NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metatranscriptome Family F102466

Metatranscriptome Family F102466

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F102466
Family Type Metatranscriptome
Number of Sequences 101
Average Sequence Length 64 residues
Representative Sequence LARYIYLATTIISLYKRFLIIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Number of Associated Samples 87
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 97.03 %
% of genes from short scaffolds (< 2000 bps) 98.02 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Eukaryota (97.030 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(96.040 % of family members)
Environment Ontology (ENVO) Unclassified
(97.030 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(100.000 % of family members)



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Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
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IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84
1Ga0103883_10674582
2Ga0103708_1002093621
3Ga0103878_10031101
4Ga0103879_100227211
5Ga0193488_1023932
6Ga0193230_1020171
7Ga0193230_1020972
8Ga0193079_10076911
9Ga0193339_10059481
10Ga0192914_10183691
11Ga0193467_10159721
12Ga0193467_10173462
13Ga0193467_10175422
14Ga0192906_10078041
15Ga0193013_10440631
16Ga0193108_1075591
17Ga0193263_10176583
18Ga0193481_10225061
19Ga0193481_10225541
20Ga0192917_10125451
21Ga0193264_10179411
22Ga0193264_10183711
23Ga0193110_10194721
24Ga0192920_10232742
25Ga0193209_10317011
26Ga0192904_10165912
27Ga0193529_10234021
28Ga0193387_10133881
29Ga0192938_10270682
30Ga0192902_10233911
31Ga0192931_10286312
32Ga0193058_10639821
33Ga0192827_10314902
34Ga0193478_10147402
35Ga0193478_10156942
36Ga0193472_10066551
37Ga0193197_10165641
38Ga0193298_10303681
39Ga0193298_10315272
40Ga0193095_10305572
41Ga0192928_10217242
42Ga0193357_10499881
43Ga0193117_10366372
44Ga0193283_10181322
45Ga0192824_10316851
46Ga0193281_10251271
47Ga0192854_10697641
48Ga0192861_10227362
49Ga0192829_10281471
50Ga0193497_10223231
51Ga0193526_10359112
52Ga0192927_10318332
53Ga0192933_10327141
54Ga0193363_10280721
55Ga0193413_10141742
56Ga0193199_10315252
57Ga0192835_10240662
58Ga0193276_10264801
59Ga0193176_100533852
60Ga0193176_100535682
61Ga0193262_100305862
62Ga0193096_100831261
63Ga0193096_100833801
64Ga0192818_100204782
65Ga0193265_100630782
66Ga0193266_100516372
67Ga0193010_100384671
68Ga0192892_101116991
69Ga0193567_100634991
70Ga0193567_100637893
71Ga0193560_100624142
72Ga0193480_100616252
73Ga0192930_100825891
74Ga0192930_100829061
75Ga0192930_100887691
76Ga0193559_100656482
77Ga0193554_101347781
78Ga0192932_100947161
79Ga0193518_101081941
80Ga0193280_100991791
81Ga0193514_100786081
82Ga0193345_100466322
83Ga0193345_100475822
84Ga0193527_101248802
85Ga0193361_100712771
86Ga0193525_101533812
87Ga0193094_100848961
88Ga0192860_100789101
89Ga0193555_100831692
90Ga0192857_102876122
91Ga0192998_100777081
92Ga0193189_100342531
93Ga0192826_100717622
94Ga0193356_101331911
95Ga0193208_101415502
96Ga0193208_103603752
97Ga0193155_10188192
98Ga0193499_10249073
99Ga0193453_10348631
100Ga0193239_100920712
101Ga0193564_100648942
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 72.73%    β-sheet: 0.00%    Coil/Unstructured: 27.27%
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Variant

5101520253035404550556065LARYIYLATTIISLYKRFLIIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKRExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
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Phylogeny

NCBI Taxonomy

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All Organisms
Unclassified
97.0%3.0%
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Associated Scaffolds





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Environmental Properties

Associated Habitat Types

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Marine
Surface Ocean Water
Ocean Water
96.0%3.0%
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Associated Samples


Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0103883_106745823300008835Surface Ocean WaterFFFFFKARNIYLATTIISLYKRFLTIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR*
Ga0103708_10020936213300009028Ocean WaterARYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKK*
Ga0103878_100311013300009274Surface Ocean WaterFFFFFFLARYIYLATTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR*
Ga0103879_1002272113300009276Surface Ocean WaterFFLARYIYLATTIISLYKRFLIIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR*
Ga0193488_10239323300018514MarineARYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193230_10201713300018525MarineFFFLARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKK
Ga0193230_10209723300018525MarineRYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193079_100769113300018581MarineLARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKK
Ga0193339_100594813300018605MarineLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0192914_101836913300018637MarineRNIYLATTIISLYERFLIIIGYLAGLLLLIIVSHNPDFNNQFEQFHNVICPFQKSYIVITTMIR
Ga0193467_101597213300018638MarineCVRIASQRILARYICLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNKFAQFQKVICPFQKSKIVITTMKR
Ga0193467_101734623300018638MarineTTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNKEQFQNVICPFQNFYIVITTMKR
Ga0193467_101754223300018638MarineTTIISLYKRFLRIIGYLASLLLLIIVSLNPDFNNKFEQFQKVICPFQKSNIVITTMKRLW
Ga0192906_100780413300018658MarineYIYLATTIISLYERFLRIIGYLASLLLLIIVSHNPDFNNQFEQFQKVICPFQKSNIVITTMKR
Ga0193013_104406313300018668MarineFFFLARYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193108_10755913300018669MarineTTIISLYERFLMIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193263_101765833300018680MarineLATTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNKEQFQNVICPFQNFYIVITTMKR
Ga0193481_102250613300018688MarineARYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKRLWR
Ga0193481_102255413300018688MarineARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNKFAQFQKVICPFQKSKIVITTMKR
Ga0192917_101254513300018690MarineTTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193264_101794113300018693MarineARYIYLATTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNKEQFQNVICPFQNFYIVITTMKR
Ga0193264_101837113300018693MarineATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKRLWR
Ga0193110_101947213300018696MarineFFLARYIYLATTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNQFEQFHNVICPF
Ga0192920_102327423300018708MarineLARYIYLATTIISLYKRFLIIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193209_103170113300018709MarineTTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKR
Ga0192904_101659123300018721MarineLATTIISLYKRFLIIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193529_102340213300018731MarineARYIYLATTIISLYERFLIIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193387_101338813300018740MarineATTIISLYERFLMIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0192938_102706823300018751MarineFFFKVRNIYLATTIISLYKRFLIIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0192902_102339113300018752MarineFFKARNIYLATTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0192931_102863123300018756MarineWNSRILARYIYLATTIISLYERFLIIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193058_106398213300018758MarineLARYICLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNKFAQFQKVICPFQKSKIVITTMKR
Ga0192827_103149023300018763MarineFFFFFFLARYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKK
Ga0193478_101474023300018769MarineFLARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNKFAQFQKVICPFQKSKIVITTMKR
Ga0193478_101569423300018769MarineTIISLYKGSLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKRLWR
Ga0193472_100665513300018780MarineLARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNKFAQFQKVICPFQKSKIVITTMKR
Ga0193197_101656413300018783MarineFFFLARYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKK
Ga0193298_103036813300018784MarineARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKK
Ga0193298_103152723300018784MarineTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193095_103055723300018785MarineFLARYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0192928_102172423300018793MarineTIISLYKRFLIIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193357_104998813300018794MarineYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKK
Ga0193117_103663723300018796MarineTTIISLYERFLIIIGYLAGLLLLIIVSHNPDFNNQFEQFHNVICPFQKSNIVITTMKR
Ga0193283_101813223300018798MarineTTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0192824_103168513300018801MarineLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKK
Ga0193281_102512713300018803MarineYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKK
Ga0192854_106976413300018808MarineLARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKR
Ga0192861_102273623300018809MarineIYLATTIISLHKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKK
Ga0192829_102814713300018812MarineATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFPNVICPFQKSNIVITTMKR
Ga0193497_102232313300018819MarineATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193526_103591123300018833MarineTIISLYERLLIIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0192927_103183323300018837MarineYLATTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMK
Ga0192933_103271413300018841MarineLYKRFLIIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193363_102807213300018857MarineYKRFLRIIGYLASLLLLIIVSHNPDFNNRFDQFHNVICPFQKSNIVITTMKRLWR
Ga0193413_101417423300018858MarineYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNRFDQFHNVICPFQKSNIVITTMKRLWR
Ga0193199_103152523300018859MarineFLARYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKK
Ga0192835_102406623300018863MarineFLARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKR
Ga0193276_102648013300018883MarineARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKR
Ga0193176_1005338523300018912MarineLVRYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193176_1005356823300018912MarineARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNRFDQFHNVICPFQKSNIVITTMKRLWR
Ga0193262_1003058623300018923MarineIYLATTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNKEQFQNVICPFQNFYIVITTMK
Ga0193096_1008312613300018924MarineLATTIISLYERFLIIIGYLKGLLLSIIVSHNPDFNNQFEQFPNVICPFQKSNIVITTMKR
Ga0193096_1008338013300018924MarineATTIISLYKSFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKK
Ga0192818_1002047823300018940MarineFFKARSIYLATTIISLYERFLIIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193265_1006307823300018941MarineMASQRIKARSIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKRLWR
Ga0193266_1005163723300018943MarineFLARYIYLATTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNKEQFQNVICPFQNFYIVITTMKR
Ga0193010_1003846713300018949MarineFFLARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNRFDQFHNVICPFQKSNIVITTMKR
Ga0192892_1011169913300018950MarineLATTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193567_1006349913300018953MarineARNIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQRSNIVITTMKR
Ga0193567_1006378933300018953MarineARNIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193560_1006241423300018958MarineRILARYIYLATTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193480_1006162523300018959MarineITDGLVLARYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKRLWR
Ga0192930_1008258913300018960MarineRKQKPACVRIASQRILARYIYLATTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQRSNIVITTMKR
Ga0192930_1008290613300018960MarineRKQKPACVRIASQRILARYIYLATTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0192930_1008876913300018960MarineARYIYLATTIISLYKRFLKIIGYLAGLLLLIIVSHNPDFYNQFEQFQNVICPFQKSNIVITTMKR
Ga0193559_1006564823300018971MarineARYIYLATTIISLYKRFLIIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193554_1013477813300018986MarineFFFLARYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVI
Ga0192932_1009471613300018991MarineRYIYLATTIISLYERFLIIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193518_1010819413300018992MarineLYKRFLIIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKR
Ga0193280_1009917913300018994MarineFFRIARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKK
Ga0193514_1007860813300018999MarineARYIYLATTIISLYKRFLRIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193345_1004663223300019002MarineFFLARYIYLATTIISLHKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKK
Ga0193345_1004758223300019002MarineARYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKK
Ga0193527_1012488023300019005MarineVRMASQRIKARNIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193361_1007127713300019008MarineFLARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193525_1015338123300019015MarineNIYLATTIISLYKRFLIIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193094_1008489613300019016MarineFFLARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKK
Ga0192860_1007891013300019018MarineKKPACVRNASHRILARYIYLATTIISLHKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKK
Ga0193555_1008316923300019019MarineARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNRFDQFHNVICPFQKSNIVITTMKR
Ga0192857_1028761223300019040MarineLFATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICLFQKSYIVITTMK
Ga0192998_1007770813300019043MarineLLARYIYLATTIISLYERFLIIIGYLAGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKK
Ga0193189_1003425313300019044MarineTTIISLYERFLIIIGYLKGLLLSIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0192826_1007176223300019051MarineFFFFLARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKK
Ga0193356_1013319113300019053MarineTIISLYKRFLIIIGYLAGLLLLIIVSHNTDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193208_1014155023300019055MarineFFFFFFLARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKR
Ga0193208_1036037523300019055MarineFFLARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSYIVITTMKR
Ga0193155_101881923300019121MarineIISLYKRFLIIIGYLASLLLLIIVSHNPDFNNQFEQFHNVICPFQKSNIVITTMKR
Ga0193499_102490733300019130MarineATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNRFDQFHNVICPFQKSKIVITTMKR
Ga0193453_103486313300019147MarineFFFFLARYIYLATTIISLYKRFLRIIGYLAGLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193239_1009207123300019148MarineFFLARHIYLATTIISLYERFLRIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR
Ga0193564_1006489423300019152MarineARNIYLATTIISLYKRFLIIIGYLASLLLLIIVSHNPDFNNQFEQFQNVICPFQKSNIVITTMKR


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