Metagenome Family F102203

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F102203
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	67 residues
Representative Sequence	MPDDDRRFSVPSPAPERIDLASIKTDLEFAIDQLVRLHRQIARTALGIIFCTAVVTTLLNWWFLTR
Number of Associated Samples	55
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	28.28 %
% of genes near scaffold ends (potentially truncated)	44.55 %
% of genes from short scaffolds (< 2000 bps)	88.12 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (73.267 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (59.406 % of family members)
Environment Ontology (ENVO)	Unclassified (96.040 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (60.396 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
Powered by MSAViewer

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.94% β-sheet: 0.00% Coil/Unstructured: 51.06%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
WebGL does not seem to be available. This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser. For a list of supported browsers, refer to http://caniuse.com/#feat=webgl. Load File(s)

Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00589	Phage_integrase	8.91
PF01381	HTH_3	4.95
PF05598	DUF772	2.97
PF01609	DDE_Tnp_1	1.98
PF13975	gag-asp_proteas	1.98
PF07040	DUF1326	1.98
PF14373	Imm_superinfect	1.98
PF08241	Methyltransf_11	0.99
PF09976	TPR_21	0.99
PF01828	Peptidase_A4	0.99

Showing 1 to 10 of 13 entries

Previous1 2Next

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.98
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.98
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.98
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.98
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.98
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	1.98
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.98
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.99
COG4423	Uncharacterized conserved protein	Function unknown [S]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	26.73 %
Unclassified	root	N/A	73.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	26.73 %
Unclassified	root	N/A	73.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.73 %
Unclassified	root	N/A	73.27 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %
Unclassified	root	N/A	73.27 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.83 %
Unclassified	root	N/A	73.27 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.97 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.99 %
Unclassified	root	N/A	73.27 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.96 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.99 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.99 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.99 %
Unclassified	root	N/A	73.27 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.99 %

Name	Rank	Taxonomy	Distribution
Acidibrevibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidibrevibacterium	0.99 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.99 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.99 %
Croceicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Croceicoccus	0.99 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.99 %
Unclassified	root	N/A	73.27 %

Name	Rank	Taxonomy	Distribution
Acidibrevibacterium fodinaquatile	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidibrevibacterium → Acidibrevibacterium fodinaquatile	0.99 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.99 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.96 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.99 %
Croceicoccus bisphenolivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Croceicoccus → Croceicoccus bisphenolivorans	0.99 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.99 %
Unclassified	root	N/A	73.27 %

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300016294\|Ga0182041_10633370	Not Available	942	Open in IMG/M
3300016294\|Ga0182041_12095620	Not Available	527	Open in IMG/M
3300016319\|Ga0182033_10422772	Not Available	1131	Open in IMG/M
3300016357\|Ga0182032_10777617	Not Available	808	Open in IMG/M
3300016357\|Ga0182032_10915033	Not Available	746	Open in IMG/M
3300016357\|Ga0182032_10928630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300016371\|Ga0182034_10145868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1770	Open in IMG/M
3300016387\|Ga0182040_10088246	Not Available	2069	Open in IMG/M
3300016387\|Ga0182040_10316919	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300016404\|Ga0182037_10739070	Not Available	845	Open in IMG/M

Showing 1 to 10 of 99 entries

Previous1 2 3 4 5…10Next

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	97.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.97%

Habitat	Taxonomy	Distribution
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	59.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.97%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M

Showing 1 to 10 of 55 entries

Previous1 2 3 4 5 6Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0182041_106333703	3300016294	Soil	MPDDDRRFSVPSPAPERIDLASIKTDLEFAIDQLVRLHRQIARTALGIIFCTAVVTICTAATSAPANAEGTR
Ga0182041_120956201	3300016294	Soil	MPDDDRRFSVPSPAPERIDLATIKTDLEFAIEQLARLHTQLAHTALGVIFCTAVVTTLLNWWFLTR
Ga0182033_104227723	3300016319	Soil	VNHRATIIWHTGRMPDEYRLTPPRPDPERIDLAAIKTDLEFATGQLSRLHKQLARTALGIIFCTAAVTTLLDWWLLTR
Ga0182032_107776173	3300016357	Soil	SGIIEAMADDDRHFSVSGHTPERIDLASIKTDLEFAVEQLVRLHRKLARTALGIIFCTAVVTTLLNWWFLTR
Ga0182032_109150331	3300016357	Soil	TPPRPDPERIDLAAIKTDLEFAIRVHKQLARTALGIIFSTSVVTTIFDWWLLVR
Ga0182032_109286302	3300016357	Soil	MFWHTGAMPDDDRRFSVPSPAPERIDLASIKADLEFAIAQLAWLRTQLARSTLGIIFCTAVVTTPFNWWFLTR
Ga0182034_101458683	3300016371	Soil	HLAYGARARRDHRFSGPRPNPEQIDLAAIKADLEFAIEQISRLRTQLARTALGIIFSTSVITTILNWWFLAR
Ga0182040_100882463	3300016387	Soil	MPDDDHRFSGPCPHPEQIDIAAIKTDLEFAIDQISRLHRQLARTALGIIFSTAVITTLLGWCFLAR
Ga0182040_103169191	3300016387	Soil	MFWHTGAMPDDDRRFSAPGPVPERIDLASIKTDLEFANEPLARLQRQLARTALGVIFCTPVVTTLLNW
Ga0182037_107390703	3300016404	Soil	MFWHTGAMPDDDRRFSVPSSAPECIDHAAIMTDLEFSIDQLARLHRRLARTALGIIFCTAVVTTLLNGWFLTR
Ga0182037_111219302	3300016404	Soil	MPDDDRRFSVPSPAPERIDLASIKTDLEFANDQLARLHTQVARTALGVIFCTAVVTTLLNWWFLTR
Ga0182039_104865301	3300016422	Soil	MPDDDHRFFAPRPDPERIDLAAIKSDLEFAIDQISRLQTQLAQTALGIIFATAIVTTALGWWFLAR
Ga0182038_101767082	3300016445	Soil	MPDDDRFFPPRPAPERIELAAIKTDLEFAIGQLSRLHKQLARAALGITFCTAAVTTLLNWWLLSH
Ga0182038_107028541	3300016445	Soil	MPDEYRLTPPRPGPERIDLAAIKTDLEFAIDQIARLHTQLARTALGIIFSTSVISTLLSWWFLAR
Ga0182038_109156542	3300016445	Soil	TGRMPDEYRLTPPRPDPERIDLAAIKTDLEFATGQLSRLHKQLARTALGIIFCTAAVTTLLDWWLLTR
Ga0126371_114956792	3300021560	Tropical Forest Soil	SGPRPNPEQIDLAAIKTDLEFAIEQISRLHTQLARTALGIIFSTSVISTLLSWWFLTR
Ga0126371_115019022	3300021560	Tropical Forest Soil	MPDDDRRFSAPRPDPERIDLAAIKTDLEFSLEQLSRLHKQLARTALGIIFCTAALATALNWWLLAR
Ga0126371_118600162	3300021560	Tropical Forest Soil	MPDDDYRFSVPRPDPERIDLAAIKTDIEFSLEMMSRLHRQLARVALGVIFCTAALTTFLNWWLLAR
Ga0318516_103086571	3300031543	Soil	MPDGDDRFSGPRPGPEQIDLAAIKTDLEFAIDQISRLHTQLARTALGIIFSTSVISTLLSWWFLAR
Ga0318541_100020608	3300031545	Soil	MPDDDHRFSGPCPHPERIDLAAIKTDLEFAIDQISRLHRQLARTALGIIFSTAVITTLLGWCFLAR
Ga0318541_100911912	3300031545	Soil	MPDDDRHFSVPGPTPERIDLASIKTDLEFAIDQLVRLHRQLARTALGIIFCTAVVATLLNWFLTR
Ga0318541_101418912	3300031545	Soil	MFWHTEAMPDDDHRFSVPSPVPERIDLASIKTDLEFAIEQLVRLHTQLARTALGIIFCTAVVTTLLNWWFLTR
Ga0318541_104411192	3300031545	Soil	FSVPSPAPERIDLATIKTDLEFAIEQLARLHTQLARTALGVIFCTAVVTTLLNWWLLAR
Ga0318538_100181422	3300031546	Soil	MPDDDHRFSGPCPHPEQIDLAAIKTDLEFAIDQISRLHRQLARTALGIIFSTAVITTLLGWCFLAR
Ga0318538_102475172	3300031546	Soil	MPDEYRLTPPRPDPERIDLAAIKTDLEFATGQLSRLHKQLARTALGIIFCTAAVTTLLDWWLLTR
Ga0318538_106318091	3300031546	Soil	MPDDDHRFSAPRPNPERIDLGAIKSDLEFVIDEISRLHTQLNQAALGIIFATAIVTTALVWWFTVR
Ga0318538_107002522	3300031546	Soil	MPDDVHRFSVPRPDPERIDLAAIKADVEFSLEMMSRLHKQLSRMALGIIFRTAAVTILLNWWLLTR
Ga0318571_101679081	3300031549	Soil	MFWHTEAMPDDDHRFSVPSPVPERIDLASIKTDLEFAIEQLVRLHTQLARTALGIIFCTAVVTTLLNWWVLTR
Ga0318528_1000106910	3300031561	Soil	MPDDDHRFSGPRPHPEQIDLAAIKTDLEFAIDQILRLHTQLARTALGIIFSTAVITTLLGWCFLAR
Ga0318528_102615762	3300031561	Soil	MPDEYRLTPPRPGPERIDLAAIKTDFEFAIDQISRLHTQLARTALGIIFSTSVISTLLSWWFLAR
Ga0318515_103428711	3300031572	Soil	NGATITWHTVHMPDDDHRFSGPRPHPEQIDLAAIKTDLEFAIDQILRLHTQLARTALGIIFSTAVITTLLGWCFLAR
Ga0318515_105167382	3300031572	Soil	MPDDDRRFSVPSPAPERIDLASIKTDLEFAIDQLVRLHRQIARTALGIIFCTAVVTTLLNWWFLTR
Ga0310915_102677612	3300031573	Soil	MAFIHGATIIWPTVHMPDEYRLTPPRLDPERIDLAEIKTDLEFAIDQISRLHRQLARTAPGIIFSTAVITTLLGWCLLAR
Ga0310915_108297831	3300031573	Soil	LAYRARARRDHRFSGPRPNPEQIDLAAIKADLEFAIEQISRLRTQLARTALGIIFSTSVITTILNWWFLAR
Ga0318542_105973841	3300031668	Soil	MPDDDRRFSVPSPAPERIDLASIKTDLEFAIDQLVRLHRQLARTALGIIFCTAVVATLLNWFLTR
Ga0318561_100392084	3300031679	Soil	MPDDDHRFSGPRPHPEQIDLAAIKTDLEFAIDQISRLHRQLARTALGIIFSTAVITTLLGWCFLAR
Ga0318561_106409752	3300031679	Soil	MPDDDRRFSVPSPAPERIDLATIKTDLEFAIEQLARLHTQLARTALGVIFCTAVVTTLLNWWLLAR
Ga0318574_101903031	3300031680	Soil	MAFIHGATIIWPTVHMPDEYRLTPPRLDPERIDLAEIKTDLEFAIDQISRLHRQLARTALGIIFSTAVITTLLGWCFL
Ga0318572_100973371	3300031681	Soil	MPDDDHRFSGPCPHPERIDLAAIKTDLEFAIDQISRLHRQLARTALGIIFSTAVITTL
Ga0306917_106302293	3300031719	Soil	MPDDDRRFSAPGPVPERIDLASIKTDLEFAIEQLARLHTQLAHTALGVIFCTAVVTTLLNWWFLTR
Ga0306917_115242401	3300031719	Soil	DPERIDLAAIKSDLEFAIDQISRLQTQLAQTALGIIFATAIVTTALGWWFLAR
Ga0318493_105780201	3300031723	Soil	TITWHTVHMPDDDHRFSGPRPHPEQIDLAAIKTDLEFAIDQILRLHTQLARTALGIIFSTAVITTLLGWCFLAR
Ga0318500_104159502	3300031724	Soil	MFWHTGAMPDDDRRFSVPSPAPERIDLATIKTDLEFAIEQLARLHTQLARTALGVIFCTAVVTT
Ga0318501_102611172	3300031736	Soil	MAFIHGATIIWPTVHMPDEYRLTPPRLDPERIDLAEIKTDLEFAIDQISRLHRQLARTALGIIFSTAVITTLLGWCFLAR
Ga0318494_102990101	3300031751	Soil	ATIIWHTGRMPDEYRLTPPRPDPERIDLAAIKTDLEFATGQLSRLHKQLARTALGIIFCTAAVTTLLDCWLLTR
Ga0318494_108901271	3300031751	Soil	MPDGDDRFSGPRPGPEQIDLAAIKTDLEFAIDQISRLHTQLARTALGIIFSTSVISTLLS
Ga0307475_110502122	3300031754	Hardwood Forest Soil	IIWHTVRMPDDDHHFSGPRPDPEQIDLAAIKTDLEFAIDQISRLHTQLARTALGIIFSTAVVTTALG
Ga0318537_101086942	3300031763	Soil	RMPDEYRLTPPRPDPERIDLAAIKTDLEFATGQLSRLHKQLARTALGIIFCTAAVTTLLDWWLLTR
Ga0318554_100821521	3300031765	Soil	MPDDDHRFSGPRPHPEQIDLAAIKTDLEFAIDQILRLHTQLARTALGIIFSTAVITT
Ga0318521_100064474	3300031770	Soil	MPDDDHRFSGPCPHPEQIDLAAIKTDLEFAIDQISRLHRQLARTALGILFSTAVITTLLGWCFLAR
Ga0318521_104811232	3300031770	Soil	MPDDDRRFSVPSPAPERIDLATIKTDLEFAIEQLARLHTQLAHTALGVIFCTAVVTTLLNWWLLAR
Ga0318546_110623861	3300031771	Soil	MPDDDRRFSVPSPAPERIDLASIKTDLEFAIDQLVRLHRQIARTALGIIFCTAVVTIC
Ga0318529_101686422	3300031792	Soil	SSTIRCRVLRVNYKATIIWHTVHMPDDDHRFSGPCPHPEQIDLAAIKTDLEFAIDQISRLHRQLARTALGIIFSTAVITTLLGWCFLAR
Ga0318548_104517411	3300031793	Soil	MPDEYRLTPPRPDPERIDLAAIKTDLEFATGQLSRLHKQLARTALGIIFCTAAVTAPDHRWFLHDISVIAARFR
Ga0318499_102190871	3300031832	Soil	MPDDDHRFSGPCPHPEQIDLAAIKTDLEFAIDQILRLHTQLARTALGIIFSTAVITTLLGWCFLAR
Ga0318512_101109784	3300031846	Soil	RATIIWHTVHMPDDDHRFSGPRPHPEQIDLAAIKTDLEFAIDQILRLHTQLARTALGIIFSTAVITTLLGWCFLAR
Ga0318512_106389752	3300031846	Soil	MFWHTGAMPDDDRRFSVPSPAPERIDLASIKADLEFAIAQLAWLRTQLARSTLGIIFCTAVVTTPFNWWFLTRVRGCS
Ga0318495_104029302	3300031860	Soil	MFWHTGAMPDDDRRFSVLSPAPERIDLASIKTDLEFAIDQLVRLHRQIARTALGIIFCTAVVTTFLNWWFLTR
Ga0318495_104416501	3300031860	Soil	MPDEYRLTPPRPGPERIDLAAIKTDFEFAIDQISRLHTQLARTALGIIFSTSVISTLLSW
Ga0306919_110636162	3300031879	Soil	MFWHTGAMPDDDRRFSVPSPAPERIDLATIKTDLEFAIEQLARLHTQLARTALGVIFCTAVVTTLLNWWLLAR
Ga0318544_102498352	3300031880	Soil	MPDDDRRFFVPSPASERIDLASIKTDLEFAIDQLVRLHRQLARTALGIIFCTAVVATLLNWFLTR
Ga0306925_116820222	3300031890	Soil	MSDDDHRFSEPGPDPEGINLMTIKAHIELPIDQISRLQTQLAQAALDIIFATALVTTALEWWFSVR
Ga0306925_120410231	3300031890	Soil	AVNHRSTMLWHSGAMPDDDRRFSVPSPAPERIDLASIKTDLEFANDQLARLHTQVARTALGVIFCTAVVTTLLNWWFLTR
Ga0318522_101112291	3300031894	Soil	MPDDDHRFSGPRPHPEQIDLAAIKTDLEFAIDQILRLHTQLARTALGIIFSTAVITTLLG
Ga0318520_100016389	3300031897	Soil	MPDDDHRFSGPRPHPEQIDLAAIKTDLEFAIDQILRLHTQLARTALGIIFSTAVITTLLGWCFL
Ga0306923_101048546	3300031910	Soil	PCPHPERIDLAAIKTDLEFAIDQISRLHRQLARTALGIIFSTAVITTLLGWCFLAR
Ga0306923_102594151	3300031910	Soil	MPDDDHRFSGPCPHPEQIDLAAIKTDLEFAIDQISRLHRQLARTALGIIFSTAVITTL
Ga0306923_108477641	3300031910	Soil	MFWHTGAMPDDDRRFSVPSPAPERIDLASIKADLEFAIAQLAWLRTQLARSTLGIIFCTAVVTTPFNWWFLTRVRGCSSS
Ga0306923_114542431	3300031910	Soil	MPDGDEHFSGPRPNPERIDLAAIKTDLEFAIDQIARLHTQLARTALGIVFSTSVISTLLSWWFLAR
Ga0306921_105412731	3300031912	Soil	MPDECRPTPPRPDPERIDLAAIKTDLEFAIDQISRLHRQLARTALGIIFSTAVITTLLGWCFLAR
Ga0306921_112469342	3300031912	Soil	MPDGDDRFSGPRPGPEQIDLAAIKTDLEFAIDQISRLHTQLARTALGIIFSTSVISTLLSCWFLTP
Ga0310913_109721312	3300031945	Soil	MLNHIRAYQAMPDDDRRFSVPSPAPERIDLALIKTDLEFAIDQLVRLDRQLARTALGIIFCTAVVTTLLNWWFLTR
Ga0310913_112498611	3300031945	Soil	MPDGDDRFSGPRPGPEQIDLAAIKTDLEFAIDQISRLHTQLARTALGIIFSTSV
Ga0310910_101756892	3300031946	Soil	MPDDDRRFSVPSPAPERIDLASIKTDLEFAIDQLVRLYRQIARTGLGIIFCTAVVTTLLNWWFLTR
Ga0310910_104711561	3300031946	Soil	MPDDDRRFSVPSPAPERIDLASIKADLEFAIAQLAWLRTQLARSTLGIIFCTAVVTTPFNWWFLTRVRGCSSS
Ga0310910_112588152	3300031946	Soil	MPDEYRLTPPRPGPERIDLAAIKTDFEFAIDQISRLHTQLARTALGIIFSTSVIST
Ga0310909_102212712	3300031947	Soil	MLWHSGAMPDDDRRFSVPSPAPERIDLASIKTDLEFANDQLARLHTQVARTALGVIFCTAVVTTLLNWWFLTR
Ga0310909_103803722	3300031947	Soil	MPDEYRLTPPRPDPERIDLAAIKTDLEFATGQLSRLHKQLARTALGIIFCTAAVTTLLDC
Ga0310909_108087811	3300031947	Soil	PDDDRRFSAPGPVPERIDLASIKTDLEFAIEQLARLHTQLARTALGVIFCTAVVTTLLNWWLLAR
Ga0310909_111246892	3300031947	Soil	MFWHTGAMPDDDRRFSAPGPVPERIDLASIKTDLEFAIEQLARLHTQLAHTALGVIFCTA
Ga0310909_116612423	3300031947	Soil	RMPDDDHRFSAPRPNPERIDLGAIKSDLEFVIDEISRLHTQLNQAALGIIFATAIVTTALVWWFTVR
Ga0306926_101661535	3300031954	Soil	MPDEYRLTPPRPGPERIDLAAIKTDLEFAIDQIARLHTQLARTALGIIFSTAIITTLLNCWFIAR
Ga0318531_100397296	3300031981	Soil	PHPERIDLAAIKTDLEFAIDQISRLHRQLARTALGIIFSTAVITTLLGWCFLAR
Ga0318531_103462821	3300031981	Soil	MFWHTGAMPDDDRRFSAPGPVPERIDLASIKTDLEFAIEQLVRLHTQLARTALGVIFCTAVVTTLLNWWLLAR
Ga0318531_103979091	3300031981	Soil	MPDDVHRFSVPRPDPERIDLAAIKADVEFSLEMMSRLHKQLSRMALGIIFRTAAVTILLNWWLLTP
Ga0306922_118176801	3300032001	Soil	LTPPRPDPERIDLAAIKTDLEFAIGQLSRLHKQLARTALGIIFCTATVTTFLNWWLLAH
Ga0310911_100057431	3300032035	Soil	RCRVLRVNYKATIIWHTVHMPDDDHRFSGPCPHPERIDLAAIKTDLEFAIDQISRLHRQLARTALGIIFSTAVITTLLGWCFLAR
Ga0310911_105572583	3300032035	Soil	RERRDEPFNRRSTMFWHTEAMPDDDHRFSVPSPVPERIDLASIKTDLEFAIEQLVRLHTQLARTALGIIFCTAVVTTLLNWWFLTR
Ga0318533_106508561	3300032059	Soil	MPDDDRRFSVPSPAPERIDLASIKTDLEFAIDQLVRLHRQIARTALGIIFCTAVVTICT
Ga0306924_118924921	3300032076	Soil	MPDDDRRFFVPSPASERIDLASIKTDLEFAMDQLVRLYRQLARTALGIIFSTAVVTTLLNWWFLTR
Ga0306924_123343492	3300032076	Soil	RMPDDDRRFSVPSPAPERIDLATIKTDLEFAIEQLARLHTQLARTALGVIFCTAVVTTLLNWWLLAR
Ga0318518_104369231	3300032090	Soil	MFWHTEAMPDDDHRFSVPSPVPERIDLASIKTDLEFAIDQLVRLHRQLARTALGIIFCTAVITMLLNWWFLTR
Ga0318540_104543942	3300032094	Soil	MPDDDRHFSVPGPTPERIDLASIKTDLEFAIDQLVRLHRQLARTALGIIFCTAVVTTLLNWWFLTR
Ga0306920_1003642063	3300032261	Soil	VAMPDYDRHFSVPGPTPERIDLASIKTDLEFAIDQLVRLHRQLARTALGIIFCTAVVATLLNWFLTR
Ga0306920_1010375671	3300032261	Soil	MPDDDRRFSAPHPAPERIDLAAIKADLEFTIGQLSRLHKQLARTALGIIFCTATATTFLNWWLLSR
Ga0306920_1011454581	3300032261	Soil	YRCSTIFGHTEAMPDDERRFSVPSPAPERIDLASIKTDLEFAIDQLVRLHRQLARTALGIIFCTAVVTTFLNWWFLTR
Ga0306920_1022779641	3300032261	Soil	MPDDERHFSVPSPAPERIDLAALKTDVEFAIGQLSRLHKQLARTALGIIFSTATATTFLNWWLLSH
Ga0306920_1025428062	3300032261	Soil	MFWHTGAMPDDDRRFSAPGPVPERIDLASIKTDLEFAIEQLARLHTQLAHTALGVIFCTAVVTTLLNWWFLTR
Ga0306920_1033852131	3300032261	Soil	MPDDDRRFSVPSPAPERIDLASIKTDLEFAIDQLVRLHRQIARTALGIIFCTAVVTICTAATSAPANAEG
Ga0306920_1038458821	3300032261	Soil	MPDDERRFFSPRPDPERIDLAALKTDVEFAIEQLARLHKQLARTAVVTTLLNWWFLTR
Ga0310914_104223572	3300033289	Soil	MFWHTGAMPDDDRRFSVPSPAPERIDLASIKADLEFAIAQLAWLRTQLARSTLGIIFCTAVVTTLLNWWLLAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters