NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F102290

Metagenome / Metatranscriptome Family F102290

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F102290
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 57 residues
Representative Sequence MIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Number of Associated Samples 61
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 7.92 %
% of genes near scaffold ends (potentially truncated) 55.45 %
% of genes from short scaffolds (< 2000 bps) 95.05 %
Associated GOLD sequencing projects 55
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (52.475 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(30.693 % of family members)
Environment Ontology (ENVO) Unclassified
(56.436 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(66.337 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 77.97%    β-sheet: 0.00%    Coil/Unstructured: 22.03%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF00239Resolvase 40.59
PF13384HTH_23 3.96
PF04828GFA 3.96
PF00589Phage_integrase 2.97
PF00580UvrD-helicase 0.99
PF00202Aminotran_3 0.99
PF04392ABC_sub_bind 0.99
PF03592Terminase_2 0.99
PF00216Bac_DNA_binding 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 40.59
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 40.59
COG3791Uncharacterized conserved proteinFunction unknown [S] 3.96
COG0210Superfamily I DNA or RNA helicaseReplication, recombination and repair [L] 0.99
COG0776Bacterial nucleoid DNA-binding protein IHF-alphaReplication, recombination and repair [L] 0.99
COG10743’-5’ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)Replication, recombination and repair [L] 0.99
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.99
COG3728Phage terminase, small subunitMobilome: prophages, transposons [X] 0.99
COG3973DNA helicase IVReplication, recombination and repair [L] 0.99


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A52.48 %
All OrganismsrootAll Organisms47.52 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005332|Ga0066388_104598620All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium702Open in IMG/M
3300005332|Ga0066388_105910657All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300005332|Ga0066388_106063694Not Available610Open in IMG/M
3300005332|Ga0066388_107895057All Organisms → cellular organisms → Bacteria → Proteobacteria532Open in IMG/M
3300005363|Ga0008090_10053701Not Available618Open in IMG/M
3300005713|Ga0066905_100935859All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300005764|Ga0066903_102085110Not Available1091Open in IMG/M
3300005764|Ga0066903_105769396Not Available650Open in IMG/M
3300005764|Ga0066903_105934490Not Available640Open in IMG/M
3300005764|Ga0066903_105984657Not Available637Open in IMG/M
3300005764|Ga0066903_107628548Not Available557Open in IMG/M
3300005764|Ga0066903_108075560All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300005764|Ga0066903_108529143Not Available522Open in IMG/M
3300005764|Ga0066903_108974321Not Available506Open in IMG/M
3300009792|Ga0126374_11794059Not Available513Open in IMG/M
3300010043|Ga0126380_11363024Not Available621Open in IMG/M
3300010048|Ga0126373_11637198Not Available708Open in IMG/M
3300010048|Ga0126373_12521230Not Available573Open in IMG/M
3300010358|Ga0126370_11225054All Organisms → cellular organisms → Bacteria → Proteobacteria699Open in IMG/M
3300010359|Ga0126376_11686711All Organisms → cellular organisms → Bacteria → Proteobacteria668Open in IMG/M
3300010361|Ga0126378_10989873All Organisms → cellular organisms → Bacteria → Proteobacteria945Open in IMG/M
3300010361|Ga0126378_11741339Not Available708Open in IMG/M
3300010366|Ga0126379_10512131Not Available1273Open in IMG/M
3300010366|Ga0126379_11904654Not Available698Open in IMG/M
3300010398|Ga0126383_10774369Not Available1041Open in IMG/M
3300010863|Ga0124850_1027698All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1819Open in IMG/M
3300010868|Ga0124844_1096503All Organisms → cellular organisms → Bacteria → Proteobacteria1120Open in IMG/M
3300010868|Ga0124844_1110433Not Available1048Open in IMG/M
3300012971|Ga0126369_10539385All Organisms → cellular organisms → Bacteria → Proteobacteria1230Open in IMG/M
3300012971|Ga0126369_12015589Not Available665Open in IMG/M
3300012971|Ga0126369_12853889Not Available566Open in IMG/M
3300012971|Ga0126369_13401541All Organisms → cellular organisms → Bacteria → Proteobacteria521Open in IMG/M
3300016341|Ga0182035_10532025All Organisms → cellular organisms → Bacteria → Proteobacteria1008Open in IMG/M
3300016357|Ga0182032_10774826Not Available809Open in IMG/M
3300016357|Ga0182032_10885578Not Available758Open in IMG/M
3300016371|Ga0182034_11010232All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300016371|Ga0182034_11476453Not Available595Open in IMG/M
3300016371|Ga0182034_11875709Not Available529Open in IMG/M
3300016387|Ga0182040_11197921Not Available639Open in IMG/M
3300016387|Ga0182040_11479797Not Available576Open in IMG/M
3300016387|Ga0182040_11963032All Organisms → cellular organisms → Bacteria → Proteobacteria502Open in IMG/M
3300016422|Ga0182039_11614759Not Available592Open in IMG/M
3300021405|Ga0210387_11895745Not Available500Open in IMG/M
3300021560|Ga0126371_11155136All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300026909|Ga0207858_1026187Not Available554Open in IMG/M
3300027010|Ga0207839_1006795Not Available1401Open in IMG/M
3300027070|Ga0208365_1039906Not Available625Open in IMG/M
3300027680|Ga0207826_1015748Not Available2064Open in IMG/M
3300027703|Ga0207862_1166276All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales658Open in IMG/M
3300027725|Ga0209178_1292826All Organisms → cellular organisms → Bacteria → Proteobacteria597Open in IMG/M
3300031543|Ga0318516_10136262All Organisms → cellular organisms → Bacteria → Proteobacteria1406Open in IMG/M
3300031546|Ga0318538_10641680Not Available576Open in IMG/M
3300031573|Ga0310915_10062189Not Available2438Open in IMG/M
3300031573|Ga0310915_10243411Not Available1265Open in IMG/M
3300031573|Ga0310915_10372139Not Available1014Open in IMG/M
3300031679|Ga0318561_10547834All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales637Open in IMG/M
3300031680|Ga0318574_10283444All Organisms → cellular organisms → Bacteria → Proteobacteria961Open in IMG/M
3300031718|Ga0307474_11227319All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300031736|Ga0318501_10032451All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2322Open in IMG/M
3300031744|Ga0306918_10030727All Organisms → cellular organisms → Bacteria → Proteobacteria3390Open in IMG/M
3300031753|Ga0307477_10401007All Organisms → cellular organisms → Bacteria → Proteobacteria939Open in IMG/M
3300031763|Ga0318537_10081129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1194Open in IMG/M
3300031763|Ga0318537_10349409All Organisms → cellular organisms → Bacteria → Proteobacteria546Open in IMG/M
3300031771|Ga0318546_10267538All Organisms → cellular organisms → Bacteria1179Open in IMG/M
3300031777|Ga0318543_10143039All Organisms → cellular organisms → Bacteria → Proteobacteria1048Open in IMG/M
3300031833|Ga0310917_10228686Not Available1249Open in IMG/M
3300031833|Ga0310917_10253245All Organisms → cellular organisms → Bacteria → Proteobacteria1185Open in IMG/M
3300031859|Ga0318527_10336874All Organisms → cellular organisms → Bacteria → Proteobacteria643Open in IMG/M
3300031879|Ga0306919_10330545Not Available1161Open in IMG/M
3300031879|Ga0306919_10391069Not Available1066Open in IMG/M
3300031879|Ga0306919_10883673All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300031880|Ga0318544_10318414Not Available604Open in IMG/M
3300031890|Ga0306925_11185091Not Available766Open in IMG/M
3300031890|Ga0306925_11943886Not Available557Open in IMG/M
3300031893|Ga0318536_10488688All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300031894|Ga0318522_10094149All Organisms → cellular organisms → Bacteria → Proteobacteria1105Open in IMG/M
3300031910|Ga0306923_10716395All Organisms → cellular organisms → Bacteria → Proteobacteria1112Open in IMG/M
3300031912|Ga0306921_10575538Not Available1304Open in IMG/M
3300031912|Ga0306921_10630327All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1237Open in IMG/M
3300031912|Ga0306921_12563582Not Available527Open in IMG/M
3300031945|Ga0310913_10339823Not Available1062Open in IMG/M
3300031945|Ga0310913_11168633Not Available536Open in IMG/M
3300032025|Ga0318507_10420289Not Available582Open in IMG/M
3300032035|Ga0310911_10794327All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300032052|Ga0318506_10474790Not Available554Open in IMG/M
3300032059|Ga0318533_10397519All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1006Open in IMG/M
3300032076|Ga0306924_11324847All Organisms → cellular organisms → Bacteria → Proteobacteria772Open in IMG/M
3300032076|Ga0306924_11984612All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300032076|Ga0306924_12181133Not Available565Open in IMG/M
3300032076|Ga0306924_12195590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales563Open in IMG/M
3300032076|Ga0306924_12224064Not Available558Open in IMG/M
3300032091|Ga0318577_10116538All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300032094|Ga0318540_10090711Not Available1428Open in IMG/M
3300032094|Ga0318540_10372134All Organisms → cellular organisms → Bacteria → Proteobacteria690Open in IMG/M
3300032174|Ga0307470_10292003All Organisms → cellular organisms → Bacteria → Proteobacteria1101Open in IMG/M
3300032180|Ga0307471_101363639All Organisms → cellular organisms → Bacteria → Proteobacteria870Open in IMG/M
3300032261|Ga0306920_101007973Not Available1212Open in IMG/M
3300032261|Ga0306920_102482350Not Available713Open in IMG/M
3300033289|Ga0310914_10085480All Organisms → cellular organisms → Bacteria → Proteobacteria2684Open in IMG/M
3300033289|Ga0310914_10844823All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300033289|Ga0310914_11899399All Organisms → cellular organisms → Bacteria500Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil30.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil26.73%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil19.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil15.84%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.96%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.99%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.99%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010863Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)EnvironmentalOpen in IMG/M
3300010868Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300026909Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)EnvironmentalOpen in IMG/M
3300027010Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)EnvironmentalOpen in IMG/M
3300027070Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)EnvironmentalOpen in IMG/M
3300027680Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)EnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066388_10459862023300005332Tropical Forest SoilMIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVSVETAKNNSAPPAFGSQ*
Ga0066388_10591065713300005332Tropical Forest SoilMIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNS
Ga0066388_10606369423300005332Tropical Forest SoilMTLLIAGTSMAFAVHQWWRGYHLIAIAFITFACLMAGVAVETAKNNSAPPVFGSQ*
Ga0066388_10789505723300005332Tropical Forest SoilMIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPV
Ga0008090_1005370123300005363Tropical Rainforest SoilMIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLTAGVAVETAKNNSAPPVFGSQ*
Ga0066905_10093585923300005713Tropical Forest SoilMIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ*
Ga0066903_10208511033300005764Tropical Forest SoilMIVLMTLLIAVVSMTFAVHQWRRGYHMMAIGFITFACLVAGVAVETAKNNSAPPVFDSQ*
Ga0066903_10576939623300005764Tropical Forest SoilMVILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ*
Ga0066903_10593449023300005764Tropical Forest SoilMLVLLMLLIAGASMAFAVHQWWRGHHMMAIGFITFALLIAGVAVEAAKDNSAPPVFGSQ*
Ga0066903_10598465713300005764Tropical Forest SoilSEATASKAMIILMTLLIAGTSMAFAVHQWWRGHHMMAIGFITFACLMAGVAVETAKNNSAAPVFGSQ*
Ga0066903_10762854813300005764Tropical Forest SoilMIILLTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACIMAGVAVETARNNSAPPVFGSQ*
Ga0066903_10807556023300005764Tropical Forest SoilMIILMTLLIAGSSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNS
Ga0066903_10852914323300005764Tropical Forest SoilMIILMTLLIAGTSMAFAVHQWWRGYHLIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ*
Ga0066903_10897432123300005764Tropical Forest SoilMIILMTLLIAGTSMTFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ*
Ga0126374_1179405923300009792Tropical Forest SoilMIILMTLLMAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ*
Ga0126380_1136302423300010043Tropical Forest SoilLPGAGPAHAALDRMIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ*
Ga0126373_1163719823300010048Tropical Forest SoilIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVDVETAKNNSAPPVFGSQ*
Ga0126373_1252123023300010048Tropical Forest SoilMIILMTLLIAGTSMTFAVHQWWRGHHMIAIGFIIFACLMAGVAVETAKNNSAPPVFGSQ*
Ga0126370_1122505423300010358Tropical Forest SoilMIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAIEAAKNNSAPPFLARSHQDR*
Ga0126376_1168671123300010359Tropical Forest SoilMIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGS
Ga0126378_1098987323300010361Tropical Forest SoilMIILMTLLIAGASMAFAVHQWRRGYHLIAIGFITFACLTAGVAVETAKNNSAPPVFGSQ*
Ga0126378_1174133923300010361Tropical Forest SoilAQSEATASKAMIILMTVLIAGASMAFAVHQWRRGYHLIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ*
Ga0126379_1051213133300010366Tropical Forest SoilMIILMTLLIAGTSMTLAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAP
Ga0126379_1190465423300010366Tropical Forest SoilMIILMTLLAGASMAFAVHQWWRGYHLIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ*
Ga0126383_1077436913300010398Tropical Forest SoilTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ*
Ga0124850_102769813300010863Tropical Forest SoilMIISMTLLIAGASMAFAVHQWWHRHHIMAIGLITFTFALVMAGVAVETAKNNSAPPVFG
Ga0124844_109650333300010868Tropical Forest SoilMIILMTLSIAGTSMAFAVHQWWRGYHLIAIAFITFACLMAGVAVETAKNNSAPPVLDSQ*
Ga0124844_111043313300010868Tropical Forest SoilMIILIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVSVETAKNNSAPPAFGSQ*
Ga0126369_1053938523300012971Tropical Forest SoilMIILMTLLIAGTSMAFAVHQWWRGHHMMAIGFITFACLMAGVAVETAKNNSAAPVFGSQ*
Ga0126369_1201558923300012971Tropical Forest SoilMIVVMTLSVAGTTMAFAVHQGWRGHHMMAIGFITFALLIAGVAVEAAKDNSAPPVFGSQ*
Ga0126369_1285388913300012971Tropical Forest SoilILMTLLIAGASMAFAVHQWRRGYHLIAIGFITFACLIAGVAVETVKNNSAPPIFGSQ*
Ga0126369_1340154123300012971Tropical Forest SoilMIILMTLLITGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ*
Ga0182035_1053202513300016341SoilMIILMTLLIAGASMAFAVHQWWRGYHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0182032_1077482633300016357SoilIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0182032_1088557813300016357SoilKAMIILMTLLIAGTSMAFAVHQWWRGHHMIAIDFITFACLMAGVAVETAKNNSAPPVFGS
Ga0182034_1101023213300016371SoilMIILMTLLITGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNQS
Ga0182034_1147645323300016371SoilMIILMTLLIAGTSMTLAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVF
Ga0182034_1187570923300016371SoilAGTSMAFAVHQWWRGYHMIAIGFITFACLMAGVAVETAKNNSAPLVFDSQ
Ga0182040_1119792113300016387SoilRGRRSEATASKAMILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVALETAKNNSAPPVFGSQ
Ga0182040_1147979723300016387SoilLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0182040_1196303223300016387SoilMIILMTLLIAGTSMAFAVHQWWRGYHMIAIGFITFACLMAGVAVETAKNNSAPPVFGS
Ga0182039_1161475923300016422SoilILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0210387_1189574523300021405SoilIILMTLLIAGTSMAFAVHQWWRGHHMIAVGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0126371_1115513623300021560Tropical Forest SoilMIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNN
Ga0207858_102618713300026909Tropical Forest SoilMMILMTLLIAGASMAFAVHQWRRGYHLIAIGFITFACLIAGVAVETAKNNSAPPVFGSQ
Ga0207839_100679513300027010Tropical Forest SoilMMILMTLLIAGASMAFAVHQWRRGYHLIAIGFITFACLMAGDAIETAKNNSAPPVFGSQ
Ga0208365_103990613300027070Forest SoilMIVYGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0207826_101574813300027680Tropical Forest SoilMIILMTLLIAGASMAFAVHQWRRGYHLIAIGFITFACLIAGVAIEAAKNN
Ga0207862_116627623300027703Tropical Forest SoilMIILMTLLIAGTSMAFAVHQWWRGYHLIAIAFITFACLMAGVAIETAKNNSAPPVFGSQ
Ga0209178_129282623300027725Agricultural SoilMIILMTLLIAGTSMAFAVHQWWRGYHLIAIAFITFAWVMAGIAIEAAK
Ga0318516_1013626223300031543SoilMIILMTLMIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0318538_1064168013300031546SoilMIILMTLLITGTSMAFAVHQWWRGYHLIAIAFITFACLMAGVAVQTAKNNSAPPVFGSQ
Ga0310915_1006218943300031573SoilMIILMMLLIAGTSMAFAVHQWWRGHHLIAIGFITFACLMAGVAVETAKNNSAPLVFGSQ
Ga0310915_1024341113300031573SoilMIILMTLLIAGTSMTLAVHQWWRGHHMIAIGFITFACLMAGVAVETAK
Ga0310915_1037213933300031573SoilRTSEATASKAMIILMTLLIAGTSMAFAVHQWWRGYHMIAIGFITFACLMAGVAVETAKNNSAPLVFDSQ
Ga0318561_1054783413300031679SoilMIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNQ
Ga0318574_1028344413300031680SoilMIILMTLLIAGASMAFAVHQWRRGYHLIAIAFITFACLMAGVAVETAKNNSAP
Ga0307474_1122731923300031718Hardwood Forest SoilMIILMIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPAFGSQ
Ga0318501_1003245143300031736SoilMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0306918_1003072743300031744SoilMIILMTLLITGTSMAFAVHQWWRGYHLIAIAFITFACLMAGVAVQTAKN
Ga0307477_1040100723300031753Hardwood Forest SoilMIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPP
Ga0318537_1008112933300031763SoilMIILMTLLIAGTSMAFAVHHWWRGHHMIAIGFIIFACLMAGVAVETAKNN
Ga0318537_1034940923300031763SoilMIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFG
Ga0318546_1026753823300031771SoilMALLIAGASMAFAVHQWWRGHHMMAIGFITFACLIAGAAIEAVKNNPAPPVFGSQ
Ga0318543_1014303923300031777SoilMIILMTLLITGTSMAFAVHQWWRGYHLIAIAFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0310917_1022868613300031833SoilMIILMMLLIAGTSMAFAVHQWWRGHHLIAIGFITFACLMAGVAVETAKNNSAPLV
Ga0310917_1025324533300031833SoilMIILMTLLIAGASMAFAVHQWKGGYHLTAIGFITFACLIAGVAVEAAKN
Ga0318527_1033687423300031859SoilMIILMTLLITGTSMAFAVHQWWRGYHLIAIGFITFACLMAGVAVETAKNNSAPPVF
Ga0306919_1033054523300031879SoilMIILMTLLIAGTSMAFAVHQWWRGHHMIAIDFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0306919_1039106923300031879SoilMALLIAGASMAFAVHQWWRGHHMMAIGFITFACLIAGAAIEAAKNNPAPPVFGSQ
Ga0306919_1088367313300031879SoilEATESKAMIILMTLLIAGISMAFAVHQWWRGYHLIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0318544_1031841423300031880SoilMIILMTLLIAGTSMTLAVHQWWRGYHMIAIGFITFACLMAGVAVETAKNNSAPLVFDSQ
Ga0306925_1118509123300031890SoilMIILMTLLIAGISMAFAVHQWWRGYHLIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0306925_1194388613300031890SoilMIILMTLLIAGTSMAFAVHQWWRGYHMIAIGFITFACLMAGVTVETTKNNAVPPVFGSQ
Ga0318536_1048868813300031893SoilMIILMTLMIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPAVFGSQ
Ga0318522_1009414923300031894SoilMIILMTLLITGTSMAFAVHQWWRGYHLIAIAFITFACLMAGVAVETAKNNSA
Ga0306923_1071639513300031910SoilAGISMAFAVHQWWRGYHLIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0306921_1057553833300031912SoilMIILMALLIAGISMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0306921_1063032723300031912SoilMIILMMLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPLVFGSQ
Ga0306921_1256358213300031912SoilTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0310913_1033982313300031945SoilMIILMTLLIAGTSMTLAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0310913_1116863313300031945SoilMIILMTLLIAGTSMPLRCISGGAVITMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0318507_1042028913300032025SoilAASKAMIILMTVLIAGASMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0310911_1079432713300032035SoilMIILMMLLIAGTSMAFAVHQWWRGHHLIAIGFITFACLMAGVAVETAKNNSAPL
Ga0318506_1047479013300032052SoilGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0318533_1039751913300032059SoilVLIAGASMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPAVFGSQ
Ga0306924_1132484723300032076SoilGTSMAFAVHQWWRGHHMIAVGFITFACLMAGVAVETAKNNSAPPVFDSQ
Ga0306924_1198461213300032076SoilMIILMTLLIAGTSMAFAVHQWWRGHHMKAIGFITFACLMAGVAVETAKNNSAP
Ga0306924_1218113313300032076SoilPMIILMTLLIAGASMAFAVHQWWRGYHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0306924_1219559023300032076SoilMIILMTLLIAGTSMAFAVHQWWRGHHIMAIGFITFACIIAGVAVETAKNNSAPPVFGSQ
Ga0306924_1222406413300032076SoilGRTSEATASKAVIILMTLLIAGTSMAFAVHQWWHGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0318577_1011653823300032091SoilMIILMTLMIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVEAAKNNSAPPVFGSQ
Ga0318540_1009071143300032094SoilTLLITGTSMAFAVHQWWRGYHLIAIAFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0318540_1037213423300032094SoilMIILMTLLITGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPSVFGSQ
Ga0307470_1029200323300032174Hardwood Forest SoilMIILMTLLIAGTSMAFAVHQWWRGHHMIAIGFITFACLMAGVAVETAKNNSAPPAFGSQ
Ga0307471_10136363923300032180Hardwood Forest SoilMIILMTLLIAGTSMAFAVHQWWRGYHLIAIAFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0306920_10100797313300032261SoilMIIVMTLLIAGTSMAFAVHQWWRGYHLIAIAFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0306920_10248235013300032261SoilIILMTLLIAGTSMAFAVHQWWRGHHMIAIDFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0310914_1008548053300033289SoilKAMIIVMTLLIAGTSMAFAVHQWWRGYHLIAIAFITFACLMAGVAVETAKNNSAPPVFGS
Ga0310914_1084482313300033289SoilVIILMTLLIAGTSMAFAVHQWWHGHHMIAIGFITFACLMAGVAVETAKNNSAPPVFGSQ
Ga0310914_1189939923300033289SoilMIILMTLLIAGTSMTLAVHQWWRGYHMIAIGFITFACLMAGVAVETAKNNSAPLVFD


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