Metagenome Family F102156

Basic Information
Family ID	F102156
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	59 residues
Representative Sequence	VHVGASQYHDMVPAAALGYRTVFIDRHAETLTTAPTRVLRDLSRLPATIADLE
Number of Associated Samples	92
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.06 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Most Common Taxonomy
Group	Bacteria (74.510 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost (28.431 % of family members)
Environment Ontology (ENVO)	Unclassified (28.431 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.765 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.52% β-sheet: 7.41% Coil/Unstructured: 74.07%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF02548	Pantoate_transf	34.31
PF05977	MFS_3	22.55
PF00664	ABC_membrane	14.71
PF06912	DUF1275	7.84
PF13205	Big_5	3.92
PF00009	GTP_EFTU	2.94
PF08843	AbiEii	0.98
PF00582	Usp	0.98
PF07690	MFS_1	0.98
PF04455	Saccharop_dh_N	0.98
PF13458	Peripla_BP_6	0.98
PF08546	ApbA_C	0.98
PF13242	Hydrolase_like	0.98
PF06983	3-dmu-9_3-mt	0.98
PF01230	HIT	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	34.31
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	22.55
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	7.84
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.98
COG1915	Uncharacterized conserved protein AF1278, contains saccharopine dehydrogenase N-terminal (SDHN) domain	Function unknown [S]	0.98
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.98
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.98
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.51 %
Unclassified	root	N/A	25.49 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.51 %
Unclassified	root	N/A	25.49 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.51 %
Unclassified	root	N/A	25.49 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	29.41 %
Unclassified	root	N/A	25.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.49 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	20.59 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.49 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	15.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.49 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	15.69 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.98 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.98 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.49 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	15.69 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.49 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	15.69 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.98 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000880\|AL20A1W_1008760	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300000886\|AL3A1W_1105622	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300000956\|JGI10216J12902_123869075	Not Available	600	Open in IMG/M
3300001139\|JGI10220J13317_11179001	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300001361\|A30PFW6_1026544	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300001534\|A15PFW1_10161041	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300001536\|A1565W1_10541204	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300001536\|A1565W1_10893063	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300001538\|A10PFW1_10198425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1439	Open in IMG/M
3300002562\|JGI25382J37095_10095346	Not Available	1063	Open in IMG/M
3300002912\|JGI25386J43895_10077234	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300005171\|Ga0066677_10607447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	620	Open in IMG/M
3300005174\|Ga0066680_10159008	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300005177\|Ga0066690_10423186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	903	Open in IMG/M
3300005289\|Ga0065704_10671598	Not Available	573	Open in IMG/M
3300005290\|Ga0065712_10567933	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005294\|Ga0065705_11185241	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005295\|Ga0065707_10047206	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300005295\|Ga0065707_10426007	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005330\|Ga0070690_100510559	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300005345\|Ga0070692_10118115	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300005353\|Ga0070669_100990586	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005356\|Ga0070674_101625887	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005447\|Ga0066689_10277510	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300005468\|Ga0070707_101246113	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005468\|Ga0070707_101420426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M
3300005536\|Ga0070697_100989207	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005540\|Ga0066697_10311621	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300005552\|Ga0066701_10096077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1723	Open in IMG/M
3300005557\|Ga0066704_10841396	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005568\|Ga0066703_10357985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	876	Open in IMG/M
3300005568\|Ga0066703_10531868	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005569\|Ga0066705_10467373	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300005598\|Ga0066706_10322759	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300005840\|Ga0068870_10700342	Not Available	699	Open in IMG/M
3300006796\|Ga0066665_10621144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	865	Open in IMG/M
3300007004\|Ga0079218_11090099	Not Available	813	Open in IMG/M
3300007076\|Ga0075435_101698981	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300009137\|Ga0066709_104543515	All Organisms → cellular organisms → Bacteria → Terrabacteria group	507	Open in IMG/M
3300009147\|Ga0114129_10267604	Not Available	2288	Open in IMG/M
3300009156\|Ga0111538_11477734	Not Available	857	Open in IMG/M
3300009815\|Ga0105070_1124630	Not Available	520	Open in IMG/M
3300009818\|Ga0105072_1142711	Not Available	500	Open in IMG/M
3300009837\|Ga0105058_1134924	Not Available	593	Open in IMG/M
3300010301\|Ga0134070_10161472	Not Available	808	Open in IMG/M
3300010396\|Ga0134126_10579316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1286	Open in IMG/M
3300010399\|Ga0134127_10120863	All Organisms → cellular organisms → Bacteria	2330	Open in IMG/M
3300011991\|Ga0120153_1028431	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300011992\|Ga0120146_1001755	All Organisms → cellular organisms → Bacteria	7070	Open in IMG/M
3300011994\|Ga0120157_1063317	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300011994\|Ga0120157_1080441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	659	Open in IMG/M
3300011999\|Ga0120148_1059507	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300012003\|Ga0120163_1091423	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012008\|Ga0120174_1161398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	518	Open in IMG/M
3300012019\|Ga0120139_1079210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	808	Open in IMG/M
3300012203\|Ga0137399_10541123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	978	Open in IMG/M
3300012353\|Ga0137367_11136950	Not Available	525	Open in IMG/M
3300012354\|Ga0137366_10523137	Not Available	855	Open in IMG/M
3300012358\|Ga0137368_10340315	Not Available	1001	Open in IMG/M
3300012530\|Ga0136635_10273887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	595	Open in IMG/M
3300012532\|Ga0137373_10060237	All Organisms → cellular organisms → Bacteria	3479	Open in IMG/M
3300012532\|Ga0137373_10390059	Not Available	1084	Open in IMG/M
3300012922\|Ga0137394_10195103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1728	Open in IMG/M
3300013294\|Ga0120150_1070080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	669	Open in IMG/M
3300013501\|Ga0120154_1107750	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300013501\|Ga0120154_1137401	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300013503\|Ga0120127_10009218	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300013758\|Ga0120147_1013955	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300013763\|Ga0120179_1037553	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300013763\|Ga0120179_1037961	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300013766\|Ga0120181_1081387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	711	Open in IMG/M
3300013768\|Ga0120155_1116873	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300013772\|Ga0120158_10320164	Not Available	742	Open in IMG/M
3300014052\|Ga0120109_1026072	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300014056\|Ga0120125_1135018	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300014820\|Ga0120160_1022573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1339	Open in IMG/M
3300014829\|Ga0120104_1036282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	907	Open in IMG/M
3300018431\|Ga0066655_10109410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1565	Open in IMG/M
3300021080\|Ga0210382_10032678	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300021080\|Ga0210382_10364533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300021080\|Ga0210382_10536805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	518	Open in IMG/M
3300021344\|Ga0193719_10301729	Not Available	672	Open in IMG/M
3300022756\|Ga0222622_10941683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	634	Open in IMG/M
3300025915\|Ga0207693_10166404	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300025933\|Ga0207706_11404200	Not Available	573	Open in IMG/M
3300025960\|Ga0207651_11233111	Not Available	672	Open in IMG/M
3300026078\|Ga0207702_10027782	All Organisms → cellular organisms → Bacteria	4700	Open in IMG/M
3300026089\|Ga0207648_10703415	Not Available	936	Open in IMG/M
3300026313\|Ga0209761_1009497	All Organisms → cellular organisms → Bacteria	6340	Open in IMG/M
3300026316\|Ga0209155_1200163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300026327\|Ga0209266_1035866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2576	Open in IMG/M
3300026334\|Ga0209377_1219198	Not Available	628	Open in IMG/M
3300026335\|Ga0209804_1184390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	897	Open in IMG/M
3300026342\|Ga0209057_1198006	Not Available	572	Open in IMG/M
3300026528\|Ga0209378_1314975	Not Available	503	Open in IMG/M
3300026540\|Ga0209376_1133690	Not Available	1212	Open in IMG/M
3300027882\|Ga0209590_10600756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	708	Open in IMG/M
3300027886\|Ga0209486_11104764	Not Available	539	Open in IMG/M
3300027961\|Ga0209853_1162806	Not Available	533	Open in IMG/M
3300028824\|Ga0307310_10483394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	622	Open in IMG/M
3300028884\|Ga0307308_10312442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	753	Open in IMG/M
3300032421\|Ga0310812_10228927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	813	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.24%
Host-Associated	Host-Associated	11.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.33%
Plants	Host-Associated → Plants	11.76%
Aquatic	Environmental → Aquatic	4.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.90%
Freshwater	Environmental → Aquatic → Freshwater	3.92%
Sediment	Environmental → Aquatic → Sediment	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.57%
Loam	Environmental → Terrestrial → Soil → Loam	7.84%
Sand	Environmental → Terrestrial → Soil → Sand	3.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Ice	Environmental → Aquatic → Freshwater → Ice	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	28.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	28.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.92%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.96%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000886	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illumina	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014820	Permafrost microbial communities from Nunavut, Canada - A15_80cm_0.25M	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AL20A1W_10087602	3300000880	Permafrost	YHDMVPAAALGYRTVFIDRHAEPLVSSPTRVLRDLVGLPGAIAELER*
AL3A1W_11056222	3300000886	Permafrost	ADTVHIGASQYHDMVPAAALGYRTVFIDRHGESLVSSPTRVLRDLSQLPRTIADLE*
JGI10216J12902_1238690752	3300000956	Soil	GSQYHDMRPASSLGYRTVFVDRHGETLTTRPTRVISDLSTLPKAIDELDRG*
JGI10220J13317_111790011	3300001139	Soil	WRVFRERSGAALEATIHVGASQYHDMRPAGALGYRTVFVDRHGEKLETAPTRVINDLSPLPDVIDALE*
A30PFW6_10265441	3300001361	Permafrost	SETVHVGASQYHDMLPAAALGYRTVFIDRHGESLTTAPTCVLRDLAGLPRAIADLD*
A15PFW1_101610413	3300001534	Permafrost	TGASTADTVHVGASQYHDMVPAAALGYRTVFIDRHAETLMTAPTRVLRDLSRLPATIADLE*
A1565W1_105412042	3300001536	Permafrost	GGSQYHDMLPAAALGFRTVFIDRHAEPLTATPTRVLRDLAPLPRTIADLEG*
A1565W1_108930632	3300001536	Permafrost	LSGASTGDTVHVGASQYHDMVPAAALGYRTVFIDRHAEPLVSSPTRVLSDLSQLPRTIADLE*
A10PFW1_101984252	3300001538	Permafrost	VHVGASQYHDMVPAAALGYRTVFIDRHAETLTTAPTRVLRDLSRLPATIADLE*
JGI25382J37095_100953461	3300002562	Grasslands Soil	TVHVGASQYHDMRPAAALGFRTVFVDRHGEALETSPTRVIGDLRTLPDLIDELATRE*
JGI25386J43895_100772342	3300002912	Grasslands Soil	ERTVHVGASQYHDMRPAAALGFRTXFVDRHGEALETSPTRVIGDLRTLPXLIDELATRE*
Ga0066677_106074471	3300005171	Soil	SQYHDMRPAAALGFRTVFVDRHGEALETSPTRVIRDLAPLPAVIEELARA*
Ga0066680_101590081	3300005174	Soil	ADSTVHVGASQYHDMRPAAALGFRTVFVDRHGEALETSPTRVIRDLAPLPAVIEELARA*
Ga0066690_104231862	3300005177	Soil	HVGASQYHDMRPAAALGFRTVFVDRHGEALETSPTRVIRDLAPLPAVIEELARA*
Ga0065704_106715982	3300005289	Switchgrass Rhizosphere	SQYHDMRPAAALGYRTVFVDRHGEKLETAPTRVISALGALPDAIDALE*
Ga0065712_105679332	3300005290	Miscanthus Rhizosphere	SGATAADSIHVGASQYHDMVPAAALGYRTVFIDRHGEALVSSPTRVLRDLSPLPRTIADLE*
Ga0065705_111852412	3300005294	Switchgrass Rhizosphere	RVFRERSGAAVEATIHVGASQYHDMRPAAALGYRTVFVDRHGEKLETAPTRVISALGALPDAIDALE*
Ga0065707_100472061	3300005295	Switchgrass Rhizosphere	GHWRVFRERSGAAVEATIHVGASQYHDMRPAAALGYRTVFVDRHGEKLETAPTRVISALGALPDAIDALE*
Ga0065707_104260071	3300005295	Switchgrass Rhizosphere	IHVGASQYHDMRPAGALGYRTVFVDRHGEKLETAPMRVINDLSPLPDVIDALE*
Ga0070690_1005105592	3300005330	Switchgrass Rhizosphere	GAAVETTIHVGASQYHDMRPAAAIGYRTVFVDRHGEKLETAPTRVISDLGPLPDVIDALE
Ga0070692_101181152	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VGASQYHDMVPAAALGYRTVFIDRHGETLVSSPTHVLRDLSPLPRTIADLE*
Ga0070669_1009905861	3300005353	Switchgrass Rhizosphere	GHWRIFRERSGAAVETTIHVGASQYHDMRPAAAIGYRTVFVDRHGEKLETAPTRVISDLGPLPDVIDALE*
Ga0070674_1016258871	3300005356	Miscanthus Rhizosphere	PGHWRVFRERSGAAVEATIHVGASQYHDMRPAAALGYRTVFVDRHGEKLETAPTRVIKDLGPLPDAIDALE*
Ga0066689_102775102	3300005447	Soil	STADTVHIGASQYHDMVPGAALGYRTIFIDRHGEPLTSSPTRVLRDLAALPTTIADLE*
Ga0070707_1012461131	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TVHVGASQYHDMRPAAALGFRTVFVDRHGEALETSPTRVIRDLETLPVVIDELAAA*
Ga0070707_1014204261	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SVERTVHVGASQYHDMRPATALGFRTVFIDRHGEKLETSPTHVLPNLSKLPDVIAELAAD
Ga0070697_1009892072	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RVFRERSGAAVEATIHVGASQYHDMRPAAALGYRTVFVDRHGEKLETAPTRVIKDLGPLSDAIDALE*
Ga0066697_103116211	3300005540	Soil	TVHVGASQYHDMIPGAALGYRTIFIDRHGETLASSPTRVLRNLSGLPRAIADLE*
Ga0066701_100960771	3300005552	Soil	SQYHDMRPAAALGFRTVFVDRHGETLETSPTRVIRDLAPLPAVIEELARA*
Ga0066704_108413961	3300005557	Soil	SGASTADTVHIGASQYHDMVPGAALGYRTIFIDRHGEPLTSSPTRVLRDLAALPTTIADLE*
Ga0066703_103579852	3300005568	Soil	HVGASQYHDMRPAAALGFRTVFIDRHGETLETSPTRVLPDLRTLPGVIAELAES*
Ga0066703_105318682	3300005568	Soil	HVGASQYHDMRPAASLGYRTVFVDRHGEALSTKPTRVIGDLAPLPDVIDALE*
Ga0066705_104673731	3300005569	Soil	VHVGASQYHDMVPAAALGYRTVFIDRHGEPLTSSPARVLRDLSSLPSAIADLE*
Ga0066706_103227591	3300005598	Soil	ERTGAGPEGTVHVGASQYHDMRPAAALGYRTVFVDRHGEALSTKPTRVIGDLAPLPDLIDALE*
Ga0068870_107003422	3300005840	Miscanthus Rhizosphere	QYHDMRPGAALGYRTVFVDRHGEKLETAPTRVINDLGPLPDAIDALE*
Ga0066665_106211442	3300006796	Soil	ERSGTSPEQAVHVGASQFHDMRPAAALGFRTIFIDRHTEVLETSPTRVLHDLRALPDVIAELAES*
Ga0079218_110900991	3300007004	Agricultural Soil	ASQYHGMRPAASLGYRTVFVDRHGEKLTTNPTRVISDLSALPAVIDELARG*
Ga0075435_1016989811	3300007076	Populus Rhizosphere	VGASQYHDMVPGAALGYRTVFIDRHAEPLVSSPTRVLRDLSELPSAIAELDR*
Ga0066709_1045435151	3300009137	Grasslands Soil	ASIERTVHVGASQYHDMRPAAGLGFRTVFVDRHGEPLESSPTRVIRDLASLPSLIDELAAA*
Ga0114129_102676041	3300009147	Populus Rhizosphere	SDASADETVHVGASQYHDMRPAASLGYRTVFVDRHGEKLETSPTLVLRDLKSLPDAIDELARG*
Ga0111538_114777342	3300009156	Populus Rhizosphere	ASGHWRIFRERSGAAVETTIHVGASQYHDMRPAAALGYRTVFVDRHGEKLETAPTRVISDLGPLPDVIDALE*
Ga0105070_11246301	3300009815	Groundwater Sand	VHVGASQYHDMRPAASLGYRTVFVDRHGEKLETSPTRVIVDLTSLPEVIDALE*
Ga0105072_11427112	3300009818	Groundwater Sand	QSGASADETVHVGASQYHDMRPAASLGYRTVFVDRHGEKLETSPTRVIVDLTSLPEVIDALE*
Ga0105058_11349241	3300009837	Groundwater Sand	HVGASQYHDMRPAASLGYRTVFVDRHGEKLETSPTRVIVDLTSLPEVIDALE*
Ga0134070_101614721	3300010301	Grasslands Soil	HDMRPAAALGYRTVFVDRHGEKLETAPSRVIADLASLPDVIDALE*
Ga0134126_105793161	3300010396	Terrestrial Soil	SQYHDMRPAAALGFRTVFIDRHGETLETAPTRVLPDLSTLPNVISELAAG*
Ga0134127_101208634	3300010399	Terrestrial Soil	FRERSGAALEATIHVGASQYHDMRPAGALGYRTVFVDRHGEKLETAPTRVINDLSPLPDVIDALE*
Ga0120153_10284312	3300011991	Permafrost	RGSQYHDMLPAAALGFRTVFIDRHAEPLTTTPTRVLRDLAALPEAIADLN*
Ga0120146_10017551	3300011992	Permafrost	GFARLPGARVADTTRVGASQYHDMVPAAALGYRTVFIDRHGEPLTSSPTRVLRDLARLPEAIAELER*
Ga0120157_10633172	3300011994	Permafrost	GPAGGSQYHDMRPAAALGFRTVFIDRHGERLTTAPTRVLPDLSPLALTIAELE*
Ga0120157_10804412	3300011994	Permafrost	LPGAPPADRGHGGGSQYHDMVPAAALGYRTVFIDRHAETLTTAPTRVLRDLSRLPATIADLE*
Ga0120148_10595071	3300011999	Permafrost	SQYHDMRPAAALGFRTVFIDRHGETLETAPTRVLRDLSTLPNVIAELAAG*
Ga0120163_10914231	3300012003	Permafrost	SQYHDMVPAAALGYRTVFIDRHGEPLTSSPTRVLRDLARLPEAIAELER*
Ga0120174_11613982	3300012008	Permafrost	SGASTADTVHVGASQYHDMVPAATLSYRTVFIDRHAEPLVSSPTRVLSDLSQLPRTIADLE*
Ga0120139_10792101	3300012019	Permafrost	LRFAELPGASAAHPVRGGGSQYHDMVPAATLGYRTVFIDRHDETLVSSPTRVLRDLSQLPRTIADLE*
Ga0137399_105411232	3300012203	Vadose Zone Soil	VHVGASQYHDMRPAAALGFRTVFIDRHGEALDTSPTRVLRDVSTLPDVIGELAEG*
Ga0137367_111369502	3300012353	Vadose Zone Soil	ATIHVGASQYHDMRPAASLGYRTVFVDRHRETLESQGHGPLSAKRATRVISDLAPLPDVIDALD*
Ga0137366_105231372	3300012354	Vadose Zone Soil	ASQYHDMRPAAALGYRTVFVDRHGEKLETAPTRVIADLRGLPDVIDALE*
Ga0137368_103403151	3300012358	Vadose Zone Soil	HWRMFSERSAAGPDDTIHVGASQYHDMRPAASLGYRTVFIDRHGETLETAPTRVLRDLALLPGVIDELE*
Ga0136635_102738872	3300012530	Polar Desert Sand	GASQYHDMRPAAELGFRTVFVDRHGEDLVTAPSRVIRDLSVLPETLRRLEERSD*
Ga0137373_100602375	3300012532	Vadose Zone Soil	VFRERTGSDIDATIHVGASQYHDMRPAASLGYRTVFVDRHRETLESQGHGPLSAKRATRVISDLAPLPDVIDALD*
Ga0137373_103900592	3300012532	Vadose Zone Soil	ASQYHDMRPAAALGYRTVFVDRHGEKLETAPTRVIADLASLPDVIDALE*
Ga0137394_101951031	3300012922	Vadose Zone Soil	SQFHDMRPAAALGFRTVFIDRHGETLETSPTRVLRDLSTLPDVIAELAAG*
Ga0120150_10700802	3300013294	Permafrost	FAELSGASTADTVHIGASQYHDMVPAAALGYRTVFIDRHAETLTTAPTRVLRDLSRLPATIADLE*
Ga0120154_11077502	3300013501	Permafrost	HRGGSQYHDMVPAAALGFRTVFIDRHGEPLTTTPARVLPDLAGLPASVAALG*
Ga0120154_11374012	3300013501	Permafrost	WHVGGSQYHDMLPAAALGFRTVFIDRHAEPLTATPTRVLRDLAPLPRTIADLEG*
Ga0120127_100092181	3300013503	Permafrost	SGASAAHTVHVGASQYHDMVPAATLGYRTVFIDRHDETLVSSPTRVLRDLSQLPRTIADLE*
Ga0120147_10139553	3300013758	Permafrost	SAGPPGATPADAGPGGGSQYHDMVPAAALGYRTVFIDRHAETLTTAPTRVLRDLSRLPATIADLE*
Ga0120179_10375531	3300013763	Permafrost	AELPGASWRTWVHRGGSQYHDMVPAAALGYRTVFIDRHGEPLSAKPTRVLRDLRGLPQAIADLEAA*
Ga0120179_10379612	3300013763	Permafrost	TADTVHVGASQYHDMLPAAALGFRTVFIDRHAEPLTATPTRVLRDLAPLPRTIADLEG*
Ga0120181_10813872	3300013766	Permafrost	LSGPPPGDPVHAGGSQYHDMVPAAALGYRTVFIDRHAEPLVSSPTRVLSDLSQLPRTIADLE*
Ga0120155_11168731	3300013768	Permafrost	WKRFAELTGGSPADTVHIGASQYHDMRPAGALRFRTVFIDRHDEPRTTTPTRVLRDLVRLPEAIGELDQ*
Ga0120158_103201642	3300013772	Permafrost	RPGASPAPRVPSAASQYHDMLPAAALGFRTVFIDRHAEPLTATPTRVLRDLAPLPRTIADLEG*
Ga0120109_10260722	3300014052	Permafrost	VHLGASQYHDMVPAAALGYRTVFIDRHAEPLVSSPTRVLRDLVGLPGAIAELER*
Ga0120125_11350182	3300014056	Permafrost	MDESGASTADTVHIGASQYHDMVPAAALGYRTVFIDRHAEPLVSSPTRVLRDLVGLPGAIAELER*
Ga0120160_10225732	3300014820	Permafrost	DTVHVGASQYHDMVPAAALGYRTVFIDRHAETLTTAPTRVLRDLSRLPATIADLE*
Ga0120104_10362821	3300014829	Permafrost	AFKTRVSELPAPPPPHPVHVGASQYHDMVPAATLGYRTVFIDRHDETLVSSPTRVLRDLSQLPRTIADLE*
Ga0066655_101094101	3300018431	Grasslands Soil	STVHVGASQYHDMRPAAALGFRTVFVDRHGEALETSPTRVIRDLAPLPAVIEELARA
Ga0210382_100326781	3300021080	Groundwater Sediment	HVGASQYHDMRPAATLGYRTVFVDRHGEELTTRPTRVIGDLSLLPDAIDDLE
Ga0210382_103645332	3300021080	Groundwater Sediment	QYHDMRPAAALGYRTVFVDRHGETLETQGQGPLSAKRATRVIGDLAPLPDVIDALARA
Ga0210382_105368051	3300021080	Groundwater Sediment	GASQYHDMVPAAALGYRTVFIDRHAEPLVSSPTRVLRDLVGLPGAITELER
Ga0193719_103017292	3300021344	Soil	ERSGAAVEATIHVGASQYHDMRPAAALGYRTVFVDRHGETLETAPTRVINDLGPLPDAIDALE
Ga0222622_109416832	3300022756	Groundwater Sediment	GTVHVGASQYHDMRPAAALGFRTIFIDRHGETLDTSPTRVLRDLSTLPNVIGELAAG
Ga0207693_101664043	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ASVADTIHVGASQYHDMVPAAALGYRTVFIDRHGETLVSSPTRVLHDLSRLPRTIADLE
Ga0207706_114042002	3300025933	Corn Rhizosphere	SQYHDMRPAAAIGYRTVFVDRHGEKLETAPTRVISDLGPLPDVIDALE
Ga0207651_112331112	3300025960	Switchgrass Rhizosphere	RHRAGQRQLQAASGHWRIFRERSGATVESTIHVGASQYHDMRPAAAIGYRTVFVDRHGEKLETAPTRVISDLGPLPDVIDALE
Ga0207702_100277821	3300026078	Corn Rhizosphere	FAELSGATAADTIHVGASQYHDMVPAAALGYRTVFIDRHGEALVSSPTRVLRDLSPLPRTIADLE
Ga0207648_107034151	3300026089	Miscanthus Rhizosphere	RVFRERSGAALEATIHVGASQYHDMRPAGALGFRTVFVDRHGEKLETAPTRVINDLSPLADVIDALE
Ga0209761_10094973	3300026313	Grasslands Soil	GASQYHDMRPAAALGFRTVFVDRHGEALETSPTRVIGDLAPLPAVIEELARA
Ga0209155_12001632	3300026316	Soil	IHVGASQYHDMQPAAALGFRTVFVDRHGEALETSPTRVIRDLETLPDVIDELAAA
Ga0209266_10358661	3300026327	Soil	QYHDMQPAAALGFRTIFIDRHGETLETSPTRVLPDLRSLPDVIAELAEG
Ga0209377_12191981	3300026334	Soil	ERTVHVGASQYHDMRPAAALGFRTVFVDRHDEALETSPTRVIGDLRTLPDLIDELATQE
Ga0209804_11843901	3300026335	Soil	RADSTVHVGASQYHDMRPAAALGFRTVFVDRHGEALETSPTRVIRDLAPLPAVIEELARA
Ga0209057_11980062	3300026342	Soil	ERAGVGPEVTVHVGASQYHDMRPAAALGYRTVFVDRHGEKLETAPTRVIADLASLPDVIDALE
Ga0209378_13149752	3300026528	Soil	GTGPEGTVHVGASQYHDMRPAAALGYRTVFVDRHGEALSTKPTRVIGDLAPLPDLIDALE
Ga0209376_11336903	3300026540	Soil	YHDMRPAAALGYRTVFVDRHGEKLETAPTRVIADLASLPDVIDALE
Ga0209590_106007561	3300027882	Vadose Zone Soil	TTGETVDVGASQYHDMVPPAALGYRTVFIDRHREPLASSPTRVIPDLCSLPKIIAELE
Ga0209486_111047642	3300027886	Agricultural Soil	IHVGASQYHDMRPAAALGFRTVFVDRHGEELVTAPTRVIPDLSTLPEVVAQLG
Ga0209853_11628061	3300027961	Groundwater Sand	AFGHWRMFAERSAAGADVTVHVGASQYHDMRPAAELGYRTVFIDRHGETLVTAPTRVIADLTALPSVIDELE
Ga0307310_104833941	3300028824	Soil	GASQYHDMRPAAALGFRTIFIDRHGETLDTSPTRVLRDLSTLPNVIGELAAG
Ga0307308_103124422	3300028884	Soil	TVHVGASQYHDMRPAAALGFRTIFIDRHGETLETSPTRVLRDLSTLPNVIGELAAG
Ga0310812_102289271	3300032421	Soil	AELSGATAADSIHVGASQYHDMVPAAALGYRTVFIDRHGETLVSSPTHVLRDLSPLPRTIADLE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102156

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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