Metagenome / Metatranscriptome Family F102252

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102252
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	51 residues
Representative Sequence	LVDNDENGEGQRAAEQCRRIWKATGRTVVPLIPKQRGWDFNDVVLGRKV
Number of Associated Samples	70
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.99 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (99.010 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (52.475 % of family members)
Environment Ontology (ENVO)	Unclassified (85.149 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.475 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1Ga0066395_102434172 2Ga0066388_1000614579 3Ga0066388_1027350961 4Ga0008090_156326422 5Ga0066903_1005170081 6Ga0066903_1033282951 7Ga0066903_1086399972 8Ga0126379_125375821 9Ga0126381_1036088461 10Ga0126383_134356231 11Ga0126369_114592532 12Ga0126369_122525672 13Ga0157376_117368911 14Ga0132255_1002140051 15Ga0182036_111397711 16Ga0182036_114979591 17Ga0182036_117309801 18Ga0182041_109614351 19Ga0182041_113200202 20Ga0182041_115515272 21Ga0182033_113376981 22Ga0182035_112926332 23Ga0182032_118073272 24Ga0182034_100105279 25Ga0182040_114537681 26Ga0182040_117598391 27Ga0182037_110490413 28Ga0182039_104821412 29Ga0182039_105379942 30Ga0182038_101598151 31Ga0182038_108212751 32Ga0182038_119179391 33Ga0126371_138042352 34Ga0318541_100335521 35Ga0318538_101771642 36Ga0318538_101996772 37Ga0318528_101216731 38Ga0318528_103433752 39Ga0318528_107241071 40Ga0318515_101026062 41Ga0318515_102756752 42Ga0310915_104498922 43Ga0310915_105765082 44Ga0318574_108152592 45Ga0318560_105032081 46Ga0306917_112581051 47Ga0306917_113303212 48Ga0318493_101335992 49Ga0318500_104639902 50Ga0306918_109417962 51Ga0318494_101097571 52Ga0318554_100537642 53Ga0318509_103107653 54Ga0318521_110146851 55Ga0318547_101611761 56Ga0318547_103852911 57Ga0318547_107958311 58Ga0318552_104428791 59Ga0318529_104792201 60Ga0318564_100838622 61Ga0318499_104019511 62Ga0310917_103083622 63Ga0318517_102651301 64Ga0318495_104215151 65Ga0318495_105320431 66Ga0306925_107777141 67Ga0318536_102606621 68Ga0318536_104914672 69Ga0318522_102334532 70Ga0306923_100900776 71Ga0306921_117144221 72Ga0306921_127423901 73Ga0310912_107476212 74Ga0306926_110996651 75Ga0318530_105039651 76Ga0318531_102420491 77Ga0318531_102885422 78Ga0306922_108605152 79Ga0306922_119482271 80Ga0306922_122083452 81Ga0318569_103565501 82Ga0310911_102191272 83Ga0318559_104048482 84Ga0318570_103856932 85Ga0318575_105468952 86Ga0318533_109885202 87Ga0318533_111162422 88Ga0318510_102426253 89Ga0318513_100688251 90Ga0318524_102671251 91Ga0306924_115700922 92Ga0306924_119761961 93Ga0318518_106802032 94Ga0318577_101042661 95Ga0318540_103218331 96Ga0318540_105203581 97Ga0306920_1000665751 98Ga0306920_1037010341 99Ga0310914_115356761 100Ga0318519_106963061 101Ga0318519_110586301
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1Ga0066395_102434172 2Ga0066388_1027350961 3Ga0066903_1005170081 4Ga0066903_1033282951 5Ga0066903_1086399972 6Ga0126381_1036088461 7Ga0157376_117368911 8Ga0182036_114979591 9Ga0182041_115515272 10Ga0182035_112926332 11Ga0182034_100105279 12Ga0182040_117598391 13Ga0182039_105379942 14Ga0182038_119179391 15Ga0318541_100335521 16Ga0318538_101771642 17Ga0318538_101996772 18Ga0318574_108152592 19Ga0306917_113303212 20Ga0318494_101097571 21Ga0318552_104428791 22Ga0318499_104019511 23Ga0318536_102606621 24Ga0306923_100900776 25Ga0306921_117144221 26Ga0306921_127423901 27Ga0310912_107476212 28Ga0306922_119482271
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48. 1Ga0318509_103107653 2Ga0066395_102434172 3Ga0066388_1027350961 4Ga0008090_156326422 5Ga0066903_1033282951 6Ga0066903_1086399972 7Ga0126383_134356231 8Ga0126369_114592532 9Ga0126369_122525672 10Ga0182041_115515272 11Ga0182035_112926332 12Ga0182040_117598391 13Ga0182038_119179391 14Ga0126371_138042352 15Ga0318538_101996772 16Ga0318528_107241071 17Ga0318515_101026062 18Ga0306917_113303212 19Ga0318500_104639902 20Ga0318521_110146851 21Ga0318552_104428791 22Ga0318495_104215151 23Ga0318495_105320431 24Ga0318536_104914672 25Ga0306921_117144221 26Ga0306921_127423901 27Ga0306926_110996651 28Ga0306922_119482271 29Ga0310911_102191272 30Ga0318533_111162422 31Ga0318524_102671251 32Ga0306924_119761961 33Ga0318577_101042661 34Ga0318540_103218331 35Ga0310914_115356761 36Ga0318519_110586301
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.27% β-sheet: 2.60% Coil/Unstructured: 70.13%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13362	Toprim_3	1.98
PF05119	Terminase_4	0.99
PF00994	MoCF_biosynth	0.99
PF07508	Recombinase	0.99
PF00589	Phage_integrase	0.99

Showing 1 to 5 of 5 entries

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COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.99
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	0.99 %
Unclassified	root	N/A	99.01 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	0.99 %
Unclassified	root	N/A	99.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.99 %
Unclassified	root	N/A	99.01 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %
Unclassified	root	N/A	99.01 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100061457	All Organisms → cellular organisms → Bacteria → Proteobacteria	3984	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.02%
Host-Associated	Host-Associated	1.98%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	1.98%
Terrestrial	Environmental → Terrestrial	98.02%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil	98.02%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	5.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	85.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.94%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.99%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	52.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.94%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.99%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M

Showing 1 to 10 of 70 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_102434172	3300004633	Tropical Forest Soil	LVDNDENGEGQKAAACCRQTWTATGRTVVPLIPKHVGWDFNDVVLRRKA*
Ga0066388_1000614579	3300005332	Tropical Forest Soil	LLVDNDENGEGQKAAAHCRQVWDAAGRTVAALVPKHVGWDFNDEVLGRKA*
Ga0066388_1027350961	3300005332	Tropical Forest Soil	RLILLVDNDENNVSQSAAEVCRRVWSSAGRTAVPLVPKQRGWDFNDVVLGRKA*
Ga0008090_156326422	3300005363	Tropical Rainforest Soil	LLVDNDENGEGQNAAAHCRQVWTAAGRTVVPLIPKQKGLDFNDVVLGRKS*
Ga0066903_1005170081	3300005764	Tropical Forest Soil	NDENYEGQNAAERCQRIWKSAGRTTVPLIPKQKGWDFNDVVLGRKA*
Ga0066903_1033282951	3300005764	Tropical Forest Soil	DANGEGQKAAACCRDKWTAAGRAVVPLIPKTKGWDFNDVVLRGSKQ*
Ga0066903_1086399972	3300005764	Tropical Forest Soil	LVDHDINGEGQKAAEHCRQAWSNSGRTVVPLIPKQQGFDFNDVILGRLA*
Ga0126379_125375821	3300010366	Tropical Forest Soil	NDENYEGQQAAERCQRIWKSAGRATMPLIPKQKGWDFNDVVLGRKA*
Ga0126381_1036088461	3300010376	Tropical Forest Soil	NDENGEGQKAAAHCRQIWAAAGRSVAALVPKHAGWDFNDEILGRKA*
Ga0126383_134356231	3300010398	Tropical Forest Soil	NDENGEGQKASGHCRQTWIAAGRTVAALVPKQVGWDFNDVVLGKKT*
Ga0126369_114592532	3300012971	Tropical Forest Soil	LIDNDENYEGQQAAERCQRIWKSAGRATMPLIPKQKGWDFNDVVLGRKA*
Ga0126369_122525672	3300012971	Tropical Forest Soil	DNDENNEGQRAAELCQQIWKSAGRTTVLLIPKQKGWDFNDVVLGKKA*
Ga0157376_117368911	3300014969	Miscanthus Rhizosphere	AAERCRQVWRAMGRNVVPLVPKQAGWDFNDVVLGRRA*
Ga0132255_1002140051	3300015374	Arabidopsis Rhizosphere	DENGEGQKAAERCRQVWRAMGRNVVPLVPKQVGWDFNDVVLGRRV*
Ga0182036_111397711	3300016270	Soil	NGEGQKAAAHCRQVWTAAGRTVAALVPKHVGWDFNDVVLGRKA
Ga0182036_114979591	3300016270	Soil	LLVDNDENGEGQRAAEQCRRIWKAAGRITVPLIPKQRGWDFNDVVCGRKI
Ga0182036_117309801	3300016270	Soil	GEGQKAAAHCRQIWTAAGRTVTALVPKQTGWDFNDVVLGRKA
Ga0182041_109614351	3300016294	Soil	VDNDENYEGQQAAERCQRIWKSADRTTVPLIPKQKGWDFNDVVLGRKA
Ga0182041_113200202	3300016294	Soil	VDNDENYEGQQAAERCQRIWKSADRTTVPLIPKQKGWDFNDVVLGKKV
Ga0182041_115515272	3300016294	Soil	VDNDENGEGQKAAERCRQLWRAAGRAVAALVPKQAGWDFNDVVLRSRA
Ga0182033_113376981	3300016319	Soil	NDENGEGQKAAAHCRQIWTAAGRTVAALVPKHAGWDFNDEVLGRKA
Ga0182035_112926332	3300016341	Soil	LILLVDHAENGEGQKAAARSKQVWCAAGRTVEPLIPKQPGWDFNDVVLGRKA
Ga0182032_118073272	3300016357	Soil	EGQRAAEQCRRVWKAAGRITVPLIPKQRGWDFNDVVLGRKV
Ga0182034_100105279	3300016371	Soil	RLPTTISAARLILLVDNDENGEGQRAAEQCRRVWKAVGRTVVPLIPKQRGWDFNDVVLGRKA
Ga0182040_114537681	3300016387	Soil	LLVDNDENGEGQKAVAHCRQTWSAAGRTVAALVPKQAGWDFNDVVLGRKI
Ga0182040_117598391	3300016387	Soil	NGEGQKAAARCQQVWRAAGRTVVPLMPNQCGWDFNDVVLGRPV
Ga0182037_110490413	3300016404	Soil	NGEGQKAAAQCRQIWVAAGRTVAALVPKHTGWDFNDEVLGRKA
Ga0182039_104821412	3300016422	Soil	GIGRLPMLPRVERLILLVDNDENGEGQRAAEQCRRIWKAAGRITVPLIPKQRGWDFNDVVCGRKI
Ga0182039_105379942	3300016422	Soil	LTVGELILLVDNDENGEGQKAATHCRLWSAAGRTVIPLVPKHVGWDFNDVVLGRKA
Ga0182038_101598151	3300016445	Soil	LVDHDENGEGQRAAEQCRQIWTSAGRTTVPLIPKQKGWDFNDVVLGRKA
Ga0182038_108212751	3300016445	Soil	ENGEGQRAAEQCRRAWKAAGRITVPLIPKQRGWDFNDVVLGRKT
Ga0182038_119179391	3300016445	Soil	VLPDVRLLILLVDNDENGEGQKAAERCRQVWRAMGRNVVPLVPKQVGWDFNDVVLGRRA
Ga0126371_138042352	3300021560	Tropical Forest Soil	DENGAGQKAAAHCRQIWAAAGRSVAALVPKHGGWDFNDEVLGRKA
Ga0318541_100335521	3300031545	Soil	RFPPLRGVEHLILLVDHDENGEGQRAAGLCRRIWRSAGRTAVPLIPKHKSWDFNDVVLGRKA
Ga0318538_101771642	3300031546	Soil	EGQKAVAHCRQTWIAAGRTVAALVPKQAGWDFNDVVLGRKA
Ga0318538_101996772	3300031546	Soil	ALSCCCSVDNDENGEGQKAAAQCRQIWVAAGRTVAALVPKHTGWDFNDEVLGRKA
Ga0318528_101216731	3300031561	Soil	QKAAAHCRQIWTAAGRTVAALVPKHAGWDFNDEVLGRKA
Ga0318528_103433752	3300031561	Soil	DENGEGQKAAAHCRQVWDAAGRAVAALVPKHAGWDFNDEVLGRKA
Ga0318528_107241071	3300031561	Soil	DHDENGEGQKAAEQCRRVWKAAGRITVPLIPKQCGWDFNDVVFGRKV
Ga0318515_101026062	3300031572	Soil	LLVDNDENYEGQQAAERCQRIWKSADRTTVPLIPKQKGWDFNDVVLGKKV
Ga0318515_102756752	3300031572	Soil	NSVGQKAAAHCRQIWAAAGRTVAALVPKHAGWDFNDEVLGRKA
Ga0310915_104498922	3300031573	Soil	LILLVDNDENGEGQRAAEQCRRVWKAAGRITVPLIPKQRGWDFNDVAFGRKL
Ga0310915_105765082	3300031573	Soil	ENGEGQKAAACCRQTWTATGRTVVPLIPKHVGWDFNDVVLRRKA
Ga0318574_108152592	3300031680	Soil	HDENGEGQRAAEQGRNIWTAAGRTVVPLIPKQRGWDFNDVILGRKA
Ga0318560_105032081	3300031682	Soil	PLILLVDNDENGEGQRAAEQCRRTWKAAGRITVPLIPKQRGWDFNDVVLGRKA
Ga0306917_112581051	3300031719	Soil	VDNDENGEGQKAATHCRQIWSAAGRTVIPLVPKHVGWDFNDVVLGRKA
Ga0306917_113303212	3300031719	Soil	NDKNGAGQKAAAHCRWVWSAAGRAVVPLLPKQAGWDFNDVILRRPA
Ga0318493_101335992	3300031723	Soil	GQKAAERCRQVWRAMGRDVVPLVPKQAGWDFNDVVLEGRV
Ga0318500_104639902	3300031724	Soil	GLGSLPVLLTVGELILLVDNDENGEGQKAATHCRQIWSAAGRTVIPLVPKHVGWDFNDVVLGRKA
Ga0306918_109417962	3300031744	Soil	NGEGQRAAEQCRRIWKAAGRITVPLIPKQRGWDFNDVVCGRKI
Ga0318494_101097571	3300031751	Soil	HDANGEGQKAAKRCRQVWRAMGRDVVPLVPKQAGWDFNDVVLEGRV
Ga0318554_100537642	3300031765	Soil	VAKGGLGRFPPLRGVEHLILLVDHDENGEGQRAAGLCRRIWRSAGRTAVPLIPKHKSWDFNDVVLGRKA
Ga0318509_103107653	3300031768	Soil	LVDNDENGEGQRAAEQCRRIWKATGRTVVPLIPKQRGWDFNDVVLGRKV
Ga0318521_110146851	3300031770	Soil	PVLPGVSPLILLVDNDENGEGQRAAEQCRRTWKAAGRITVPLIPKQRGWDFNDVVLGRKA
Ga0318547_101611761	3300031781	Soil	PTTISAARLILLVDNDENGEGQRAAEQCRRVWKAVGRTVVPLIPKQRGWDFNDVVLGRKA
Ga0318547_103852911	3300031781	Soil	SPLILLVDNDENGEGQRAAEQCRRVWKAAGRITVPLIPKQRGWDFNDVVLGRKV
Ga0318547_107958311	3300031781	Soil	LVDNDENGEGQRAAEQCRRAWKAAGRIAVPLIPKQRGWDFNDVVFGRKV
Ga0318552_104428791	3300031782	Soil	SQLILLVDNDENGEGQKAAAHCRQVWSAVGRTVAALVPKQERWDFNDVVLGWKA
Ga0318529_104792201	3300031792	Soil	LVDNDENGEGQRAAEQCRHAWKAAGRITVPLIPKQRGWDFNDVVFGRKV
Ga0318564_100838622	3300031831	Soil	WLPVLPDVRRLILLVDHDENGEGQKAAERCRQVWRAMGRNVVPLVPKQVGWDFNDVVLGRRA
Ga0318499_104019511	3300031832	Soil	NGEGQRAAGLCRRIWRSAGRTAVPLIPKHKSWDFNDVVLGRKA
Ga0310917_103083622	3300031833	Soil	NDENGEGQKAAERCRQLWRAAGRAVAALVQKQAGWDFNDVVLRSRA
Ga0318517_102651301	3300031835	Soil	LMDNDENGEGQKAAGHCRQIWVAAGRTVAALVPKHAGWDFNDEILGRKA
Ga0318495_104215151	3300031860	Soil	PLRGVERLILLVDNDENGEGQRAAGLCRRIWRSAGRTAVPLIPKQRGWDFNDVVLGRKV
Ga0318495_105320431	3300031860	Soil	LILLVDNDENGEGQKAAAHCRQVWDAAGRAVAALVPKHAGWDFNDEVLGRKA
Ga0306925_107777141	3300031890	Soil	GGLGRFPPLRGVERLILLVDNDENGEGQRAAGLCRRIWRSAGRTAVPLIPKQRGWDFNDVVFGRKV
Ga0318536_102606621	3300031893	Soil	RLPVLSRVERLILLVDNDENGEGQRAVAHCRQTWIAAGRTVAALIPKQAGWDFNDAVLGRKA
Ga0318536_104914672	3300031893	Soil	ILLVDNDENGAGQRAAEQCRRAWKAAGRITVPLIPKQRDWDFNDVVCGRKL
Ga0318522_102334532	3300031894	Soil	VLPRVERLILLVDHDENGEGQKAVAHCRQTWIAAGRTVAALVPKQAGWDFNDVVLGRKA
Ga0306923_100900776	3300031910	Soil	EGQRAAEQCRRVWKAAGRITVPLIPKQRGWDFNDVAFGRKL
Ga0306921_117144221	3300031912	Soil	PHVRELILLVDHDENGEGQRAAEQCRQIWTSAGRTTVPLIPKQKGWDFNDVVLGRKA
Ga0306921_127423901	3300031912	Soil	LSGVSPLIRRVDNDENGAGPRAAEQCRRAWKAAGRITVPLIPKQRGWDFNDVVLGRKT
Ga0310912_107476212	3300031941	Soil	VAKGGLGRLPVLPGVSPLILLVDNDENGEGQRAAEQCRRVWKAAGRITVPLIPKQRGWDFNDVVLGRKV
Ga0306926_110996651	3300031954	Soil	LGRLPVLPDVARLILLMDNDENGEGQKAAGHCRQIWVAAGRTVAALVPKHAGWDFNDEILGRKA
Ga0318530_105039651	3300031959	Soil	PLRGVERLILLVDNDENEEGQRAAGLCRRIWRSAGRIAVPLIPKHKGWDFNDVVLGRKA
Ga0318531_102420491	3300031981	Soil	LGRFPPLRGVDRLILLVDHDENGEGQRAAGLCRRIWRSAGRTAVPLIPKQRGWDFNDVAFGRKL
Ga0318531_102885422	3300031981	Soil	IVLVDNDENGEGQRAAEQCRRIWKAAGRITVPLIPKQRGWDFNDVVCGRKI
Ga0306922_108605152	3300032001	Soil	VDNDENGEGQRAAEQCRRAWKAAGRITVPLIPKQRGWDFNDVVLGRKT
Ga0306922_119482271	3300032001	Soil	RFILLVDHDENGEGQRAAELAQRIWKSAGRTTVPLIPNQKGWDFNDVVLGKKHERL
Ga0306922_122083452	3300032001	Soil	KCLPVLPGVSPLILLVDNDENGEGQRAAEQCRHAWKAAGRITVPLIPKQRGWDFNDVVFGRKV
Ga0318569_103565501	3300032010	Soil	GGLGRFPPLRGVEHLILLVDHDENGEGQRAAGLCRRIWRSAGRTAVPLIPKHKSWDFNDVVLGRKA
Ga0310911_102191272	3300032035	Soil	VDHDANGEGQKAAKRCRQVWRAMGRDVVPLVPKQAGWDFNDVVLEGRV
Ga0318559_104048482	3300032039	Soil	AAAHCRQVWDAAGRAVAALVPKHAGWDFNDEVLGRKA
Ga0318570_103856932	3300032054	Soil	RLILLVDNDENGEGQRAAEQCRRVWKAAGRITVPLIPKQRGWDFNDVVFGRKT
Ga0318575_105468952	3300032055	Soil	FPPLRGVDRLILLVDHDENGEGQRAAGLCRRIWRSAGRTAVPLIPKQRGWDFNDVAFGRK
Ga0318533_109885202	3300032059	Soil	RLILLVDHDENGEGQRAAGLCRRIWRSAGRTAVPLIPKQQGSDFNDVVLGRKT
Ga0318533_111162422	3300032059	Soil	PGIAQLILLVDNDDNGGGQRAAEQCRRVWKSAGRMTVPLIPKQKGWDFNDVVLGRRV
Ga0318510_102426253	3300032064	Soil	ILLVDNDENGEGQRAAEQCRRIWKATGRTVVPLIPKQRGWDFNDVVLGRKV
Ga0318513_100688251	3300032065	Soil	LVDNDENGEGQRAAEQCRRVWKAAGRITVPLIPKQRGWDFNDVVFGRKT
Ga0318524_102671251	3300032067	Soil	VDNDANGEGLRAAELGQRIWKSAGRTVVPLIPKQQGWDFNDVVLGRKA
Ga0306924_115700922	3300032076	Soil	PDISRLILLVDHDENGEGQRAAEQCRQIWKSAGRTTVPLIPKQKGWDFNDVVLGRKI
Ga0306924_119761961	3300032076	Soil	DIAQLILLVDHDENGEGQRAAEQCRRVWKSAGRIAVPLIPKQKGWDFNDVVLARKA
Ga0318518_106802032	3300032090	Soil	EGQKAATHCRQIWSAAGRTVIPLVPKHVGWDFNDVVLGRKA
Ga0318577_101042661	3300032091	Soil	VLLVDNDENGEGQKAAAHCRQIWTAAGRTVTALVPKQTGWDSNDVVLGRKA
Ga0318540_103218331	3300032094	Soil	DHDENGEGQRAAEQGRNIWTAAGRIVVPLIPKQKGWDFNDVVLGRKA
Ga0318540_105203581	3300032094	Soil	LLVDHDENGEGQRAAEQCRQLWKSAGRTTVPLIPKQKGWDFNDVVLGRKI
Ga0306920_1000665751	3300032261	Soil	LVDNDENGEGQRAAEQCRRIWKAAGRITVPLIPKQRGWDFNDVVCGRKI
Ga0306920_1037010341	3300032261	Soil	VDNDENGEGQRAAEQCRRIWKAAGRIAVPLIPKQRGWDFNDVVLGRKT
Ga0310914_115356761	3300033289	Soil	GLGRFPPLRGVERLILLVDNDENEEGQRAAGLCRRIWRSAGRIAVPLIPKHKGWDFNDVVLGRKA
Ga0318519_106963061	3300033290	Soil	IGRLPMLPRVERLILLVDNDENGEGQRAAEQCRRIWKAAGRITVPLIPKQRGWDFNDVVCGRKI
Ga0318519_110586301	3300033290	Soil	LVDHDENGEGQKAVAHCRQTWIAAGRTVAALVPKQAGWDFNDVVLGRKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters