Metagenome Family F102430

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102430
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	59 residues
Representative Sequence	MDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTIHMVLTGGDDEE
Number of Associated Samples	18
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	21.00 %
% of genes near scaffold ends (potentially truncated)	75.25 %
% of genes from short scaffolds (< 2000 bps)	65.35 %
Associated GOLD sequencing projects	11
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (49.505 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Algae → Red Algae → Unclassified → Unclassified → Marine (85.148 % of family members)
Environment Ontology (ENVO)	Unclassified (89.109 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Surface (saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.10% β-sheet: 0.00% Coil/Unstructured: 33.90%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF03184	DDE_1	6.93
PF03221	HTH_Tnp_Tc5	5.94
PF08240	ADH_N	0.99
PF14223	Retrotran_gag_2	0.99
PF00635	Motile_Sperm	0.99
PF01641	SelR	0.99
PF07727	RVT_2	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Rhodophyta	phylum	Rhodophyta	42.57 %
All Organisms	root	All Organisms	7.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Bangiophyceae	class	Rhodophyta → Bangiophyceae	42.57 %
cellular organisms	root	All Organisms → cellular organisms	7.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Bangiales	order	Rhodophyta → Bangiophyceae → Bangiales	42.57 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	7.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Bangiaceae	family	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae	42.57 %
Amoebozoa	clade	All Organisms → cellular organisms → Eukaryota → Amoebozoa	0.99 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Porphyra	genus	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra	42.57 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.99 %
Discosea	phylum	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	42.57 %
Flabellinia	class	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia	0.99 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	42.57 %
Dactylopodida	order	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Dactylopodida	0.99 %
PX clade	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	42.57 %
Phaeophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae	0.99 %
Paramoebidae	family	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Dactylopodida → Paramoebidae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	42.57 %
Ectocarpales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae → Ectocarpales	0.99 %
Paramoeba	genus	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Dactylopodida → Paramoebidae → Paramoeba	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	42.57 %
Ectocarpaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae → Ectocarpales → Ectocarpaceae	0.99 %
Paramoeba aestuarina	species	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Dactylopodida → Paramoebidae → Paramoeba → Paramoeba aestuarina	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	42.57 %
Ectocarpus	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae → Ectocarpales → Ectocarpaceae → Ectocarpus	0.99 %
Paramoeba aestuarina	species	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Dactylopodida → Paramoebidae → Paramoeba → Paramoeba aestuarina	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004791\|Ga0068459_102857	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	8536	Open in IMG/M
3300005647\|Ga0079203_1020773	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3147	Open in IMG/M
3300005647\|Ga0079203_1029109	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	2481	Open in IMG/M
3300005647\|Ga0079203_1060754	Not Available	1411	Open in IMG/M
3300005647\|Ga0079203_1205190	Not Available	531	Open in IMG/M
3300005651\|Ga0079202_10032655	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	2074	Open in IMG/M
3300005651\|Ga0079202_10063436	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	1383	Open in IMG/M
3300005651\|Ga0079202_10073053	Not Available	1258	Open in IMG/M
3300005651\|Ga0079202_10073596	Not Available	1253	Open in IMG/M
3300005651\|Ga0079202_10105931	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	976	Open in IMG/M
3300005651\|Ga0079202_10170937	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	687	Open in IMG/M
3300005651\|Ga0079202_10185474	Not Available	646	Open in IMG/M
3300005654\|Ga0079204_10114051	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	1299	Open in IMG/M
3300005654\|Ga0079204_10131011	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	1179	Open in IMG/M
3300005654\|Ga0079204_10350828	Not Available	579	Open in IMG/M
3300009072\|Ga0115030_1001036	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	12313	Open in IMG/M
3300009072\|Ga0115030_1002345	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	8410	Open in IMG/M
3300009072\|Ga0115030_1002832	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	7576	Open in IMG/M
3300009072\|Ga0115030_1006005	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	4860	Open in IMG/M
3300009072\|Ga0115030_1013490	All Organisms → cellular organisms → Eukaryota	2659	Open in IMG/M
3300009072\|Ga0115030_1016844	Not Available	2209	Open in IMG/M
3300009072\|Ga0115030_1033425	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	1263	Open in IMG/M
3300009072\|Ga0115030_1041013	Not Available	1075	Open in IMG/M
3300009072\|Ga0115030_1043295	All Organisms → cellular organisms → Eukaryota	1029	Open in IMG/M
3300009072\|Ga0115030_1046620	Not Available	970	Open in IMG/M
3300009072\|Ga0115030_1056074	Not Available	838	Open in IMG/M
3300009072\|Ga0115030_1060494	Not Available	792	Open in IMG/M
3300009072\|Ga0115030_1080011	Not Available	643	Open in IMG/M
3300009072\|Ga0115030_1092840	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	578	Open in IMG/M
3300009072\|Ga0115030_1106107	Not Available	526	Open in IMG/M
3300009073\|Ga0114957_1009812	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	6946	Open in IMG/M
3300009073\|Ga0114957_1038560	All Organisms → cellular organisms → Eukaryota	2312	Open in IMG/M
3300009073\|Ga0114957_1038653	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Dactylopodida → Paramoebidae → Paramoeba → Paramoeba aestuarina	2308	Open in IMG/M
3300009073\|Ga0114957_1043074	Not Available	2109	Open in IMG/M
3300009073\|Ga0114957_1057620	Not Available	1664	Open in IMG/M
3300009073\|Ga0114957_1082327	Not Available	1242	Open in IMG/M
3300009073\|Ga0114957_1198235	Not Available	614	Open in IMG/M
3300009410\|Ga0114955_1010572	Not Available	3477	Open in IMG/M
3300009410\|Ga0114955_1017705	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	2310	Open in IMG/M
3300009410\|Ga0114955_1030971	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	1445	Open in IMG/M
3300009410\|Ga0114955_1031188	Not Available	1436	Open in IMG/M
3300009410\|Ga0114955_1045076	Not Available	1060	Open in IMG/M
3300009410\|Ga0114955_1058570	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	854	Open in IMG/M
3300009410\|Ga0114955_1058982	Not Available	850	Open in IMG/M
3300009410\|Ga0114955_1069063	Not Available	748	Open in IMG/M
3300009410\|Ga0114955_1076643	Not Available	690	Open in IMG/M
3300009410\|Ga0114955_1082378	Not Available	652	Open in IMG/M
3300009410\|Ga0114955_1095811	Not Available	581	Open in IMG/M
3300009410\|Ga0114955_1105435	Not Available	541	Open in IMG/M
3300009415\|Ga0115029_1010545	All Organisms → cellular organisms → Eukaryota	4183	Open in IMG/M
3300009415\|Ga0115029_1016992	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3029	Open in IMG/M
3300009415\|Ga0115029_1048337	Not Available	1383	Open in IMG/M
3300009415\|Ga0115029_1063108	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	1132	Open in IMG/M
3300009415\|Ga0115029_1064028	Not Available	1121	Open in IMG/M
3300009417\|Ga0114953_1024331	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	2946	Open in IMG/M
3300009417\|Ga0114953_1075558	All Organisms → cellular organisms → Eukaryota	1059	Open in IMG/M
3300009417\|Ga0114953_1098829	Not Available	832	Open in IMG/M
3300009417\|Ga0114953_1112341	Not Available	744	Open in IMG/M
3300009417\|Ga0114953_1112853	Not Available	742	Open in IMG/M
3300009417\|Ga0114953_1153278	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	574	Open in IMG/M
3300009421\|Ga0114952_1045618	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	1776	Open in IMG/M
3300009421\|Ga0114952_1163184	Not Available	720	Open in IMG/M
3300009421\|Ga0114952_1229292	Not Available	570	Open in IMG/M
3300009439\|Ga0115031_1075220	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	1491	Open in IMG/M
3300009439\|Ga0115031_1155410	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	841	Open in IMG/M
3300009446\|Ga0114956_1202007	Not Available	855	Open in IMG/M
3300009446\|Ga0114956_1247434	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	745	Open in IMG/M
3300009446\|Ga0114956_1319717	Not Available	628	Open in IMG/M
3300027009\|Ga0209093_1000344	All Organisms → cellular organisms → Eukaryota	24643	Open in IMG/M
3300027009\|Ga0209093_1003928	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	7585	Open in IMG/M
3300027009\|Ga0209093_1005181	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	6254	Open in IMG/M
3300027009\|Ga0209093_1007161	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	4868	Open in IMG/M
3300027009\|Ga0209093_1007372	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	4734	Open in IMG/M
3300027009\|Ga0209093_1008507	Not Available	4191	Open in IMG/M
3300027009\|Ga0209093_1015975	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	2169	Open in IMG/M
3300027009\|Ga0209093_1017511	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	1953	Open in IMG/M
3300027009\|Ga0209093_1025325	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	1272	Open in IMG/M
3300027009\|Ga0209093_1035056	Not Available	880	Open in IMG/M
3300027028\|Ga0209295_1027905	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	1440	Open in IMG/M
3300027028\|Ga0209295_1028343	Not Available	1420	Open in IMG/M
3300027028\|Ga0209295_1053063	Not Available	793	Open in IMG/M
3300027028\|Ga0209295_1053570	Not Available	785	Open in IMG/M
3300027262\|Ga0209303_1003157	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	7907	Open in IMG/M
3300027262\|Ga0209303_1016928	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	2281	Open in IMG/M
3300027262\|Ga0209303_1017511	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae → Ectocarpales → Ectocarpaceae → Ectocarpus	2228	Open in IMG/M
3300027262\|Ga0209303_1027799	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	1582	Open in IMG/M
3300027262\|Ga0209303_1048195	Not Available	1028	Open in IMG/M
3300027262\|Ga0209303_1050064	Not Available	998	Open in IMG/M
3300027325\|Ga0209186_1003228	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	11262	Open in IMG/M
3300027325\|Ga0209186_1011755	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	4839	Open in IMG/M
3300027325\|Ga0209186_1021468	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	2948	Open in IMG/M
3300027325\|Ga0209186_1030094	Not Available	2152	Open in IMG/M
3300027325\|Ga0209186_1035911	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	1817	Open in IMG/M
3300027325\|Ga0209186_1063337	Not Available	1021	Open in IMG/M
3300027325\|Ga0209186_1077804	Not Available	819	Open in IMG/M
3300027325\|Ga0209186_1087041	Not Available	724	Open in IMG/M
3300027498\|Ga0209185_1133345	Not Available	570	Open in IMG/M
3300027498\|Ga0209185_1133664	Not Available	569	Open in IMG/M
3300027554\|Ga0209831_1032339	Not Available	2410	Open in IMG/M
3300027554\|Ga0209831_1102998	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	859	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	86.14%
Environmental	Environmental	13.86%

Habitat	Taxonomy	Distribution
Algae	Host-Associated → Algae	86.14%
Aquatic	Environmental → Aquatic	13.86%

Habitat	Taxonomy	Distribution
Red Algae	Host-Associated → Algae → Red Algae	86.14%
Marine	Environmental → Aquatic → Marine	13.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Algae → Red Algae → Unclassified	86.14%
Unclassified	Environmental → Aquatic → Marine → Unclassified	13.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Algae → Red Algae → Unclassified → Unclassified	86.14%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	13.86%

Habitat	Taxonomy	Distribution
Marine	Host-Associated → Algae → Red Algae → Unclassified → Unclassified → Marine	85.15%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	13.86%
Porphyra Umbilicalis	Host-Associated → Algae → Red Algae → Unclassified → Unclassified → Porphyra Umbilicalis	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004791	Porphyra umbilicalis microbial communities from the coast of Maine, USA, in Atlantic Ocean	Host-Associated	Open in IMG/M
3300005647	Marine algae microbial communities from Bantry Bay - Bantry Bay, Ireland	Environmental	Open in IMG/M
3300005651	Marine algae microbial communities from Blueberry Hill - Blueberry Hill, Maine	Environmental	Open in IMG/M
3300005654	Porphyra Blade Metagenome Co-Assembly	Environmental	Open in IMG/M
3300009072	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male1 metaG	Host-Associated	Open in IMG/M
3300009073	Marine algal microbial communities from Bantry Bay, Ireland - BantryBay_4 metaG	Host-Associated	Open in IMG/M
3300009410	Marine algal microbial communities from Porto, Portugal - Porto_5 metaG	Host-Associated	Open in IMG/M
3300009415	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Asex1 metaG	Host-Associated	Open in IMG/M
3300009417	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male2 metaG	Host-Associated	Open in IMG/M
3300009421	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Asex2 metaG	Host-Associated	Open in IMG/M
3300009439	Marine algal microbial communities from Maine, USA - Maine_Asex4_metaG	Host-Associated	Open in IMG/M
3300009446	Marine algal microbial communities from Maine, USA - Maine_Asex2 metaG	Host-Associated	Open in IMG/M
3300027009	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male1 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027028	Marine algal microbial communities from Porto, Portugal - Porto_5 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027262	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Asex1 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027325	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male2 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027498	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Asex2 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027554	Marine algal microbial communities from Maine, USA - Maine_Asex4_metaG (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068459_1028574	3300004791	Porphyra Umbilicalis	MDVSHLVAMMAYTALEHEFDGISGQEQVLTVRRWLTAGTDVEAIVQTVHMVLTGGDDEE*
Ga0079203_10207733	3300005647	Marine	MDMSHLVAMMANTSVEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVHTVLTGGDDEE*
Ga0079203_10291093	3300005647	Marine	VAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTIHMVLTGGDDEE*
Ga0079203_10607541	3300005647	Marine	HLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIYQTVHMVLTGRDDEE*
Ga0079203_12051901	3300005647	Marine	VAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDHTVGTVLTVGDDEE*
Ga0079202_100326551	3300005651	Marine	MDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTIHMVLTGGDDEE*
Ga0079202_100634362	3300005651	Marine	MDVSHLVAMMANTSLEHEFDGRSGQEQVLAVRRWLTAETDVEAIDQTVHIVLTGGDDEE*
Ga0079202_100730532	3300005651	Marine	VSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEATDQTVHMVLTGRDDEE*
Ga0079202_100735961	3300005651	Marine	AHMDVSHLVAMMANTSLEHEFDGLSGQEQVVLAVRRWLTAESDVEAIDQTVHMVLTRRDDE*
Ga0079202_101059312	3300005651	Marine	MDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETEVEAIDQTFHMVLTGGDDEE*
Ga0079202_101709372	3300005651	Marine	MANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVHMVLTGGDDEE*
Ga0079202_101854741	3300005651	Marine	MDVSHFEAMMANTSLEHEFDGFSGQEQVLAVRRWLTAETDVEAIDQTV
Ga0079204_101140512	3300005654	Marine	MAKTMRLQLGDIQVVAEPSHMDVSHLEAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVHMVLT
Ga0079204_101310112	3300005654	Marine	LVAMMANTSLEHEFDGLSGQEQVLVVRRWLTAETGVEAIDQTVHMVLTGGDDEE*
Ga0079204_103508281	3300005654	Marine	SHLVAMMAHTSLEHELDGLSGQEQVLAVRRWLTAETDVEAIDQTVNMVLTGADNEE*
Ga0115030_100103617	3300009072	Marine	VAEPDHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWQTAETDVESIDQTVHMVLTRRDDQE*
Ga0115030_10023458	3300009072	Marine	VAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQRVHMVLTGGDDEE*
Ga0115030_10028324	3300009072	Marine	VAEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVWRWLTAETDVEAIDQTVHMVLNGGDDEE*
Ga0115030_10060057	3300009072	Marine	SHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEATDQTVHMVWTGGDDEE*
Ga0115030_10134904	3300009072	Marine	MMANTSLEHAFDGLSGQEQVLAERRWLTAGTDVEAIDQTVHMVLTGGDDEE*
Ga0115030_10168441	3300009072	Marine	HLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIAQTVHMVLTGGDNEE*
Ga0115030_10334252	3300009072	Marine	AEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLMAETDVEAIDQTVHMVLTGGDDEE*
Ga0115030_10410131	3300009072	Marine	AMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVGMVLTGEDDEE*
Ga0115030_10432952	3300009072	Marine	MMANTSLEHAFDGLSGQEQVLAVRRWLTAVTDVEAIDQTVHMVLTGGGDEE*
Ga0115030_10466202	3300009072	Marine	VAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTTRTVLTGGDDEE*
Ga0115030_10560741	3300009072	Marine	VVAEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRCLTAETDVEAIDQTVHMVLTGGDDEE*
Ga0115030_10604941	3300009072	Marine	AHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETNVKAIDQTVQMVLTAGDDEER*
Ga0115030_10800111	3300009072	Marine	ANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAINQTVHMVVTGEDDEE*
Ga0115030_10928402	3300009072	Marine	AMMANTSLEHEFDSLSGQEQVLAVRRWLTAETDVEAIDQTAHMVLTGGDNEE*
Ga0115030_11061071	3300009072	Marine	MMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVHKVLNGGDDEE*
Ga0114957_10098126	3300009073	Marine	MMAYTALEHEFDGISGQEQVLTVRRWLTAGTDVEAIVQTVHMVLTGGDDEE*
Ga0114957_10385601	3300009073	Marine	MQVVAEPAHMDVSHLVAVMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVHMV
Ga0114957_10386531	3300009073	Marine	MDVSHVVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDHTVGTVLTVGDDEE*
Ga0114957_10430741	3300009073	Marine	MDVSHLVAMMANTSLEHEFDGLSGQEQVVLAVRRWLTAESDVEAIDQTVHMVLTGRDDE*
Ga0114957_10576203	3300009073	Marine	SHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIYQTVHMVLTGRDDEE*
Ga0114957_10823272	3300009073	Marine	GDIQVVAEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLVVRRWLTAETGVEAIDQTVHMVLTGGDDEE*
Ga0114957_11982352	3300009073	Marine	MDVSHVVAMMANTSLEHEFDGRSGQEQVLAVRRWLTAETDVEAIDQTVHIVLTGGDDEE*
Ga0114955_10105725	3300009410	Marine	MMANTSLEHAFDCLSGQEQVLAERRWLTAGTDVEAIDQTVHMVLTWGDDEE*
Ga0114955_10177052	3300009410	Marine	AEPAHMDVSHLVAMMANTSLEHEFDGLSGQKQILAVRRWLTAETDVEAIDQTVHMVLTGGDDEE*
Ga0114955_10309711	3300009410	Marine	MDVSHLVAMMANTSLEHESDRLSGQEQVLAVRRWLTAETDVKAIDQTVHMVLTGGDDEE*
Ga0114955_10311881	3300009410	Marine	QVVAEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRRLTAETDVEAIDQTAHMVLTGGDDEE*
Ga0114955_10450761	3300009410	Marine	AMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVDMVLTGGDDEE*
Ga0114955_10585701	3300009410	Marine	MDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVKAIDQTVHMVLTGGDDEE*
Ga0114955_10589821	3300009410	Marine	PAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAESDVEAIDQMVHMVLTGGDDEE*
Ga0114955_10690632	3300009410	Marine	VAEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWQTAETDVESIDQTVHMVLTRRDDQE*
Ga0114955_10766432	3300009410	Marine	SHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAINQTVHMVLTRENDEE*
Ga0114955_10823781	3300009410	Marine	VVAEPGLMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTAHMVLTGGDNEE*
Ga0114955_10958111	3300009410	Marine	EPAHMDVSHLVAMMANTSLEHEFDGLSGKEQVLAVRRWLTAETDVEAIDQTVHMVVTGGDDEE*
Ga0114955_11054351	3300009410	Marine	LQLGDIQVVAEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAESDVEAIDQMVHMVLTGGDDEE*
Ga0115029_10105452	3300009415	Marine	MDVSHVVAMMVNTSLEHEFDGLSGQEQVLAVRRWLTAETDDEAIDHTVDTVLTVEDDEE*
Ga0115029_10169925	3300009415	Marine	MDVSHFEAMMANTSLEHEFDGFSGQEQVLAVRRWLTAETDVEAIDQTVQMVLTGGDDEE*
Ga0115029_10483371	3300009415	Marine	VAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVHMVLTGGDDEQ*
Ga0115029_10631082	3300009415	Marine	NTSLEHEFDGLSGQEQVLAVRRWLTAETEVEAIDQTFHMVLTGGDDEE*
Ga0115029_10640282	3300009415	Marine	VAEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLVVRRWLTAETGVEAIDQTVHMVLTDGDDEE*
Ga0114953_10243311	3300009417	Marine	AEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVHMVLTGGDDEE*
Ga0114953_10755581	3300009417	Marine	MYVSHLVPMMSNTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVHMD
Ga0114953_10988292	3300009417	Marine	LQLGDIQVVAEPAHMDVSHLVAMMANTSLEHEIDGLSGQELVLAVRRWLTAETDVEAIDQTVHMVLIGGDDEE*
Ga0114953_11123412	3300009417	Marine	GDIQVVAEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQILAVRRWLTAETDVEAIDQTAHMVLTGGDDEE*
Ga0114953_11128531	3300009417	Marine	VAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTLHMVLTGGDDDE*
Ga0114953_11532782	3300009417	Marine	AMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVGMVVTGEDDEE*
Ga0114952_10456181	3300009421	Marine	HMDVSHLVAMMANTSLEHEFDGLSGQEQVLVVRRWLTAETGVEAIDQTVHMVLTDGDDEE
Ga0114952_11631842	3300009421	Marine	AMMANTSLEHEFAGLSVQEQFLERRRWLTAETDVYAIDQIVHMVLTGGDDEE*
Ga0114952_12292921	3300009421	Marine	DIQVVAEPTYMDVPHLVAMMAHTSLEHELDGLSGQEQVLAVRRWLTAETDVEAIDQTVNMVLTGADNKE*
Ga0115031_10752202	3300009439	Marine	MQVVAEPAHMDVSHLVAVMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVHMVLTGGDDEE*
Ga0115031_11554101	3300009439	Marine	QLGDIQVVAEPTYMDVSHLVAMMANTSLEHEFDGLSGQEQVMAVRHWLTAETDVEAIDQTAHMVLTRGDDEE*
Ga0114956_12020071	3300009446	Marine	FDGLSGQEQVLAVRRWLTAETDVEAIEQTVHMVLTWGDDEE*
Ga0114956_12474341	3300009446	Marine	AHMDVSHLVAMMANTSLEHEFNGPSGQEHVLAVRRWLTAETDVEAIDQTVHMVLTGGDDEE*
Ga0114956_13197172	3300009446	Marine	MQVVAEPAHMDVSHLVAVMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTV
Ga0209093_100034431	3300027009	Marine	MDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETNVKAIDQTVQMVLTAGDDEER
Ga0209093_10039281	3300027009	Marine	VVAEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVWRWLTAETDVEAIDQTVHMVLNGGDDEE
Ga0209093_10051818	3300027009	Marine	MDVSHLVAMMANTSLEHAFDGLSGQEQVLAERRWLTAGTDVEAIDQTVHMVLTGGDDEE
Ga0209093_10071617	3300027009	Marine	VSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEATDQTVHMVWTGGDDEE
Ga0209093_10073721	3300027009	Marine	VSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAINQTVHMVLTGGDDEE
Ga0209093_10085078	3300027009	Marine	SHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIAQTVHMVLTGGDNEE
Ga0209093_10159752	3300027009	Marine	AMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVHKVLNGGDDEE
Ga0209093_10175112	3300027009	Marine	MDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEANDQTVHMVLTGGDDEE
Ga0209093_10253252	3300027009	Marine	VAEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLMAETDVEAIDQTVHMVLTGGDDEE
Ga0209093_10350562	3300027009	Marine	MDVSQLVAMMANTSLEHAFDGLSGQEQVLAVRRWLTAVTDVEAIDQTVHMVLTGGGDEE
Ga0209295_10279051	3300027028	Marine	MDVSHLVAMMANTSLEHESDRLSGQEQVLAVRRWLTAETDVKAIDQTVHMVLTGGDDEE
Ga0209295_10283432	3300027028	Marine	IQVVAEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRRLTAETDVEAIDQTAHMVLTGGDDEE
Ga0209295_10530632	3300027028	Marine	SLEHEFDGLSCQEQVLAVRRWLTAETDVEAIDRTIHTVLTGGDDEE
Ga0209295_10535703	3300027028	Marine	EPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWQTAETDVESIDQTVHMVLTRRDDQE
Ga0209303_100315715	3300027262	Marine	VVAMMVNTSLEHEFDGLSGQEQVLAVRRWLTAETDDEAIDHTVDTVLTVEDDE
Ga0209303_10169281	3300027262	Marine	VAEPAHMDVSHLVAMMANTYLKHEFDGLSGQEQVLAMRRWLTAETDVEAIDHTVHMFLTGGDDE
Ga0209303_10175112	3300027262	Marine	MDVSHLVAMMAYTALEHEFDGISGQEQVLTVRRWLTAGTDVEAIVQTVHMVLTGGDDEE
Ga0209303_10277991	3300027262	Marine	MDVSHFEAMMANTSLEHEFDGFSGQEQVLAVRRWLTAETDVEAIDQTVQMVLTGGDDEE
Ga0209303_10481952	3300027262	Marine	VAEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLVVRRWLTAETGVEAIDQTVHMVLTDGDDEE
Ga0209303_10484002	3300027262	Marine	QLGDIQVVAEPAHMDVSHLVAMMANTSLEHEFEGPSGQEQVLAVRRWLTAETDVEAIDQTDHMVLTGGDDE
Ga0209303_10500641	3300027262	Marine	VSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEATDQTVHMVLTGRDDEE
Ga0209186_100322814	3300027325	Marine	MDVSHLVAMMANTSLEHEFDGLSGQEQILAVRRWLTAETDVEAIDQTAHMVLTGGDDEE
Ga0209186_10117551	3300027325	Marine	TSLEHEFDGLSGQEQVLAVRRWLTAETDVEATDQTVHMVWTGGDDEE
Ga0209186_10214681	3300027325	Marine	EPAHMDVSHLVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTVHMVLTGGDDEE
Ga0209186_10300942	3300027325	Marine	MGDIQVVTEPAHMDVSHLVAMMANTSLEHESDGLSGQEQVLAVRRWLTAETDVEAIDQTVHMVLTGGDDEE
Ga0209186_10359112	3300027325	Marine	VAEPAHMDVSHLVAMMANTSLEHEFDGLSGQEQILAVRRWLTAETDAEAIDQTVHMVLTGGDDEK
Ga0209186_10633371	3300027325	Marine	LVAMMANTSLEHEFDGLSGQEQVLAVRRWLTAETDVEAIDQTLHMVLTGGDDDE
Ga0209186_10778041	3300027325	Marine	LGDIQVVAEPAHMDVSHLVAMMANTSLEHEIDGLSGQELVLAVRRWLTAETDVEAIDQTVHMVLIGGDDEE
Ga0209186_10870411	3300027325	Marine	MNVSHLMAMMANTSLEHAFDGLSGQEQVLAVRRWLTAETDVEAIDQTVHMVLTGGDDEE
Ga0209185_11333451	3300027498	Marine	GVIQVVAEPAHMDVSHLVAMIANTCLEHEFDGLRGQEQVLAVRRWLTAETDVEAIDQTVHMVLTGGDDEES
Ga0209185_11336641	3300027498	Marine	VIEVVAEPAHMDVSHLVAMMAHTSLEHELDGLSGQEQVLAVRRWLTAETDVEAIDQTVNMVLTGADNKE
Ga0209831_10323395	3300027554	Marine	MDVSHLVAMMANTSLEHEFDGRSGQEQVLAVRRWLTAETDVEAIDQTVHIVLTGGDDEE
Ga0209831_11029981	3300027554	Marine	QLGDIQVVAEPTYMDVSHLVAMMANTSLEHEFDGLSGQEQVMAVRHWLTAETDVEAIDQTAHMVLTRGDDEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102430

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences