Metagenome / Metatranscriptome Family F102201

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102201
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	46 residues
Representative Sequence	LNPVTTEAKFDKNLIPSSVYKTIIRLNKEGFSALIVGGFLRDCLANI
Number of Associated Samples	46
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.96 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	75.25 %
Associated GOLD sequencing projects	36
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (79.208 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (99.010 % of family members)
Environment Ontology (ENVO)	Unclassified (99.010 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (100.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1Ga0182057_10030371 2Ga0182049_12809161 3Ga0182047_12001801 4Ga0182055_11589601 5Ga0182043_13031571 6Ga0182062_10704671 7Ga0182084_12192102 8Ga0182084_15789521 9Ga0181565_100441385 10Ga0181565_100483531 11Ga0181565_100656604 12Ga0181565_101164384 13Ga0181565_101712541 14Ga0181565_103141363 15Ga0181565_103688883 16Ga0181584_101005071 17Ga0181577_103689741 18Ga0181577_105984502 19Ga0181583_101934731 20Ga0181580_100933011 21Ga0181580_104219623 22Ga0181580_109986521 23Ga0181571_100842954 24Ga0181571_105452142 25Ga0181581_100490051 26Ga0181581_102825763 27Ga0181581_103880481 28Ga0181581_104431941 29Ga0181590_102730711 30Ga0181590_104900291 31Ga0181585_100547145 32Ga0181585_100985751 33Ga0181576_100303536 34Ga0181576_100926174 35Ga0181576_101115631 36Ga0181576_101782883 37Ga0181576_102762781 38Ga0181569_100375366 39Ga0181569_100994261 40Ga0181569_101650203 41Ga0181569_102669451 42Ga0181572_100759491 43Ga0181572_100810591 44Ga0181572_101394351 45Ga0181567_100451011 46Ga0181567_100725884 47Ga0181567_101783421 48Ga0181567_102162043 49Ga0181567_106082983 50Ga0181592_101365151 51Ga0181592_106179961 52Ga0181591_100875341 53Ga0181591_102971983 54Ga0181566_101450804 55Ga0181566_102304201 56Ga0181566_105132083 57Ga0181568_100587261 58Ga0181568_103378721 59Ga0182066_10572001 60Ga0182066_10579661 61Ga0182066_14567231 62Ga0182066_15403262 63Ga0182061_11244323 64Ga0182061_12406901 65Ga0182059_10967741 66Ga0182059_13933873 67Ga0182059_15836002 68Ga0182059_16813581 69Ga0182073_12396202 70Ga0182073_15300313 71Ga0182081_13276002 72Ga0182081_14373971 73Ga0182068_12465832 74Ga0182068_16893951 75Ga0182077_16642272 76Ga0182077_16645072 77Ga0182058_12274971 78Ga0181570_103339332 79Ga0213858_102409903 80Ga0255770_100302741 81Ga0255754_100522081 82Ga0255764_101221383 83Ga0255764_101521381 84Ga0255764_103930202 85Ga0255778_102283471 86Ga0255778_103500672 87Ga0255743_100214636 88Ga0255760_100597161 89Ga0255760_104335501 90Ga0255762_100420721 91Ga0255762_100680104 92Ga0255762_100806204 93Ga0255762_102475893 94Ga0255762_104467571 95Ga0255762_104623442 96Ga0255761_104907212 97Ga0255766_101337421 98Ga0255766_101958683 99Ga0255777_106400641 100Ga0255768_100603204 101Ga0232122_11294402
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1Ga0182057_10030371 2Ga0182049_12809161 3Ga0182055_11589601 4Ga0181565_100656604 5Ga0181565_101712541 6Ga0181577_103689741 7Ga0181571_105452142 8Ga0181576_102762781 9Ga0182061_11244323 10Ga0255768_100603204
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.67% β-sheet: 0.00% Coil/Unstructured: 65.33%
Feature Viewer
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF14489	QueF	68.32
PF03739	LptF_LptG	16.83
PF00006	ATP-synt_ab	7.92
PF07498	Rho_N	3.96
PF00085	Thioredoxin	2.97

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0795	Lipopolysaccharide export LptBFGC system, permease protein LptF	Cell wall/membrane/envelope biogenesis [M]	16.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.21 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.21 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.21 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.21 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	62.38 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	36.63 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Thioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	36.63 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → environmental samples	33.66 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.79 %
uncultured Candidatus Thioglobus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → environmental samples → uncultured Candidatus Thioglobus sp.	33.66 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300016732\|Ga0182057_1003037	Not Available	522	Open in IMG/M
3300016736\|Ga0182049_1280916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → environmental samples → uncultured Candidatus Thioglobus sp.	559	Open in IMG/M
3300016737\|Ga0182047_1200180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → environmental samples → uncultured Candidatus Thioglobus sp.	641	Open in IMG/M
3300016746\|Ga0182055_1158960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → environmental samples → uncultured Candidatus Thioglobus sp.	572	Open in IMG/M
3300016748\|Ga0182043_1303157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → environmental samples → uncultured Candidatus Thioglobus sp.	568	Open in IMG/M
3300016751\|Ga0182062_1070467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → environmental samples → uncultured Candidatus Thioglobus sp.	689	Open in IMG/M
3300016762\|Ga0182084_1219210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → environmental samples → uncultured Candidatus Thioglobus sp.	619	Open in IMG/M
3300016762\|Ga0182084_1578952	Not Available	668	Open in IMG/M
3300017818\|Ga0181565_10044138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3238	Open in IMG/M
3300017818\|Ga0181565_10048353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3080	Open in IMG/M

Showing 1 to 10 of 101 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	0.99%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	99.01%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	99.01%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	99.01%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.99%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300016732	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101403AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016736	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011508BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016737	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011506CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016746	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101401AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016748	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011502CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016751	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101408BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016762	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M

Showing 1 to 10 of 46 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0182057_10030371	3300016732	Salt Marsh	LNPDTTEAKFDKNIIPDNVCKTIIRLNNKGFSVFIVGGFL
Ga0182049_12809161	3300016736	Salt Marsh	LNPVTTEAKFDKKLIPSSVYKTINRLHKEGFSALIVG
Ga0182047_12001801	3300016737	Salt Marsh	LNPVTTEAKFDKKLIPSSVYKTINRLHKEGFSALIVGGFLRDCLANIK
Ga0182055_11589601	3300016746	Salt Marsh	LSPVTTEAKFDKDLIPYSVCKTIIRLNKEGFSALIVGGFPRDCLANIKAKDYDIV
Ga0182043_13031571	3300016748	Salt Marsh	LNPVTTEAKFDKKLIPSSVYKTINRLHKEGFSALIVGGFLRDCL
Ga0182062_10704671	3300016751	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLHKEGFSALIVGGFLRDCL
Ga0182084_12192102	3300016762	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLHKEGFSALIVGGFL
Ga0182084_15789521	3300016762	Salt Marsh	LNLVTTEATFDRDLIPSSVCKTIIRLNKEGFSALIVGGFPRDCLANIKAKDYDI
Ga0181565_100441385	3300017818	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTIIRLNKEGFSALIVGGFLRDCLANIKAKDY
Ga0181565_100483531	3300017818	Salt Marsh	LNPVTAEATFDKNLIPPSVSNTIIRLNKEGFSALIVGGFPRDCLANIKAKDYD
Ga0181565_100656604	3300017818	Salt Marsh	LNPVTTEAKFDKNLIPYSDYKTIIRLNKEGFSALIVGGFLRDCLAN
Ga0181565_101164384	3300017818	Salt Marsh	LILLNPVTTEAKFDKEIIPSSVCNTIKRLNKEGFTALIVGGFPRDCLANINAKDYDLV
Ga0181565_101712541	3300017818	Salt Marsh	LTHLKPVTTEAKFDKKIIPSSVCRTIKQLNKEGFS
Ga0181565_103141363	3300017818	Salt Marsh	LNPVTTEAKFDKNIIPFSVYKTITRLNKEGFSALIVGGFLRDCLANI
Ga0181565_103688883	3300017818	Salt Marsh	LNPVTTEAKFDKNLIPSIVYKTINRLNKEGFSALIVGGFLR
Ga0181584_101005071	3300017949	Salt Marsh	LNPVTTEAKFDKNIIPSSVSKTIIRLNKEGFSALIVGGFLRDCLANIKAKDYDI
Ga0181577_103689741	3300017951	Salt Marsh	LNPVTTEAKFNRCIIPSNVCKIIRRLNLEGFSAFIVGGFLRDCLSGAEAKDYDL
Ga0181577_105984502	3300017951	Salt Marsh	LNPVTTEAKFDKNLIPSSVCKTIIRLNKEGFSALIVGGFLRDCLADLKAK
Ga0181583_101934731	3300017952	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLHKEGFSALIVGGFLRDCLAN
Ga0181580_100933011	3300017956	Salt Marsh	LNLVTTVATFDKNLIPSSVCKTINRLNKEGFSALIVGGFPRDCLADIKAKDYDI
Ga0181580_104219623	3300017956	Salt Marsh	LNPVTTDAKFDKNLIPSSVYKTIIRLNKEGFSALIVGGFLRDCLANIK
Ga0181580_109986521	3300017956	Salt Marsh	LNPVTTVATFDKNVIPSSVYKTIIRLNKEGFSALIVGG
Ga0181571_100842954	3300017957	Salt Marsh	LILLNPVTTEAKFDKKIIPSSVCKTIKRLNKEGFSALIVGGFLRDCLANIKAKDY
Ga0181571_105452142	3300017957	Salt Marsh	LSPVTTEAKFDRNTIPSIVSETIKRLNKEGFSALIVGGFL
Ga0181581_100490051	3300017962	Salt Marsh	LSPVTTEAKFDKDLIPYSVCKTIIRLNKEGFSALIVGGFPRD
Ga0181581_102825763	3300017962	Salt Marsh	LNLVTTQATFDKNLIPSSVCKTIIRLNKEGFSALIVGGFPRDCLANIKAKDYDIV
Ga0181581_103880481	3300017962	Salt Marsh	LSPVTSKAKFDKNIIPFQVCKTVERLNNKGFSALIVGGFLRDCLANIKAKDYDIVT
Ga0181581_104431941	3300017962	Salt Marsh	LNPVTTEAKFDKNIIPSSVFKTIYRLNKEGFSALIVGGFLRDCLANIK
Ga0181590_102730711	3300017967	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLHKEGFSALIV
Ga0181590_104900291	3300017967	Salt Marsh	LNPVTTEAKFDKNLIPSIVYKTINRLNKEGFSALIVGGFLRDCLANIKAKD
Ga0181585_100547145	3300017969	Salt Marsh	LSPVTTEAKFDKDLIPYSVCKTIIRLNKEGFSALIVGGFLRDCLANIKAKDYDIVT
Ga0181585_100985751	3300017969	Salt Marsh	LNPVTTEAKFDKNLIPSIVYKTINRLNKEGFSALIVGGFLRD
Ga0181576_100303536	3300017985	Salt Marsh	LNPVITEAKFDKNLIPSSVYKTINRLNKEGFSALIVGGFLRDCL
Ga0181576_100926174	3300017985	Salt Marsh	LNPVTTEAKFDKNLIPSSVSKTIIRLNKEGFSALIVGGFLRDCLANIKAKD
Ga0181576_101115631	3300017985	Salt Marsh	LNPVTIEAKFDKNLIPSSVCKTIIRLNKEGFSALIVGG
Ga0181576_101782883	3300017985	Salt Marsh	LNPVTTEAKFDKNLIPSSVCKTIIRLNEKGFTALIVGGFLR
Ga0181576_102762781	3300017985	Salt Marsh	LIRLKPVTTEAKFDKNTIPYEVCKTINRLNKEGFSAFLVGGFLRDCL
Ga0181569_100375366	3300017986	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLHKEGFSALIVGGF
Ga0181569_100994261	3300017986	Salt Marsh	LSPVTTEAKFDKDLIPYSVCKTIIRLNKEGFSALIVGGFPRDCLANIKAKDYDIVT
Ga0181569_101650203	3300017986	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTIYRLNKEGFSALIVGGFLRDCLA
Ga0181569_102669451	3300017986	Salt Marsh	LNPVTTEAKFDKNIIPFSVYKTITRLNKEGFSALIVGGFLRDCLANIKAKD
Ga0181572_100759491	3300018049	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTITRLNKEGFSALIVGGFLRDCLANIKAKDY
Ga0181572_100810591	3300018049	Salt Marsh	LSPVTTVAKFDKDIIPSSVCKTIIRLNKEGFSALIVGGFPRDCLANIKAKDYDIV
Ga0181572_101394351	3300018049	Salt Marsh	LNPVITEAKFDKNLIPSSVYKTINRLNKEGFSALIV
Ga0181567_100451011	3300018418	Salt Marsh	LSPVTTEAKFDKDLIPYSVCKTIIRLNKEGFSALIVGGFLRDCLANIKAKDYDI
Ga0181567_100725884	3300018418	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTIIRLNKEGFSALIVGGFLR
Ga0181567_101783421	3300018418	Salt Marsh	LNPVTTEAKFDKNIIPSSVFKTIYRLNKEGFSALIVGGFLRDCLANIKAKDYDIV
Ga0181567_102162043	3300018418	Salt Marsh	LNPVTTEAKFDKNIIPFCVYKTITRLNKEGFSALIVGGFLRDCLANIKA
Ga0181567_106082983	3300018418	Salt Marsh	LNPGTTEAKFDKNLIPLRVCKTIIRLNKEGFSALIVGGFPRD
Ga0181592_101365151	3300018421	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLHKEGFSALIVGG
Ga0181592_106179961	3300018421	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLNKEGFSALIVGGF
Ga0181591_100875341	3300018424	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLNKEGFSALIVGGFLRDCLANIKAK
Ga0181591_102971983	3300018424	Salt Marsh	LNPVTIEAKFDKNLIPSSVCKTIIRLNKEGFSALIVGGFLR
Ga0181566_101450804	3300018426	Salt Marsh	LNPVTTEAKFDKNIIPSSVFKTIYRLNKEGFSALIVGG
Ga0181566_102304201	3300018426	Salt Marsh	MLLNPVTTEAKFDKKLIPSNVYKTIIRLNKEGFSAFIVGG
Ga0181566_105132083	3300018426	Salt Marsh	LNPVTTEAKFDKNIIPFSVYKTITRLNKEGFSALIVGGFLRDCLANIKAKDY
Ga0181568_100587261	3300018428	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLHKEGFSALIVGGFLRDC
Ga0181568_103378721	3300018428	Salt Marsh	LNPVTTEAKFDKNIIPSSVSKTIIRLNKEGFSALIVGGFLRDC
Ga0182066_10572001	3300019262	Salt Marsh	LNPVTTEAKFDKNLIPSNVYKTINRLNKEGFSALIVGGFLRD
Ga0182066_10579661	3300019262	Salt Marsh	LNPVTTEAKFDKDLIPSSVYKTITRLNKEGFSALIVGGFLRD
Ga0182066_14567231	3300019262	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLNKEGFSALIVGGFLRDCLANIK
Ga0182066_15403262	3300019262	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLYKEGFSALIVGGFLRDCL
Ga0182061_11244323	3300019266	Salt Marsh	LNPVTIEAKFDKSIIPSIVINTLKRLNKEGFSALIV
Ga0182061_12406901	3300019266	Salt Marsh	LNSVTTEAKFDKGIIPSSVRNTIKLLNKKGFSALIV
Ga0182059_10967741	3300019272	Salt Marsh	LNPVTTEAKFDKNLIPFSVYKTITRLNKEGFSALIVGGFLRDC
Ga0182059_13933873	3300019272	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTIIRLNKEGFSALIVGGFLRDCLANI
Ga0182059_15836002	3300019272	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTIIRLNKEGFSALIVGGFL
Ga0182059_16813581	3300019272	Salt Marsh	LNPVTIEAKFDKNLIPSSVCKTIIRLNKEGFSALIVGGFLRDCLANIKA
Ga0182073_12396202	3300019274	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLHKEGFSALIVGGFLRDCLA
Ga0182073_15300313	3300019274	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLNKEGFSALIVGGFLR
Ga0182081_13276002	3300019277	Salt Marsh	LNPVTSEAKFDKNIIPFSVYKTITRLNKEGFSALIVGGFLRDCLANI
Ga0182081_14373971	3300019277	Salt Marsh	LSPVTTVAKFDKEIIPSSVCKTIIRLNKEGFSALIVGGFLRDCLANIKAKDYDI
Ga0182068_12465832	3300019280	Salt Marsh	LNPVTIEAQFDKNLIPSSVYKTINRLNKEGFSALIVGGFL
Ga0182068_16893951	3300019280	Salt Marsh	LILLNPVTTEAKFDKKIIPSSVCKTIKRLNKEGFSALIVGGFLRDCLA
Ga0182077_16642272	3300019281	Salt Marsh	LSPVTTVAKFDKEIIPSSVCKTIIRLNKEGFSALIVGGFLRDCLANIKAKDYDIV
Ga0182077_16645072	3300019281	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLHKEGFSALIVGGFLRDCLANI
Ga0182058_12274971	3300019283	Salt Marsh	LNPVTTEAKFDRNLIPSSVCKTIIRLNKEGFSTFIVGGFLRDCLANIKAKDYD
Ga0181570_103339332	3300020207	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTIIRLNKEGFSALIVGGFLRDC
Ga0213858_102409903	3300021356	Seawater	LNPVTTEAKFDKNLIPSIVYKTINRLNKEGFSALIVGGFL
Ga0255770_100302741	3300022937	Salt Marsh	LSPVTTEAKFDKNIIPSNVCKTIKRLNKEGFSALIVGGFLRDCLAGIKVKD
Ga0255754_100522081	3300022939	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLNKEGFSALIVGG
Ga0255764_101221383	3300023081	Salt Marsh	LNPVTIEAKFDKNLIPSSVCKTIIRLNKEGFSALIVGGFLRDSLANI
Ga0255764_101521381	3300023081	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLNKEGFSALIVG
Ga0255764_103930202	3300023081	Salt Marsh	LNPVTTEAKFDKNLIPSSVCKTIIRLNNEGFSAFIVGGFLRDCLVDTKAKD
Ga0255778_102283471	3300023084	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLHKEGFSALIVG
Ga0255778_103500672	3300023084	Salt Marsh	LNIVTTEATFDKNLIPSSVCKTIIRLNREGFSALIVGGFPRDCLANIKAKDY
Ga0255743_100214636	3300023110	Salt Marsh	LNPVTTEAKFNRCIIPSNVCKIIRRLNLEGFSAFIVGGFLRDCLSGAEAKDYDLVTN
Ga0255760_100597161	3300023115	Salt Marsh	LNPVTTEAKFDKNLIPSIVYKTINRLNKEGFSALIVGGFLRDCLANIK
Ga0255760_104335501	3300023115	Salt Marsh	LNPDTTEAKFDKNIIPDNVCKTIIRLNNKGFSVFIVGGFLRDCLANIKAKD
Ga0255762_100420721	3300023119	Salt Marsh	LNPVTTEAKFNRCIIPSNVCKIIRRLHLEGFSAFIVGGFLRDCLSGAEAKDYDLV
Ga0255762_100680104	3300023119	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLNKEGFSALIVGGFLRD
Ga0255762_100806204	3300023119	Salt Marsh	LNPVTTEAKFDKNLIPSNVYKTINRLNKEGFSALIVGGFLRDCLANIK
Ga0255762_102475893	3300023119	Salt Marsh	LNPVITEAKFDKKLIPSSVYKTINRLNKKGFSALIVGGFLRDCLANIKAK
Ga0255762_104467571	3300023119	Salt Marsh	LNLVTTEAKFDKNLIPSAVCKTIIRLNKEGFSALIVGGFPRDCLANIKAKDYDIV
Ga0255762_104623442	3300023119	Salt Marsh	LNPDTTEAKFDKNIIPDNVCKTIIRLNNKGFSVFIVGGFLRDCLANIKAKDYDLVTN
Ga0255761_104907212	3300023170	Salt Marsh	LNPVTTEAKFDKNIIPSSVYKTINRLYKEGFSALIV
Ga0255766_101337421	3300023172	Salt Marsh	LSPVTTEAKFDKDLIPYSVCKTIIRLNKEGFSALIVGGFPRDCL
Ga0255766_101958683	3300023172	Salt Marsh	LNPVTTEAKFDKNIIPFSVYKTITRLNKEGFSALIVGGFLRDCLA
Ga0255777_106400641	3300023175	Salt Marsh	MLLNPVTTEAKFDKKLIPSNVYKTIIRLNKEGFSA
Ga0255768_100603204	3300023180	Salt Marsh	LNPVTIQAKFDKNLIPSSVRKTIIRLNEKGFSALLVGGF
Ga0232122_11294402	3300023709	Salt Marsh	LNPVTTEAKFDKNLIPSSVYKTINRLYKKGFSALIVGGFLRDSLANIK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters