NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F102162

Metagenome / Metatranscriptome Family F102162

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F102162
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 71 residues
Representative Sequence MRFYMLPAEQGKTTCINFDHVAYIQLGAQTIELHFIGVEAPMVITKSPTTLALVAKGMDLSDSSKDLVSTL
Number of Associated Samples 64
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction Yes
3D model pTM-score0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.020 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog
(32.353 % of family members)
Environment Ontology (ENVO) Unclassified
(47.059 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.980 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 19.19%    β-sheet: 27.27%    Coil/Unstructured: 53.54%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF07876Dabb 32.35
PF13472Lipase_GDSL_2 9.80
PF00903Glyoxalase 3.92
PF16363GDP_Man_Dehyd 2.94
PF13426PAS_9 1.96
PF13525YfiO 1.96
PF13450NAD_binding_8 1.96
PF01370Epimerase 1.96
PF02381MraZ 0.98
PF00326Peptidase_S9 0.98
PF02597ThiS 0.98
PF00657Lipase_GDSL 0.98
PF00512HisKA 0.98
PF01408GFO_IDH_MocA 0.98
PF03567Sulfotransfer_2 0.98
PF04191PEMT 0.98
PF14849YidC_periplas 0.98
PF13432TPR_16 0.98
PF00989PAS 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG1977Molybdopterin synthase sulfur carrier subunit MoaDCoenzyme transport and metabolism [H] 0.98
COG2001MraZ, DNA-binding transcriptional regulator and inhibitor of RsmH methyltransferase activityTranslation, ribosomal structure and biogenesis [J] 0.98
COG2104Sulfur carrier protein ThiS (thiamine biosynthesis)Coenzyme transport and metabolism [H] 0.98


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.02 %
All OrganismsrootAll Organisms0.98 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300029911|Ga0311361_10021471All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia11845Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog32.35%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa17.65%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog10.78%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated5.88%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.92%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa3.92%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost3.92%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.94%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater1.96%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.96%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.96%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.96%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.98%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.98%
Thawing PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost0.98%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.98%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.98%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.98%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300009500Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009651Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063EnvironmentalOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014491Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014496Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaGEnvironmentalOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300019268Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300020061Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027648Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027803Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3SEnvironmentalOpen in IMG/M
3300027860Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)Host-AssociatedOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028036Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2Host-AssociatedOpen in IMG/M
3300028745Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3EnvironmentalOpen in IMG/M
3300028748Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2EnvironmentalOpen in IMG/M
3300028762Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3EnvironmentalOpen in IMG/M
3300028779Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2EnvironmentalOpen in IMG/M
3300028866Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2EnvironmentalOpen in IMG/M
3300028909Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1EnvironmentalOpen in IMG/M
3300029908II_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029910III_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300029911III_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029913III_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029939I_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300029952II_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029953II_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030011Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3EnvironmentalOpen in IMG/M
3300030020II_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030506Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1EnvironmentalOpen in IMG/M
3300030507Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030688II_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300032605Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13EnvironmentalOpen in IMG/M
3300032722Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18027EnvironmentalOpen in IMG/M
3300033818Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-MEnvironmentalOpen in IMG/M
3300033888Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M
3300034199Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_100242802170459010Grass SoilMRFYILPTEEGRTTAINFDHVAHVTVAGPTIEIHFAGVELPMVVAKTPTTLSTISKGMDVSDSTKEQIANL
Ga0062389_10113103623300004092Bog Forest SoilMRFYLLPAEEGITTCINFEHVSYIRVGPKTIELYFEGVVAPMVVTKSPSTLSLVAKGMDLSDSSKDLVNTL*
Ga0062389_10378979913300004092Bog Forest SoilMRFYILPTEQGQTTCINFDHVAFIRLGPKTIELHFIGVEAPMVITKSPTTLALVAKGMDLSDASKDLVSTL*
Ga0062388_10257902423300004635Bog Forest SoilMRFYLLPAEGGITTCINFEHVSYIRVGPKTIELFFEGVEAPMVVTKSPSTLSLVAKGMDLSDASKDLVNTL*
Ga0068863_10225871123300005841Switchgrass RhizosphereMRFYLLPIDQGETTCINFDHVAYIKVQPKTIELHFIGVEQPMSVAKTATTLALVAKGMDLSDASKDLVATL*
Ga0116229_1000342733300009500Host-AssociatedMVSSFVHAAQMRFYMLPAEQGKTTCINFEHVAYIQLGAQTIELHFIGVEAPMVITKSPSTLSLVAKGMDLSEASKDLVNSL*
Ga0116229_1002993243300009500Host-AssociatedMRFYMLPAEQGVTTCINFEHVAYIHLGAKTIELHFIGVEAPMVITKSPSTLSLVAKGMDLSDSSKDLVASL*
Ga0105859_117360023300009651Permafrost SoilPGQPLGSCQGVVLAAFFGMRFYILPIEQGTTTCINFDHVAYIRLGAQTIELHFIGVEAPMVITKSATTLALVAKGMDLSDSSKDLVNAL*
Ga0116227_1017897913300009709Host-AssociatedMRFYLLPAEQGTTTCINFDHVAFIRLGAKTIELHFIGVEAPMVVAKTATTLSLVAKGMDLSDSSKDLVSTL*
Ga0116227_1071225113300009709Host-AssociatedLFGCQRTCLGAFFEMRFYLLPKEQDQTVCINFDHVAFIRVGKETIEIHFIGVEAPMVIPKTPTTLSLVAKGMDLSDNSKDLVNAL*
Ga0181534_1011381613300014168BogMRFYMLPTEQGKTTCINFEHVAYIHLGAKTIELHFIGVEAPMVITKTATTLALVAKGMDLSDTSKDLVNTL*
Ga0181531_1076583513300014169BogMRFYMLPTEQGQTTCINFDHVAFIRLGPQTIELHFIGVEAPMVVTKSPTTLALVAKGMDLSDTSKDLVSTL*
Ga0181537_10002042183300014201BogKTTCINFDHVAYIQLGAQTIEVHFIGVEAPMVITKTPTTLALVAKGMDLSDSSKDMVSTL
Ga0181537_1007322543300014201BogMRFYILPTDEGKTTCINFDHVAIVVITAATIELHFAGVEAPMVIKKTATTLSMIGKGMDISDTSKDMVSNL*
Ga0182018_1005909833300014489PalsaMRFYILPTDEGKTTCINFDHVAIVVITGPSIELHFAGVEAPMVIKKTPTTLSMIGKGMDISDTSKDMVSNL*
Ga0182018_1033923523300014489PalsaMRFYILPTDEGKTTCINFDHVAIVVITAASIELHFAGVEAPMVIKKTPTTLSMIGKGMDISDTSKDMVSNL*
Ga0182014_1050729023300014491BogMRFYMLPTEQGETICINFDHVAYIRLDAKSIELHFIGVEKPMVLAKSPATLALVAKGMDLSDSSKDLVGTL*
Ga0182013_1047134023300014492BogMRFYILPTEQGKTTCINFDHVAYIHLGAQTIELHFIGVETPMVITKSPTTLALVAKGMDLSDASKDMVGTL*
Ga0182016_1068675723300014493BogMRFYMLPAEQGKTTCINFDHVAYIHLGPQTIELHFIGVEAPMVITKSAVTLAMVAKGMDLSDSSKDLVNAL*
Ga0182015_1038099833300014495PalsaMRFYILPTEQGQTTCINFDHVAFIRLGPQTIELHFIGVEAPMVVTKSPATLALVAKGMDLSDASKDLVITL*
Ga0182015_1051218713300014495PalsaMRFYMLPAEQGKTTCINFDHVAYIHLDAKTIELHFIGVEAPMVITKSATTLSLVAKGMDLSDSSKDLVSSL*
Ga0182011_1047223823300014496FenMRFYILPTEQGETTCINFEHVAYIRLGAKTIELHFMGVEAPMVITKSATTLALVAKGMDLSDSSRDLVSTL*
Ga0182012_1077862713300014499BogYILPAEQGTTTCINFDHVAYILLGVKTIELHFIGVEAPMVITKSATTLALVAKGMDLSDTSKDLVSTL*
Ga0182024_10006285223300014501PermafrostMRFFLLPADQGKTTCINFDHVAYIQLGAQTIEVHFIGVEAPMVITKTPTTLALVAKGMDLSDSSKDMVSTL*
Ga0182024_1081652923300014501PermafrostMRFYILPTEQGNTTCINFDHVAYIHLGTQSIALHFIGVEAPMLITKSAVTLAMVAKGMDLSDSSKDLVNAL*
Ga0182024_1114617213300014501PermafrostQGITTCINFDHVAYIHLGAATIELHFIGVEAPMVIKKSATTLALVAKGMDLSDASKDLVGTL*
Ga0182030_1003228633300014838BogMRFYMLPTEQGKTTCINFDHVAYIHLSAQTIELHFIGVEEPMVITKSAATLSLVAKGMDLSDSSKDLVNSL*
Ga0182030_1007095233300014838BogMRFYILPTDQGQTTCINFDHVAYIHLGPKTIALHFIGVEAPMVITKSAATLALVAKGMDLSDSSKDLVGAL*
Ga0182030_1028470523300014838BogMRFYMLPAEQGKTTCINFEHVAYIQLGAQTIELHFIGVEAPMVITKSASTLSLVAKGMDLSDASKDLVNSL*
Ga0182030_1059133923300014838BogMRFYILPTEQGETTCINFEHVAYIRLGAKTIELHFMGVEAPMVITKSATTLALVAKGMDLSDSSKDMVSTL*
Ga0182030_1065202423300014838BogMRFYLLPTEQGKTTCVNFDHVAYIDVCLKTIEMHFIGVEAPMVVTKSPTTLALVAKGMDLSDSGKDLINTL*
Ga0182030_1129726323300014838BogADQGKTTCINFDHVAYIHLGAQTIELHFIGVEEPMVITKSAATLSLVAKGMDLSDSSKDLVNSL*
Ga0182030_1147484713300014838BogMRFYILPAEQGETTCINFDHVAYIRLGAKTIELHFMGVEAPMVITKSPATLALVAKGMDLSDSSSDLVGTL*
Ga0181514_126126723300019268PeatlandMRFYMLPTEQGKTTCINFEHVAYIHLGAKTIELHFIGVEAPMVITKTATTLALVAKGMDLSDTSKDLVNTL
Ga0182025_129283153300019786PermafrostMRFYILPTEEGQTNCINFDHVAFIRLGAKTIELHFIGVEAPMVVPKSATTLALVAKGMDLSDASKDLVGTL
Ga0193753_1018463033300020034SoilMRFYLMPTEQGKTTCINFDHVAYIHVGAQAIELHFIGVEAPMVISKSPTTLAMISKGMDLSDSSKDLVSAL
Ga0193716_103073933300020061SoilMRFYMLPAEAGQTTCINFDHVAYIHLGAKTIALHFIGVEAPMVVTKTPTTLALVAKGMDLSDASKDLVSTL
Ga0207641_1254274713300026088Switchgrass RhizosphereMRFYLLPIDQGETTCINFDHVAYIKVQPKTIELHFIGVEQPMSVAKTATTLALVAKGMDLSDASKDLVATL
Ga0209420_111853713300027648Forest SoilMRFYMLPTDQGKTTCINFEHVAYIHLGAKTIELHFIGVEAPMVVTKSPTTLALVAKGMDLSDASKDLVNTL
Ga0209910_1003087233300027803Thawing PermafrostNVASLRHVLGMRFYILPTEQGKTTCINFDHVAYIQLGAQTIELHFIGVEAPMVITKSPATLSMVAKGMDLSDTSKDLVNAL
Ga0209611_1000335243300027860Host-AssociatedMVSSFVHAAQMRFYMLPAEQGKTTCINFEHVAYIQLGAQTIELHFIGVEAPMVITKSPSTLSLVAKGMDLSEASKDLVNSL
Ga0209611_1002786443300027860Host-AssociatedMRFYMLPAEQGVTTCINFEHVAYIHLGAKTIELHFIGVEAPMVITKSPSTLSLVAKGMDLSDSSKDLVASL
Ga0209006_1124913813300027908Forest SoilMRFYLLPTEQGQTTCINFDHVAFIRLGSQTIELHFIGVEAPMVITKSPTTLALVAKGMDLSDASKDLVSTL
Ga0265355_102478823300028036RhizosphereMRFYMLPTEQGQTTCINFDHVAFIRLGPQTIELHFIGVEAPMVVTKSATTLALVAKGMDLSDSSKDLLSTL
Ga0302267_1003838833300028745BogMRFYLLPTEQGKTTCVNFDHVAYIDVCLKTIEMHFIGVEAPMVVTKSPTTLALVAKGMDLSDSGKDLINTL
Ga0302267_1018243713300028745BogGETTCINFDHVAYIRLGAKTIELHFMGVEAPMVITKSATTLALVAKGMDLSDSSRDLVGT
Ga0302156_1038923013300028748BogMRFYMLPTEQGQTTCINFEHVAYIHLGAKTIALHFIGVEAPMVITKTATTLALVAKGMDLSDSSKDLVSTL
Ga0302202_1026940513300028762BogMRFYLLPIDQGTTTCINFEHVAYIQLGPQTIELHFIGVEAPMVIKKTATTLSLVAKGMDLSDTSKDLV
Ga0302266_1005090133300028779BogDACSGMRFYLLPTEQGKTTCVNFDHVAYIDVCLKTIEMHFIGVEAPMVVTKSPTTLALVAKGMDLSDSGKDLINTL
Ga0302266_1010218733300028779BogMRFYLLPTEQGETTGINFDHVAYVRVGAKSIELHFIGVEKPMVLPKSAVTLSMIAKGMDLSDSSKDLVNAL
Ga0302266_1034997223300028779BogSSMRFYLLPIDQGTTTCINFEHVAYIQLGPQTIELHFIGVEAPMVIKKTATTLSLVAKGMDLSDTSKDLVNTL
Ga0302278_1034008113300028866BogMRFYLLPTEQGETTGINFDHVAYVRVGAKSIELHFIGVEKPMVLPKSAVTLSMIAKGMDLSDSSKDLVN
Ga0302200_1031569423300028909BogMLPTEQGQTTCINFEHVAYIHLGAKTIALHFIGVEAPMVITKTATTLALVAKGMDLSDSSKDLVSTL
Ga0311341_1026958233300029908BogLGAPLSMRFYLLPIDQGTTTCINFEHVAYIQLGPQTIELHFIGVEAPMVIKKTATTLSLVAKGMDLSDTSKDLVNTL
Ga0311369_1048371623300029910PalsaMPCHQSLAANNLTAIVNCACLRHALGMRFYMLPSEQGKTTCINFDHVAYIHLAAQTIELHFIGVEAPMVVTKSPTTLALVAKGMDLSDSSKDLVSTL
Ga0311369_1137419123300029910PalsaMRFYMLPAEAGKTTLINFDHVAFIDISGKAIDIHFIGVEAPMSVTKTATTLSLVAKGMDLSDNSKDLV
Ga0311361_10021471103300029911BogMRFYILPAEQGETTCINFDHVAYIRLGAKTIELHFMGVEAPMVITKSATTLALVAKGMDLSDSSRDLVGTL
Ga0311361_1060940023300029911BogMRFYMLPADQGKTTCINFDHVAYVQLGAQTIELHFIGVEEPMVLTKSAVTLSLVAKGMDLSDSSKDLVNAL
Ga0311362_1015757723300029913BogMRFYMLPTEQGETTCINFEHVAYIRLDAKSIELHFIGVEKPMVVAKSPTTLALVAKGMDLSDTSKDLVSNSEMTASQLWKLV
Ga0311362_1110436413300029913BogMRFYLLPTDQGETTCINFDHVAYIRLRAKEIELHFIGVELPMVITKTPATLALVAKGMDLSDSSKDLVSTL
Ga0311359_1007334843300029914BogMRFYMLPADQGKTTCINFDHVAYIQLGAQTIELHFIGVEEPMVITKSAVTLSLVAKGMDLSDSSKDLVNTL
Ga0311359_1013430933300029914BogMRFYMLPTEQGETTCINFEHVAYIRLDAKSIELHFIGVEKPMVVAKSPTTLALVAKGMDLSDTSKDLVSTL
Ga0311359_1097996413300029914BogHAWEMRFYLLPADQGITTCINFDHVAYIRLGPQTIELHFIGVEAPMVVAKSATTLSLVAKGMDLSDSSKDLVGSL
Ga0311358_1018580223300029915BogMRFYLLPADQGITTCINFDHVAYIRLGPQTIELHFIGVEAPMVVAKSATTLSLVAKGMDLSDSSKDLVGSL
Ga0311358_1034965913300029915BogMRFYLLPADQGTTTCINFDHVAYIQLGAKTIELHFIGVEAPMIVPKTPTTLSLVAKGMDLSDSSKDLVASL
Ga0311328_1036411133300029939BogTEQGKTTCVNFDHVAYIDVCLKTIEMHFIGVEAPMVVTKSPTTLALVAKGMDLSDSGKDLINTL
Ga0311371_1125803323300029951PalsaMRFYMLPSDQGKTTCINFEHVAYIHLGAKTIELHFIGVEAPMIITKSPTTLALVAKGMDLSDSSKDLVGTL
Ga0311346_1027742813300029952BogRSGLGMRFYILPTDQGKTTCINFDHVAVVVIEGGNIELHFAGVETPMVIKKTPTTLAMIGKGMDISDSSKDMVSAL
Ga0311346_1102944723300029952BogDQGKTTCINFDHVAYIQLGAQTIELHFIGVEEPMVITKSAVTLSLVAKGMDLSDSSKDLVNTL
Ga0311343_1006183663300029953BogMRFYILPTDQGKTTCINFDHVAVVVIEGGNIELHFAGVETPMVIKKTPTTLAMIGKGMDISDSSKDMVSAL
Ga0311339_1112532323300029999PalsaMRFYMLPAEQGITTCINFDHVAYIHLGAKTIELHFMGVEAPMVITKTATTLALVAKGMDLSDASKDLVSTL
Ga0311339_1196444223300029999PalsaMRFYMLPTDEGKTTCINFEHVAYIHLGAKTIELHFIGVEAPMIVTKSATTLALVAKGMDLSDSSKDLVSTL
Ga0302270_1008148033300030011BogTCINFDHVAYIRLGAKTIELHFMGVEAPMVITKSATTLALVAKGMDLSDSSRDLVGTL
Ga0311344_1076362023300030020BogMRFYLLPTEQGETTGINFDHVAYVRVGAKSIELHFIGVEKPMVLPKSAVTLSMIAKGMDLSDSSKDL
Ga0311344_1124462313300030020BogMRFFLLPTEQGETTCINFDHVAYIRLGAKSIELHFIGVEAPMVVAKSPTTLALVAKGMD
Ga0311370_1156187713300030503PalsaMRFYMLPSEQGKTTCINFDHVAYIQLGAQTIELHFIGVEAPMVITKSATTLSLVAKGMDLSDSSKDL
Ga0302194_1022712413300030506BogMRFYILPAEQGETICINFDHVAYIRLGAKTIDLHFMGVEAPMVITKTAATLTLVAKGMDLSDSSKDLVSTL
Ga0302192_1017295713300030507BogGPRVDACSGMRFYLLPTEQGKTTCVNFDHVAYIDVCLKTIEMHFIGVEAPMVVTKSPTTLALVAKGMDLSDSGKDLINTL
Ga0311372_1092149133300030520PalsaMRFYMLPAEAGKTTLINFDHVAFIDISGKTIDIHFIGVEAPMSVTKTPTTLSLVAKGMDLSDNSKDLVAAL
Ga0311345_1017127233300030688BogTCINFEHVAYIQLGPQTIELHFIGVEAPMVIKKTATTLSLVAKGMDLSDTSKDLVNTL
Ga0302325_1033997333300031234PalsaMLSAIFSAVVNVPFLRHLDGMRFYMLPAEQGITTCINFDHVAYIHLGAKTIELHFMGVEAPMVITKTATTLALVAKGMDLSDASKDLVSTL
Ga0302325_1064437323300031234PalsaMRFYLLPTEQGKTTCINFDHVTYIRVGAQAIDVYFVGIEAPMIITKTPTTLALIAKGMDLSDSSKDLVGTL
Ga0302325_1266825323300031234PalsaMRFYILPAEQGKTTCINFDHVAYIHLTAQTIELHFIGVEAPMVVTKTPATLSLVAKGMDLSDNSKDLVNSL
Ga0302325_1335055913300031234PalsaMRFYMLPAEQGKTTCINFDHVAYIQLGAQTIELHFIGVEAPMVITKSPTTLALVAKGMDLSDSSKDLVSTL
Ga0302325_1341195913300031234PalsaMRFYLLPTEQGETTCINFDHVAYIRVRAKEIELHFIGVELPMVITKTPTTLALVAKGMDLSDSSKDLVSTL
Ga0302324_10064477913300031236PalsaMGHSLAMRFYMLPSDQGKTTCINFEHVAYIHLGAKTIELHFIGVEAPMIITKSPTTLALVAKGMDLSDSSKDLVGTL
Ga0302324_10090473633300031236PalsaMRFYMLPAEQGKTTCINFDHVAYIQLGAQTIELHFIGVEAPMVITKTPTTLALVAKGMDLSDASKDLVSTL
Ga0302324_10279880713300031236PalsaSLRHSFPMRFYMLPTDEGKTTCINFEHVAYIHLGAKTIELHFIGVEAPMIVTKSATTLALVAKGMDLSDSSKDLVNTL
Ga0302324_10288491723300031236PalsaMRFYMLPPEQGKTTCINFDHVAYIHLGAKTIELHFIGVDAPMVVTKSPTTLALVAKGMDLSDSSKDLVGTL
Ga0302320_1010881943300031524BogMRFYMLPAEQGKTTCINFDHVAYIHLGPQTIELHFIGVEAPMVITKSPTTLALVAKGMDLSDASKDLVSTL
Ga0302320_1057735023300031524BogMRFYMLPAVQGETTCINFDHVAYVRLGAKTIELHFMGVEAPMVITKSAATLALVAKGMDLSDTSKDLVNTL
Ga0302320_1062058513300031524BogKGRPLGHSLGMRFYILPAEQGTTTCINFDHVAYILLGVKTIELHFIGVEAPMVVTKSPATLALVAKGMDLSDSSKDMVSTL
Ga0302320_1083753323300031524BogMRFYLLPIDQGTTTCINFEHVAYIQLGPQTIELHFIGVEAPMVIKKTATTLSLVAKGMDLSDTSKDLVNTL
Ga0302326_1122056323300031525PalsaMRFYILPTDEGKTTCINFDHVAIVVITAASIELHFAGVEAPMVIKKTPTTLSMIGKGMDISDTSKDMVSNL
Ga0302326_1239299723300031525PalsaMRFYMLPAEQGQTTCINFEHVAYIHLGAKTIELHFIGVEAPMVVTKTPTTLALVAKGMDLSDASKDLVSTL
Ga0310686_10041532733300031708SoilMRFYILPTEQGETTCINFDHVAYIRLGAKTIELHFIGVEAPMVITKSPATLSLVAKGMDLSDTSKDMVNAL
Ga0316232_102185333300032605FreshwaterMRFYMLPAEQGKTICINFDHVAYICLGSQTIELHFIGVEAPMVITKSSATLALVAKGMDLSDSSKDLVSTL
Ga0316231_103335743300032722FreshwaterKTICINFDHVAYICLGSQTIELHFIGVEAPMVITKSSATLALVAKGMDLSDSSKDLVSTL
Ga0334804_123374_39_2543300033818SoilMRFFILPADQGETTCVNFDHVAYIRLGPKTIELHFMGVEAPMVITKSPTTLALVAKGMDLSDSSKDLVGTL
Ga0334792_065905_663_8783300033888SoilMRFYILPAEQGETTCINFDHVAYIRLAAKTIELHFMGVEAPMVLTKSAATLALVAKGMDLSDSSKDLVNTL
Ga0370483_0222796_49_2643300034124Untreated Peat SoilMRFYILPTDEGKTTCINFDHVAVVVISGPSIELHFAGVEAPMVIKKTPTTLAMIGKGMDISDASKDMVSNL
Ga0370514_141029_126_3413300034199Untreated Peat SoilMRFYILPTEQGKTTCINFDHVAYIHLGAQTIALHFIGVEAPMVITKSPATLALVAKGMDLSDTSKDMVNAL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.