NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F102370

Metagenome / Metatranscriptome Family F102370

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F102370
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 88 residues
Representative Sequence VHDLNPDCISKNPNLTIIFFHGITYGIDDDWKRTWTTRPIDGKEECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDV
Number of Associated Samples 15
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 40.00 %
% of genes near scaffold ends (potentially truncated) 15.84 %
% of genes from short scaffolds (< 2000 bps) 5.94 %
Associated GOLD sequencing projects 13
AlphaFold2 3D model prediction Yes
3D model pTM-score0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (89.109 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated
(98.020 % of family members)
Environment Ontology (ENVO) Unclassified
(98.020 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant corpus
(98.020 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 7.34%    β-sheet: 5.50%    Coil/Unstructured: 87.16%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.20
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF00931NB-ARC 5.94
PF13855LRR_8 0.99
PF13306LRR_5 0.99



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A89.11 %
All OrganismsrootAll Organisms10.89 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300009500|Ga0116229_10034121All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida5551Open in IMG/M
3300009500|Ga0116229_10046841All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida → Dicranidae → Pseudoditrichales → Ditrichaceae → Ceratodon → Ceratodon purpureus4385Open in IMG/M
3300009500|Ga0116229_10047108Not Available4367Open in IMG/M
3300009500|Ga0116229_10071165Not Available3270Open in IMG/M
3300009500|Ga0116229_10074580All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida → Dicranidae → Pseudoditrichales → Ditrichaceae → Ceratodon → Ceratodon purpureus3169Open in IMG/M
3300009500|Ga0116229_10270491Not Available1442Open in IMG/M
3300009510|Ga0116230_10060239Not Available3418Open in IMG/M
3300009510|Ga0116230_10061657All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida → Dicranidae → Pseudoditrichales → Ditrichaceae → Ceratodon → Ceratodon purpureus3370Open in IMG/M
3300009510|Ga0116230_10066622Not Available3213Open in IMG/M
3300009510|Ga0116230_10074082All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida → Dicranidae → Pseudoditrichales → Ditrichaceae → Ceratodon → Ceratodon purpureus3005Open in IMG/M
3300009510|Ga0116230_10123822Not Available2179Open in IMG/M
3300009697|Ga0116231_10010644All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis riparia14636Open in IMG/M
3300009697|Ga0116231_10047990All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida → Dicranidae → Pseudoditrichales → Ditrichaceae → Ceratodon → Ceratodon purpureus3150Open in IMG/M
3300009697|Ga0116231_10067057Not Available2412Open in IMG/M
3300009697|Ga0116231_10071278All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida → Dicranidae → Pseudoditrichales → Ditrichaceae → Ceratodon → Ceratodon purpureus2300Open in IMG/M
3300009697|Ga0116231_10143981Not Available1401Open in IMG/M
3300009701|Ga0116228_10037015Not Available4030Open in IMG/M
3300009701|Ga0116228_10081223All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida → Dicranidae → Pseudoditrichales → Ditrichaceae → Ceratodon → Ceratodon purpureus2463Open in IMG/M
3300009701|Ga0116228_10181787Not Available1513Open in IMG/M
3300009787|Ga0116226_10171021Not Available2261Open in IMG/M
3300009787|Ga0116226_10292119Not Available1680Open in IMG/M
3300009787|Ga0116226_10296817Not Available1665Open in IMG/M
3300009787|Ga0116226_10354205Not Available1505Open in IMG/M
3300027807|Ga0209208_10038137All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida → Dicranidae → Pseudoditrichales → Ditrichaceae → Ceratodon → Ceratodon purpureus4579Open in IMG/M
3300027807|Ga0209208_10059239All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida → Dicranidae → Pseudoditrichales → Ditrichaceae → Ceratodon → Ceratodon purpureus3128Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated98.02%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300009500Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009510Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009697Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009701Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009787Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300010185Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fa - Sphagnum fallax MT (Eukaryote Community Metatranscriptome)Host-AssociatedOpen in IMG/M
3300010192Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fc - Sphagnum fallax MT (Eukaryote Community Metatranscriptome)Host-AssociatedOpen in IMG/M
3300010198Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MT (Eukaryote Community Metatranscriptome)Host-AssociatedOpen in IMG/M
3300010199Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fd - Sphagnum fallax MT (Eukaryote Community Metatranscriptome)Host-AssociatedOpen in IMG/M
3300010200Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MT (Eukaryote Community Metatranscriptome)Host-AssociatedOpen in IMG/M
3300019270Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027807Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)Host-AssociatedOpen in IMG/M
3300027860Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)Host-AssociatedOpen in IMG/M
3300030626Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0116229_1000607243300009500Host-AssociatedMYDLNPNCTSNNSSLTIIFFHGIVYGINDEWKGTWTTRPIDGSQKCICWPQMWIPKDLNDNVRILSLSYDSNDVANVHNDVREIGRNFIQSLVTDSRCEQSP*
Ga0116229_1003412113300009500Host-AssociatedVHDLNPDCTSKNPNLTIMVFHGITYGIDDAWKQTWTTCPINGKEECICWPQMWIPKDLNDNVKILSLSYDSNVVARVHNDVTEIG*
Ga0116229_1004684143300009500Host-AssociatedVHDLNPTCNSNNPKLTIIFFHGIAFGTNDEWKETWTTYPPNNREECICWPEKWLPEDLNNNVRILSLSYDSNIVASVHNDVTEIGKNL
Ga0116229_1004710843300009500Host-AssociatedVHDLNLDCTSNNPSLTIIFFHGIVYGVNDEWKETWTIRPVDGREECICWPQMWIPNDLNDNVRILSLSYDSSVVASVHMDVTEIGRNFVQSLVTRCEQSP*
Ga0116229_1007116533300009500Host-AssociatedMHDLNPDCSSKNTNLTIIFFHGIVKGIDDDWKQTWTTRPIDGNEKCICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVTEIG
Ga0116229_1007458013300009500Host-AssociatedVHDLNPDCISKNPNLTIIFFHGITYGIDDDWKRTWTTRPIDGKEECICWPQMWIPKDLNDNVKILSLSYDSNV
Ga0116229_1027049113300009500Host-AssociatedVHDLNPHCTSKNPSLTIIFFHGIACGIHDDWKRTWTTRPIDGNEKCICWPQMWITKDLNDNVKILSLSYDSNVVASVHNDVTEIGQNLIQSLVTNSRCDNL
Ga0116229_1041907113300009500Host-AssociatedVHDLNPTCNSNNPNLTIIFFHGIAFSTNDEWKETWTTYPTNNRKECVCWPEKWLPEDLNNNVRILSLSYDSKIVASVH
Ga0116229_1075247513300009500Host-AssociatedMNLVDISFFLLQKYPMHDLNPDCTSKNPKLTIIFFHGITYGIDDAWKQTWTTRPIDGKEECICWPQMWIPKDLNDNVKIL
Ga0116229_1135514413300009500Host-AssociatedVHDLNLDCTSKNPNLTIIFFHGIINGIDDAWKQTWTTRPIDGKEECICWPQMWIPKDLNDNVKILSLSYDSNGVASVHNDVTEIGQNLIQSLVTDSRCD
Ga0116229_1143106313300009500Host-AssociatedVHDLNPTCNSNNPNLTIVFFHGIALGTNDEWKETWTTCPTNNREECICWLEKWLPEDLNNNVRILSLSYDSKIVASVHNDVIGIGKN
Ga0116230_1006023913300009510Host-AssociatedVHDLNPTCNSNNPDLTIVFFHGIAFGTNNEWKETWTTHPTNNREECICWPEKWLPEDLNNNVRILSLSYDSNIVASVHND
Ga0116230_1006165733300009510Host-AssociatedVHDLNPNCTSKNPNLTIIFFHGISKEIDDNWKQTWTTRPIDGKEECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVIEIGRNLIQSLVTNLRCVIISISMGILIFILCFN*
Ga0116230_1006662233300009510Host-AssociatedVHDLNPNCTSNNPRLTIIFFHGIVYGINDEWKETWTTRPIDGSQECICWPQMWIPHDLTDNVRILSLSYDYSVLASVHEDVTEIGKKAAQSLVIRYEQFP*
Ga0116230_1007408243300009510Host-AssociatedVHDLNPNCTSNNPSLTIIFFHGIAYGINDEWKETWTTRPIDGSQKCICWPQMWIPKDLNDNVRILSLSYDSSVVASVHKDVTEIGKKVVQNLVIRCEQSP*
Ga0116230_1010101153300009510Host-AssociatedVHDLNPTCNSNNPNLTIVFFHGIAFGTNDEWKETWTTCHLNSTEECICWPEKWLPEDLNNDVRILSLSYDSKIVASVHNDVIGIGK
Ga0116230_1011402323300009510Host-AssociatedVHDLNPDCISKNPNLTIIFFHGITYGIDDDWKQTWTTRPIDGQEECICWPQMWSAKDLNDNVRILSLSYDSNVVASVHNDVAEIGQNLIQSLVTNSRCDNFLI
Ga0116230_1012382213300009510Host-AssociatedVHDLNPDCISKNPNLTIIFFHGITYGIDDDWKQTWTTRPIDGQEECICWPQMWIAKDLNDNVKILSLSYDSNVVASVHNDVAEIG
Ga0116230_1018130223300009510Host-AssociatedVHDLNHDCISKNPNLTIIFFHGITYGTNDEWKETWTTRPIDGHQKCICWPRMWIPKDLNDNVRILSLSYDSNVVASVHNDVTEIGHNFIQSLVINSRCEQSP*
Ga0116230_1026926713300009510Host-AssociatedVHDLNFDCTSKEPNSTIIFFHGIAYGIDNDWRQTWTTRPVDGKEKCICWPQMWIPRDLNDNVKILSLSYDSNVVASVHNDVIEIG*
Ga0116230_1031206823300009510Host-AssociatedVHDLNPNHTSKNPNLTIIFFHGIVYGIDDNWKQTWTTRPMDNKEECICWPQMWIPKDLNDNVKILSLSYDSNVVASVH
Ga0116230_1038243923300009510Host-AssociatedVHDLNPTCNFDNPNLTIIFFHGIAFGTNDEWKETWTTHPATNKKECICWPEKWLPEDLNNNVRILSLSYDSNIVASV
Ga0116230_1041021313300009510Host-AssociatedVLTFFSFSLQEYIVHDLNPTCNSDNPNLTIIFFHGIAFGINDEWKETWTTYPTNNKKECICWPQKWLPEDLNNNVRILSLSYDSNIVASVHNDVTEIGK
Ga0116230_1075957513300009510Host-AssociatedMHDLNINCISNNMSFTISFFQGITYGINDEWKETWTTCPIDGNQKCICWAQMWIPKDLNDNVRILSLSYDSNVVASVHKD
Ga0116230_1087107513300009510Host-AssociatedVHDLNPGYTSKNPNLTIIFFHGIAYGTNDDWKQTWTTRPIDGKEECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVTEIGRNLIQSLVINSRCDNFLIYGH
Ga0116230_1113094713300009510Host-AssociatedMHDLNPTCKSNNPNLTIIFFHGITFGTNDAWKETWTTRPTDNREECICWPEKWLPEDLDNNVRILSLSYDSN
Ga0116230_1125725013300009510Host-AssociatedVHDLNPNCISKNLNLTIIFFHGIIYGTHDDWKQTWTTRPTDGKEECICWPKMWIAKDLNENVKILSLSYDSNVVDGVHNDVTEIGR
Ga0116230_1131981013300009510Host-AssociatedVHDLNPNCTSKNPNLTIIFFHGILKEIDDNWKQTWTTRPFDGKEECICWPQMWIPEDLNDNVKILFLSYDSNVVASVHNDVIEIGRNLIQSLVTN
Ga0116231_1001064423300009697Host-AssociatedVYDLNPNCTSNNPSLTVIFFHGIVYGINDNWKETWTTHPIDGSQKCICWPQMWIPKDLNDNVRILSLSYDSNVVASVHNDVTEIGRNFIQNLVTDSRCEQSP*
Ga0116231_1004799023300009697Host-AssociatedVHDLNPDCISKNPNLTIIFFHGITYGIDDDWKRTWTTRPIDGKEECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDV
Ga0116231_1006705733300009697Host-AssociatedVHDLNPENTSKNPNLTIIFFHGIIYGIDDDWKQTWTTRPINGKEECICWPQMWIPKDLNDNVKILSLSYDSNVVASV
Ga0116231_1007127833300009697Host-AssociatedVHDLNPDCISKNTNLTIIFFHGIVKGTDEDWKQTWTTCPIDGNGECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVTEIG
Ga0116231_1014398123300009697Host-AssociatedVHDLNPNCTSKNPNLTIIFFHGITYGTDDDWKQTWTTRPIDGKEECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVTEIGKNLI
Ga0116231_1047307913300009697Host-AssociatedVHDLNPTCNSDNPDLTIIFFHGIIFGTNDEWKEIWTTCPTNNKEECICWPEKWLPEDLNNNVRILSLSYDSNIVASVHNDVTEIG
Ga0116231_1056979313300009697Host-AssociatedVHDLNPDCSSKNPNLTIIFFHGLIYGIDDAWKQTWTTHCVDGKEECICWPQMWIPKDLNDNVKILSLSYDSNVATSVHNDVTEIGQNLIQSLVTNSRCDNFLIY
Ga0116228_1003701513300009701Host-AssociatedVHDLNPDCTLVNPNLTIIFFHGIAYGIDDDWKQTWTTRPMNRTEECICWPQMWIAKDLNDNVKILSLSYDSNVVASVHNDV
Ga0116228_1007020043300009701Host-AssociatedVHDLNPDCISKNPNLTIIFFHGITYGIDDDWKQTWTTRPIDGQEECICWPQMWIAKDLNDNVKILSLSYDSNVVASVHNDVAEIGQNLIQSLVTNSRCDNFLI
Ga0116228_1008122323300009701Host-AssociatedVHDLNPNYTSKHPNLTIIFCHGIDYAIDDNWKQTWTTRPVDDKEECICWPQMWIPKDLNDNVKILSLSYDSNVVTSFYNDMTEIGQNLIQSLVTNSRCEQFL*
Ga0116228_1009673953300009701Host-AssociatedVHDLNPTCNSNSPNLTIIFFHGITLGTNDEWKETWTTCPTNNKKECICWPEKWLPEDLNNNVRILSLSYDSNIVASVHNDVTEI
Ga0116228_1018178713300009701Host-AssociatedVQDLNPDCTSKNPNLTIIFFHGIAYGIDDDWKKTWTTRFIDGEEECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVTEIGRNLIQSLVIDSRCDNFLIY
Ga0116228_1029733413300009701Host-AssociatedVHDLNPNYISKNLNLTIIFFHGITFGINDEWRETWTTRPINDTEKCICWPQMWIPKDLNDNVRILSLSYDSNVVASVHNDVTEIGKNLIQSLVI
Ga0116228_1033039313300009701Host-AssociatedVHDLNPTCNSNNPKLTIVFFHGIAFGTNDEWKETWTTCPPNNREECICWPEKWLPEDLNNNVRILSLSYDSNI
Ga0116228_1037393213300009701Host-AssociatedVHDLNPTCNSSNPNLTIVFFHGIAFGTNDEWKETWTTCPPKNREECICWPEKWLPEDLNNNVRILSLSYDSNIVASVHNDVT
Ga0116228_1041680513300009701Host-AssociatedVDDLNPGYTSKNPNLTIIFFHGIAYGTNDDWKQTWITCPIDNKGECICWPQMWIPKDLNDNVKILSLSY
Ga0116228_1047483013300009701Host-AssociatedLQKHPVHDLNPECISKHPNLTIIFFHGIAYGSDDDWKQTWTTHPIDGKEECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDV
Ga0116228_1054368113300009701Host-AssociatedVHDLNPDCISKNPNLTIIFFHGIAYGIDDDWKQTWTTRPIHGQEECICWPQMWIAKDLNDNVKILSLSYDSN
Ga0116228_1056471313300009701Host-AssociatedVHDLTPDCTSKNPNLTTIFFHGIADGIDDDWKQTWTTRPIDNKEECICWPQMWIPTDLNGNVKILSLSYD
Ga0116228_1091739213300009701Host-AssociatedVHDLTPNCTSKNPNLTIIFFHGIVYGIDDNWKQTWTTRPMNDKEECICWPQMWIPKDLNDNVKILSLSYDSNVGTSVHNDVTEIG
Ga0116228_1091977513300009701Host-AssociatedVHDLNPTCNSNNPNLTIVFFHGIAFGTNDEWKETWTTCHLNSTEECICWPEKWLPEDLNNDVRILSLSYDSKIVASVHNDVIG
Ga0116228_1102648513300009701Host-AssociatedVHDLNPDCTSKNPNLTIIFFHGIINGIDDNWKQTWTTRPIDGKEECICWPQMWIPKDLNDNVKILSLSYD
Ga0116228_1116687313300009701Host-AssociatedVHDLNPTSKNPNMTIIFFHGITYGIDDNWKQTWITRPMDDKEECICWPQMWIPKDLNDNVKILSLSYDSNVVTSVHNDVIEIGRNLIQSLVID
Ga0116227_1018657523300009709Host-AssociatedVHDLNPTCNSNNPNLTIVFFHGIAFGTSDEWKETWTTCPTNNREECICWPEKWLPEDLNNNVRILSLSYDSNIVASVHNDVTEI
Ga0116227_1046318413300009709Host-AssociatedMNLVDISFFLLQKYPVHDLNPDCTSKNPNLTIIFFHGLIYGIDDAWKQTWTTHCIDGKEECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVTEIGQNL
Ga0116227_1099535613300009709Host-AssociatedMHDLNPDCSSKNTNLTIIFFHGIVKGIDDDWKQTWTTRPIDGNEKCICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVTEIGRNLIQSLVTNS
Ga0116226_1017102113300009787Host-AssociatedMNLVDITFLFLLQKYPVHDLNPNCTSKNPNLTIIFFHGIADGSDDDWKQTLTTCPINGKEESICWPQMWIPKDLNDNVKI
Ga0116226_1027793723300009787Host-AssociatedMNLFDICFPLPLQIDPVHDLNPDCTSKNPNLTIIFFHGIAYGINDEWKETWTTRSNDGREKCICWPQMWIPKDLNDNVRILSLSY
Ga0116226_1029211913300009787Host-AssociatedMNLVDIFFLLQKYPVHDLNPDCISKNPNLTIIFSHGIIYGIDDDWKQTWTTRPIDGKEECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVT
Ga0116226_1029681723300009787Host-AssociatedMNLVDISFFLFQKYPVHDLSPDCTSKNPNLTIIFFHGLIYGIDDAWKQTWTTHRIDGKEECICWPQMWIPKDLNDNVKI
Ga0116226_1034639823300009787Host-AssociatedVHDLNPDCILVNPNLTIIFFHGIAYGIDDDWKQTWTTRPMNRTEECICWPQMWIAKDLNDNVKILSLSYDSNVVASVHNDVTEIGRNLIQSL
Ga0116226_1035420513300009787Host-AssociatedMFLFSLLQKYPVHDLNPDCTSKNPNLTIIFFHGIIYGINDEWKQTWTTRPIDGKEECICWPQMWIPKDLNDNVKILSLSYDS
Ga0116226_1041804013300009787Host-AssociatedVHDLYLDCTSKNPNLTIIFFHGFAYGINDEWKETWTTRSIDGREKCICWPQMWIPKDLNDNVRILSLSYDSNVVASVHNDVTE
Ga0116226_1055904713300009787Host-AssociatedVLTFFSFSLQEYIVHDLNPTCNSDNPNLTIIFFHGIAFGINDEWKETWTTYPTNNKKECICWPQKWLPEDLNNNVRILSLSYDSNIVA
Ga0116226_1058408313300009787Host-AssociatedVHGLNPNCTSKNPNLTIIFFHGIAYGIYNEWKETWTTHPINRKEKCICRPHVWIPKDLDENVMILSLSYDYNVVTSVHNDMTKIGQKPHSKGYGFKVC*
Ga0116226_1061313013300009787Host-AssociatedVHDLNPTCNSNNPNLTIVFFHGIAFGTNDEWKETWTTCPLNNKEECICWPEKWLPEDLNNNVRILSLSYDSNIVASVHNDVTE
Ga0116226_1098574913300009787Host-AssociatedVHDLNPTCNFDNPNLTIIFFHGIAFGTNDEWKETWTTHPATNKKECICWPEKWLPEDLNNNVRILSLSYDSNIVASVHND
Ga0116226_1106451113300009787Host-AssociatedVHDLNPTCNSNNPNLTIIFFHGIAFGTNDEWKETWTTLPTNNREESICWPEKWLPNDLNDNVRILSLSYDSNIVASVHNDVTE
Ga0116226_1128880713300009787Host-AssociatedVHDLNPDCTSKNLNLTIIFFHGIIYGIDDNWKQTWTTRPIDGKKECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVTEI
Ga0116226_1150339013300009787Host-AssociatedVQDLNPDCTSKNPNLTIIFFHGITHGIDDDWKKTWTTRFIDGEVECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVTEI
Ga0116226_1168035913300009787Host-AssociatedMNLFDISFFFSLQRYPVNDLNPDCTSENPNLTIIFFHGITNGINDEWKETWTTRSIDGTEKCICWPQMWIPKDLNDNVRILSLSYDSNVAA
Ga0116226_1172753813300009787Host-AssociatedMNLFDVSFSFSLQRYPVNDLNPNCASENPNLTIIFFHGIANGINDEWKETWTTRSIDGVEKCICWPQMWIPKDLNDNVRILSLSYDS
Ga0116226_1195209513300009787Host-AssociatedVHDLNPTCKSDNPSLTIIFFHGITVGTNDEWKETWTTCPTNNREECICWPEKWLPEDLNNNVRILSLSY
Ga0116226_1198727813300009787Host-AssociatedVHDLNPNCTSKNPNLTIIFFHGITYGIDDNWKQTWTTHPMDDKEECICWPQMWIPKDLNDNVKILSLSYDSNVVTSVHNDVTE
Ga0127504_101126113300010185Host-AssociatedMNLVDISFFLLQKYIVHDLNPNCTSKNPKLTTIFFHGITYGIDDNWKQTWTTRPINDKEECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVTEIGRNLIQSLVIDSR
Ga0127504_109092813300010185Host-AssociatedVHDLNPDCISKNLNLTIIFFHGITYGIDDGWKQTWTTRSMDGKEECIWWPKMWITQDLNDNVKILSLSYDSNVVASVHNDVTEIGQN
Ga0127506_112027613300010192Host-AssociatedMHDLNPTCKSNNPNLTIIFFHGITFGTNDAWKETWTTRPTDNREECICWPEKWLPEDLDNNVRILSLSYDSNIVASVHNDVIGIG
Ga0127506_113343313300010192Host-AssociatedVHDLNPDCISKNPNLTIIFFHGITYGIDDDWKQTWTTRSMDGKEECICWPEMWITQDLNDTVKILSLSYNSNVVASVHEDVTEIGQNLIQSLVTDSR
Ga0127509_100774313300010198Host-AssociatedVHDLNPDCISKNPNLTIIFFHGIAYGIDDDWKQTWTTRLMDGKGECICWPQMWIPKDLNDNVRILSLSYDSNVEASVHNDVTEIGQNLIQSLVTDSR
Ga0127509_104288423300010198Host-AssociatedVHDLNPTCNSNNPNLTIVFFHGIAFGTNDEWKETWTTCPPNNREENICWPEKWLPEDLNNNVRILSLSYDSNIVASVHNDVTEIGKNL
Ga0127509_108904223300010198Host-AssociatedMNLVDISFFLLQKYPVHDLNPDCTSKNPNLSIIFFHGLIYGIDDAWKQTWTTHCIDGKKECICWPQMWIPKDLNDNVKILSLSYDSNVAASVHNDVTEIGRNLIQSLVTDSR
Ga0127509_112019013300010198Host-AssociatedVHDLNPDCTSKNPNLTIIFFHGIAYGINDEWKETWTTRSIDGREKCICWPQMWIPKDLNDNVRILSLSYDSNVVASVHNDVIQIGKNLVQSLVINS
Ga0127509_123638313300010198Host-AssociatedVHDLNPNCTSKNPNLTIIFFHGITYGTDDDWKQTWTTRPIDGKEECICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVTEIGKNLIQSLVIDSR
Ga0127508_114381613300010199Host-AssociatedVHDLNPTCNFDNPNLTIIFFHGIAFGTNDEWKETWTTHPATNKKECICWPEKWLPEDLNNNVRILSLSYDSNIVASVHNDVTEI
Ga0127508_114551323300010199Host-AssociatedMTFICESCKIDLKYLVHDLNPTCNSDNPNLTVIFFHGIAFGTNDEWKETWTTCPTNNREECICWPEKWLPEDLNNNVRILSLSYDSNIVASVHNDV
Ga0127507_103991813300010200Host-AssociatedVHDLNPHCTSKNPSLTIIFFHGIACGIHDDWKRTWTTRPIDGNEKCICWPQMWITKDLNDNVKILSLSYDSNVVASVHNDVTEIGQNLIQSLVTNSRCDN
Ga0181512_130562013300019270PeatlandVHDLNPDCTSKNPNLTIIFFHGIAYGINDEWKETWTTRSINGRKKCICWPQMWIPKDLNDNVRILSLSYDSNVVASVHNDVTEIG
Ga0209208_1003813743300027807Host-AssociatedVHDLNPNCTSNNPRLTIIFFHGIVYGINDEWKETWTTRPIDGSQECICWPQMWIPHDLTDNVRILSLSYDYSVLASVHEDVTEIGKKAAQSLVIRYEQFP
Ga0209208_1005546513300027807Host-AssociatedVHDLNPTCNSNNPDLTIVFFHGIAFGTNNEWKETWTTHPTNNREECICWPEKWLPEDLNNNVRILSLSYDSNIVASVHNDV
Ga0209208_1005923923300027807Host-AssociatedVHDLNPNCTSNNPSLTIIFFHGIAYGINDEWKETWTTRPIDGSQKCICWPQMWIPKDLNDNVRILSLSYDSSVVASVHKDVTEIGKKVVQNLVIRCEQSP
Ga0209208_1016317113300027807Host-AssociatedVHDLNFDCTSKEPNSTIIFFHGIAYGIDNDWRQTWTTRPVDGKEKCICWPQMWIPRDLNDNVKILSLSYDSNVVASVHNDVIEIG
Ga0209208_1017680823300027807Host-AssociatedVHDLNPDCTSKNPNLTIILFHGIGYGIDDDWKQTWTTRPIDAEEECICWPQMWITEDLNDDVKILSLSYDVASLHNNVTEIGR
Ga0209208_1028220413300027807Host-AssociatedFFLQKYPVYDLNPNCTSNNPSLTIIFFHGIVYGINDEWKETWTTRPIDDSQKCICWPQMWIPKDLNDNVRILSLSYDSNVVANVHNDVTKIGRNFIQSLVTDSRCEQSP
Ga0209208_1033300613300027807Host-AssociatedMNLFDISFSFSLQRYPVHDLNPNCASKNPNLTIIFFHGIAYGINDEWKETWTTRYINGKEKCICWPQMWIPEDLNDNVRILSLSYDSNVVASVHNDVTEIG
Ga0209208_1038140523300027807Host-AssociatedVHDLNPTCNSNNPNLTIVFFHGITFGTNDEWKETWTTCPTNNREECICWPEKWLPEDLNNNVRILSLSYDSNIVASVH
Ga0209611_1002511673300027860Host-AssociatedMHDLNPDCSSKNTNLTIIFFHGIVKGIDDDWKQTWTTRPIDGNEKCICWPQMWIPKDLNDNVKILSLSYDSNVVASVHNDVTEI
Ga0209611_1007432513300027860Host-AssociatedVHDLNPTCNSDNPNLTIIFFHGIIFGTNDEWKETWTTRPTNNEDECICWPKQWLPEDLNNNVRILSLSYDSNIVASVH
Ga0209611_1009594243300027860Host-AssociatedVHDLNPTCNSNNPNLTIVFFHGIALGTNDEWKETWTTCPTNNREECICWLEKWLPEDLNNNVRILSLSYDSKIVASVHNDVIGIGK
Ga0209611_1018237423300027860Host-AssociatedVHDLNPTCNSNNPNLTIIFFHGIAFSTNDEWKETWTTYPTNNRKECVCWPEKWLPEDLNNNVRILSLSYDSKIVASVHDD
Ga0209611_1024986033300027860Host-AssociatedVHDLNPTCNSNNPNLTIIFFHGIVFGTNDEWKETWTTRPTNNREECICWPKKWLPKDLNNNVRILSLSYDSNIVANVHNDVTEIGKN
Ga0209611_1039674213300027860Host-AssociatedMNLVDISFFLLQKYPMHDLNPDCTSKNPKLTIIFFHGITYGIDDAWKQTWTTRPIDGKEECICWPQMWIPKDLNDNVKI
Ga0209611_1040749513300027860Host-AssociatedMNLVDISFFLLQKYPVHDLNPDCTSKNPNLTIIFFHGLIYGIDDAWRQTWTTHCIDGKEECICWPQMWIPKDLNDNVKILSLSYDSNVVASV
Ga0210291_1096506913300030626SoilMNLVDIFFLLQKYPVHDLNPDCTSKNPNLTIIFFHGIAYGTDDDWKQTWTTRPIDGKEECICWPQMWIAKDLNDNVKILSLSYDSNVVASVHNDVTEIGRNLIQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.