Metagenome / Metatranscriptome Family F102332

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102332
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	56 residues
Representative Sequence	MSRSYRRPFAAITGLASAKSDKQLAHRGVRRKQNLALKTCADYENLLLPHFLECPW
Number of Associated Samples	85
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.01 %
% of genes near scaffold ends (potentially truncated)	94.06 %
% of genes from short scaffolds (< 2000 bps)	89.11 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.475 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (19.802 % of family members)
Environment Ontology (ENVO)	Unclassified (48.515 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (37.624 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.48% β-sheet: 0.00% Coil/Unstructured: 59.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01523	PmbA_TldD	8.91
PF05973	Gp49	7.92
PF13744	HTH_37	7.92
PF13545	HTH_Crp_2	6.93
PF03683	UPF0175	3.96
PF10097	DUF2335	2.97
PF01381	HTH_3	1.98
PF12867	DinB_2	1.98
PF14378	PAP2_3	0.99
PF00383	dCMP_cyt_deam_1	0.99
PF13751	DDE_Tnp_1_6	0.99
PF13592	HTH_33	0.99
PF02371	Transposase_20	0.99
PF01850	PIN	0.99
PF13701	DDE_Tnp_1_4	0.99
PF13460	NAD_binding_10	0.99
PF02604	PhdYeFM_antitox	0.99
PF00027	cNMP_binding	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	8.91
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	7.92
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	7.92
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	3.96
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.99
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.99
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.48 %
Unclassified	root	N/A	47.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.48 %
Unclassified	root	N/A	47.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.48 %
Unclassified	root	N/A	47.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.95 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.99 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	19.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.98 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.99 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.99 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	18.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Verrucomicrobiota incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiota incertae sedis	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.81 %
Methylacidimicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiota incertae sedis → Methylacidimicrobium	0.99 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.99 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	5.94 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	2.97 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.98 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.98 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.99 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.99 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.99 %
Methylacidimicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiota incertae sedis → Methylacidimicrobium	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	5.94 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	2.97 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1.98 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	1.98 %
Terriglobus roseus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus	0.99 %
Flammeovirgaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae	0.99 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.99 %
Methylacidimicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiota incertae sedis → Methylacidimicrobium	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	5.94 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	2.97 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1.98 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	1.98 %
Terriglobus roseus DSM 18391	strain	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus → Terriglobus roseus DSM 18391	0.99 %
unclassified Flammeovirgaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae	0.99 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.99 %
Methylacidimicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiota incertae sedis → Methylacidimicrobium	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	5.94 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	2.97 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1.98 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	1.98 %
Flammeovirgaceae bacterium 311	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium 311	0.99 %
Terriglobus roseus DSM 18391	strain	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus → Terriglobus roseus DSM 18391	0.99 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.99 %
Methylacidimicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiota incertae sedis → Methylacidimicrobium	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005541\|Ga0070733_10322379	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300006052\|Ga0075029_100820302	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300006055\|Ga0097691_1099165	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	857	Open in IMG/M
3300009547\|Ga0116136_1170083	Not Available	549	Open in IMG/M
3300009615\|Ga0116103_1065504	Not Available	986	Open in IMG/M
3300009635\|Ga0116117_1150301	Not Available	599	Open in IMG/M
3300009639\|Ga0116122_1241936	Not Available	560	Open in IMG/M
3300009646\|Ga0116132_1224361	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	571	Open in IMG/M
3300010339\|Ga0074046_10265589	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300010341\|Ga0074045_10254919	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300013092\|Ga0163199_1086740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1339	Open in IMG/M
3300014160\|Ga0181517_10082534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1901	Open in IMG/M
3300014160\|Ga0181517_10113117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1565	Open in IMG/M
3300014160\|Ga0181517_10261329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	922	Open in IMG/M
3300014160\|Ga0181517_10653185	Not Available	524	Open in IMG/M
3300014164\|Ga0181532_10654990	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300014167\|Ga0181528_10832609	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium 311	520	Open in IMG/M
3300014168\|Ga0181534_10219815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	998	Open in IMG/M
3300014168\|Ga0181534_10917815	Not Available	524	Open in IMG/M
3300014168\|Ga0181534_10941818	Not Available	518	Open in IMG/M
3300014201\|Ga0181537_10523084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	811	Open in IMG/M
3300014492\|Ga0182013_10228086	Not Available	1096	Open in IMG/M
3300014498\|Ga0182019_11388602	Not Available	521	Open in IMG/M
3300014499\|Ga0182012_10602862	Not Available	706	Open in IMG/M
3300014655\|Ga0181516_10411991	Not Available	690	Open in IMG/M
3300014838\|Ga0182030_10430794	Not Available	1355	Open in IMG/M
3300014839\|Ga0182027_11595597	Not Available	638	Open in IMG/M
3300016700\|Ga0181513_1184766	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300017925\|Ga0187856_1159238	Not Available	845	Open in IMG/M
3300017941\|Ga0187850_10275630	Not Available	751	Open in IMG/M
3300017946\|Ga0187879_10721520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300017948\|Ga0187847_10896514	Not Available	505	Open in IMG/M
3300017988\|Ga0181520_10622398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	746	Open in IMG/M
3300017996\|Ga0187891_1116888	Not Available	985	Open in IMG/M
3300018004\|Ga0187865_1086630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1170	Open in IMG/M
3300018004\|Ga0187865_1146247	Not Available	832	Open in IMG/M
3300018009\|Ga0187884_10325133	Not Available	621	Open in IMG/M
3300018021\|Ga0187882_1240285	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	703	Open in IMG/M
3300018024\|Ga0187881_10327122	Not Available	633	Open in IMG/M
3300018030\|Ga0187869_10009557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6026	Open in IMG/M
3300018034\|Ga0187863_10124435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1441	Open in IMG/M
3300018034\|Ga0187863_10679370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus → Terriglobus roseus DSM 18391	581	Open in IMG/M
3300018035\|Ga0187875_10075962	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300018043\|Ga0187887_10165338	Not Available	1322	Open in IMG/M
3300018047\|Ga0187859_10420377	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	736	Open in IMG/M
3300018086\|Ga0187769_10878177	Not Available	678	Open in IMG/M
3300018088\|Ga0187771_11857823	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300021181\|Ga0210388_10325665	Not Available	1351	Open in IMG/M
3300021181\|Ga0210388_10934840	Not Available	746	Open in IMG/M
3300022553\|Ga0212124_10008600	Not Available	7237	Open in IMG/M
3300022849\|Ga0224531_1013088	All Organisms → cellular organisms → Bacteria	2046	Open in IMG/M
3300023101\|Ga0224557_1149592	Not Available	865	Open in IMG/M
3300024295\|Ga0224556_1162081	Not Available	547	Open in IMG/M
3300025473\|Ga0208190_1015958	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300026456\|Ga0255351_1049470	Not Available	867	Open in IMG/M
3300026557\|Ga0179587_10900304	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300027824\|Ga0209040_10363994	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300028572\|Ga0302152_10089599	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300028574\|Ga0302153_10324425	Not Available	526	Open in IMG/M
3300028748\|Ga0302156_10304768	Not Available	714	Open in IMG/M
3300028783\|Ga0302279_10008087	All Organisms → cellular organisms → Bacteria	10464	Open in IMG/M
3300028785\|Ga0302201_10324175	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300028860\|Ga0302199_1252800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	530	Open in IMG/M
3300029911\|Ga0311361_11393443	Not Available	539	Open in IMG/M
3300029913\|Ga0311362_10103354	All Organisms → cellular organisms → Bacteria	3759	Open in IMG/M
3300029919\|Ga0302141_1199923	Not Available	542	Open in IMG/M
3300029944\|Ga0311352_11396458	Not Available	526	Open in IMG/M
3300029945\|Ga0311330_11356203	Not Available	508	Open in IMG/M
3300029952\|Ga0311346_10194581	Not Available	2282	Open in IMG/M
3300030011\|Ga0302270_10091697	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300030020\|Ga0311344_10244720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1785	Open in IMG/M
3300030020\|Ga0311344_11192241	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300030399\|Ga0311353_11591013	Not Available	527	Open in IMG/M
3300030506\|Ga0302194_10196529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	831	Open in IMG/M
3300030520\|Ga0311372_10389534	All Organisms → cellular organisms → Bacteria	2121	Open in IMG/M
3300030520\|Ga0311372_11082940	Not Available	1044	Open in IMG/M
3300030618\|Ga0311354_11927361	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300030688\|Ga0311345_10649818	Not Available	862	Open in IMG/M
3300030688\|Ga0311345_10738596	Not Available	784	Open in IMG/M
3300030688\|Ga0311345_10799448	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300030737\|Ga0302310_10441205	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300030743\|Ga0265461_13735813	Not Available	517	Open in IMG/M
3300031057\|Ga0170834_102579963	Not Available	1068	Open in IMG/M
3300031234\|Ga0302325_10500619	Not Available	1837	Open in IMG/M
3300031249\|Ga0265339_10210365	Not Available	955	Open in IMG/M
3300031446\|Ga0170820_13510997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	548	Open in IMG/M
3300031469\|Ga0170819_12755032	Not Available	511	Open in IMG/M
3300031524\|Ga0302320_11490460	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	666	Open in IMG/M
3300031788\|Ga0302319_10659824	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiota incertae sedis → Methylacidimicrobium	1071	Open in IMG/M
3300032561\|Ga0316222_1104434	Not Available	1124	Open in IMG/M
3300032805\|Ga0335078_10611894	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300032805\|Ga0335078_11349354	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300032805\|Ga0335078_12719138	Not Available	504	Open in IMG/M
3300032895\|Ga0335074_10361856	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300032898\|Ga0335072_10210897	All Organisms → cellular organisms → Bacteria	2288	Open in IMG/M
3300033405\|Ga0326727_10025692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11016	Open in IMG/M
3300033405\|Ga0326727_10130102	All Organisms → cellular organisms → Bacteria	3095	Open in IMG/M
3300033405\|Ga0326727_10809096	Not Available	721	Open in IMG/M
3300033561\|Ga0371490_1157246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	558	Open in IMG/M
3300033823\|Ga0334837_008629	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4863	Open in IMG/M
3300034091\|Ga0326724_0393829	Not Available	737	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.01%
Host-Associated	Host-Associated	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.41%
Aquatic	Environmental → Aquatic	39.60%
Plants	Host-Associated → Plants	0.99%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	38.61%
Peat	Environmental → Terrestrial → Peat	36.63%
Soil	Environmental → Terrestrial → Soil	22.77%
Sediment	Environmental → Aquatic → Sediment	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	36.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	35.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	8.91%
Lake	Environmental → Aquatic → Freshwater → Lake	1.98%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	36.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	29.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.95%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.98%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	19.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	16.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	11.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.95%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.95%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.97%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.97%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.98%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.99%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.99%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016700	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300022849	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T100	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032561	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18011	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070733_103223791	3300005541	Surface Soil	MSRSIRRPFAAITGTASAKDDKRMAHRGVRRKQDLALRTCADYENLLIP
Ga0075029_1008203022	3300006052	Watersheds	VERNCDLEYVMSRSYRRPYAAISRLASAKDNKGMAHRGVRRKQNLALKTSIDYENRLLPHRLECAWNNTYS*
Ga0097691_10991652	3300006055	Arctic Peat Soil	VMSRSYRRPYAAITGLASAKDDKRMAHRGVRRKQNLALKTSIDYENLLLPHRLECAWNNTYS*
Ga0116136_11700832	3300009547	Peatland	MSRSYRRPFAAVTGTASAKQDKRMAHRGVRQKQKLALKTCGH
Ga0116103_10655042	3300009615	Peatland	MSRSTRRPFAAITGTASAKDDKRMAHCGVRSKQDLALRTCADYESLLIPDELECAWNNTWCWGRDG
Ga0116117_11503011	3300009635	Peatland	MSRSYRRPYAAITGLASAKCDKQLAHRGVRRKQNLALKVCPDFENLLIPHRLECHWNDTYNWGR
Ga0116122_12419361	3300009639	Peatland	MSRSTRRPFVAITGLSSAKWDKQMAHRGVRRKQNLALNACLDYESLLLPHFLECHWNDT
Ga0116132_12243612	3300009646	Peatland	MSRSYRRPFAAVTGTASAKQDKRMAHRGVRQKQKLALKTCGHYEDLLLPHHLECSWNNIYCWGRDGKQTD
Ga0074046_102655892	3300010339	Bog Forest Soil	MSRSYRRPYAPITGLASAKNDKRIAHRGVRRKQNLALKTFIDYENLLLPHCLECAWNNTYS*
Ga0074045_102549192	3300010341	Bog Forest Soil	MSRSYRRPYASITGLASAKNDKRIAHRGVRRKQNLALKTFIDYENLLLPHCLECAWNNTYS*
Ga0163199_10867405	3300013092	Freshwater	MSRSTRRPYAAITGVSSAKDDKRLAHRGVRRAQNQALRTAGDYDNLLLPHKSECAWNNNYSWGRDGAQFLHTPPD
Ga0181517_100825341	3300014160	Bog	MSRSTRRPFAAITGAASAKDDKRMAHRGARRKQNLALITCADYESLLIPHRLECAWNNNYCWGRDGA
Ga0181517_101131171	3300014160	Bog	MSRSYRRPYAAITGNASAKDNKRMAHKGVRRKQDLALKTVLEYDNLLLPHR
Ga0181517_102613293	3300014160	Bog	MSRSTRRPFAAITGLSSARWDKQMAHRGVRRKQNLALKACLDYESLLLPHFLECHWNDTYNWG
Ga0181517_106531852	3300014160	Bog	MSRSYRRPFAAITGLASAKSDKQLAHRGVRRKQNLALKTCADYENLLLPHFLECPW
Ga0181532_106549902	3300014164	Bog	MSRSTRRPFVAITGFSSAKWDKQMAHRGVRRKQNLALKACLDYENLLLPHFLECHWNDTYNWG
Ga0181528_108326091	3300014167	Bog	MSRSYRRPYAAITGLASAKSDKQMAHRGVRRKQNLALKTCADYENL
Ga0181534_102198151	3300014168	Bog	MSRSTRRPFAAITGTASAKDDKRMAHRGVRRKQNLALKICADYEDFVVPHRLECAWNNNYCWSRDGAQSYHG
Ga0181534_109178151	3300014168	Bog	MSRSYRRPFVAITGPASAKWDKQMAHRGVRRKQNLNLRSCLDFDNFLLPHRL
Ga0181534_109418182	3300014168	Bog	MSRSYRRPFAAITGLASAKSDKQLAHRGVRRKQNLAIKICLDYDTFLV
Ga0181537_105230841	3300014201	Bog	MSRSTRRPFAAITGTASAKDDKRMAHRGVRRKQNLALKICADYEDFVVPHRLECAWNNNYCWSRDGAQS
Ga0182013_102280862	3300014492	Bog	MSRSYRRPFAAITGLTSAKRDKQLAHRGVRRKQNPALK
Ga0182019_113886022	3300014498	Fen	MSRSTRRPFAAITGLSSAKWDKQMAHRGVRRKQNLVLKTCLDYDN
Ga0182012_106028622	3300014499	Bog	MSRSYRRPFAAITGLASAKGDKQLAHRGVRRKQNHAIKICADYENLLLPHFLECPWNNTWCWGRDGAQC
Ga0181516_104119911	3300014655	Bog	MSRSYRRPFAAITGTASAKSDKRMAHRGVRRKQNLALKICADY
Ga0182030_104307942	3300014838	Bog	MSRSYRRPFAAVTGTASAKDDKRLAHRGARRKQNLVLKTCGDYENLVLPHPLECSWNNTYCWGRDG
Ga0182027_115955971	3300014839	Fen	MSRSTRRPYAAITGLSSAKWDKQMAHRGVRRKQSLLLKTCADHENLLLPHR
Ga0181513_11847661	3300016700	Peatland	MSRSYRRPFAAITGTASAKDDKRLAHRGLRRKQNLALKICPDF
Ga0187856_11592381	3300017925	Peatland	MSRSTRRPFVAITGLSSAKWDKQIAHRGVRRKQNLALKACLDYENLLLPHFLE
Ga0187850_102756302	3300017941	Peatland	MSRSIRRPFAAITGTASAKDDKRMAHRGVRRKQDLALKTCADYEGLLIPH
Ga0187879_107215201	3300017946	Peatland	MSRSIRRPFAAITGTASAKDDKRMAHRGVRRKQDLALKTCADYESLLIPHELECTWNNNWCW
Ga0187847_108965141	3300017948	Peatland	MSRSYRRPFAAITGFSSAKWDKQMAHRGVRRKQNLALKTCADHENLLLPHPLE
Ga0181520_106223982	3300017988	Bog	MSRSYRRPYAAITGLTSAKSDKQLAHRGVRRKQNHALKICADYENLLVPHRLECYWNNTYNWG
Ga0187891_11168881	3300017996	Peatland	MSRSYRRPFAAITGFSSAKWDKQMAHRGVRRKQNLALKTCADHENLLLPH
Ga0187865_10866303	3300018004	Peatland	MSRSTRRPFAAITGTASAKQDKRMAHRGVRRKQDLALRTCADYESLLIPHELEC
Ga0187865_11462472	3300018004	Peatland	MSRSIRRPFAAITGTASAKDDKRMAHRGVRRKQDLALKTCADYESLLIPHELECAW
Ga0187884_103251332	3300018009	Peatland	MSRSYRRPFAAITGLASAKSDKQMAHRGVRRKQNHALKTCAD
Ga0187882_12402851	3300018021	Peatland	MSRSYRRHFAAVTGTASAKQDKRMAHRGVRQKQKLALKTCGHYEDLLLPHHLECSWNNIYCWGRDGKQTDRGSL
Ga0187881_103271222	3300018024	Peatland	MSRSTRRPFVAITGLSSAKWDKQIAHRGVRRKQNLALKACLDYENLLLPHFLEC
Ga0187869_100095571	3300018030	Peatland	MSRSTRRPFAAITGTASAKDDKRMAHCGVRSKQDLALRTCADYESLLIP
Ga0187863_101244353	3300018034	Peatland	MSRSYRRPFAAVTGTASAKQDKRMAHRGVRQKQKLALKTCGHYEDLLLPHHLECSWNNIYCWGRDGKQT
Ga0187863_106793701	3300018034	Peatland	MSRSYRRPFAAITGLASAKSDKQLAHRGVRRKQNHAVKICADYEDMLLPHFLECPWNN
Ga0187875_100759625	3300018035	Peatland	MSRSTRRPFAAITGTSSAKDDKRLAHRGVRRKQNFVLKTCADYE
Ga0187887_101653381	3300018043	Peatland	MSRSTRRPFAAITGAASAKEDKRMAHRGVRRKQNSALKTCADYESLLIPHRLEC
Ga0187859_104203771	3300018047	Peatland	MSRSYRRPFSAVTGTASAKEDKRMAHRGVRQKQKLALKTCNDYEDLLLPHHLECSWNNTYCWGRD
Ga0187769_108781771	3300018086	Tropical Peatland	MSRSTRRPYAAITGTASAKDDKRMAHRGARRKQNLALKTCAD
Ga0187771_118578231	3300018088	Tropical Peatland	MSRSTRRPYAAITGTASAKDDKRMAHRGARRKQDSVLRTCIDYESLLI
Ga0210388_103256652	3300021181	Soil	MSRSYRRPFAAVNGIASAKEDKQLAHRGARRKQDLTIKTCLDYEDLFLPHELECAWNNNYCWGRDGAQRYVGLRYECGD
Ga0210388_109348401	3300021181	Soil	MSRSFRRPYAAITGTASAKSDKQLAHRGVRRKQNLVLKTCADFEGLLLPHHLECAWNNNYCWVRDGAQ
Ga0212124_1000860018	3300022553	Freshwater	MSRSTRRPYAAITGVSSAKDDKRLAHRGVRRAQNQALRTAGDYDNLLLPHKSECAWNNNYSWGRDGAQFLHTPPDRARSAGWYW
Ga0224531_10130881	3300022849	Soil	MSRSFRRPYAAITGLSSVKWDKQMAHRGVRRKQNLALKSSTDYENLLLPHPLECHWNNTYNWGRDGAQCYHSPWY
Ga0224557_11495921	3300023101	Soil	MSRSYRRPFAAITGLTSAKRDKQLAHRGVRRKQNPALKTCVDYENFLPPHVLECHWNDTYNWGRDGAQC
Ga0224556_11620811	3300024295	Soil	MSRSYRRPFAAIYSRACGKSDKQLAHRGVRRKQNLAIK
Ga0208190_10159581	3300025473	Peatland	MSRSIRRPFAAITGAASAKQDKHMAHRGVRSKQDLALKTCADYESLLIPHELECTWNNNWCWGRD
Ga0255351_10494702	3300026456	Soil	MSRSFRRPYAAITGTASAKSDKQLAHRGVRRKQNLIIKTCLDFENLLLPHALECPWNN
Ga0179587_109003042	3300026557	Vadose Zone Soil	MSRFYRRPFSAITGTASAKDDKRLAHRGMRRKQNLALR
Ga0209040_103639942	3300027824	Bog Forest Soil	VVRNCDLEYVMSRSYRRPYAPITGLASAKNDKRIAHRGVRRKQNLALKTFIDYENLLLPHCLECAWNNTYS
Ga0302152_100895991	3300028572	Bog	MSRSYRRPFAAITGLASAKSDKQMAHRGLRRKQNLALKICADFGNLLLPH
Ga0302153_103244252	3300028574	Bog	MSRSYRRPFAAITGLSSAKWDKQMAHRGVRRKQNLALKTCTDYEDFFTPHRLEC
Ga0302156_103047683	3300028748	Bog	MSRSYRRPFAAITGLSSAKWDKQMAHRGVRRKQNLALKTCTDYEDFFTPH
Ga0302279_100080871	3300028783	Bog	MSRSFRRPYAAITGTASAKSDKQLAHRGVRRKQNLIIKTCLDFENLLLPHVLEC
Ga0302201_103241752	3300028785	Bog	MSRSYRRPYAAITGLASAKSDKQSAHRGVRRKQNNALKICADYEN
Ga0302199_12528001	3300028860	Bog	MSRSYRRPFAAITGLASAKNDKQLAHRGVRRKQNLVLRTCPDHENLLLPHFLECPWNNTYCWGRD
Ga0311361_113934432	3300029911	Bog	MSRSYRRPFAAITGLASAKNDKQLAHRGVRRKQNLVLRTCPDHENLLLP
Ga0311362_101033545	3300029913	Bog	MSRSYRRPFAAITGLASARSDKQLAHRGVRRKQNLVLKTCQ
Ga0302141_11999232	3300029919	Bog	MSRSYRRPFAAITGLSSAKWDKQMAHRGVRRKQNLALKTCTDYEDFFT
Ga0311352_113964581	3300029944	Palsa	MSRSYRRPFAAITGVASAKSDKQLAHREVRRKQNLTLKTCLDFDNLVLPHFLECPWNNTWCWGRDGAQTYNG
Ga0311330_113562031	3300029945	Bog	MSRSYRRPYAAITGLASAKSDKQSAHRGVRRKQNNALKICAD
Ga0311346_101945811	3300029952	Bog	MSRSYRRPFAAIYSRACGKSDKQLAHRGVRRKQNLAIKICLNYDTLLVPHRLECHWNDTYNWARDDSQGYIGY
Ga0302270_100916971	3300030011	Bog	MSRSYRRPFAAITGLASAKSDKRFAHRGVRRKQNLVLKTCQDPDTLLLPHFLECAWNNTYAWGRDGGQCYLGY
Ga0311344_102447202	3300030020	Bog	MSRSTRRPFAAITGLSSAKWDKQMAHRGVRRKQNLVLKTCLDYDNL
Ga0311344_111922412	3300030020	Bog	MSRSYRRPFAAIYSRASGKSDKQLAHRGVRRKQNLGLNIC
Ga0311353_115910132	3300030399	Palsa	MSRSYRRPFAAITGVASAKSDKQLAHREVRRKQNLTLKTCL
Ga0302194_101965293	3300030506	Bog	MSRSYRRPFAAITGLSSAKWDKQMAHRGVRRKQNLALKTCTDYEDFFTPHR
Ga0311372_103895341	3300030520	Palsa	MSRPYRRPFAAITGVASAKSDKTLAHRGVRRKQNL
Ga0311372_110829402	3300030520	Palsa	MSRSLRRPFAAITGTASAKSDKQLAHRGVRRKQNLAIKTCT
Ga0311354_119273612	3300030618	Palsa	MSRPYRRPFAAITGVASAKSDKTLAHRGVRRKQNLAIKVCPDYDNLLLPH
Ga0311345_106498182	3300030688	Bog	MSRSYRRPYSAITGLASAKWDKQMAHRGVRRKQNL
Ga0311345_107385962	3300030688	Bog	MSRSYRRPFAAITGLASAKNDKQLAHRGVRRKQNLVLRTCPDHENLLLPHFLECPWNNTYCWGRDG
Ga0311345_107994483	3300030688	Bog	MSRSYRRPFAAITGLASAKSDKQLAHRGVRRKQNLALKTCSDYEDFLPPHRLECHWNDTYNWGRDGAQC
Ga0302310_104412053	3300030737	Palsa	MSRSYRRPFAAITGLASAKSDKQLAHRGVRRKQNLALKTCSDYEDFLPPHRLECHWNDTYNWGRDG
Ga0265461_137358131	3300030743	Soil	MSRSFRRPYAAITGLASAKSDKQTAHRGVRRKQNLALKTCTDYE
Ga0170834_1025799631	3300031057	Forest Soil	MSRSYRRPFAAINGIASAKEDKQLAHRNARQKQNLA
Ga0302325_105006194	3300031234	Palsa	MSRSYRRAYAAITGTASAKDDKRLAHRGVRRKQDWALKICVDFENLSLPH
Ga0265339_102103651	3300031249	Rhizosphere	MSRSIRRPFAAIAGAASAKEDKRMAHRGVRRKQELALRTCADYESLLI
Ga0170820_135109971	3300031446	Forest Soil	MSRSYRRPYATITGNASAKDDKRLAHRGVRRKQNQTR
Ga0170819_127550322	3300031469	Forest Soil	MSRSYRRPFAAINGIASAKEDKQLAHRNARRKQDLAIKTCADYEDFFLPHELECAWNN
Ga0302320_114904601	3300031524	Bog	MSRSYRRPYSAITGLSSAKWDKQMAHRGVRRKQNLALKTCLDYENFLPPHRLECHWNDTYNWGR
Ga0302319_106598241	3300031788	Bog	MSRSYRRPYAAITGLASAKSDKQLAHRGVRRKQDLAL
Ga0316222_11044344	3300032561	Freshwater	MRRPFAAITGLSSAKWDKQMAHRGVRRRQNLLLKTCLDYDNLLLPHPLECHWNDTYNWGRDGSQCYFGW
Ga0335078_106118942	3300032805	Soil	MSRSTRRPYAAVTGTASAKDDKRLAHRGVRRKQNLALKSCIDFEELLLPHWLECPWNNTWCWDRDGAQRYC
Ga0335078_113493541	3300032805	Soil	MSRSYRRPFMAVTGAASAKSDKRIAHRGVRRKQNLALQTCLDYDGLLIPHPLECTWNDNWSWDRDGGQLYHSRWYES
Ga0335078_127191381	3300032805	Soil	MSRSYRRPFAATNGTASAKNDKRWAHRGARRKQNLALKTCADYENLLVPHQLECTWNNTWAWSRDGAQRDFSYLRL
Ga0335074_103618563	3300032895	Soil	MSRFYRRPYAAITGTASAKDDKRVAHRGVRRKQKLA
Ga0335072_102108974	3300032898	Soil	MTWVRNCDLEFVMTRSWRRPYAAIKGTASAKDDKRLANPGVRRKQNLASKICADYENLLLPD
Ga0326727_1002569213	3300033405	Peat Soil	MSRSYRRPFAAITGLSSAKWDKQMAHRGVRRKQNLALKTCVDYENFLPPHFLECHWN
Ga0326727_101301021	3300033405	Peat Soil	MSRSTRRPFAAITGLSSAKWDKQMAHRGVRRKQNLALKTCVDYENFLPPHFLECHWN
Ga0326727_108090962	3300033405	Peat Soil	MSRSTRRPYSAIIGLFSAKWDKQMAHRGVRRKQNLYLKT
Ga0371490_11572462	3300033561	Peat Soil	MSRSTRRPFAAITGLSSAKWDKQMAHRGVRRKQNLALKACLDYESLLLPHFLECHWNDTYCWGRDGAQCYRG
Ga0334837_008629_2_205	3300033823	Soil	MSRSTRRPFAAITGLSSAKWDKQMAHRGVRRKQNLALKACLDYESLLLPHFLECHWNDTYCWGRDGAQ
Ga0326724_0393829_2_130	3300034091	Peat Soil	MSRSYRRPFAAITGLSSAKWDKQMAHRGVRRKQNLALKTCVDY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102332

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences