Metagenome / Metatranscriptome Family F102387

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102387
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	93 residues
Representative Sequence	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Number of Associated Samples	90
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.30 %
% of genes near scaffold ends (potentially truncated)	30.69 %
% of genes from short scaffolds (< 2000 bps)	84.16 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.287 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (26.733 % of family members)
Environment Ontology (ENVO)	Unclassified (73.267 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (54.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.58% β-sheet: 47.37% Coil/Unstructured: 41.05%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01503	PRA-PH	40.59
PF02223	Thymidylate_kin	17.82
PF08861	DUF1828	6.93
PF01612	DNA_pol_A_exo1	1.98
PF02867	Ribonuc_red_lgC	0.99
PF00476	DNA_pol_A	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	17.82
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.99
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.23 %
Unclassified	root	N/A	22.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.29 %
Unclassified	root	N/A	22.77 %
Viruses	superkingdom	All Organisms → Viruses	5.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.29 %
Unclassified	root	N/A	22.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.68 %
Unclassified	root	N/A	22.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	34.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	22.77 %
Unclassified	root	N/A	22.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	34.65 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	22.77 %
Unclassified	root	N/A	22.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	34.65 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	22.77 %
Unclassified	root	N/A	22.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.94 %

Name	Rank	Taxonomy	Distribution
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	34.65 %
Methylotenera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera	22.77 %
Unclassified	root	N/A	22.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.94 %

Name	Rank	Taxonomy	Distribution
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	34.65 %
unclassified Methylotenera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera	22.77 %
Unclassified	root	N/A	22.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.94 %

Name	Rank	Taxonomy	Distribution
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	34.65 %
Methylotenera sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	22.77 %
Unclassified	root	N/A	22.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10282210	Not Available	522	Open in IMG/M
3300009175\|Ga0073936_10058140	All Organisms → cellular organisms → Bacteria	3500	Open in IMG/M
3300009502\|Ga0114951_10134688	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1372	Open in IMG/M
3300009518\|Ga0116128_1028265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1872	Open in IMG/M
3300009518\|Ga0116128_1163903	Not Available	632	Open in IMG/M
3300009519\|Ga0116108_1070835	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300009547\|Ga0116136_1038260	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1411	Open in IMG/M
3300009628\|Ga0116125_1090828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	810	Open in IMG/M
3300009629\|Ga0116119_1112756	Not Available	681	Open in IMG/M
3300009635\|Ga0116117_1111394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	689	Open in IMG/M
3300009637\|Ga0116118_1062779	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1299	Open in IMG/M
3300009639\|Ga0116122_1290627	Not Available	502	Open in IMG/M
3300009640\|Ga0116126_1133709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	847	Open in IMG/M
3300009640\|Ga0116126_1203853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	635	Open in IMG/M
3300009641\|Ga0116120_1126452	Not Available	832	Open in IMG/M
3300010339\|Ga0074046_10238965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	1131	Open in IMG/M
3300010341\|Ga0074045_10421912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	863	Open in IMG/M
3300010379\|Ga0136449_100298732	All Organisms → cellular organisms → Bacteria	2938	Open in IMG/M
3300014153\|Ga0181527_1355070	Not Available	567	Open in IMG/M
3300014155\|Ga0181524_10401353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	598	Open in IMG/M
3300014156\|Ga0181518_10449629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	616	Open in IMG/M
3300014159\|Ga0181530_10071286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2168	Open in IMG/M
3300014160\|Ga0181517_10193941	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300014161\|Ga0181529_10134487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	1526	Open in IMG/M
3300014162\|Ga0181538_10201198	All Organisms → cellular organisms → Bacteria → Proteobacteria	1118	Open in IMG/M
3300014167\|Ga0181528_10103802	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1545	Open in IMG/M
3300014199\|Ga0181535_10259627	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1046	Open in IMG/M
3300014492\|Ga0182013_10164134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1382	Open in IMG/M
3300014493\|Ga0182016_10504966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	699	Open in IMG/M
3300014495\|Ga0182015_10000058	All Organisms → cellular organisms → Bacteria	141705	Open in IMG/M
3300014496\|Ga0182011_10044463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	3159	Open in IMG/M
3300014496\|Ga0182011_10797066	Not Available	592	Open in IMG/M
3300014499\|Ga0182012_10273208	All Organisms → cellular organisms → Bacteria → Proteobacteria	1149	Open in IMG/M
3300014502\|Ga0182021_10199263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2338	Open in IMG/M
3300014658\|Ga0181519_10247904	All Organisms → cellular organisms → Bacteria → Proteobacteria	1112	Open in IMG/M
3300014658\|Ga0181519_10811959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	578	Open in IMG/M
3300016701\|Ga0181509_1286447	Not Available	625	Open in IMG/M
3300017929\|Ga0187849_1124388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1066	Open in IMG/M
3300017935\|Ga0187848_10042285	Not Available	2234	Open in IMG/M
3300017941\|Ga0187850_10162500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	1041	Open in IMG/M
3300017988\|Ga0181520_10050213	All Organisms → cellular organisms → Bacteria → Proteobacteria	3981	Open in IMG/M
3300017996\|Ga0187891_1078821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	1293	Open in IMG/M
3300018002\|Ga0187868_1069184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1444	Open in IMG/M
3300018002\|Ga0187868_1235772	Not Available	622	Open in IMG/M
3300018003\|Ga0187876_1123794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	930	Open in IMG/M
3300018005\|Ga0187878_1292704	Not Available	584	Open in IMG/M
3300018008\|Ga0187888_1075714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1476	Open in IMG/M
3300018009\|Ga0187884_10062410	All Organisms → Viruses → Predicted Viral	1705	Open in IMG/M
3300018013\|Ga0187873_1097917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	1166	Open in IMG/M
3300018016\|Ga0187880_1046732	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2336	Open in IMG/M
3300018016\|Ga0187880_1108837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	1354	Open in IMG/M
3300018017\|Ga0187872_10050516	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2227	Open in IMG/M
3300018018\|Ga0187886_1385900	Not Available	513	Open in IMG/M
3300018019\|Ga0187874_10040888	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2213	Open in IMG/M
3300018020\|Ga0187861_10141343	All Organisms → Viruses → Predicted Viral	1119	Open in IMG/M
3300018021\|Ga0187882_1355706	Not Available	558	Open in IMG/M
3300018024\|Ga0187881_10047100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2119	Open in IMG/M
3300018026\|Ga0187857_10044922	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2293	Open in IMG/M
3300018037\|Ga0187883_10522477	Not Available	613	Open in IMG/M
3300018037\|Ga0187883_10633317	Not Available	556	Open in IMG/M
3300018042\|Ga0187871_10162812	All Organisms → Viruses → Predicted Viral	1257	Open in IMG/M
3300018046\|Ga0187851_10215284	All Organisms → cellular organisms → Bacteria → Proteobacteria	1136	Open in IMG/M
3300018047\|Ga0187859_10366075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	788	Open in IMG/M
3300018057\|Ga0187858_10027977	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	4289	Open in IMG/M
3300019787\|Ga0182031_1083719	Not Available	512	Open in IMG/M
3300019787\|Ga0182031_1399839	All Organisms → Viruses → Predicted Viral	1085	Open in IMG/M
3300022555\|Ga0212088_10219736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1478	Open in IMG/M
3300022863\|Ga0224532_1060792	Not Available	503	Open in IMG/M
3300022872\|Ga0224526_1002033	Not Available	6814	Open in IMG/M
3300022875\|Ga0224553_1102461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	566	Open in IMG/M
3300022877\|Ga0224527_1014342	All Organisms → cellular organisms → Bacteria → Proteobacteria	2052	Open in IMG/M
3300023068\|Ga0224554_1071730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	846	Open in IMG/M
3300023088\|Ga0224555_1041933	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300023088\|Ga0224555_1166713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	626	Open in IMG/M
3300023101\|Ga0224557_1282820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	534	Open in IMG/M
3300023228\|Ga0224530_1024209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	790	Open in IMG/M
3300023247\|Ga0224529_1016359	All Organisms → cellular organisms → Bacteria → Proteobacteria	1723	Open in IMG/M
3300023258\|Ga0224535_1020845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1578	Open in IMG/M
3300025460\|Ga0208562_1071961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	710	Open in IMG/M
3300026456\|Ga0255351_1032013	All Organisms → Viruses → Predicted Viral	1202	Open in IMG/M
3300027854\|Ga0209517_10246129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1073	Open in IMG/M
3300028087\|Ga0255354_1083679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	590	Open in IMG/M
3300028268\|Ga0255348_1068187	Not Available	618	Open in IMG/M
3300028572\|Ga0302152_10070059	All Organisms → Viruses → Predicted Viral	1093	Open in IMG/M
3300028574\|Ga0302153_10096240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	1006	Open in IMG/M
3300028788\|Ga0302189_10265027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	699	Open in IMG/M
3300028813\|Ga0302157_10307818	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	865	Open in IMG/M
3300028866\|Ga0302278_10121556	All Organisms → cellular organisms → Bacteria → Proteobacteria	1409	Open in IMG/M
3300028873\|Ga0302197_10218078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	883	Open in IMG/M
3300028909\|Ga0302200_10185894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	1051	Open in IMG/M
3300029913\|Ga0311362_10943518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	684	Open in IMG/M
3300029916\|Ga0302148_1152263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	654	Open in IMG/M
3300029917\|Ga0311326_10507594	Not Available	588	Open in IMG/M
3300029939\|Ga0311328_10206989	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1513	Open in IMG/M
3300029954\|Ga0311331_11566078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	534	Open in IMG/M
3300033402\|Ga0326728_10307604	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1438	Open in IMG/M
3300033402\|Ga0326728_10986402	Not Available	585	Open in IMG/M
3300033405\|Ga0326727_10288665	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1633	Open in IMG/M
3300033405\|Ga0326727_10494555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1067	Open in IMG/M
3300033827\|Ga0334848_079949	Not Available	580	Open in IMG/M
3300033891\|Ga0334811_132185	Not Available	624	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	54.46%
Terrestrial	Environmental → Terrestrial	45.54%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	54.46%
Peat	Environmental → Terrestrial → Peat	31.68%
Soil	Environmental → Terrestrial → Soil	13.86%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	51.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	31.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.89%
Lake	Environmental → Aquatic → Freshwater → Lake	2.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.97%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	38.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	31.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	12.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.91%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.98%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	26.73%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	15.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	12.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	11.88%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	11.88%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.95%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.97%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.97%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.99%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022863	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 1-5	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300022875	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 10-14	Environmental	Open in IMG/M
3300022877	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T0	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300023228	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T75	Environmental	Open in IMG/M
3300023247	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T50	Environmental	Open in IMG/M
3300023258	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 30-34	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300028087	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T50	Environmental	Open in IMG/M
3300028268	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v5	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033827	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 5-9	Environmental	Open in IMG/M
3300033891	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-D	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102822101	3300000567	Peatlands Soil	YDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVLSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0073936_100581405	3300009175	Freshwater Lake Hypolimnion	MIYDVRVGALLDGSQEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTITVDHKATIKIITE*
Ga0114951_101346882	3300009502	Freshwater	MIYDVRVGALLDGSQEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQTITVDHKATIKIITE*
Ga0116128_10282653	3300009518	Peatland	MIYDVRVGALLDGSQEIYSIIQGVEAASPEEAANQVVRGFEDGTEGQQEDWWDADEDGCVDWQFDGEHTVEIDPVVGVTQTVTVDHKATIKIITE*
Ga0116128_11639032	3300009518	Peatland	MIYDVRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTITVDHKATIKIITE*
Ga0116108_10708351	3300009519	Peatland	QEIYTVIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTITVDHKATIKIITE*
Ga0116136_10382602	3300009547	Peatland	MIYDVRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0116125_10908283	3300009628	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0116119_11127562	3300009629	Peatland	MIYDVRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0116117_11113941	3300009635	Peatland	ISHYAGNDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTVTVDHKATIKIITE*
Ga0116118_10627793	3300009637	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEATSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0116122_12906271	3300009639	Peatland	RVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0116126_11337091	3300009640	Peatland	RVGALLDGSQEIYSIIQGVEAASPEEAANQVVRGFEDGTEGQQEDWWDADEDGCVDWQFDGEHTVEIDPVVGVTQTVTVDHKATIKIITE*
Ga0116126_12038532	3300009640	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0116120_11264522	3300009641	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0074046_102389652	3300010339	Bog Forest Soil	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTITVDHKATIKIITE*
Ga0074045_104219121	3300010341	Bog Forest Soil	MIYDVQVGALLDGFQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTITVDHKATIKIITE*
Ga0136449_1002987323	3300010379	Peatlands Soil	MIYDVRVGALLDGSQEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0181527_13550701	3300014153	Bog	IYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0181524_104013531	3300014155	Bog	MIYDVRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWKFYGEHTVEIDPVVAVTQAVTVDHKATIKIITE*
Ga0181518_104496291	3300014156	Bog	MIYDVRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0181530_100712861	3300014159	Bog	MIYDVRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTVTVDHKATIKIITE*
Ga0181517_101939413	3300014160	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSPQEAAEQVVRGFENGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTITVDHKATIKIITE*
Ga0181529_101344872	3300014161	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVGWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0181538_102011983	3300014162	Bog	QEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVGWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0181528_101038023	3300014167	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTVTVDHKATIKIITE*
Ga0181535_102596272	3300014199	Bog	MSYDVRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0182013_101641343	3300014492	Bog	MIYDVRVDAVLDGDQEIYANYQGIEAPSAQAAAEQTLRGRFIDGTTGDEGADEEWYDSDNDECVSWGFDGEHSVEINPVVRVTQTVTVDHKATITIITE*
Ga0182016_105049663	3300014493	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQDAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0182015_10000058134	3300014495	Palsa	MIYDVRVGALLDGSQEIYTIIQSVEASSAQDAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFEGEHKVEIDPVVGVTQVVTVDHKATIKIITE*
Ga0182011_100444635	3300014496	Fen	MIYDVRVVALLDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0182011_107970662	3300014496	Fen	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRDFEDGAEGHEEDWYDGDNDECVDWQFDGEHKVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0182012_102732081	3300014499	Bog	MIYDVRVGALLDGSQEIYTIFQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0182021_101992633	3300014502	Fen	MIYDVRVVALLDGSQEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE*
Ga0181519_102479043	3300014658	Bog	YDVRVGALLDGSQEIYAIIQSVEASSAQEAAEQVVRGFEDGADGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTVTVDHKATIKIITE*
Ga0181519_108119592	3300014658	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVVWQFDGEHTVEIDPVVGVTQTV
Ga0181509_12864472	3300016701	Peatland	YDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0187849_11243883	3300017929	Peatland	MIYDVRVGAILDGSQEIYTIIQSVEASSPQEAAEQIVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHKVEIDPVVRVTQAVTVDHKATIKIITE
Ga0187848_100422852	3300017935	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0187850_101625001	3300017941	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0181520_100502135	3300017988	Bog	MIYDVRVGALLDGSQEIYAIIQSVEASSAQEAAEQVVRGFEDGADGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTVTVDHKATIKIITE
Ga0187891_10788214	3300017996	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQTVTVDHKATIKIITE
Ga0187868_10691843	3300018002	Peatland	MSYDVRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTVTVDHKATIKIITE
Ga0187868_12357722	3300018002	Peatland	MIYDVRVGSLLDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0187876_11237943	3300018003	Peatland	MIYDVRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0187878_12927042	3300018005	Peatland	MIYDVRVGALLDGSQEIYAIIQSVEASSAQEAAEQVVRGFEDGADGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTITVDHKATIKIITE
Ga0187888_10757142	3300018008	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGADGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITG
Ga0187884_100624101	3300018009	Peatland	MSYDVRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0187873_10979173	3300018013	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSPQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTVTVDHKATIKIITE
Ga0187880_10467324	3300018016	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0187880_11088372	3300018016	Peatland	MIYDARVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0187872_100505163	3300018017	Peatland	MIYDVRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTITVDHKATIKIITE
Ga0187886_13859001	3300018018	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTVTVDHKATIKIITE
Ga0187874_100408883	3300018019	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVKIDPVVGVTQTITVDHKATIKIITE
Ga0187861_101413433	3300018020	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITG
Ga0187882_13557062	3300018021	Peatland	YDVRVGAFLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0187881_100471003	3300018024	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGPEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0187857_100449223	3300018026	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSPQEAAEQIVRGFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0187883_105224771	3300018037	Peatland	MIYDVRVGALLDGSQEIYTVIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0187883_106333172	3300018037	Peatland	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0187871_101628124	3300018042	Peatland	MSYDVRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWHFDGEHAVEIDPVLGVTQTVTVDHKATIKIITE
Ga0187851_102152841	3300018046	Peatland	VRVGALLDGSQEIYTVIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWHFDGEHAVEIDPVVGVTQTITVDHKATIKIITE
Ga0187859_103660752	3300018047	Peatland	MIYDVRVGAFLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTVTVDHKATIKIITE
Ga0187858_100279771	3300018057	Peatland	RVGALLDGSQEIYSIIQGVEAASVEEAANQVVRGFEDGEEGSEEDWYDADSDECVDWQFDGEHTVEIDPVVGVTQTVTVNHKATIKIITE
Ga0182031_10837192	3300019787	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTITVDHKATIKIITE
Ga0182031_13998391	3300019787	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWHFDGEHAVEIDPVVGVTQT
Ga0212088_102197363	3300022555	Freshwater Lake Hypolimnion	MIYDVRVGALLDGSQEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQTITVDHKATIKIITE
Ga0224532_10607922	3300022863	Soil	LDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHKVEIDPVVGVTQAVTVDHKATIKIITE
Ga0224526_10020336	3300022872	Soil	MIYDVRVGAILDGSQEIYTIIQSVAASSPQEAAEQVVRVFEDGTEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0224553_11024612	3300022875	Soil	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTIT
Ga0224527_10143421	3300022877	Soil	HMIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0224554_10717301	3300023068	Soil	LLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0224555_10419332	3300023088	Soil	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQAVRGFEDGAEGHEEDWYDGDNDECLDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0224555_11667131	3300023088	Soil	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHKVEIDPVVGVTQAVTVDHKATIKIITE
Ga0224557_12828201	3300023101	Soil	RNRTHMIYDVRVGALLDGSQEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0224530_10242091	3300023228	Soil	RNRTQMIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHKVEIDPVVGVTQAVTVDHKATIKIITE
Ga0224529_10163591	3300023247	Soil	QMIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTITVDHKATIKIITE
Ga0224535_10208453	3300023258	Soil	VGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0208562_10719611	3300025460	Peatland	MIYDVRVGALLDGSQEIYSIIQGVEAASPEEAANQVVRGFEDGTEGQQEDWWDADEDGCVDWQFDGEHTVEIDPVVGVTQTVTVDHKATIKIITE
Ga0255351_10320134	3300026456	Soil	MIYDVRVGALLDGSQEIYTIIQSVEASSPQEAAEQVVRGFENGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVD
Ga0209517_102461292	3300027854	Peatlands Soil	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVLSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0255354_10836792	3300028087	Soil	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHKVEIDPVVGVTQAVTVDH
Ga0255348_10681872	3300028268	Soil	MIYDVRVGALLDGSQEIYTIIQSVEASSPQEAAEQVVRGFENGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTITVDHKATIKIITE
Ga0302152_100700591	3300028572	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0302153_100962402	3300028574	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEINPVVGVTQAVTVDHKATIKIITE
Ga0302189_102650271	3300028788	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQ
Ga0302157_103078181	3300028813	Bog	DVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0302278_101215561	3300028866	Bog	HMIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHKVEIDPVVGVTQAVTVDHKATIKIITE
Ga0302197_102180783	3300028873	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKA
Ga0302200_101858941	3300028909	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITELA
Ga0311362_109435182	3300029913	Bog	MIYDVRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHKVEIDPVVGVTQAVTVDHKATIKIITE
Ga0302148_11522633	3300029916	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVEWQFDGEHTVEIDPVVGVTQTITVDHKATIKIITE
Ga0311326_105075942	3300029917	Bog	DGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHKVEIDPVVGVTQAVTVDHKATIKIITE
Ga0311328_102069892	3300029939	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQGAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0311331_115660782	3300029954	Bog	MIYDVRVGALLDGSQEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKII
Ga0326728_103076043	3300033402	Peat Soil	MIYGVRVGALLDGSQEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVGWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0326728_109864022	3300033402	Peat Soil	MIYDVRVGALLDGSQEIYTIIQSVEASSPQEAAEQIVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHKVEIDPVVRVTQAVTVDHKATIKIITE
Ga0326727_102886654	3300033405	Peat Soil	MIYGVRVGALLDGSQEIYTIIQSVEASSAQGAAEQVVRSFEDGAEGHEEDWYDGDNDECVGWQFDGEHTVEIDPVVGVTQAVTVDHKATIKIITG
Ga0326727_104945553	3300033405	Peat Soil	MIYDVRVGALLDGSQEIYAIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0334848_079949_298_573	3300033827	Soil	VRVGAILDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWKFDGEHTVEIDPVVGVTQAVTVDHKATIKIITE
Ga0334811_132185_361_618	3300033891	Soil	LDGSQEIYTIIQSVEASSAQEAAEQVVRGFEDGAEGHEEDWYDGDNDECVDWQFDGEHTVEIDPVVGVTQTITVDHKATIKIITE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102387

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences