0208133_1036840	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1209	Open in IMG/M
3300027656\|Ga0209357_1078158	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	974	Open in IMG/M
3300027688\|Ga0209553_1210122	Not Available	628	Open in IMG/M
3300027688\|Ga0209553_1251254	Not Available	553	Open in IMG/M
3300027732\|Ga0209442_1200011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	740	Open in IMG/M
3300027763\|Ga0209088_10191688	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	879	Open in IMG/M
3300027772\|Ga0209768_10204975	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	884	Open in IMG/M
3300027785\|Ga0209246_10415104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	504	Open in IMG/M
3300027798\|Ga0209353_10208104	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	855	Open in IMG/M
3300027808\|Ga0209354_10440554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	502	Open in IMG/M
3300031539\|Ga0307380_10219020	All Organisms → Viruses → Predicted Viral	1823	Open in IMG/M
3300031565\|Ga0307379_10240478	All Organisms → Viruses → Predicted Viral	1823	Open in IMG/M
3300031565\|Ga0307379_10369839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1385	Open in IMG/M
3300031566\|Ga0307378_10304869	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1503	Open in IMG/M
3300031707\|Ga0315291_10542571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1068	Open in IMG/M
3300031707\|Ga0315291_11360003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	568	Open in IMG/M
3300031857\|Ga0315909_10894887	Not Available	548	Open in IMG/M
3300031885\|Ga0315285_10776218	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	604	Open in IMG/M
3300031999\|Ga0315274_11939252	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	532	Open in IMG/M
3300032046\|Ga0315289_10436456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1285	Open in IMG/M
3300032053\|Ga0315284_11564327	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	695	Open in IMG/M
3300032053\|Ga0315284_11928341	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	602	Open in IMG/M
3300032143\|Ga0315292_11199856	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	624	Open in IMG/M
3300032156\|Ga0315295_11209330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	740	Open in IMG/M
3300032156\|Ga0315295_11475209	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	656	Open in IMG/M
3300032173\|Ga0315268_11043184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	824	Open in IMG/M
3300032342\|Ga0315286_11160742	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	758	Open in IMG/M
3300032401\|Ga0315275_12646863	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	516	Open in IMG/M
3300033233\|Ga0334722_10687523	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	727	Open in IMG/M
3300033995\|Ga0335003_0123380	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1316	Open in IMG/M
3300034063\|Ga0335000_0164894	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1456	Open in IMG/M
3300034071\|Ga0335028_0585799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	602	Open in IMG/M
3300034102\|Ga0335029_0717636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	539	Open in IMG/M
3300034356\|Ga0335048_0269732	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	898	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	93.07%
Terrestrial	Environmental → Terrestrial	6.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	77.23%
Marine	Environmental → Aquatic → Marine	15.84%
Soil	Environmental → Terrestrial → Soil	6.93%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	39.60%
Lake	Environmental → Aquatic → Freshwater → Lake	35.64%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.96%
Clay	Environmental → Terrestrial → Soil → Clay	3.96%
Sand	Environmental → Terrestrial → Soil → Sand	2.97%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.98%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.99%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.99%
Coastal	Environmental → Aquatic → Marine → Coastal	0.99%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	38.61%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	21.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	13.86%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.96%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.96%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.97%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.98%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.99%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.99%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	29.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	13.86%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	8.91%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	6.93%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.94%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	5.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.94%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.97%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.97%
Marine	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine	1.98%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.99%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.99%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.99%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.99%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.99%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.99%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.99%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.99%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000124	Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 12_21m	Environmental	Open in IMG/M
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003488	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN	Environmental	Open in IMG/M
3300003491	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD	Environmental	Open in IMG/M
3300003493	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN	Environmental	Open in IMG/M
3300003499	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN	Environmental	Open in IMG/M
3300003616	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005943	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007636	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3	Environmental	Open in IMG/M
3300007642	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300010312	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012282	Freshwater microbial communities from Central Basin Methane Hotpot in Lake Erie, Ontario, Canada - Station 1365 - Bottom - Depth 20.5m	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300018682	Metatranscriptome of marine microbial communities from Baltic Sea - GS680_0p1	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020525	Freshwater microbial communities from Lake Mendota, WI - 05MAR2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300027278	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703 (SPAdes)	Environmental	Open in IMG/M
3300027393	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14 (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027688	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034063	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BS_KBA_SWE12_21mDRAFT_1000385614	3300000124	Marine	IIHDSIVWEKFITTKDTIIKYKSVYVPKTKIELKREYKLKIKTXYKDXIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFAREKYLF*
BS_KBA_SWE12_21mDRAFT_101601142	3300000124	Marine	IRITTLDSIPVIINNDIIWEKFITTKDTIIKYRTVYTPLTRQDKRIQYKLKVKTIYKDRIVEKAQAKATRPRANGNLSLLFVGVGIGLLLSYLFKFARERYLF*
NpDRAFT_102954511	3300000929	Freshwater And Marine	WEKFITTKDTIIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF*
JGI25908J49247_101002652	3300003277	Freshwater Lake	IRITTLDSIPVIIHDSIVWEKFITTKDTIIKYKTTYVPRTRYQERLAYKLKIKTIYKDRIVEKAQAKATRPRPRGNLSLLFVGVGIGLLLSYLFKFAREKYLW*
JGI25909J50240_10964052	3300003393	Freshwater Lake	RYQEKLAYKLKVKTIYKDRIVKKAQAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAR*
JGI25907J50239_10725982	3300003394	Freshwater Lake	TGDTIRITTLDSIPVIINNDIIWEKFITTKDTIIKYRTVYVPKTKIELKREYKLKVKTIYKDRIVEKAKAKASQPRPRGNLSLLFVGVGIGLLLSYLFKFVKDKYLL*
JGI25907J50239_10876141	3300003394	Freshwater Lake	VWEKFITTKDTIIKYKTTYVPRTRYQERLAYKLKIKTIYKDRIVEKAQAKATRPRPRGNLSLLFVGVGIGLLLSYLFKFAREKYLW*
JGI25907J50239_11149871	3300003394	Freshwater Lake	EETGDTIRIMSVDSIPIIINKTIVWEKFITTKDTIIKYRTTYVPRTRYQEKLAYKLKVKTIYKDRIVKKAQAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFARXKYLW*
JGI25920J50251_100526531	3300003404	Freshwater Lake	IIKYKTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFARERYLF*
JGI25911J50253_101915972	3300003411	Freshwater Lake	LAYKLKVKTIYKDRIVEKAKAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAREKYXF*
JGI25919J51413_10207281	3300003488	Freshwater Lake	PVIINNDIIWEKFITTKDTIIKYKTTYVPRTRYQERLAYKLKVKTIYKDRIVEKAKAKASQPRPRGNLSLLFVGVGIGLLLSYLFKFVKDKYLL*
JGI25919J51413_10218932	3300003488	Freshwater Lake	VYVPKTRQDKRIEYKIKVKTIYKDRVVEKAEAKAEVQKAKAERPKGRGNLSLLFVGVAIGLLLSYLFKFARQRYMF*
JGI25924J51412_10582732	3300003491	Freshwater Lake	VWEKFITTKDTIIKYRTTYVPRTRYQERLAYKLKVKTIYKDRIVEKAKAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF*
JGI25923J51411_10389751	3300003493	Freshwater Lake	TKDTIIKYNTVYVPKTRLDKKIEYKLKVKTIYKDRIVEKAKAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF*
JGI25930J51415_10793051	3300003499	Freshwater Lake	RITTLDSIPVIIHDSIVWEKFITTKDTIIKYKTTYVPRTRYQERLAYKLKVKTIYKDRIVEKAQAKASQPRPRGNLSLLFVGVGIGLLLSHLFKFTKDKYLL*
JGI25928J51866_11139402	3300003616	Freshwater Lake	TIIKYNTVYVPKTRLDKRIEYRLKVKTIYKDRIVEKAKAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0049081_101781302	3300005581	Freshwater Lentic	KTTYVPRTRYQERLAYKLKVKTIYKDRIVEKAKAKASQPRPRGNLSLLFVGVGIGLLLSYLFKFAKDKYLL*
Ga0049081_102010932	3300005581	Freshwater Lentic	FITTKDTIIKYRTVYVPRTRYQERLAYKLKVKTIYKDRIVEKAKAKASQPRPRGNLSLLFVGVGIGLLLSYLLKFAKDKYLL*
Ga0049080_100430411	3300005582	Freshwater Lentic	VYVPKTRLDKKIEYRLKVKTIYKDRIVEKAQAKATRPRPRGNLSLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0049080_101100392	3300005582	Freshwater Lentic	KYRTTYVPRTRYQERLAYKLKVKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFAREKYLW*
Ga0049080_101704132	3300005582	Freshwater Lentic	TTYVPRTRYQERLAYKLKVKTIYKDRIVEKAQAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFVRDKYLF*
Ga0049085_103022771	3300005583	Freshwater Lentic	KKIEYRLKVKTIYKDRIVEKAKAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFARERYLF
Ga0073926_100275601	3300005943	Sand	YNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATQPRPRGNLNLLFVGVGIGLLLSYLFKFARERYLF*
Ga0102871_12234141	3300007620	Estuarine	VYVPKTRQEKRIEYKLKIKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFAREKYLW*
Ga0102856_10338102	3300007636	Estuarine	KDTIIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAQAKATRPRANGNLSLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0102876_10933061	3300007642	Estuarine	VYVPKTRQEKRIEYKLKIKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFARERYLF*
Ga0114841_12389042	3300008259	Freshwater, Plankton	ETGDTIRITTLDSIPVIIHDSIVWEKFITTKDTIIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAQAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0114880_11270511	3300008450	Freshwater Lake	VYVPKTRLDKKIEYRLKVKTIYKDRIVEKAQAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFARDKYLW*
Ga0114880_11988692	3300008450	Freshwater Lake	RTEYVPKTRLDKKIEYRIKIKTIYKDRIVEKAKAKSEGQKAKSEANSNRPKGNLNLLFVGVGIGLLLSYLWKYAKKSVI*
Ga0114880_12065481	3300008450	Freshwater Lake	RITTLDSIPVIIHDSIVWEKFITTKDTIIKYKSVYVPRTRFQERLAYKLKVKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0114973_101186994	3300009068	Freshwater Lake	IEYRLKVKTIYKDRIVEKAKAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFARERYLF*
Ga0102812_103174651	3300009086	Estuarine	PKTRQEKRIEYKLKIKTIYKDRIVKKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFAREKYLW*
Ga0114981_106679582	3300009160	Freshwater Lake	IIKYNTVYVPKTRLDKKIEYRLKIKTIYKDRIVEKAQAKASQPRPRGNLSLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0114971_101391892	3300009185	Freshwater Lake	VIIHDSIVWEKFITTKDTIIKYRTTYVPRTRYQERLAYKLKVKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0114971_106092512	3300009185	Freshwater Lake	VIIHDSIVWEKFITTKDTIIKYRTTYVPRTRYQERLAYKLKIKTIYKDRIVKKAQAKATRPRGNLNLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0105087_10358031	3300009819	Groundwater Sand	LYNSIFSSDEFLPYYAIMNNNRDRIVWEKFITTKDTIIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAQAKATRPRANGNLSLLFVGVGIGLLLSYLFKFARERYLF*
Ga0102883_10993671	3300010312	Estuarine	TKDTIIKYNTVYVPKTRQEKRIEYKLKIKTIYKDRIVEKAQAKATQPKTRGNLNLLFVGVGIGLLLSYLFKFAREKYLW*
Ga0133913_109531811	3300010885	Freshwater Lake	TQYIPKTRLDKKIEYRIKIKTIYKDRIVEKAKARAEGQKAKSEVKLNRPKGNLNLLFVGVAIGLLLSYLFKFAREKYLF*
Ga0157136_10072721	3300012282	Freshwater	TKDTIIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAQAKATRPRANGNLSLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0157203_10303101	3300012663	Freshwater	IELKREFKLKIKTIYKDRIVEKAQAKATRPRTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0164292_102394282	3300013005	Freshwater	LDSIPVIIHYSIVWEKFITTKDTIIKYKSVYVPKTKIELKREYKLKIKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0177922_104908291	3300013372	Freshwater	DTIIKYKTTYVPRTRYQERLAYKLKVKTIYKDRIVEKAKAKATRPRANGNLSLLFVGVGIGLLLSYLFKFVKDKYLL*
Ga0177922_112829012	3300013372	Freshwater	CEETGDTIRITTLDSIPVIIHDSIVWEKFITTKDTIIKYRTTYVPRTRYQERLAYKLKIKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFARQRYMF*
Ga0181338_10426711	3300015050	Freshwater Lake	TIIKYRTVYVPKTRQEKRIEYKLKVKTIYKDRIVEKAKAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0181350_10988791	3300017716	Freshwater Lake	TLDSIPVIINNDIIWEKFITTKDTIIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAQAKATRPRANGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0181365_10724732	3300017736	Freshwater Lake	VYVPKTRQEKRIEYKLKVKTIYKDRIVEKAKAKASQPRPRGNLSLLFVGVGIGLLLSYLFKFVKDKYLL
Ga0181365_11599361	3300017736	Freshwater Lake	MSVDSVPIIINDTIVWEKFITTKDTIIKYNTVYVPKTRLEKRLAYKLKVKTIYKDRIVKKAQAKATRPRPRGNLSLLFVGVGIGLLLSYLFKFAR
Ga0181365_11706412	3300017736	Freshwater Lake	TVYVPKTRLDKRIEYKIQVKTIYKDRLVYKYKYRAEGQKLKSEVKIAKTQRPRPNGNLSLLFVGVGIGLLLSYLFKFARQRYMF
Ga0181358_11381961	3300017774	Freshwater Lake	GDTIRITTLDSIPVIINNDIIWEKFITTKDTIIKYNTVYVPKTRQDKRIEYRLKVKTIYKDRIVEKAKAKASQPRPRGNLSLLFVGVGIGLLLSYLFKFVKDKYLL
Ga0188851_10156222	3300018682	Freshwater Lake	PIIQYKTVYVPKTRLDKRIEYRLKVKTIYKDRIVEKAKAKATKPKTRGNLNLLFVGVGIGLLLSYLLKFAKEKYSL
Ga0181359_11121152	3300019784	Freshwater Lake	VPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0181359_11680971	3300019784	Freshwater Lake	NSIPVIINNDIVWEKIISTKDTIIKYRKVYTPLTRQDKRLQYKIQVKTIYKDRLVYKYKYRAEGQKAKSEVKKVKAQRPRPRGNLNLLFVGVGIGLLLSYLFKFARQRYMF
Ga0211736_101351471	3300020151	Freshwater	DKRLQYKIQIKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLLKFAREKYL
Ga0211736_108032312	3300020151	Freshwater	YRTTYVPRTRFQERLSYKLKVKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFAREKYLF
Ga0211731_104917261	3300020205	Freshwater	RTVYTPLTRQDKRIQYKLKVKTIYKDRIVEKAQAKATRPRANGNLSLLFVGVGIGLLLSYLFKFARERYLF
Ga0207938_10326061	3300020525	Freshwater	IIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAQAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0222714_103142971	3300021961	Estuarine Water	TYVPRTRYQERLAYKLKVKTIYKDRIVQKAQAKATRPRARGNLNLLFVGVGIGLLLSYLFKFAREKYLW
Ga0222713_105288131	3300021962	Estuarine Water	ELKREYKLKVKTIYKDRIVEKAKAKATQPRPKGNLSLLFVGVGIGLLLSYLFKFAREKYL
Ga0222712_101480514	3300021963	Estuarine Water	VPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATQPRPRGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0196901_11608242	3300022200	Aqueous	VYVPKTKIELKREFKLKIKTIYKDRIVQKAQAKATRPRTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0210003_13850262	3300024262	Deep Subsurface	PKTRQDKRIEYRLKVKTIYKDRIVEKAKAKATKPKTRGNLNLLFVGVAIGLLLSYLLKFAREKYSL
Ga0244776_106306132	3300024348	Estuarine	IIKYNTVYVPKTRLDKRIEYRLKVKTIYKDRIVEKAKAKATRPRARGNLSLLFVGVGIGLLLSYLFKFARQRYMF
Ga0208439_11026262	3300027278	Estuarine	KRIEYKLKVKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFAREKYLW
Ga0209867_10211492	3300027393	Sand	YNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATQPRPRGNLNLLFVGVGIGLLLSYLFKFARERYLF
Ga0208974_11606612	3300027608	Freshwater Lentic	KDTIIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAQAKASQPRPRGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0208951_10664851	3300027621	Freshwater Lentic	YKTTYVPRTRYQERLAYKLKIKTIYKDRIVEKAQAKATRPRPRGNLSLLFVGVGIGLLLSYLFKFAREKYLW
Ga0208942_11848182	3300027627	Freshwater Lentic	VPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFARERYLF
Ga0208133_10368402	3300027631	Estuarine	PVIINNDIIWEKFITTKDTIIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATRPRTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0209357_10781582	3300027656	Freshwater Lake	IVWEKFITTKDTIIKYRTTYVPRTRYQERLAYKLKVKTIYKDRIVEKAKAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0209553_12101222	3300027688	Freshwater Lake	PVIIHDSIVWEKFITTKDTIIKYKTTYVPRTRYQERLAYKLKVKTIYKDRIVEKAQAKATRPRTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0209553_12512541	3300027688	Freshwater Lake	IIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFARERYLF
Ga0209442_12000112	3300027732	Freshwater Lake	CEETGDTIRIMSVDSIPIIINDTIVWEKFITTKDTIIKYRTTYVPRTRYQEKLAYKLKVKTIYKDRIVKKAQAKATRPRPRGNLSLLFVGVGIGLLLSYLFKFAREKYLW
Ga0209088_101916882	3300027763	Freshwater Lake	FITTKDTIIKYRTTYVPRTRYQERLAYKLKVKTIYKDRIVEKAQAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFTKDKYLL
Ga0209768_102049752	3300027772	Freshwater Lake	EKFITTKDTIIKYKTTYVPRTRYQERLAYKLKVKTIYKDRIVEKAKAKATRPRPRGNLSLLFVGVGIGLLLSYLFKFVREKYLF
Ga0209246_104151042	3300027785	Freshwater Lake	IIINKTIVWEKFITTKDTIIKYRTTYVPRTRYQEKLAYKLKVKTIYKDRIVKKAQAKATRPRPRGNLSLLFVGVGIGLLLSYLFKFAR
Ga0209353_102081042	3300027798	Freshwater Lake	WEKFITTKDTIIKYKTTYVPRTRYQERLAYKLKIKTIYKDRIVEKAQAKATRPRPRGNLSLLFVGVGIGLLLSYLFKFAREKYLW
Ga0209354_104405541	3300027808	Freshwater Lake	INDTIVWEKFITTKDTIIKYRTTYVPRTRYQEKLAYKLKVKTIYKDRIVKKAQAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAR
Ga0307380_102190205	3300031539	Soil	RDSIVWEKFITTKDTIIQYKTVYVPKTRLDKRIEYRLKVKTIYKDRIVEKAKAKATKPKTRGNLNLLFVGVGIGLLLSYLLKFAREKYSL
Ga0307379_102404781	3300031565	Soil	RDSIVWEKFITTKDTIIQYKTVYVPKTRLDKRIEYRLKVKTIYKDRIVEKAKAEATKPKTRGNLNLLFVGVGIGLLLSYLLKFAREKYSL
Ga0307379_103698393	3300031565	Soil	DSIPVIINNEIIYEKFISTKDTIIKYRTVYTPLTRQDKRIQYKLKVKTIYKDRIVEKAKAKATRPKTRGNLNLLFVGVGIGLLLSYLLKFAREKYSL
Ga0307378_103048694	3300031566	Soil	DKRIEYRLKVKTIYKDRIVEKAQAKATRPKTRGNLNLLFVGVGIGLLLSYLLKFAREKYS
Ga0315291_105425711	3300031707	Sediment	EETGYTIRITTLDSIPVIINNDIIWEKFITTKDTIIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATQPRPNGNLSLLFVGVGIGLLLSYLFKFARERYMF
Ga0315291_113600032	3300031707	Sediment	TRLDKKIEYRLKVKTIYKDRIVEKAQAKATRPRANGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0315909_108948872	3300031857	Freshwater	WEKFITTKDTIIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVQKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFAREKYLF
Ga0315285_107762181	3300031885	Sediment	KIINTKDTIIKYNTVYVPKTRLDKRIEYKIQVKTIYKDRLVYKYKYRAEGQKAKSEVKKAKAERPRPNGNLSLLFVGVGIGLLLSYLFKFARERYMF
Ga0315274_119392522	3300031999	Sediment	PKTRLDKKIEYRLKVKTIYKDRIVEKAQAKATRPRANGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0315289_104364561	3300032046	Sediment	DTIRITTLDSIPVIINNDIIWEKFITTKDTIIKYRTTYVPKTRLDKRIEYKLKIKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFAREKYLF
Ga0315284_115643271	3300032053	Sediment	KRIEYRLKVKTIYKDRIVEKAKAKATRPRTRGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0315284_119283412	3300032053	Sediment	TVYVPKTRQDKRIEYKIKVKTIYKDRVVEKAQAKAEVQKAKAERPKGRGNLNLLFVGVGIGLLLSYLFKFARERYLF
Ga0315292_111998562	3300032143	Sediment	YVPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATQPRPRGNLSLLFVGVGIGLLLSYLFKFAREKYMF
Ga0315295_112093301	3300032156	Sediment	RITTLDSIPVIINNDIIWEKFITTKDTIIKYRTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATQPRPRGNLSLLFVGVGIGLLLSYLFKFAREKYMF
Ga0315295_114752091	3300032156	Sediment	TTKDTIIKYRTTYVPKTKIELKREFKLKIKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFAREKYLF
Ga0315268_110431842	3300032173	Sediment	LDSIPIIINDTIVWEKFITTKDTIIKYRTTYVPKTKIELKREFKLKIKTIYKDRIVEKAQAKATRPRARGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0315286_111607421	3300032342	Sediment	IIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATQPRPRGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0315275_126468632	3300032401	Sediment	VPKTKIELKREFKLKIKTIYKDRIVEKAQAKATRPRARGNLSLLFVGVGIGLLLSYLFKFAREKYLF
Ga0334722_106875232	3300033233	Sediment	YNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAKAKATQPRPNGNLSLLFVGVGIGLLLSYLFKFARERYMF
Ga0335003_0123380_3_230	3300033995	Freshwater	IIKYNTVYVPKTRLDKRIEYRLKVKTIYKDRIVEKAQAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAREKYLW
Ga0335000_0164894_1_243	3300034063	Freshwater	TTKDTIIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVQKAQAKATRPRANGNLSLLFVGVGIGLLLSYLFKFAKDKVLF
Ga0335028_0585799_37_297	3300034071	Freshwater	VWEKFITTKDTIIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVQKAQAKATRPRANGNLSLLFVGVGIGLLLSYLFKFAKDKVLF
Ga0335029_0717636_2_301	3300034102	Freshwater	TLDSIPVIINNDIIWEKFITTKDTIIKYKTTYVPRTRYQERLAYKLKVKTIYKDRIVEKAKAKATRPRARGNLSLLFVGVGIGLLLSYLLKFAREKYLF
Ga0335048_0269732_710_898	3300034356	Freshwater	LDKKIEYRLKVKTIYKDRIVEKAQAKATRPKTRGNLSLLFVGVGIGLLLSYLFKFAREKYLW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102554

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences