Metagenome / Metatranscriptome Family F102421

Basic Information
Family ID	F102421
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	55 residues
Representative Sequence	VNELVTSRAKAAVRSRTTRRGFRVLAVEALGPLTVLGGIVWAFAQPYRVTFFYP
Number of Associated Samples	87
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.00 %
% of genes near scaffold ends (potentially truncated)	99.01 %
% of genes from short scaffolds (< 2000 bps)	96.04 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (90.099 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (14.852 % of family members)
Environment Ontology (ENVO)	Unclassified (40.594 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.485 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.85% β-sheet: 16.67% Coil/Unstructured: 31.48%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF09587	PGA_cap	72.28
PF16694	Cytochrome_P460	7.92
PF00155	Aminotran_1_2	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.10 %
Unclassified	root	N/A	9.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.10 %
Unclassified	root	N/A	9.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.10 %
Unclassified	root	N/A	9.90 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.12 %
Unclassified	root	N/A	9.90 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.12 %
Unclassified	root	N/A	9.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.79 %
Unclassified	root	N/A	9.90 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.90 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.95 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.95 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c1030457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	965	Open in IMG/M
3300000956\|JGI10216J12902_100996949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300000956\|JGI10216J12902_108245066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1455	Open in IMG/M
3300003987\|Ga0055471_10136220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	742	Open in IMG/M
3300003996\|Ga0055467_10171757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	658	Open in IMG/M
3300004013\|Ga0055465_10354515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300004114\|Ga0062593_102854230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300004114\|Ga0062593_103504183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300004114\|Ga0062593_103518721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	503	Open in IMG/M
3300004156\|Ga0062589_100193587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1458	Open in IMG/M
3300004157\|Ga0062590_101418681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300004480\|Ga0062592_100028654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2703	Open in IMG/M
3300005327\|Ga0070658_11823424	Not Available	526	Open in IMG/M
3300005328\|Ga0070676_11238799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300005329\|Ga0070683_101348506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	685	Open in IMG/M
3300005336\|Ga0070680_100593547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	950	Open in IMG/M
3300005337\|Ga0070682_100887684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300005339\|Ga0070660_100610254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	912	Open in IMG/M
3300005343\|Ga0070687_101338721	Not Available	533	Open in IMG/M
3300005344\|Ga0070661_101516959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	565	Open in IMG/M
3300005354\|Ga0070675_100276057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1476	Open in IMG/M
3300005354\|Ga0070675_100599294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	999	Open in IMG/M
3300005438\|Ga0070701_10361738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	909	Open in IMG/M
3300005440\|Ga0070705_101948607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	501	Open in IMG/M
3300005459\|Ga0068867_100988894	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005518\|Ga0070699_101061800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	743	Open in IMG/M
3300005548\|Ga0070665_100329662	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300005564\|Ga0070664_100587037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1033	Open in IMG/M
3300005578\|Ga0068854_100987386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	745	Open in IMG/M
3300006038\|Ga0075365_10673087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300006048\|Ga0075363_100819638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300009094\|Ga0111539_12143996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300009098\|Ga0105245_12389661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300009156\|Ga0111538_12439174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656	Open in IMG/M
3300009162\|Ga0075423_12132847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300009176\|Ga0105242_10766623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	951	Open in IMG/M
3300009176\|Ga0105242_11195516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	779	Open in IMG/M
3300009177\|Ga0105248_10446451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1457	Open in IMG/M
3300009545\|Ga0105237_10959152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300009553\|Ga0105249_13517629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300010047\|Ga0126382_11262889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300010375\|Ga0105239_12969929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300010403\|Ga0134123_10374247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1295	Open in IMG/M
3300010403\|Ga0134123_11737123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300011119\|Ga0105246_11475219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300012884\|Ga0157300_1033222	Not Available	745	Open in IMG/M
3300012899\|Ga0157299_10267199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300012910\|Ga0157308_10079401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	924	Open in IMG/M
3300012912\|Ga0157306_10146484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M
3300012912\|Ga0157306_10164265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	714	Open in IMG/M
3300012916\|Ga0157310_10301517	Not Available	628	Open in IMG/M
3300012988\|Ga0164306_10188757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1437	Open in IMG/M
3300013102\|Ga0157371_10374444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1039	Open in IMG/M
3300013307\|Ga0157372_10531943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1370	Open in IMG/M
3300014259\|Ga0075311_1032758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	967	Open in IMG/M
3300014301\|Ga0075323_1098990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300014325\|Ga0163163_12753719	Not Available	548	Open in IMG/M
3300014745\|Ga0157377_10214148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1230	Open in IMG/M
3300014745\|Ga0157377_10708457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300015372\|Ga0132256_100499171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1327	Open in IMG/M
3300015373\|Ga0132257_100111468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3164	Open in IMG/M
3300015374\|Ga0132255_101191835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1147	Open in IMG/M
3300017792\|Ga0163161_11228131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300018469\|Ga0190270_11341915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	759	Open in IMG/M
3300018476\|Ga0190274_13920602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300019356\|Ga0173481_10588519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300019361\|Ga0173482_10697148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300019362\|Ga0173479_10437515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300020082\|Ga0206353_10094916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	724	Open in IMG/M
3300020082\|Ga0206353_11778879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699	Open in IMG/M
3300023102\|Ga0247754_1043070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1036	Open in IMG/M
3300023268\|Ga0247765_1096763	Not Available	623	Open in IMG/M
3300025795\|Ga0210114_1047344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300025899\|Ga0207642_10769214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300025907\|Ga0207645_10801947	Not Available	640	Open in IMG/M
3300025917\|Ga0207660_10472620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1015	Open in IMG/M
3300025918\|Ga0207662_10588156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	773	Open in IMG/M
3300025922\|Ga0207646_11298715	Not Available	635	Open in IMG/M
3300025926\|Ga0207659_10900625	Not Available	760	Open in IMG/M
3300026028\|Ga0208420_1013076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300026118\|Ga0207675_102053572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300026142\|Ga0207698_11499331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300028590\|Ga0247823_10328531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1155	Open in IMG/M
3300028590\|Ga0247823_10391421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1049	Open in IMG/M
3300028590\|Ga0247823_10988998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	631	Open in IMG/M
3300028596\|Ga0247821_10014387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4223	Open in IMG/M
3300028596\|Ga0247821_10859858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300028597\|Ga0247820_10160787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1409	Open in IMG/M
3300028809\|Ga0247824_10954105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300028889\|Ga0247827_10391316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300030336\|Ga0247826_10221503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1309	Open in IMG/M
3300030336\|Ga0247826_10666453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300031547\|Ga0310887_10245851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	996	Open in IMG/M
3300031548\|Ga0307408_100956760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	787	Open in IMG/M
3300031716\|Ga0310813_11632156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300031854\|Ga0310904_10643277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	728	Open in IMG/M
3300031908\|Ga0310900_11302520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300031940\|Ga0310901_10393312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300031943\|Ga0310885_10285261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	848	Open in IMG/M
3300034818\|Ga0373950_0144517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.40%
Host-Associated	Host-Associated	39.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.44%
Plants	Host-Associated → Plants	39.60%
Aquatic	Environmental → Aquatic	3.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.92%
Marine	Environmental → Aquatic → Marine	3.96%
Roots	Host-Associated → Plants → Roots	2.97%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.88%
Loam	Environmental → Terrestrial → Soil → Loam	9.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.98%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	14.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.94%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	14.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.95%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.97%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.98%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026028	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_10304572	2228664021	Soil	VNELVTPRAESAGRSRTARKTFRVVAIEALGPVTILGGIVWALAQPYRVTFFYPDGKGFW
JGI10216J12902_1009969493	3300000956	Soil	VNELVKLRPQPVDEPRAARQGLRVLVVEALGPLTVLGGLVWAFAQPYRVTFFYPE
JGI10216J12902_1082450662	3300000956	Soil	VNELVTSRAKAAVRSRATRRGIRVLAVEALGPLTVLGGIVWAFAQPYR
Ga0055471_101362202	3300003987	Natural And Restored Wetlands	VNELVTSRAKPAEQARTLRRGFRVLAVEALGPITVLGGIVWAFAQPYRVTFFYPEGKGFW
Ga0055467_101717572	3300003996	Natural And Restored Wetlands	VNELVTPRAQSADEPRIARKTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYPDGKGFW
Ga0055465_103545152	3300004013	Natural And Restored Wetlands	VNELVTHRANSADEPRVARRAARVLAIEAIGPLTVLGGIVWAFAQPYRVTFFYPEGKGAWDWL
Ga0062593_1028542301	3300004114	Soil	VNELVTPRAQSADEVRIARKTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYPDGKGFWDWAVQP
Ga0062593_1035041831	3300004114	Soil	VNELVTSRAEPAERSRTLRRGIRVLAVEALGPLTVLGGIVWAFAQPYRVTFFY
Ga0062593_1035187211	3300004114	Soil	VNEFVTSRTKAAVLARASRRGLRVLAVEALGPLTVLGGIVWAFAQPYRVTFFY
Ga0062589_1001935871	3300004156	Soil	VNELVTSRTKAAVRARASRRGLRVLAVEALGPLTVLGGIVWAFAQPYRVTFFYP
Ga0062590_1014186811	3300004157	Soil	VNELVTSRTKAAVRARASRRGLRVLAVEALGPLTVLGGIVWAFAQP
Ga0062592_1000286544	3300004480	Soil	VNELVTSRAEPAERSRTLRRGIRVLAVEALGPLTVLGGIVWAFAQPYRVTFFYP
Ga0070658_118234242	3300005327	Corn Rhizosphere	VNELVTSRTKAAVRARASRRGLRVLAVEALGPLTVLGGIVWAFAQPYRVTFF
Ga0070676_112387991	3300005328	Miscanthus Rhizosphere	VNELVTSRARAAVRARATRRGLRVLAVEALGPLTVLGGIVWAFAQPYRV
Ga0070683_1013485061	3300005329	Corn Rhizosphere	VNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYP
Ga0070680_1005935472	3300005336	Corn Rhizosphere	VNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYPDGKGFW
Ga0070682_1008876841	3300005337	Corn Rhizosphere	VNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYPDGKGFWDW
Ga0070660_1006102542	3300005339	Corn Rhizosphere	VNELVTPRAQTADEPRIERKTFRVVAIEALGPLTILGGIVWALAQPYRV
Ga0070687_1013387212	3300005343	Switchgrass Rhizosphere	VNEFVTSRAESAGQARSARKMVRVVAVEALGPLTILGGIVWAFAQPYRVTFF
Ga0070661_1015169592	3300005344	Corn Rhizosphere	VNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYPDGKGFWDWAVQPPLL
Ga0070675_1002760572	3300005354	Miscanthus Rhizosphere	VNELVTSRANPAEQARTLRRGSRILAVEALGPITVLGGIVWAFAQPYRVT
Ga0070675_1005992941	3300005354	Miscanthus Rhizosphere	VNEFVTSRAESAGQARSARKMVRVVAVEALGPLTILGGIVWAFAQPYRVTFFYPEGKGFWDWA
Ga0070701_103617382	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VNEFVTSRAESAGQARSARKMVRVVAVEALGPLTILGGIVWAFAQPYRVTFFYPEGK
Ga0070705_1019486072	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VNEFVTSRTKAAVLARASRRGLRVLAVEALGPITVLGGIVWAFAQPYRVTFFYP
Ga0068867_1009888941	3300005459	Miscanthus Rhizosphere	VNEFVTSRAESAGQARSARKMVRVVAVEALGPLTILGGIVWAFAQPYRVTFFYPEGKGFWDWAV
Ga0070699_1010618001	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VNELVTSRAKAAVRSRATRRGIRVLAVEALGPLTVLGGIVWAFAQPY
Ga0070665_1003296623	3300005548	Switchgrass Rhizosphere	MRYGADLARGTSDVNEFVTSRAESAGQARSARKMVRVVAVEALGPLTILGGIVWAFAQPYRVTFFYPDGKGFWDW
Ga0070664_1005870372	3300005564	Corn Rhizosphere	VNELVTSRANPAEQARTLRRGSRILAVEALGPITVLGGIVWAFAQPYR
Ga0068854_1009873862	3300005578	Corn Rhizosphere	VNELVTSRTKAAVRARASRRGLRVLAVEALGPLTVLGGIVWAF
Ga0075365_106730872	3300006038	Populus Endosphere	VNELVTSRARAAVRARATRRGLRVLAVEALGPLTVLGGIVWAFAQPYRVTFFYPEGKGFW
Ga0075363_1008196382	3300006048	Populus Endosphere	VNELVTSRANPAEQARTLRRGFRVLAVEALGPITVLGGIVWAFAQPYRVTFFYPEGKGFW
Ga0111539_121439962	3300009094	Populus Rhizosphere	VNELVTSRAKPAEQARTLRRGFRVLAVEALGPITVLGGIVWAFAQPYRVTFFYPEGKGFWDW
Ga0105245_123896612	3300009098	Miscanthus Rhizosphere	VNELVTSRANPAEQARTLRRGFRVLAVEALGPITVLGGIVWAFAQPYRVTFFYPEGKGF
Ga0111538_124391741	3300009156	Populus Rhizosphere	VEAPSIVNELVTPRAQTADEPRIARKTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYPDGKGFW
Ga0075423_121328472	3300009162	Populus Rhizosphere	VNELVTSRTKAAVRARASRRGLRVLAVEALGPLTVLGGIVWAFAQPYRVTFFYPEG
Ga0105242_107666231	3300009176	Miscanthus Rhizosphere	VEAPSIVNELVTPRAQTADEPRIERKTFRVVAIEALGPLTILGGIVWALAQPYRVT
Ga0105242_111955161	3300009176	Miscanthus Rhizosphere	VNELVTPRTKAAEEPRAARQGIRVLAVEALGPLTVLGGIV
Ga0105248_104464512	3300009177	Switchgrass Rhizosphere	MRYGADLARGTSDVNEFVTSRAESAGQARSARKMVRVVAVEALGPLTILGGIVWAFAQPYRVTFFYPEGKGFWDWAVQPP
Ga0105237_109591522	3300009545	Corn Rhizosphere	VEAPANVNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYP
Ga0105249_135176292	3300009553	Switchgrass Rhizosphere	VEAPAIVNELVTPRAESAGRSRTARKTFRVVAIEAIGPVTILGGIVWALAQPYRVTFFYP
Ga0126382_112628891	3300010047	Tropical Forest Soil	VNELVTSRAKAAVRSRTTRRGFRVLAVEALGPLTVLGGIVWAFAQPYRVTFFYP
Ga0105239_129699292	3300010375	Corn Rhizosphere	VEAPANVNELVTPRTESAGRPRTARQTFRVVAIEALGPLTMLGGIVWALAQPYRVTFF
Ga0134123_103742471	3300010403	Terrestrial Soil	VEAPAIVNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPY
Ga0134123_117371231	3300010403	Terrestrial Soil	VEAPANVNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPY
Ga0105246_114752191	3300011119	Miscanthus Rhizosphere	VEAPSIVNELVTPRAQTADEPRIERKTFRVVAIEALGPLTILGGIVWALAQPYRVTFFY
Ga0105246_115566042	3300011119	Miscanthus Rhizosphere	VEAPAIVNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQ
Ga0157300_10332221	3300012884	Soil	VAVNELVTSRAQPADQPRTARKTLRVVAVEALGPLTILGGIVWAFAQPY
Ga0157299_102671992	3300012899	Soil	VNELVTSRTKAAVRARASRRGLRVLAVEALGPLTVLGGIVWAFAQPYRVTFFYPEGKGFWDWAVQP
Ga0157308_100794012	3300012910	Soil	VNELVTSRTKAAVRARASRRGLRVLAVEALGPLTVLGGIVWAFAQPYRVTFFYPEGKGF
Ga0157306_101464842	3300012912	Soil	VNELVTSRARAAVRARATRRGLRVLAVEALGPLTVLGG
Ga0157306_101642651	3300012912	Soil	VEAPSIVNELVTPRAQSADEVRIARKTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYPDGKG
Ga0157310_103015171	3300012916	Soil	VEAPANVNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRV
Ga0164306_101887571	3300012988	Soil	VNELVTSRTKAAVRARASRRGLRVLAVEALGPLTVLGGI
Ga0157371_103744442	3300013102	Corn Rhizosphere	VEAPANVNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYPDGKGFWDW
Ga0157372_105319431	3300013307	Corn Rhizosphere	VNELVTSRARAAVRARATRRGLRVLAVEALGPLTVLGGIVWAF
Ga0075311_10327581	3300014259	Natural And Restored Wetlands	VNELVTTRTKAAEEPRVARRGLRVLTVEAIGPVTILGGI
Ga0075323_10989901	3300014301	Natural And Restored Wetlands	VNELVTSRAKHADGSRTARRGLRVLMVEALGPLTVLGGIVW
Ga0163163_127537192	3300014325	Switchgrass Rhizosphere	VEAPAIVNELVTPRAESAGRSRTARKTFRVVAIEALGPVTILGGIVWALAQP
Ga0157377_102141482	3300014745	Miscanthus Rhizosphere	VEAPANVNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYPDGKGFWDWAVQP
Ga0157377_107084571	3300014745	Miscanthus Rhizosphere	VEAPAIVNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRVTF
Ga0132256_1004991712	3300015372	Arabidopsis Rhizosphere	VEAPANVNELVTPRTESAGRPRTARQTFRVVAIEALGPLTMLGGIVWALAQPYRVTFFYPDGKGFWDWAVQ
Ga0132257_1001114681	3300015373	Arabidopsis Rhizosphere	VNELVTSRAKAAVRSRASRRGFRVLAVEALGPLTVLGGIVWAFAQPYR
Ga0132255_1011918352	3300015374	Arabidopsis Rhizosphere	VEAPANVNELVTPRTESAGRPRTARQTFRVVAIEALGPLTMLGGIVWALAQPYRVTFFYPDGKGFWDWAVQPPL
Ga0163161_112281311	3300017792	Switchgrass Rhizosphere	VNELVTSRARAAVRARATRRGLRVLAVEALGPLTVLGGIVWAFAQPYRVTFFYPE
Ga0190270_113419152	3300018469	Soil	VNELVTPRTNAAAESRAVRRGLRVLAIEALGPLTVLGGIVWAFAQPYRVTFFYP
Ga0190274_139206021	3300018476	Soil	MPDWTRGSRTVVNELVTPGTKATAESRAVRRGLRVLAIEALGPLTVLGGIVWAFAQPYRVTFF
Ga0173481_105885191	3300019356	Soil	VNELVTPRAESAGRSRTARKTFRVVAIEALGPLTILGGIVWALAQPYR
Ga0173482_106971481	3300019361	Soil	VNELVTSRAKPAEQARTLRRGFRVLAVEALGPITVLGGIVWAFAQPYRVTFFYPEGKG
Ga0173479_104375151	3300019362	Soil	VAVNELVTSRAQPADQPRTARKTLRVVAVEALGPLTILGGIVWAFAQPYRITF
Ga0206353_100949161	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VNELVTSRTKAAVRARASRRGLRVLAVEALGPLTVLGGIVWA
Ga0206353_117788792	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MEAPANVNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYP
Ga0247754_10430701	3300023102	Soil	VNELVTSRAKPAEQARTLRRGFRVLAVEALGPITVLGGIVWAFAQPYRVTFFYP
Ga0247765_10967632	3300023268	Plant Litter	VAVNELVTSRAQPADQPRTARKTLRVVAVEALGPLTILGGIVWAFAQPYRITFFYP
Ga0210114_10473443	3300025795	Natural And Restored Wetlands	VNELVTTRTKAAEEPRVARRGLRVLTVEAIGPVTILGGIVWAFAQPYRVTF
Ga0207642_107692141	3300025899	Miscanthus Rhizosphere	VNELVTPRTKAAEEPRAARQGIRVLAVEALGPLTVLGGIVWAFAQPYRVTFFYPDGKGVWEWLVQPP
Ga0207645_108019471	3300025907	Miscanthus Rhizosphere	VAVNELVTSRAQPADQPRTARKTLRVVAVEALGPLTILGGIVWA
Ga0207660_104726202	3300025917	Corn Rhizosphere	VNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYPDGKGFWDWAV
Ga0207662_105881562	3300025918	Switchgrass Rhizosphere	MRYGADLARGTSDVNEFVTSRAESAGQARSARKMVRVVAVEALGPLTILGGIVWAFAQPYRVTFFYP
Ga0207646_112987151	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VNELVTSRTKAAVRARASRRGLRVLAVEALGPLTVLGGIVWAFAQPYRVTFFY
Ga0207659_109006252	3300025926	Miscanthus Rhizosphere	VNELVTSRANPAEQARTLRRGSRILAVEALGPITVLGGI
Ga0208420_10130761	3300026028	Natural And Restored Wetlands	VNELVTTRTKAAEEPRVARRGLRVLTVEAIGPVTILGGIVWAFAQPYRVTFFYPEGKGAWDWFV
Ga0207675_1020535721	3300026118	Switchgrass Rhizosphere	VAVNELVTSRAQPADQPRTARKTLRVVAVEALGPLTILGGIVWAFAQPYRIT
Ga0207698_114993311	3300026142	Corn Rhizosphere	VNELVTSRAKAAVRSRATRRGIRVLAVEALGPLTVLGGIVWAFAQPYRVTFFY
Ga0247823_103285312	3300028590	Soil	VNELVTSRARAAVRARATRRGLRVLAVEALGPLTVLGGI
Ga0247823_103914212	3300028590	Soil	VNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYPDGKGFWDWAVQ
Ga0247823_109889982	3300028590	Soil	VNELVTPRTNAAEESLAERRGMRVLAIEALGPLTVLGGIVWAFAQPYRVTFFYPDG
Ga0247821_100143876	3300028596	Soil	VNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYPDGKGFWDWAVQPPL
Ga0247821_108598582	3300028596	Soil	VNELVTSRAKPAEQARTLRRGFRVLAVEALGPITVLGGIVWAFAQPY
Ga0247820_101607873	3300028597	Soil	VNELVTPRTNAAEESLAERRGMRVLAIEALGPLTVLGGIVWAFAQPYRVTFF
Ga0247824_109541051	3300028809	Soil	VNELVNPRRQPVDEPRTARTGFRVVAVEALGPLTALGGIVWALAQPYRVT
Ga0247827_103913161	3300028889	Soil	VNELVTPRTNAAEESLAERRGMRVLAIEALGPLTVLGGIVWAFAQPYRVTFFYPDGKGIWEWLVQPPLL
Ga0247826_102215033	3300030336	Soil	VNELVTPRTKAAEEPRAARQGIRVLAVEALGPLTVLGGIVWAFAQPYRVTFFYPDGKGV
Ga0247826_106664531	3300030336	Soil	VNELVTPRTQTAEEPRVARRSFRVLVVEALGPLTVLGGIVWALAQ
Ga0310887_102458511	3300031547	Soil	VNELVTSRAKAAVRSRATRRGIRVLAVEALGPLTVLGGIVWA
Ga0307408_1009567602	3300031548	Rhizosphere	VNELVTSRAEPAERSRTLRRGIRVLAVEALGPLTVLGGIVWA
Ga0310813_116321562	3300031716	Soil	VNEFVTSRTKAAVLARASRRGLRVLAVEALGPLTVLGGIVWAF
Ga0310904_106432771	3300031854	Soil	VNELVTSRARAAVRARATRRGLRVLAVEALGPLTVLGGIVWAFAQPYRVTFFYPEGKGFWDWA
Ga0310900_113025202	3300031908	Soil	VNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYR
Ga0310901_103933122	3300031940	Soil	VNELVTSRARAAVRARATRRGLRVLAVEALGPLTVLGGIVWAFAQPYR
Ga0310885_102852611	3300031943	Soil	VNELVTSRARAAVRARATRRGLRVLAVEALGPLTVLGGIVWAFAQPYRVTFF
Ga0373950_0144517_3_215	3300034818	Rhizosphere Soil	VEAPANVNELVTPRAESAGRSRTARQTFRVVAIEALGPLTILGGIVWALAQPYRVTFFYPDGKGFWDWAVQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102421

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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