Metagenome / Metatranscriptome Family F102521

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102521
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	37 residues
Representative Sequence	MAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYP
Number of Associated Samples	7
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	16.33 %
% of genes near scaffold ends (potentially truncated)	67.33 %
% of genes from short scaffolds (< 2000 bps)	64.36 %
Associated GOLD sequencing projects	7
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (77.228 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral (99.010 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal corpus (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 51.43% Coil/Unstructured: 48.57%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13012	MitMem_reg	0.99
PF13920	zf-C3HC4_3	0.99
PF03577	Peptidase_C69	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG4690	Dipeptidase	Amino acid transport and metabolism [E]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.23 %
All Organisms	root	All Organisms	22.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.23 %
cellular organisms	root	All Organisms → cellular organisms	22.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.23 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	20.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.23 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	19.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.23 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	17.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.98 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.23 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	17.82 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.98 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.23 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	14.85 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1.98 %
PX clade	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.23 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	12.87 %
Lutimaribacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Lutimaribacter	1.98 %
Xanthophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Xanthophyceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.23 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	12.87 %
unclassified Lutimaribacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Lutimaribacter → unclassified Lutimaribacter	1.98 %
Tribonematales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Xanthophyceae → Tribonematales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.23 %
Lutimaribacter sp. EGI FJ00014	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Lutimaribacter → unclassified Lutimaribacter → Lutimaribacter sp. EGI FJ00014	1.98 %
Tribonemataceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Xanthophyceae → Tribonematales → Tribonemataceae	0.99 %
Symbiodinium natans	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium natans	0.99 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.23 %
Lutimaribacter sp. EGI FJ00014	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Lutimaribacter → unclassified Lutimaribacter → Lutimaribacter sp. EGI FJ00014	1.98 %
Tribonema	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Xanthophyceae → Tribonematales → Tribonemataceae → Tribonema	0.99 %
Symbiodinium natans	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium natans	0.99 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.23 %
Lutimaribacter sp. EGI FJ00014	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Lutimaribacter → unclassified Lutimaribacter → Lutimaribacter sp. EGI FJ00014	1.98 %
Tribonema minus	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Xanthophyceae → Tribonematales → Tribonemataceae → Tribonema → Tribonema minus	0.99 %
Symbiodinium natans	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium natans	0.99 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300008041\|Ga0099806_1601718	Not Available	503	Open in IMG/M
3300008042\|Ga0100406_1002711	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	740	Open in IMG/M
3300008044\|Ga0099804_1035739	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1187	Open in IMG/M
3300010030\|Ga0126338_10161338	Not Available	892	Open in IMG/M
3300010030\|Ga0126338_10225624	Not Available	689	Open in IMG/M
3300010034\|Ga0126342_10000012	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	78331	Open in IMG/M
3300010034\|Ga0126342_10000129	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	54630	Open in IMG/M
3300010034\|Ga0126342_10000316	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	47695	Open in IMG/M
3300010034\|Ga0126342_10001225	Not Available	34900	Open in IMG/M
3300010034\|Ga0126342_10002073	All Organisms → cellular organisms → Eukaryota	30360	Open in IMG/M
3300010034\|Ga0126342_10002232	Not Available	29689	Open in IMG/M
3300010034\|Ga0126342_10002365	All Organisms → cellular organisms → Eukaryota → Sar	29263	Open in IMG/M
3300010034\|Ga0126342_10002439	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	29006	Open in IMG/M
3300010034\|Ga0126342_10002919	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	27525	Open in IMG/M
3300010034\|Ga0126342_10003200	Not Available	26785	Open in IMG/M
3300010034\|Ga0126342_10006068	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	21321	Open in IMG/M
3300010034\|Ga0126342_10006848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Lutimaribacter → unclassified Lutimaribacter → Lutimaribacter sp. EGI FJ00014	20282	Open in IMG/M
3300010034\|Ga0126342_10008064	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	18840	Open in IMG/M
3300010034\|Ga0126342_10009711	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	17238	Open in IMG/M
3300010034\|Ga0126342_10010994	Not Available	16176	Open in IMG/M
3300010034\|Ga0126342_10011889	Not Available	15545	Open in IMG/M
3300010034\|Ga0126342_10012356	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	15226	Open in IMG/M
3300010034\|Ga0126342_10014406	Not Available	13968	Open in IMG/M
3300010034\|Ga0126342_10015346	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	13435	Open in IMG/M
3300010034\|Ga0126342_10016903	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	12668	Open in IMG/M
3300010034\|Ga0126342_10017260	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	12499	Open in IMG/M
3300010034\|Ga0126342_10018030	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	12139	Open in IMG/M
3300010034\|Ga0126342_10020869	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	10974	Open in IMG/M
3300010034\|Ga0126342_10025138	Not Available	9562	Open in IMG/M
3300010034\|Ga0126342_10025978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Lutimaribacter → unclassified Lutimaribacter → Lutimaribacter sp. EGI FJ00014	9318	Open in IMG/M
3300010034\|Ga0126342_10033758	Not Available	7491	Open in IMG/M
3300010034\|Ga0126342_10036288	Not Available	7003	Open in IMG/M
3300010034\|Ga0126342_10039726	Not Available	6368	Open in IMG/M
3300010034\|Ga0126342_10040816	Not Available	6177	Open in IMG/M
3300010034\|Ga0126342_10042679	Not Available	5871	Open in IMG/M
3300010034\|Ga0126342_10078221	Not Available	2725	Open in IMG/M
3300010034\|Ga0126342_10080778	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium natans	2624	Open in IMG/M
3300010034\|Ga0126342_10084806	Not Available	2482	Open in IMG/M
3300010035\|Ga0126343_10111413	Not Available	1949	Open in IMG/M
3300010035\|Ga0126343_10127414	Not Available	1809	Open in IMG/M
3300010035\|Ga0126343_10139464	Not Available	1723	Open in IMG/M
3300010035\|Ga0126343_10141747	Not Available	1707	Open in IMG/M
3300010035\|Ga0126343_10145275	Not Available	1684	Open in IMG/M
3300010035\|Ga0126343_10172883	Not Available	1530	Open in IMG/M
3300010035\|Ga0126343_10231656	Not Available	1297	Open in IMG/M
3300010035\|Ga0126343_10245632	Not Available	1253	Open in IMG/M
3300010035\|Ga0126343_10317520	Not Available	1077	Open in IMG/M
3300010035\|Ga0126343_10337970	Not Available	1037	Open in IMG/M
3300010035\|Ga0126343_10347808	Not Available	1020	Open in IMG/M
3300010035\|Ga0126343_10360571	Not Available	997	Open in IMG/M
3300010035\|Ga0126343_10362792	Not Available	993	Open in IMG/M
3300010035\|Ga0126343_10380659	Not Available	964	Open in IMG/M
3300010035\|Ga0126343_10381115	Not Available	963	Open in IMG/M
3300010035\|Ga0126343_10402551	Not Available	931	Open in IMG/M
3300010035\|Ga0126343_10403004	Not Available	930	Open in IMG/M
3300010035\|Ga0126343_10408515	Not Available	922	Open in IMG/M
3300010035\|Ga0126343_10444538	Not Available	874	Open in IMG/M
3300010035\|Ga0126343_10450084	Not Available	868	Open in IMG/M
3300010035\|Ga0126343_10450309	Not Available	868	Open in IMG/M
3300010035\|Ga0126343_10453603	Not Available	864	Open in IMG/M
3300010035\|Ga0126343_10461554	Not Available	854	Open in IMG/M
3300010035\|Ga0126343_10466603	Not Available	848	Open in IMG/M
3300010035\|Ga0126343_10476166	Not Available	837	Open in IMG/M
3300010035\|Ga0126343_10478652	Not Available	834	Open in IMG/M
3300010035\|Ga0126343_10501283	Not Available	810	Open in IMG/M
3300010035\|Ga0126343_10508011	Not Available	803	Open in IMG/M
3300010035\|Ga0126343_10520569	Not Available	790	Open in IMG/M
3300010035\|Ga0126343_10525015	Not Available	786	Open in IMG/M
3300010035\|Ga0126343_10527488	Not Available	783	Open in IMG/M
3300010035\|Ga0126343_10533757	Not Available	777	Open in IMG/M
3300010035\|Ga0126343_10551685	Not Available	761	Open in IMG/M
3300010035\|Ga0126343_10553011	Not Available	759	Open in IMG/M
3300010035\|Ga0126343_10561101	Not Available	752	Open in IMG/M
3300010035\|Ga0126343_10569473	Not Available	745	Open in IMG/M
3300010035\|Ga0126343_10580580	Not Available	735	Open in IMG/M
3300010035\|Ga0126343_10586995	Not Available	730	Open in IMG/M
3300010035\|Ga0126343_10606679	Not Available	714	Open in IMG/M
3300010035\|Ga0126343_10625827	Not Available	699	Open in IMG/M
3300010035\|Ga0126343_10638584	Not Available	689	Open in IMG/M
3300010035\|Ga0126343_10640835	Not Available	688	Open in IMG/M
3300010035\|Ga0126343_10656412	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	677	Open in IMG/M
3300010035\|Ga0126343_10696326	Not Available	650	Open in IMG/M
3300010035\|Ga0126343_10724209	Not Available	633	Open in IMG/M
3300010035\|Ga0126343_10726428	Not Available	631	Open in IMG/M
3300010035\|Ga0126343_10730937	Not Available	629	Open in IMG/M
3300010035\|Ga0126343_10759416	Not Available	612	Open in IMG/M
3300010035\|Ga0126343_10774875	Not Available	604	Open in IMG/M
3300010035\|Ga0126343_10790350	Not Available	596	Open in IMG/M
3300010035\|Ga0126343_10801750	Not Available	590	Open in IMG/M
3300010035\|Ga0126343_10809812	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Xanthophyceae → Tribonematales → Tribonemataceae → Tribonema → Tribonema minus	586	Open in IMG/M
3300010035\|Ga0126343_10844309	Not Available	569	Open in IMG/M
3300010035\|Ga0126343_10856655	Not Available	563	Open in IMG/M
3300010035\|Ga0126343_10862874	Not Available	560	Open in IMG/M
3300010035\|Ga0126343_10873784	Not Available	555	Open in IMG/M
3300010035\|Ga0126343_10946072	Not Available	525	Open in IMG/M
3300010035\|Ga0126343_10979445	Not Available	512	Open in IMG/M
3300010035\|Ga0126343_10985825	Not Available	510	Open in IMG/M
3300014041\|Ga0116707_1035479	Not Available	622	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Invertebrates	Host-Associated → Invertebrates	100.00%

Habitat	Taxonomy	Distribution
Cnidaria	Host-Associated → Invertebrates → Cnidaria	100.00%

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	99.01%
Coral Tissue	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral Tissue	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300008041	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008042	Coral microbial communities from Puerto Morelos, Mexico - Orbicella 8 C C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008044	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300010030	Coral microbial communities from Petempiche,Puerto Morelos, Mexico - Orbicella C C metagenome	Host-Associated	Open in IMG/M
3300010034	Coral microbial communities from Lord Howe Island, Old Settlement Bay, Australia - Cyphastrea 1 metagenome	Host-Associated	Open in IMG/M
3300010035	Coral microbial communities from Lord Howe Island, Old Settlement Bay, Australia - Cyphastrea 2 metagenome	Host-Associated	Open in IMG/M
3300014041	Coral microbial communities from a home aquarium in Belgium - PD-TF-control B	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0099806_16017181	3300008041	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYP
Ga0100406_10027112	3300008042	Coral	AVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPNINKASN*
Ga0099804_10357392	3300008044	Coral	YMAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDP*
Ga0126338_101613381	3300010030	Coral	QNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYIFQNGKQ*
Ga0126338_102256241	3300010030	Coral	KTLVPLVNPKIAGKWMFIPLKMVLIGIDPYPYVE*
Ga0126342_1000001236	3300010034	Coral	MAVGQNLVPLVNIKIAGKWMFIPLKMALIGIDPYPYE*
Ga0126342_1000012941	3300010034	Coral	MGMGQNLVPLVNPKIAGKWMFIPLKMVLIGIDPYPYGK*
Ga0126342_1000031633	3300010034	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKMVKMVLIGIDPYPHEA*
Ga0126342_1000122538	3300010034	Coral	MGMSQNLGTLVKPKIAGKWMFIAQKMVLIGIDIDS*
Ga0126342_1000207331	3300010034	Coral	MAVCQNLVTLVNIKIAGKWMFIPLKMVIGIDPYPNEVI*
Ga0126342_1000223210	3300010034	Coral	MGMGQNPGTPVVHIKIAGKWMFIPLKMVLIGIDPYPYL*
Ga0126342_1000236515	3300010034	Coral	MGQNPIPLVNIKIAGKWMFIPLKMVSIGIDPYPYPFDVTVRL*
Ga0126342_1000243932	3300010034	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYI
Ga0126342_1000291923	3300010034	Coral	MGMGQNPVPLVNPKIAGKWMFIPLKMVLIGIDPYPI*
Ga0126342_1000320018	3300010034	Coral	MVYDMAVGQNLVPLVNIKIAGKWMFIPLKMVLIGIDS*
Ga0126342_1000606830	3300010034	Coral	MGMGQNPLPLVNIKMNIKIAGKWMFIPLKMVLIGIDP*
Ga0126342_1000684817	3300010034	Coral	MVAACQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPGGL*
Ga0126342_1000806423	3300010034	Coral	MGMGQNHVALVNIKIAGKWMFIPLKMVLIGIDPYPY*
Ga0126342_1000971115	3300010034	Coral	MKNKKSDMAVGQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYP*
Ga0126342_1001099413	3300010034	Coral	MGMGQNHVALVNIKIAGKWMFIPLKMVLIGIDPYPNE*
Ga0126342_100118899	3300010034	Coral	MAVCQNLVPRTPVVHIKIAGKWMFIPLKMVLIGIDPYHVNTLW*
Ga0126342_100123565	3300010034	Coral	MDQEMAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDP*
Ga0126342_1001440610	3300010034	Coral	MAVCQNLVPLVDIKIAGKWMFIPLKMVLIRIDPYPYL*
Ga0126342_1001534613	3300010034	Coral	MDDMAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYS*
Ga0126342_100169033	3300010034	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYIAAE*
Ga0126342_100172602	3300010034	Coral	MAVGQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYKNTHPIIP*
Ga0126342_100180301	3300010034	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYKYT*
Ga0126342_100208691	3300010034	Coral	YIYMGMGQNPIPLVNIKIAGKWMFIPLKMVCIGIDP*
Ga0126342_100251384	3300010034	Coral	MGMGQNPVPLVNLKIAGKWMFIPLKMVLIGFDPSPYDT*
Ga0126342_100259789	3300010034	Coral	MDNMGMGQNLVPLVNIKIAGKWMFIPLKMVLIGIDP*
Ga0126342_100337588	3300010034	Coral	MYMGMGQKLVPLVNLKIAGKWMFIPLKMVLIGIDP*
Ga0126342_100362883	3300010034	Coral	MGIGQNLLPLVNIKIAGKWMFIPLKMVLIGIDPYPI*
Ga0126342_100397264	3300010034	Coral	MAMGQNLVPLVNIKIAGKWMFIPLKMVLIGFDPYPYDF*
Ga0126342_100408166	3300010034	Coral	MAVGQNLVPVVNIKIAGKWMFFPLKMALIGIDPYPY*
Ga0126342_100426795	3300010034	Coral	MGQNPIPLVNIKIAGKWMFIPLKMVEIGIDPYASKT*
Ga0126342_100782216	3300010034	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIYPYPYGFIIS*
Ga0126342_100807781	3300010034	Coral	IYIYMAVCQNPIPLVNIKIAGKWMFIPLKMVLIGIDP*
Ga0126342_100848064	3300010034	Coral	MAVGHNLVPLVNIKIAGKWMFIPLKMGLIGIDPYPNEDHG*
Ga0126343_101114131	3300010035	Coral	MAVCQDLVPLVNIKIVGKWMFIPLKMVSIGIDPYPY
Ga0126343_101274141	3300010035	Coral	MAVCQNLVPLVNIKIAGKWMFPLKMVLIGIDPYPNLYPK*
Ga0126343_101394641	3300010035	Coral	YMAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYMINDG*
Ga0126343_101417471	3300010035	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYKCG
Ga0126343_101452751	3300010035	Coral	AVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYN*
Ga0126343_101728834	3300010035	Coral	QMGMGQNPIPLVNIKIAGKWMFIPLEMVCMGIDP*
Ga0126343_102316561	3300010035	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKMVCIGIDPYPYVL*
Ga0126343_102456322	3300010035	Coral	YMAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDS*
Ga0126343_103175201	3300010035	Coral	MTHGDLAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDP
Ga0126343_103379702	3300010035	Coral	CQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYNMMVIW*
Ga0126343_103478081	3300010035	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPH
Ga0126343_103605711	3300010035	Coral	MAVCQNLAPLVNIKIAGKWMFIPLKMVLIGIDPYPN
Ga0126343_103627922	3300010035	Coral	YMAVCQNLVPLVNPKIAGKWMFIPLKMVLIGIDP*
Ga0126343_103806591	3300010035	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKMVCIGIDPYPY*
Ga0126343_103811151	3300010035	Coral	LAVCQNRVPLANIKIAGKWMFIPLKMVLIGIDPYPF
Ga0126343_104025511	3300010035	Coral	VCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPNGQV*
Ga0126343_104030042	3300010035	Coral	MDVGQNPVPLVNPKIAGKWMFIPLKMVLIGIDPYP
Ga0126343_104085151	3300010035	Coral	AVCQNLVPLVNPKIAGKWMFIPLKMVLIGIEPYPYHPMGI*
Ga0126343_104445381	3300010035	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYLADL
Ga0126343_104500841	3300010035	Coral	MLPYMAVCQNLVPLVNIKIAGKWMFIPLKMVLIGI
Ga0126343_104503092	3300010035	Coral	MAVCQNRVPLVNIKIAGKWMFIPLKMVLIGIDPYPY
Ga0126343_104536031	3300010035	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPN
Ga0126343_104615541	3300010035	Coral	MAVCQNLVPLVNPKIAGKWMFIPLKMVLIGIDPYPY
Ga0126343_104666031	3300010035	Coral	QMAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPNVKV*
Ga0126343_104761661	3300010035	Coral	MAVCQNLVPLVNIKIAGIWMFIPLIMVLIGIDPSPNGF*
Ga0126343_104786524	3300010035	Coral	AVCQNLVPLVNIKITGKWMFIPLKMVLIGIDPYPYLS*
Ga0126343_105012831	3300010035	Coral	VCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYLFFCG*
Ga0126343_105080113	3300010035	Coral	CQNLVPLVNIKIAGKWMFIPPKMVLIGIDPYPYS*
Ga0126343_105205691	3300010035	Coral	NLVPLVNIKIAGKWMFIPLKMVLIGIDPYPHEST*
Ga0126343_105250152	3300010035	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYK
Ga0126343_105274881	3300010035	Coral	MAVCQNLVPLVNIKIAGKWMLIPLKMILIGIDPYPY
Ga0126343_105337572	3300010035	Coral	QMAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDP*
Ga0126343_105516851	3300010035	Coral	KNMYMAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDS*
Ga0126343_105530111	3300010035	Coral	MASSQITHLAVCQNLVPLVNLKIAGKWMFIPLKMVLIGIDPYP
Ga0126343_105611011	3300010035	Coral	YYYFIVGYVAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDP*
Ga0126343_105694731	3300010035	Coral	YMAVCQNPVPLVNIKIAGKWMFIPQKIVLIGIDS*
Ga0126343_105805801	3300010035	Coral	MAVCQNLVPLVNIKIAGKWMFIPLKVVLIGLNRY*
Ga0126343_105869951	3300010035	Coral	VCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPIHSEIP*
Ga0126343_106066791	3300010035	Coral	YMAVCQNLVPLVNIKIAGKWMFIPLKMVIIGIDP*
Ga0126343_106258271	3300010035	Coral	MAVCQNPGNLVNPKIAGKWMFIPLKMVLIGIDPYPH
Ga0126343_106261692	3300010035	Coral	LAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPSMDSKAI*
Ga0126343_106336711	3300010035	Coral	VCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYRTSNY*
Ga0126343_106385841	3300010035	Coral	YMAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYLYI*
Ga0126343_106408352	3300010035	Coral	QNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYKSC*
Ga0126343_106564122	3300010035	Coral	CHLAVGQNLVPLVNIKIAGKWMFTPLKMVLIAIDL*
Ga0126343_106963261	3300010035	Coral	CQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYLQ*
Ga0126343_107242091	3300010035	Coral	MVNHLAVCQNLVPLVNIKIAGKWMFIPLKMVLIGID
Ga0126343_107264281	3300010035	Coral	YMAVGQNLVPLVNIKIAGKWMFIPLKIVLISIDS*
Ga0126343_107309371	3300010035	Coral	IYMAVCQNLVPLVNIKIAGKWMFIPLKIVSIGIDP*
Ga0126343_107594161	3300010035	Coral	NMGMGQNPIPLVNIKIAGKWMFIPLKMVCIGIDP*
Ga0126343_107748751	3300010035	Coral	MAVCQNLVPLVKIKIAGKWMFIPLKMVLIGIDPYP
Ga0126343_107903501	3300010035	Coral	MGMGQNLVPLVNPKIAGKWMFIPLELIVIGFDPPP
Ga0126343_108017501	3300010035	Coral	MGMGQNLVPLVNPKIAGKWMFIPLKMVLIGIDPYP
Ga0126343_108098121	3300010035	Coral	PFGHMAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYSHIR*
Ga0126343_108443091	3300010035	Coral	MAVCQILVPLLNIKIAGKWMFIPLKIVLIGIDPYPY
Ga0126343_108566551	3300010035	Coral	MAVCQNLVPLVNIKIAGIWMFIPLKMVLIGIDPYPY
Ga0126343_108628742	3300010035	Coral	MAVCQNLVSLVNIKIAGKWMFIPLKMVLIGIDPYPYK
Ga0126343_108737842	3300010035	Coral	VCRGLVPLVGVTVAGKWMFIPLKMVLVGIDPYPFMLIN
Ga0126343_109460722	3300010035	Coral	MAVCQNLGPLVNIKIAGKWMFIPLKMVLIGIDPYPYE
Ga0126343_109794452	3300010035	Coral	AVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPCW*
Ga0126343_109858252	3300010035	Coral	MAVCQNLVLLVNIKIAGKWMFIPLKMVLIGIDPYP
Ga0126343_110078191	3300010035	Coral	HLAVCQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPSRIASL*
Ga0116707_10354791	3300014041	Coral Tissue	MGQNLVPLVNIKIAGKWMFIPLKMVLIGIDPYPYGFV*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102521

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences