Metagenome Family F102277

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102277
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	89 residues
Representative Sequence	MYAGNPALDTVNVKAALGQFDLLPLQVADLRGPQAMAVGHQDHGRVAMPIAAMLAGAVHQPLNLALGEVAPLDCQVYDAWCAFLGCRFH
Number of Associated Samples	59
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.40 %
% of genes near scaffold ends (potentially truncated)	74.26 %
% of genes from short scaffolds (< 2000 bps)	92.08 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.149 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (53.465 % of family members)
Environment Ontology (ENVO)	Unclassified (81.188 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (53.465 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.01% β-sheet: 0.00% Coil/Unstructured: 52.99%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00589	Phage_integrase	26.73
PF13424	TPR_12	4.95
PF03401	TctC	2.97
PF06035	Peptidase_C93	2.97
PF13365	Trypsin_2	1.98
PF03060	NMO	0.99
PF12770	CHAT	0.99
PF13936	HTH_38	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.97
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	2.97
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.99
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.15 %
Unclassified	root	N/A	14.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.15 %
Unclassified	root	N/A	14.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.15 %
Unclassified	root	N/A	14.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	81.19 %
Unclassified	root	N/A	14.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	81.19 %
Unclassified	root	N/A	14.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.85 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.94 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.98 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.94 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.98 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.94 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.97 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.98 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.94 %
Bradyrhizobium sp. CCBAU 15635	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 15635	2.97 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.98 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100335834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2157	Open in IMG/M
3300005332\|Ga0066388_101096648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1347	Open in IMG/M
3300005332\|Ga0066388_101532301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1168	Open in IMG/M
3300005332\|Ga0066388_102263674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	982	Open in IMG/M
3300005332\|Ga0066388_103291277	Not Available	825	Open in IMG/M
3300005332\|Ga0066388_103378489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	815	Open in IMG/M
3300005471\|Ga0070698_100688370	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300005713\|Ga0066905_101157650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300005764\|Ga0066903_102636890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	974	Open in IMG/M
3300005764\|Ga0066903_102946402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	923	Open in IMG/M
3300005764\|Ga0066903_104478642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300005764\|Ga0066903_106455667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300005764\|Ga0066903_108313716	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005983\|Ga0081540_1099295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1258	Open in IMG/M
3300010043\|Ga0126380_10945366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300010366\|Ga0126379_12263203	Not Available	644	Open in IMG/M
3300012469\|Ga0150984_105037306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1020	Open in IMG/M
3300012955\|Ga0164298_10592122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300016270\|Ga0182036_11362457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M
3300016404\|Ga0182037_10657661	Not Available	894	Open in IMG/M
3300016422\|Ga0182039_10638377	Not Available	934	Open in IMG/M
3300016422\|Ga0182039_11330591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300027654\|Ga0209799_1109809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300031545\|Ga0318541_10338096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	840	Open in IMG/M
3300031545\|Ga0318541_10512230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300031561\|Ga0318528_10390279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	747	Open in IMG/M
3300031573\|Ga0310915_10177808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1481	Open in IMG/M
3300031573\|Ga0310915_10488953	Not Available	874	Open in IMG/M
3300031573\|Ga0310915_10537848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	829	Open in IMG/M
3300031573\|Ga0310915_10983018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300031680\|Ga0318574_10552248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300031681\|Ga0318572_10676808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300031682\|Ga0318560_10598237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300031682\|Ga0318560_10754529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300031719\|Ga0306917_10170061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1631	Open in IMG/M
3300031719\|Ga0306917_10268832	Not Available	1310	Open in IMG/M
3300031723\|Ga0318493_10732081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300031724\|Ga0318500_10025416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2316	Open in IMG/M
3300031724\|Ga0318500_10437130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300031736\|Ga0318501_10092299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1498	Open in IMG/M
3300031748\|Ga0318492_10597886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300031768\|Ga0318509_10320594	Not Available	867	Open in IMG/M
3300031768\|Ga0318509_10662352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300031770\|Ga0318521_10864378	Not Available	552	Open in IMG/M
3300031771\|Ga0318546_11101683	Not Available	558	Open in IMG/M
3300031779\|Ga0318566_10307700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	784	Open in IMG/M
3300031780\|Ga0318508_1097859	Not Available	813	Open in IMG/M
3300031794\|Ga0318503_10183093	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300031797\|Ga0318550_10100396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 15635	1364	Open in IMG/M
3300031797\|Ga0318550_10555873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300031798\|Ga0318523_10587871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300031846\|Ga0318512_10201944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	972	Open in IMG/M
3300031879\|Ga0306919_10053916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 15635	2675	Open in IMG/M
3300031879\|Ga0306919_10890620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300031890\|Ga0306925_10272423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1823	Open in IMG/M
3300031890\|Ga0306925_10601280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1161	Open in IMG/M
3300031890\|Ga0306925_11264691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300031890\|Ga0306925_11596253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300031896\|Ga0318551_10354689	Not Available	830	Open in IMG/M
3300031912\|Ga0306921_11765986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300031912\|Ga0306921_12100930	Not Available	598	Open in IMG/M
3300031912\|Ga0306921_12281149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300031941\|Ga0310912_10640874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M
3300031942\|Ga0310916_10482080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1056	Open in IMG/M
3300031945\|Ga0310913_10987179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	590	Open in IMG/M
3300031946\|Ga0310910_10108518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2071	Open in IMG/M
3300031946\|Ga0310910_10266187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1343	Open in IMG/M
3300031954\|Ga0306926_11313895	Not Available	843	Open in IMG/M
3300031954\|Ga0306926_11852271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300031954\|Ga0306926_11873532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300031954\|Ga0306926_12072766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300031954\|Ga0306926_12471758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300032001\|Ga0306922_10846200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	953	Open in IMG/M
3300032035\|Ga0310911_10257165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1000	Open in IMG/M
3300032042\|Ga0318545_10313120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300032043\|Ga0318556_10116191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1364	Open in IMG/M
3300032043\|Ga0318556_10671389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300032044\|Ga0318558_10214616	Not Available	941	Open in IMG/M
3300032051\|Ga0318532_10285942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300032055\|Ga0318575_10232068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	929	Open in IMG/M
3300032055\|Ga0318575_10383401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300032059\|Ga0318533_11243678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300032060\|Ga0318505_10163018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 15635	1036	Open in IMG/M
3300032065\|Ga0318513_10317497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300032066\|Ga0318514_10265239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	905	Open in IMG/M
3300032076\|Ga0306924_10859626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1006	Open in IMG/M
3300032076\|Ga0306924_11763722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300032091\|Ga0318577_10051314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1851	Open in IMG/M
3300032094\|Ga0318540_10189031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	991	Open in IMG/M
3300032261\|Ga0306920_100265173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2561	Open in IMG/M
3300032261\|Ga0306920_100333964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2256	Open in IMG/M
3300032261\|Ga0306920_102578194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300032261\|Ga0306920_103256420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300032261\|Ga0306920_103853100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300033289\|Ga0310914_10114239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2341	Open in IMG/M
3300033289\|Ga0310914_10124214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2249	Open in IMG/M
3300033289\|Ga0310914_10585841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1006	Open in IMG/M
3300033289\|Ga0310914_10832378	Not Available	821	Open in IMG/M
3300033289\|Ga0310914_11397044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300033290\|Ga0318519_10210686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1112	Open in IMG/M
3300033290\|Ga0318519_10417024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	801	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.02%
Host-Associated	Host-Associated	1.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.02%
Plants	Host-Associated → Plants	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.16%
Loam	Environmental → Terrestrial → Soil → Loam	13.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	81.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	53.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1003358342	3300005332	Tropical Forest Soil	MHAGNPILDPVNVQAALGELDLLPLQVADLGGPQTVSIGDQDHGRVAMAVAAMLSGAVHQPVDLALGEIATLDCQVYGGWSAVLGSRFHRGKTLILDAE*
Ga0066388_1010966483	3300005332	Tropical Forest Soil	MYAGNPVLDTVNVKAALGQFDLLPLQVAHLGGPQTVAVGHQDHGRIAMAVAAMLAGAVHQPLDLTLGEIASRDCQVYDAWCAFLGCRFHRGKTFLLAVE*
Ga0066388_1015323011	3300005332	Tropical Forest Soil	MYAGDPVLDPVNVQAALGEFDLLPLQSADLGGPQTVPIGDQDHGRVAMPVAAMLAGTVHQPLDLALGEIAPFNCQVYDG*
Ga0066388_1022636743	3300005332	Tropical Forest Soil	MYAGNAVLDSVNVQAAFGYIDLLPSQVADLRGPQAVPIGDQDHGRVAMPVAAMLACAAYQPLDLALGEIVPFDCFWGERSAS*
Ga0066388_1032912772	3300005332	Tropical Forest Soil	MNVEAALGELDLLPLQVAHLGGPQTVSIGHQDHGRVAMPVATVLASAVHQALDLALGEIASLDCQVYDAWSAFFGCRFHADKLCLRAS*
Ga0066388_1033784892	3300005332	Tropical Forest Soil	MEATLGELDLLPLQVADLRSPQTVTIGDQYHGRIAMPVAAMLAGAVHQPLNLALGEVAPLDCQVYDAWGAFLGCRFHADKPCLR
Ga0070698_1006883701	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MHAGNAVLDAVNVEAALGQLDLRPLQVADLRGPQTVTIGDQDHGRIAMAVAAMLSGAVRQPLDLVLGEVAPLDCQVYDAWCAF
Ga0066905_1011576502	3300005713	Tropical Forest Soil	WVHAGDPILDPVNVQAALGELNLVPLQVAHLGGPQAMTVGHQDHGRIAMAVAAMLSGAVHQPVDLALGEVAPLDCQVYDTWGAFLGCRFHTFIAQSN*
Ga0066903_1026368904	3300005764	Tropical Forest Soil	VNVQAALGQFDLLPLQVADLRGPQAVSIGNQDHGRVAMPIAAMLSGAVHQPLDLALGEIAPLDCQVYDA
Ga0066903_1029464021	3300005764	Tropical Forest Soil	MYAGNAVLNAVNVQAALGQLDLLPLQVADLGGPQAMPIGDQDHCRVAMAVATILASGIHQPLDLALGEIASLDCQVYDGWCAF
Ga0066903_1044786421	3300005764	Tropical Forest Soil	VNVEAALGQFDLVPLQVAHLGGPQAVAIGDQDHGRVAMPIAGVLAGAVHQALDLALREIASLDCQVYDAWSAVLGCRFHADKPCLRSLLYILYAFFSQS*
Ga0066903_1064556671	3300005764	Tropical Forest Soil	MYAGNPILDAVNVQATLGQLDLLPLQVADLRGSQAVPIGDQDHGRVAMPVAAVLAGTVHQPLDLALGEVASLNCQIYDAWRAFLG
Ga0066903_1083137161	3300005764	Tropical Forest Soil	MGLIVQAALGQLDLLPLQVAHLGGPQTVAIGDKDHGRVAMAVAAVLASAVHQSLDLALGEIAPLDCQVYDAWCAFLGCRF
Ga0081540_10992951	3300005983	Tabebuia Heterophylla Rhizosphere	VDAGDSILHPVNVQAALGQLDLLPLQVADLGGPQTVAIGDQDHGRVAMPVAAMLSGAVHQALDLALGEIASLDCQVYDAWGA
Ga0126380_109453663	3300010043	Tropical Forest Soil	VNVQAGLGKLDLLPLQVAHLGGPQAVAICDKDHGRVAMPVAAMLSGAVHQPLDLALGEIAPLDCQVYDAWCAFLGCRFHADKPCLRVSYCIGY
Ga0126379_122632031	3300010366	Tropical Forest Soil	LGNPVLDAVNVEAALGQLDLLPLQVADLRRPQAMAVGDQDHGRIAMPVAAMLSGAVHQALDLALGEIAPLDCQVYDAWG
Ga0150984_1050373063	3300012469	Avena Fatua Rhizosphere	MYAWDPVLDPVNVQVALRQLDLLPLQVADFRRPQTVAISHQDHRCVAMTVATEPASTVHQPFDLALGEIASFDCQVFGCLVGVSQMSISSQ*
Ga0164298_105921222	3300012955	Soil	MPLQVADLRRPQTVAKGDQDHRRVAMPIAAILASSVYQPLDLALGEITPFDCQVYDAWNAFLGCRFHADKLSLRVSDCKSYASFLHSQSESNRR*
Ga0182036_113624571	3300016270	Soil	VNVQAALGQLDLLPLQGADLRRPQAMAVGDQHHGRVAMAVAAMLSGAVHQPLDLALGEVAPLDCQVYDAWGAFLGCRFHADKLCLR
Ga0182037_106576611	3300016404	Soil	MYAGNPVLDTVNVKAAFGQFDLLPLQVADLRRPQAMAVGRQDHGRVAMPIAAMLSGTVHQPLDLALGEVAPLDCQVYDAWGAFLGCRFHADKL
Ga0182039_106383772	3300016422	Soil	MYAGNPALDTVNVKAALGQFDLLPLQVADLRGPQAMAVGHQDHGRVAMPIAAMLAGAVHQALDLALREIASLDCQVYDVWGAYLGCRFHADKLCLRIAGCLA
Ga0182039_113305912	3300016422	Soil	MYAGNTAFDAVNVQATPGQLDLLPLQVAHLRGPQTVTIGDQDHGRVAMAVPAVFAGAVHQALDLVFGEIASLDCQVYGGCS
Ga0209799_11098092	3300027654	Tropical Forest Soil	AALGQLDLLPLQVADFRGPQTVAIGDKDHGRVAMPIAAMLSGAVHQALDLALGEIAPSNCQIYDVWCAFPGSRFHRGKTSLLDVE
Ga0318541_103380963	3300031545	Soil	VNVKAALGQFDLLPLQIADLRGPQTVAISDQDHGRVAMPIAAVLARAVHQALDLVFGEIASLDCQVYGGWFAFLGYRFHADKLCLRVS
Ga0318541_105122301	3300031545	Soil	MYAGNPVLDAVNVKAALRQFDLLPLQVADLGGPQTVAVGDQDHGRVAMPIAVVLTRAVHQALDLALGEIASLDCQVYDA
Ga0318528_103902792	3300031561	Soil	VHAGNPILDTVNVKAALGQFDLLPLQIADLRGPQTVAISDQDHGRVAMPIAAVLARAVHQALDLVFGEIASLDCQVYGGWFAFLGYRFHADKLCLRVS
Ga0310915_101778082	3300031573	Soil	VDAGDSILHPVNVQAAFGQLDLLPLQVAHLRGPQAVAIGDQDHGRVAMPIAAVLTRAVHQPLDLALGEVAPLDCQVYDAWG
Ga0310915_104889532	3300031573	Soil	MYAGNPALDTVNVKAALGQFDLLPLQVADLRGPQAMAVGHQDHGRVAMPIAAMLAGAVHQALDLALREIASLDCQVYDVWGAYLGCRFHADKLCLRIAGCLAYTHLLNSSVNRALHRAAH
Ga0310915_105378483	3300031573	Soil	VNVQAALGELDLLPLQVADLGGPQAVAIGDKDHGRVAMPIAAMLAGAVYQPVDLALGEVAPLDCQV
Ga0310915_109830182	3300031573	Soil	MYAGNPVLDPMNVEAALGQLDLLPLQVAHLGGPQTVAVGHQDHGRIAMAVAAMLSGAVHQPLDLALGEVAPLDCQVYDAWCAFLGCRFHADKLCLRVPYCICYRPLLNSQKR
Ga0318574_105522482	3300031680	Soil	VDAGDSILDPVNVQAALGQFDLLPLQVADFRRPQAMAVGDQHHGRVAMPIAAMLAGAVHQPLDLALGEIAPFNCQVYDAWGAFLGYRFHADKPCLRLPYCIGYMLFLHSRKGTQAS
Ga0318572_106768081	3300031681	Soil	MNVEAALGELDLLPLQVADLRGSQAVAIGDKDHGRVAMPIAAVLARAVHQALDLAPGEIASLDCQVYDAWCAFLGCRFHADKLCLRVSYCIGYTHLL
Ga0318560_105982372	3300031682	Soil	MYAGNPVLDPVNVQAALGELDLLPLQVADLGGPQAVAIGDKDHGRVAMPIAAMLAGAVYQPVDLALGEVAPLDCQVYDAWCAFLGCRFHAGKPCLRVSY
Ga0318560_107545292	3300031682	Soil	VHTGDSVLDPVNVQAALGQLDLLPLQVADLRRPQAMAVGDQHHGRVAMAVAAMLSGAVHQPLDLALGEVAPLDCQVYDAWGAF
Ga0306917_101700612	3300031719	Soil	VNVQAALGQLDLLPLQVADLGGPQAVAVGDQDHGRIPMPVAAMLSGAVHQPLNLALGEVAPLDYQVYDAWCAFLGCRFHRGKTFLLAVE
Ga0306917_102688322	3300031719	Soil	LHAGDPIFDAVNVQAALGELDLLPLQVAHLGGPQTVAVDHQDHGRIAMAVAAMLAGAVHQALDLALGEVAPLDCQVYDAWGAFLGCRFHRNKTSVFDVSSQLMALFFTV
Ga0318493_107320812	3300031723	Soil	VHTGDSVLDPVNVQAALGQLDLLPLQVARLGGPQAMAVGDQDHGRIPMPVAAMLSGAVHQPLNLALGEVAPLDCQVYDAWAAF
Ga0318500_100254164	3300031724	Soil	SSTPPKVLEADSILHPVNVQAALGEFDLLPLEVADLRGSQAVAVDDQDHGRIAMPVAAMLAGTVHQPLDLALGEVAPLDCQVYDAWCAFFGCRFHADKLCLRVCYCI
Ga0318500_104371302	3300031724	Soil	VNVQAALGQLDLLPLQVADLRGPQTVAIGDKDHGRVAMPVAAVLARAVHQALDLAVGEVAPLDCQVYDAWGAFLGCRFHADKLCLRVCRLFI
Ga0318501_100922994	3300031736	Soil	VHAGNPILDTVNVKAALGQFDLLPLQIADLRGPQTVAISDQDHGRVAMPIAAVLARAVHQALDLVFGEIASLDCQVYGGWSAVLG
Ga0318492_105978862	3300031748	Soil	VHTGDSVLDPVNVQAALGQLDLLPLQGADLRRPQAMAVGDQHHGRVAMAVAAMLSGAVHQPLDLALGEVAPLDCQVYDAWGAFLGCRFHAGKPCLRVSYCICYT
Ga0318509_103205941	3300031768	Soil	MYAGNPALDTVNVKAALGQFDLLPLQVADLRGPQAMAVGHQDHGRVAMPIAAMLAGAVHQPLNLALGEVAPLDCQVYDAWCAFLGCR
Ga0318509_106623522	3300031768	Soil	VNVQAALGELDLLPLQVADLGGPQAVAIGDKDHGRVAMPIAAMLAGAVYQPVDLALGEVAPLDCQVYDAWCAF
Ga0318521_108643781	3300031770	Soil	MGLIGFPRLHAGDSVLDPVNVQPALGQLDLLPLQVADFRRPQAVAVGDQDHGRVAMPIAAARAVHQPLDLGLGEIASLDCQVYDAWCAFFGCRFHADKLCLRIADCLAYTRLLHSLAHVARIID
Ga0318546_111016831	3300031771	Soil	MGLIGFPRLHAGDSVLDPVNVQPALGQLDLLPLQVADFRRPQAVAVGDQDHGRVAMPIAAARAVHQPLDLGLGEIASLDCQVYDAWCAFFGCRFHADKLCLRIADCLAYTRLLHSLAHVARIIDAAAS
Ga0318566_103077002	3300031779	Soil	MQATLGEFDLLPLQVAHLGGPQTMAIGDQDHGRVAMPIAAVLAGAVHQPLDLALGEIAPLDCQVYGGWTAVLGSRFHRGKTLILDTE
Ga0318508_10978591	3300031780	Soil	MYAGNPVLDTVNVKAAFGQFDLLPLQVADLRRPQAMAVGRQDHGRVAMPIAAMLSGTVHQPLDLALGEVAPLDCQVYDAWGAFLGCRFH
Ga0318503_101830932	3300031794	Soil	VNVQAALGEFDLLPLQVAHLRGLQTMAIGHQDHGRVAMPIPAMLAGAVHQPLDLALGEVAPLDCQVYDTWGA
Ga0318550_101003962	3300031797	Soil	LDLLPLQVADLRGPQAVAIGDKDHGRVAMPIAAMLAGAVHQALDLALGEIASLDCQVYDAWCGFLGCRFHADKLCLRVADCLA
Ga0318550_105558731	3300031797	Soil	VNVKAALGQFDLLPLQIADLRGPQTVAISDQDHGRVAMPIAAVLARAVHQALDLVFGEIASLDCQVYG
Ga0318523_105878711	3300031798	Soil	VNVQAALGQLDLLPLQVADLRGPQTVAIGDKDHGRVAMPVAAVLARAVHQALDLALGEIASLDCQVYDAWCAFFGCRFHAD
Ga0318512_102019443	3300031846	Soil	VDAGNPILDTVNVKAALGQLDLLPLQVAHLGGPQAVAIGDQDHGRVAMPIAAVLARAVHQALDLALGEIASLDCQVYDAWCAFLGCRFHADKPCLRLPTI
Ga0306919_100539162	3300031879	Soil	VDAGDSILDPVNVQAGLGKLDLLPLQVADLRGPQAVAIGDKDHGRVAMPIAAMLAGAVHQALDLALGEIASLDCQVYDAWCGFLGCRFHADKLCLRVADCLA
Ga0306919_108906201	3300031879	Soil	VNVQAALGEIDLLPLQVAHLRGPETMAIGDQDHGRVAMPIAAVLAGAVHQPLDLALGEVSPLDCQVYDAWGAFLGCRF
Ga0306925_102724234	3300031890	Soil	MYAGNTAFDAVNVQATPGQLDLLPLQVAHLRGPQTVTIGDQDHGRVAMAVPAVFAGAVHQALDLVFGEIASLDCQVYGGCSALLGSRFHRGKTFLLAVE
Ga0306925_106012802	3300031890	Soil	VHTGDSVLDPVNVQAALGQLDLLPLQVARLGGPQAMAVGDQDHGRIPMPVAAMLSGAVHQPLNLALGEVAPLDCQVYDAWAAFPGCRFHRGKTSLLNVE
Ga0306925_112646911	3300031890	Soil	VHTGDSVLDPVNVQAALGQLDLLPLQVADLGGPQAVAVGDQDHGRIPMPVAAMLSGAVHQPLNLALGEV
Ga0306925_115962531	3300031890	Soil	VQAALRELDLLPLQVAHLRGPQAMAVGHQDHGRVAMPVAAMLAGPVHQALDLALGEVAPLDCQVYDAWCA
Ga0318551_103546892	3300031896	Soil	MYAGNPALDTVNVKAALGQFDLLPLQVADLRGPQAMAVGHQDHGRVAMPIAAMLAGAVHQPLNLALGEVAPLDCQVYDAWCAFLGCRFH
Ga0306921_117659862	3300031912	Soil	VHTGDSVLDPVNVQAALGQLDLLPLQVADLGGPQAVAVGDQDHGRIPMPVAAMLSGAVHQPLNLALGEVAPLDCQV
Ga0306921_121009302	3300031912	Soil	MGLIGFPRLHAGDSVLDPVNVQPALGQLDLLPLQVADFRRPQAVAVGDQDHGRVAMPIAAARAVHQPLDLGLGEIASLDCQVYDAWCA
Ga0306921_122811492	3300031912	Soil	MHTGNAVLDAVNVQAALGQLDLLPLQVAHLGGPQTVAISDQDHSRIAMAVAAMLAGAVHQPLDLALGEIAPLDCQVYDAWDAFLGCRFHADKLCLRVSYCIDYTSFL
Ga0310912_106408742	3300031941	Soil	MYAGDPVLDPVNVQAALGEFDLLPLQVADLRGPQAMAVGDQDHGRIPMPVAAMLSGAVHQPLNLALGEVAPLDCQVYDAWCAFFGCRFHADKPRLRVSYCMAYRLFFKQS
Ga0310916_104820802	3300031942	Soil	VHTGDSVLDPVNVQAALGQLDLLPLQVADLRRPQAMAVGDQDHGRIPMPVAAMLSGAVHQPVDLALGEVAPLDCQVYDAW
Ga0310913_109871791	3300031945	Soil	VRDSVLDPVNVEAALGELDLLPLQVADLRGPQTMAIGDQDHGRVTMPVAAMLAGAVHQPLDLALGEVAPL
Ga0310910_101085181	3300031946	Soil	VQTALGQLDLLPLQVAGLRRPQAMAVGHQDHGRVAMPVAAMLSGAVHQTLDLALGEVAPLDCQVYDAWCAFLGCRFHRGKTSLLDVE
Ga0310910_102661871	3300031946	Soil	VHAGDPVLDAVNVQAALGQLDLLPLQVADLRGPQTVAIGDKDHGRVAMPVAAVLARAVHQALDLAVGEVAPLDCQVYDAWGAFLGCRFHADK
Ga0306926_113138952	3300031954	Soil	MYAGNPALDTVNVKAALGQFDLLPLQVADLRGPQAMAVGHQDHGRVAMPIAAMLAGAVHQPLNLALGEVAPLDCQVYDAWCAFLGCRFHAGKPCLR
Ga0306926_118522711	3300031954	Soil	DWVDAGDSILQPVNVQAALGELDLLPLQVAHLGGPQTVAIGDQDHGRVAMPGTAMLAGAVHQPLDLALGEIASFDCQIFGVWREFSGSWFHRDKSALFPMH
Ga0306926_118735321	3300031954	Soil	MNVEAALGQLDLLPLQVADLRRPQAMAVGHQDHGRVTMPVAAMLAGAVHQPLDLALGEVAPLDCQVYDARGAFLGCRFHADKLCLR
Ga0306926_120727662	3300031954	Soil	MASWRPHLVTADWVDTGDPVLDPVNVQAALGELDLLPLQVADLRRPQAMAVGHEDHGRVAMPIPAMLAGAVHQPVDLALGEVAPSNCQIFGVWREFSGSRFHRNKSALAPCTD
Ga0306926_124717582	3300031954	Soil	VHAGDPVLDAVNVQAALGQLDLLPLQVADLRGPQTVAIGDKDHGRVAMPVAAVLARAVHQALDLAVGEVAPLDCQVYDAWGAFLGCRFHADKLCLRVADCLS
Ga0306922_108462001	3300032001	Soil	MNVEAALGQLDLLPLQVADLRRPQAMAVGDQDHGRIPMPVAAMLSGAVHQPLNLALGEVSPLDC
Ga0310911_102571651	3300032035	Soil	VHTGDSVLDPVNVQAALGQLDLLPLQVADLGGPQAVAVGDQDHGRIPMPVAAMLSGAVHQPLNLALGEVAPLDCQVY
Ga0318545_103131201	3300032042	Soil	VHTGDSVLDPVNVQAALGQLDLLPLQVADLRRPQAMAVGDQHHGRVAMAVAAMLSGAVHQPVDLALGEVAPLDCQVYDAWG
Ga0318556_101161913	3300032043	Soil	VDAGNPILDTVNVKAALGQLDLLPLQVAHLGGPQAVAIGDQDHGRVAMPIAAVLARAVHQALDLALGEIASLDCQVYDAWCAFFGC
Ga0318556_106713892	3300032043	Soil	VHTGDSVLDPVNVQAALGQLDLLPLQVADLRRPQAMAVGDQHHGRVAMAVAAMLSGAVHQPVDLALGEVAPLD
Ga0318558_102146162	3300032044	Soil	MYAGNPALDTVNVKAALGQFDLLPLQVADLRGPQAMAVGHQDHGRVAMPIAAMLSGALHQPVDLALGEVAPLDCQVYDAWGAFLGCRFHA
Ga0318532_102859422	3300032051	Soil	MNVEAALGQLDLLPLQVADLRRPQAMAVGHQDHGRVTMPVAAMLAGAVHQPLDLALGEVAPLDCQVYDARGAFLGCRFHADKLCLRAFHC
Ga0318575_102320681	3300032055	Soil	VHTGNSVLDPVNVQAALGEFDLLPLEVAHLGGPQAMAVGDQDHGRIPMPVAAMLAGAVHQPLNLALGEVAPLDCQVYDAWCAFLGCRFHRGKTFLLAVEWLTYTPFLHSRI
Ga0318575_103834012	3300032055	Soil	VNVEATLGELDLLPLQVADLRCPQTVAVGHKDHGRVAMAVAAMLPGAVHQPVDLALGEVSPLDCQVYDAWGAFLGCRFHADKLCLRVADCLAYTPFLHSRK
Ga0318533_112436782	3300032059	Soil	VHTGDSVLDPVNVQAALGQLDLLPLQGADLRRPQAMAVGDQHHGRVAMAVAAMLSGAVHQPLDLALGEVAPLDCQVYDAWGAFLGCR
Ga0318505_101630181	3300032060	Soil	ALGQLDLLPLQVADLRGPQAVAIGDKDHGRVAMPIAAMLAGAVHQALDLALGEIASLDCQVYDAWCGFLGCRFHADKLCLRVADCLA
Ga0318513_103174972	3300032065	Soil	MYAGNPVLDAVNVKAALRQFDLLPLQVADLGGPQTVAVGDQDHGRVAMPVAAMLAGAVHQPVDLALGEIASLDCRVYDAWYAFFGCR
Ga0318514_102652393	3300032066	Soil	VHAGDPVLDAVNVQAALGQLDLLPLQVADLRGPQTVAIGDKDHGRVAMPVAAVLARAVHQALDLAVGEVAPLDCQVYDAWGAFLGCRFHADKLCLRVAD
Ga0306924_108596261	3300032076	Soil	HLVTADWVDAGDSILHPVNVEATLGELNLLPLQVADLRCPQTVAIGDKDHGHVAMPIPAMLSDAVHQPVDLALGEVAPLDCQV
Ga0306924_117637221	3300032076	Soil	VDAGDSILHPVNVQAAFGQLDLLPLQVAHLRGPQAVAIGDQDHGRVAMPIAAVLTRAVHQPLDLALGEVAPLDCQV
Ga0318577_100513145	3300032091	Soil	MYAGNTAFDAVNVQATLGQLDLLPLQVADLRGPETVAIGDQDHGRIAMTVTAVLASAIHQALDLALGEIASLDCQVYDTWCAFFGPRFHRNKAPFFDADWLAYTQGAA
Ga0318540_101890311	3300032094	Soil	LLPLQVADLRGPQTVAIGDKDHGRIAMAVAAMLSGAVHQPLDFALGEIASFNCQVYDVWSALLGSRFHRGKTFFLDVE
Ga0306920_1002651731	3300032261	Soil	VHAADFVLDPVNVQAALGEFDLLPLQVADFRRPQAMAVGDQHHGRVAMPIAAMLSGAVHQPLDLALGE
Ga0306920_1003339645	3300032261	Soil	DAVNVQTALGQLDLLPLQVAGLRRPQAMAVGHQDHGRVAMPVAAMLSGAVHQTLDLALGEVAPLDCQVYDAWCAFLGCRFHRGKTSLLDVE
Ga0306920_1025781941	3300032261	Soil	VNVQAALGQLDLLPLQGADLRRPQAMAVGDQHHGRVAMAVAAMLSGAVHQPLDLALGEVAPLDCQVYDAWGAFLGCRFHA
Ga0306920_1032564201	3300032261	Soil	MNVEAALGQLDLLPLQVADLRRPQAMAVGHQDHGRVTMPVAAMLAGAVHQPLDLALGEVAPLDCQVY
Ga0306920_1038531002	3300032261	Soil	VHAGDPVLDAVNVQAALGQLDLLPLQVADLRGPQTVAIGDKDHGRVAMPVAAVLARAVHQALDLAVGEVAPLDCQVYDAWGAFLGCRFHADKLCLRV
Ga0310914_101142391	3300033289	Soil	AALGQLDLLPLQVADLRGPQAVAIGDKDHGRVAMPIAAMLAGAVHQALDLALGEIASLDCQVYDAWCGFLGCRFHADKLCLRVADCLA
Ga0310914_101242141	3300033289	Soil	NVQTALGQLDLLPLQVAGLRRPQAMAVGHQDHGRVAMPVAAMLSGAVHQTLDLALGEVAPLDCQVYDAWCAFLGCRFHRGKTSLLDVE
Ga0310914_105858411	3300033289	Soil	MHAGDSILDPVNVQAALGQLDLLPLQVTHLGGPQTVAIGDQDHGRVAMPVAAMLSGAVHQLLNLALGEIAPPDCQVYDAWGAFLGCRFHADKPSLRVPYCISETYLLNSRSIATSPR
Ga0310914_108323781	3300033289	Soil	MYAGNPALDTVNVKAALGQFDLLPLQVADLRGPQAMAVGHQDHGRVAMPIAAMLAGAVHQPLNLALGEVAPLDCQVYDAWCAFLG
Ga0310914_113970442	3300033289	Soil	ADWVDAGDSFLHPVNVQAALGQLDLLPLQVADLRRPQAMAVGHEDHGRIAMAVAAMLAGAVYQPVDLALGEIAPLDCQVYDA
Ga0318519_102106863	3300033290	Soil	MYAGNTAFDAVNVQATLGQLDLLPLQVADLRGPETVAIGDQDHGRIAMTVTAVLASAIHQALDLALGEIASLDCQVYDTWCAFFGPRFHRNKAPFFDADWIA
Ga0318519_104170244	3300033290	Soil	MYAGGPVLDAVNVQTALGELDLVPLQVAHLGGPQTVTIGDKDRGRVAMPIAAMLSGAVHQPVDLALGEVAPLDCQVYDAWG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102277

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences