NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F102542

Metagenome Family F102542

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F102542
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 38 residues
Representative Sequence HPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT
Number of Associated Samples 14
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 11
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont
(95.049 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.44%    β-sheet: 0.00%    Coil/Unstructured: 51.56%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Marine Gutless Worms SymbiontHost-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont95.05%
Marine Gutless WormsHost-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms3.96%
Marine Gutless Worms SymbiontHost-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003772Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus exumae BAHAMAS.2Host-AssociatedOpen in IMG/M
3300005652Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1Host-AssociatedOpen in IMG/M
3300005653Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1Host-AssociatedOpen in IMG/M
3300005970Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.2Host-AssociatedOpen in IMG/M
3300005999Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.2Host-AssociatedOpen in IMG/M
3300007818Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.2Host-AssociatedOpen in IMG/M
3300008215Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.1Host-AssociatedOpen in IMG/M
3300010290Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 2 OAHU.JWI-54 metaGHost-AssociatedOpen in IMG/M
3300010292Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 1 OAHU.JWI-67 metaGHost-AssociatedOpen in IMG/M
3300010295Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 2 OAHU.JWI-49 metaGHost-AssociatedOpen in IMG/M
3300010315Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 1 OAHU.JWI-70 metaGHost-AssociatedOpen in IMG/M
3300027001Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027658Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027661Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0049094_1000604813300003772Marine Gutless Worms SymbiontLKLNDYPSPSYSVVSADTLRDLVTLTFDLLTLDSGQTWQVTSTKF
Ga0056135_1011875823300005652Marine Gutless Worms SymbiontMVSYSVLAADMFRDFVTLTFDLLTLVSGHTCRVTL*
Ga0056135_1015759743300005652Marine Gutless Worms SymbiontYDHPLPRYSVIAADTLRDLVTLTFDLLTLLSGHTWRVTW*
Ga0056135_1019650333300005652Marine Gutless Worms SymbiontDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTWSTGV*
Ga0056135_1027614523300005652Marine Gutless Worms SymbiontHPLPRYSVIAADTLRDLVTLTFDLLTFFSGHTWRVT*
Ga0056135_1045078033300005652Marine Gutless Worms SymbiontMPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTWSTPAP
Ga0056135_1046228213300005652Marine Gutless Worms SymbiontLPSYIVIAADTLRDIVTLTFDLLTLVSGHTWRVTWSTPPPSL
Ga0056135_1049434223300005652Marine Gutless Worms SymbiontHPLPRYSVIAADTLRDLVTLTFDLLTLVSDHTWLVR*
Ga0056135_1050592513300005652Marine Gutless Worms SymbiontLKLIDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHT*
Ga0056135_1050953913300005652Marine Gutless Worms SymbiontLPRYTVIAADTLRDLVTLTFDLLTLVSGHTWRVTW
Ga0056135_1055374923300005652Marine Gutless Worms SymbiontDHPLPSYSVIAADTLRDLVTLTFDLLTLVSGHTWRVK*
Ga0056133_1008614113300005653Marine Gutless Worms SymbiontMPRYSVIAADTLRDLVTLTFDLLTLVSGYTRRVT*
Ga0056133_1018565813300005653Marine Gutless Worms SymbiontDHPLPSYSVIAADTLRDLVTLTFDLLTLVSGHTWQVT*
Ga0056133_1028051713300005653Marine Gutless Worms SymbiontLPRYSVIAADTLRDLVILTFDLLTLVSGHTWRVTWST
Ga0056133_1035730123300005653Marine Gutless Worms SymbiontMTVSTKLKLIDHPLPRYSVIAADTLRDLVTLTFDLLTLVS
Ga0056133_1040789723300005653Marine Gutless Worms SymbiontYDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT*
Ga0056133_1045098423300005653Marine Gutless Worms SymbiontPLPRYSVIAADTLRDLVTLTFDLLTLVSGRTWRVM*
Ga0056133_1046054113300005653Marine Gutless Worms SymbiontPRYSVIAADTLRDLVTLTFDLLTLVSGHTCRVTC*
Ga0056133_1051862323300005653Marine Gutless Worms SymbiontDHPLPRNSVIAADTLRDLVTLTFDLLTLVSGHTWRIM*
Ga0056133_1052441613300005653Marine Gutless Worms SymbiontYDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGRTWRVT*
Ga0056133_1054407023300005653Marine Gutless Worms SymbiontDYPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT*
Ga0056133_1056053613300005653Marine Gutless Worms SymbiontLPRYSVIAADTLRDLVTLTFDLLTLVSGHTRRVT*
Ga0056133_1057149723300005653Marine Gutless Worms SymbiontYDHPMPRYSVIAADTLRDIATLTFDLLTLVICHTWRVTL*
Ga0056133_1058001923300005653Marine Gutless Worms SymbiontYDYPLPSYSVIAADTLRDLVTLTFDLLTLVSGHTWRVK*
Ga0056133_1058491013300005653Marine Gutless Worms SymbiontMPRYSVIAADTLRDIVTLTFDLLTLVSGHTWRVTW
Ga0056133_1059353613300005653Marine Gutless Worms SymbiontYDHPMPRYSVIAADTLRELVTLTFDLLTLVSGHTWRVT*
Ga0056134_1001792713300005970Marine Gutless Worms SymbiontLPSYSLIAADTLRDLVTLTFDLLTLVSGHTWRVTWST
Ga0056134_1017964823300005970Marine Gutless Worms SymbiontYDHPMPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTVRVD*
Ga0056134_1018328913300005970Marine Gutless Worms SymbiontLPSYSVIAADTLRDLVTLTFDLLTLFSGHTWLVT*
Ga0056134_1022114023300005970Marine Gutless Worms SymbiontHPLPRYSVIAADTLRDLVTLTYDLLTLVSGHTWRVT*
Ga0056134_1023452013300005970Marine Gutless Worms SymbiontDHPLPRYSVIAADTLRDLVTLTFDLLTLVSDHTWRVTW*
Ga0056134_1034395423300005970Marine Gutless Worms SymbiontLTSYSVIAADTLRELVILTFDLLTLVIGHTWRVTWS
Ga0056134_1037046513300005970Marine Gutless Worms SymbiontLPSYNVIAADTLRDLVTLTFDLLTLVSGHTRRVTWS
Ga0056134_1037960713300005970Marine Gutless Worms SymbiontPLPRYSVIAADTLRDLVTLTSHLLTLVSGHTWRVMWSTPHEV*
Ga0056134_1039294113300005970Marine Gutless Worms SymbiontDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTCRVT*
Ga0056134_1039367913300005970Marine Gutless Worms SymbiontHPLPRYSVIAADTLRDLVTLTFDLLTLFSGRTWRVT*
Ga0056134_1043425713300005970Marine Gutless Worms SymbiontHPLPRYSVIAADTLRYLVTLTFDLLTLVSGYTWRIT*
Ga0056134_1044880413300005970Marine Gutless Worms SymbiontLKLIDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGRTWRVT*
Ga0056134_1046047313300005970Marine Gutless Worms SymbiontMPRYSVIAADTLRDLVTFDLLTLVSGHTWRVTWSTPPPSL
Ga0056134_1047012213300005970Marine Gutless Worms SymbiontLPRYSVIAADTLRDLVTLTFDLLTLVSGHTGGSRDQP
Ga0056134_1047619613300005970Marine Gutless Worms SymbiontSYGHPLPSYSVIAADTLRDLVTLTFDLLTLVSGHTWR*
Ga0056134_1049457923300005970Marine Gutless Worms SymbiontMPRYSVIATDTLRDLVTLTFDLLTLVSGHTWRVTW
Ga0056136_102060313300005999Marine Gutless Worms SymbiontDHPLPRYCVIAADTLRDLVTLTFDLLTLVSGHTWRVT*
Ga0056136_102732213300005999Marine Gutless Worms SymbiontHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWQVT*
Ga0056136_104371523300005999Marine Gutless Worms SymbiontPLPSYSVIAADTLRDLVTLTFDLLTLVSGPTWRVT*
Ga0056136_105433223300005999Marine Gutless Worms SymbiontMPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTCSTPPP
Ga0056109_101679213300007818Marine Gutless Worms SymbiontYDHPLPSYSVIAADTLRDLVTLSFDLLTLVSDHTWRVT*
Ga0056109_113664623300007818Marine Gutless Worms SymbiontDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT*
Ga0056108_103686723300008215Marine Gutless Worms SymbiontDHPLPRYSVIAADTLRDLVTLTFDLLTLVNGHTWQVTWSSQLQQLK*
Ga0056108_116966113300008215Marine Gutless Worms SymbiontHPLPSYSFIAADTLRDLVTLTFDLLTLFSGHTWRVT*
Ga0056108_125061913300008215Marine Gutless Worms SymbiontDHPLPSYSVIAGDTLRDLVTLSFDILTLVSGHTWRAT*
Ga0056108_129154813300008215Marine Gutless Worms SymbiontPLPSYSVIAADTLRDLVTLTFNLLTLVSGNTAIRS*
Ga0056108_141239313300008215Marine Gutless Worms SymbiontHPLPRYSVIAADTLRDLATLTFDLLTLVSGRTWRVM*
Ga0056108_142317413300008215Marine Gutless Worms SymbiontLPRYSVIAADTLRDLVTLTFDLLTLFSGHTWRVT*
Ga0056108_143798613300008215Marine Gutless Worms SymbiontMPRYSVIAADTLRDIVTLTFDLLTLVSGHTWRVT*
Ga0056108_143837513300008215Marine Gutless Worms SymbiontPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTCRVTW*
Ga0056108_145313213300008215Marine Gutless Worms SymbiontPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWQVT*
Ga0056108_146393223300008215Marine Gutless Worms SymbiontMPRYSVIAADTLRDLVTLTFHLLTLVSGHTWRVTWSTPP
Ga0056108_149985413300008215Marine Gutless Worms SymbiontDHPLPRYSVIATDTLRDLVTLTFDLLTLVSGRTWRVT*
Ga0056108_150028723300008215Marine Gutless Worms SymbiontYDHPLPSYTVIAADTLRDLVTLTFDLLTLVSGHTWRVT*
Ga0056108_150516113300008215Marine Gutless Worms SymbiontDHLMPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTWSTPHEV*
Ga0056108_153079223300008215Marine Gutless Worms SymbiontYDHPLPRYSVIAADTLRDLVTLTFHLLTLVSGHTWRVT*
Ga0056108_153278023300008215Marine Gutless Worms SymbiontMPRYSIIAADTLRDLVTLTFDLLTLVSGHTWRVTWSTPQ
Ga0056108_153656713300008215Marine Gutless Worms SymbiontHLLPSYSVIAADTLRDLVTLTFDLLTLVSAHTWRVM*
Ga0056108_153776813300008215Marine Gutless Worms SymbiontHPLPSNSVIAADTLRDLVTSTFDLLTLVSGHTWRVT*
Ga0056108_154239723300008215Marine Gutless Worms SymbiontHPLPRYSVIAADKLRDLVTLTFDLLTLVSGHTWRVR*
Ga0056108_154925413300008215Marine Gutless Worms SymbiontPLPNYSVIAVDRLRDLVTLTFDLLTLVSGHTWRVTGQSLHQV*
Ga0056108_155682013300008215Marine Gutless Worms SymbiontHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT*
Ga0056108_155992913300008215Marine Gutless Worms SymbiontLPRYSVIAADTLGDLVTLTFDLLTLVSGHTWRVT*
Ga0056108_156126213300008215Marine Gutless Worms SymbiontMPRYSVIAADTFRDLVTLTFDLLTLVSGHTWRVTWSTPPPSLK
Ga0126333_122778813300010290Marine Gutless WormsMIIHCRVNVLSDDTLRDLVTLTFDLLTLNSCHTWR
Ga0126326_130659513300010292Marine Gutless WormsPLPSYSVLAADTLRDLVTLTFDLLTLSSCPAWRVT*
Ga0126334_1027133913300010295Marine Gutless WormsLSSYSVLAADTLRDLVTLTFDLLTLKSCHTRRVT*
Ga0136654_134873413300010315Marine Gutless WormsGHPLPSYSVLAADTLRDLVTLTFDLLTLSSCPAWRVT*
Ga0209790_102584213300027001Marine Gutless Worms SymbiontPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT
Ga0209259_111006233300027658Marine Gutless Worms SymbiontPMPRYSVMADDTLRDLVTLTFDLLTLVSGRTWRVT
Ga0209259_111688013300027658Marine Gutless Worms SymbiontDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT
Ga0209259_115758213300027658Marine Gutless Worms SymbiontMPRYSVIAADTLRDLVTFDLLTLVSGHTWRVTWSTRPPSLKV
Ga0209259_119148113300027658Marine Gutless Worms SymbiontYDHPLPRYSVIAADTLRDLVTLTFDLLTLLTDHTWRVT
Ga0209259_121911913300027658Marine Gutless Worms SymbiontYDHPLPPYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT
Ga0209259_123577813300027658Marine Gutless Worms SymbiontYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTRIAVGEF
Ga0209259_124722413300027658Marine Gutless Worms SymbiontDYPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTTFECPT
Ga0209259_125155923300027658Marine Gutless Worms SymbiontDHLLPSYSVLAADTLRDLLTSTFDLLTLVSGHTWRVT
Ga0209259_126018513300027658Marine Gutless Worms SymbiontHPLPSYSVIAADTLRDLVTLTFDLLTLVSGHTWRVVVNTSTKF
Ga0209259_134499413300027658Marine Gutless Worms SymbiontLPSYSVIAADTLRDLVTLTFDLLTLDNGHTLEDPT
Ga0209259_134802313300027658Marine Gutless Worms SymbiontHPLPSYSVIAADTLLDLVTLTFDLLTLVSGHACLVT
Ga0209259_137152123300027658Marine Gutless Worms SymbiontYDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRIT
Ga0209259_140224123300027658Marine Gutless Worms SymbiontYDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVK
Ga0209259_141660313300027658Marine Gutless Worms SymbiontDNRLPRSSVIDADTLRDLVTLTFDLWTLVSGHTWRVT
Ga0209259_144023513300027658Marine Gutless Worms SymbiontPKPRYSVIAADTLRDLVTLTFDLLTLVSGYTWRVT
Ga0209259_144402613300027658Marine Gutless Worms SymbiontPMPRYSVIAADTLRDIVTLTFDLLNLVSGHTWRVM
Ga0209459_1000321113300027661Marine Gutless Worms SymbiontPSYSVIADDTLRDLVTLTFDLLTLVSGHTWRVTWSIPLHQV
Ga0209459_1007113413300027661Marine Gutless Worms SymbiontLPSYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTRIAVGEF
Ga0209459_1011291533300027661Marine Gutless Worms SymbiontHPLPRYSVIAADTLRDLVTLTFDLLTLVSGRTWGSRD
Ga0209459_1020750413300027661Marine Gutless Worms SymbiontMHSYSVIAADTLRDIVTLTFDLLTLVSGRTWRVTW
Ga0209459_1026612513300027661Marine Gutless Worms SymbiontYDHPLRSYRVIAAGTSRDLVTLTFNLLTLVSGHTPYHVTYA
Ga0209459_1033186513300027661Marine Gutless Worms SymbiontYDHPMPRYSVIAADTLRDLVTLTFDLLTLFSGRTWRVT
Ga0209459_1033929123300027661Marine Gutless Worms SymbiontHPLPRYSVIAADTLRDLVTLTFDLLTLVSDHTWLVR
Ga0209459_1033932913300027661Marine Gutless Worms SymbiontLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRGTWSTPPPS
Ga0209459_1041877413300027661Marine Gutless Worms SymbiontYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTWQPLH
Ga0209459_1043326523300027661Marine Gutless Worms SymbiontPLPRYSVIAADTLRDLVILTFDLLTLVSGRTWRVT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.