Metagenome Family F102128

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F102128
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	49 residues
Representative Sequence	MTQDRIVERKTVTETSAAPRETVEKDYVTGAPHGDEEAGGAVGGAV
Number of Associated Samples	57
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	85.29 %
Associated GOLD sequencing projects	43
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (50.980 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (76.471 % of family members)
Environment Ontology (ENVO)	Unclassified (64.706 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (96.078 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01566	Nramp	10.78
PF00486	Trans_reg_C	7.84
PF00892	EamA	5.88
PF01406	tRNA-synt_1e	5.88
PF05532	CsbD	3.92
PF04226	Transgly_assoc	1.96
PF09954	DUF2188	1.96
PF01047	MarR	0.98
PF08734	GYD	0.98
PF09594	GT87	0.98
PF02915	Rubrerythrin	0.98
PF12679	ABC2_membrane_2	0.98
PF13386	DsbD_2	0.98
PF12706	Lactamase_B_2	0.98
PF13784	Fic_N	0.98
PF00665	rve	0.98
PF01522	Polysacc_deac_1	0.98
PF13439	Glyco_transf_4	0.98
PF00072	Response_reg	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	10.78
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	5.88
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	5.88
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	5.88
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	3.92
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.96
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.98
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.98
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.98
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.98
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.98
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.98 %
Unclassified	root	N/A	49.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.98 %
Unclassified	root	N/A	49.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.98 %
Unclassified	root	N/A	49.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.02 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	21.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.02 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	14.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.94 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.96 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.02 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.96 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.96 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.02 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Chloroflexi bacterium RBG_16_69_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14	0.98 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.98 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.02 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.96 %
Rhizobiales bacterium YIM 77505	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium YIM 77505	0.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Chloroflexi bacterium RBG_16_69_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14	0.98 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_211005_len_1635_cov_8_777370	Not Available	1685	Open in IMG/M
2124908035\|B3_GZOS_CLC_ConsensusfromContig130544	Not Available	695	Open in IMG/M
2140918008\|ConsensusfromContig255364	Not Available	636	Open in IMG/M
3300001385\|JGI20193J14888_1003789	All Organisms → cellular organisms → Bacteria	3704	Open in IMG/M
3300001394\|JGI20191J14862_1047669	Not Available	567	Open in IMG/M
3300001397\|JGI20177J14857_1007140	All Organisms → cellular organisms → Bacteria	2283	Open in IMG/M
3300001402\|JGI20195J14853_1034835	Not Available	721	Open in IMG/M
3300001402\|JGI20195J14853_1039519	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300001410\|JGI20179J14886_1007054	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300001871\|JGI24133J20442_1010521	All Organisms → cellular organisms → Bacteria	2590	Open in IMG/M
3300001871\|JGI24133J20442_1060286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	732	Open in IMG/M
3300002066\|JGIcombinedJ21911_10105977	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300002066\|JGIcombinedJ21911_10139532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	684	Open in IMG/M
3300002066\|JGIcombinedJ21911_10186645	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300002068\|JGIcombinedJ21913_10285188	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300002069\|JGIcombinedJ21912_10051781	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300002069\|JGIcombinedJ21912_10079311	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300002069\|JGIcombinedJ21912_10098797	Not Available	1128	Open in IMG/M
3300002069\|JGIcombinedJ21912_10275401	Not Available	536	Open in IMG/M
3300002071\|JGIcombinedJ21915_10074970	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1411	Open in IMG/M
3300002071\|JGIcombinedJ21915_10155292	Not Available	854	Open in IMG/M
3300002071\|JGIcombinedJ21915_10180462	Not Available	770	Open in IMG/M
3300002071\|JGIcombinedJ21915_10195527	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300002071\|JGIcombinedJ21915_10202472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	710	Open in IMG/M
3300002347\|JGIcombinedJ26865_1002582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3221	Open in IMG/M
3300002538\|JGI24132J36420_10095335	Not Available	823	Open in IMG/M
3300002549\|JGI24130J36418_10099012	Not Available	668	Open in IMG/M
3300002549\|JGI24130J36418_10139319	All Organisms → cellular organisms → Bacteria → Terrabacteria group	527	Open in IMG/M
3300002550\|JGI24131J36419_10110091	Not Available	673	Open in IMG/M
3300002551\|JGI24135J36437_1006057	All Organisms → cellular organisms → Bacteria	2478	Open in IMG/M
3300002551\|JGI24135J36437_1030809	Not Available	877	Open in IMG/M
3300002569\|JGI24136J36422_10127600	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005947\|Ga0066794_10159474	Not Available	678	Open in IMG/M
3300006640\|Ga0075527_10042460	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300006642\|Ga0075521_10041079	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300006795\|Ga0075520_1132907	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300006795\|Ga0075520_1149862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1019	Open in IMG/M
3300006795\|Ga0075520_1178931	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300006795\|Ga0075520_1431660	Not Available	525	Open in IMG/M
3300009029\|Ga0066793_10258884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1008	Open in IMG/M
3300009029\|Ga0066793_10879511	Not Available	507	Open in IMG/M
3300009649\|Ga0105855_1303946	Not Available	508	Open in IMG/M
3300014490\|Ga0182010_10312607	Not Available	845	Open in IMG/M
3300014490\|Ga0182010_10326757	Not Available	827	Open in IMG/M
3300014494\|Ga0182017_10245078	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300014494\|Ga0182017_10943390	Not Available	518	Open in IMG/M
3300014498\|Ga0182019_10959063	Not Available	619	Open in IMG/M
3300014498\|Ga0182019_10994472	Not Available	609	Open in IMG/M
3300014502\|Ga0182021_11058180	Not Available	977	Open in IMG/M
3300014502\|Ga0182021_11267566	Not Available	888	Open in IMG/M
3300014502\|Ga0182021_12263226	Not Available	654	Open in IMG/M
3300014502\|Ga0182021_13371197	Not Available	532	Open in IMG/M
3300014839\|Ga0182027_12127496	Not Available	534	Open in IMG/M
3300023311\|Ga0256681_11796150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium YIM 77505	521	Open in IMG/M
3300025461\|Ga0208851_1026186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1101	Open in IMG/M
3300025481\|Ga0208079_1018939	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300025481\|Ga0208079_1024995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1708	Open in IMG/M
3300025481\|Ga0208079_1073236	Not Available	695	Open in IMG/M
3300025481\|Ga0208079_1077405	Not Available	664	Open in IMG/M
3300025484\|Ga0208587_1076561	Not Available	708	Open in IMG/M
3300025484\|Ga0208587_1083153	Not Available	661	Open in IMG/M
3300025484\|Ga0208587_1085467	Not Available	646	Open in IMG/M
3300025495\|Ga0207932_1017151	Not Available	2031	Open in IMG/M
3300025495\|Ga0207932_1103784	Not Available	558	Open in IMG/M
3300025499\|Ga0207931_1024537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1336	Open in IMG/M
3300025533\|Ga0208584_1099379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	698	Open in IMG/M
3300025533\|Ga0208584_1102615	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300025533\|Ga0208584_1121857	Not Available	609	Open in IMG/M
3300025548\|Ga0208716_1003311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14	5217	Open in IMG/M
3300025579\|Ga0207927_1027173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1674	Open in IMG/M
3300025650\|Ga0209385_1121284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	816	Open in IMG/M
3300025692\|Ga0209744_1025881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2269	Open in IMG/M
3300025692\|Ga0209744_1115432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	905	Open in IMG/M
3300025692\|Ga0209744_1149425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	755	Open in IMG/M
3300025716\|Ga0209746_1141617	Not Available	686	Open in IMG/M
3300025725\|Ga0209638_1006738	All Organisms → cellular organisms → Bacteria	6436	Open in IMG/M
3300025725\|Ga0209638_1092862	Not Available	1085	Open in IMG/M
3300025725\|Ga0209638_1125751	Not Available	863	Open in IMG/M
3300025725\|Ga0209638_1130502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	839	Open in IMG/M
3300025739\|Ga0209745_1026099	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2401	Open in IMG/M
3300025739\|Ga0209745_1036338	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300025764\|Ga0209539_1020955	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2956	Open in IMG/M
3300025764\|Ga0209539_1325448	Not Available	518	Open in IMG/M
3300025836\|Ga0209748_1266829	Not Available	556	Open in IMG/M
3300025852\|Ga0209124_10068433	All Organisms → cellular organisms → Bacteria → Proteobacteria	1477	Open in IMG/M
3300025852\|Ga0209124_10253071	Not Available	678	Open in IMG/M
3300025857\|Ga0209014_10004046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8260	Open in IMG/M
3300025857\|Ga0209014_10091143	Not Available	1212	Open in IMG/M
3300025857\|Ga0209014_10136282	Not Available	915	Open in IMG/M
3300025857\|Ga0209014_10158525	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300025864\|Ga0209429_10022120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3154	Open in IMG/M
3300025865\|Ga0209226_10194970	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300025888\|Ga0209540_10074219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2094	Open in IMG/M
3300025888\|Ga0209540_10132102	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300025888\|Ga0209540_10216167	Not Available	1128	Open in IMG/M
3300025888\|Ga0209540_10230328	Not Available	1084	Open in IMG/M
3300025891\|Ga0209585_10154242	Not Available	888	Open in IMG/M
3300030010\|Ga0302299_10365327	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300030019\|Ga0311348_11452729	Not Available	509	Open in IMG/M
3300030943\|Ga0311366_10634942	Not Available	929	Open in IMG/M
3300031238\|Ga0265332_10456179	Not Available	529	Open in IMG/M
3300034281\|Ga0370481_0411534	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.02%
Host-Associated	Host-Associated	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.04%
Aquatic	Environmental → Aquatic	0.98%
Plants	Host-Associated → Plants	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.10%
Peat	Environmental → Terrestrial → Peat	2.94%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.94%
Lake	Environmental → Aquatic → Freshwater → Lake	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	79.41%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	14.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	76.47%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	10.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.94%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.94%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.96%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.98%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.98%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2124908035	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300001385	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012	Environmental	Open in IMG/M
3300001394	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012	Environmental	Open in IMG/M
3300001397	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012	Environmental	Open in IMG/M
3300001402	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012	Environmental	Open in IMG/M
3300001410	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012	Environmental	Open in IMG/M
3300001871	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311	Environmental	Open in IMG/M
3300002066	Barrow Graham LP Ref core NGADG0002-211 (Barrow Graham LP Ref core NGADG0002-211,NGADG0004-311, ASSEMBLY_DATE=20131004)	Environmental	Open in IMG/M
3300002068	Barrow Graham LP Ref core NGADG0004-212 (Barrow Graham LP Ref core NGADG0004-212,NGADG0011-311, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002069	Barrow Graham LP Ref core NGADG0002-212 (Barrow Graham LP Ref core NGADG0002-212,NGADG0004-211, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002071	Barrow Graham LP Ref core NGADG0011-312 (Barrow Graham LP Ref core NGADG0011-312,NGADG0011-212, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002347	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (NGEE Surface samples 415 (1, 2, 3 deep-072012) AP id is 1030520, ASSEMBLY_DATE=20131219)	Environmental	Open in IMG/M
3300002538	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300002550	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211	Environmental	Open in IMG/M
3300002551	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211	Environmental	Open in IMG/M
3300002569	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300025461	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025495	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025499	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025692	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)	Environmental	Open in IMG/M
3300025716	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025739	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312 (SPAdes)	Environmental	Open in IMG/M
3300025764	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312 (SPAdes)	Environmental	Open in IMG/M
3300025836	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025864	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_00592770	2088090004	Soil	MTQERIVERKTVTESSPAPRETVEKDYVTGVPHGDEEAGGAVGGAVA
B3_GZOS_CLC_01201390	2124908035	Soil	MTQDRIVERKTVTETSAAPRETVEKDYVTGAPHGDEEAGGAVGGAVA
Bog_all_C_02056020	2140918008	Soil	MTQDRIVERKTVTETSAAPRETVEKDYVTGAPHGDEEAGGAVGGAV
JGI20193J14888_10037891	3300001385	Arctic Peat Soil	MTQERIVERKTVPESSAAPRETVEKDYVAGVPHGDEEAGGAVGGAVGGAVVGAVVG
JGI20191J14862_10476691	3300001394	Arctic Peat Soil	MTQERIVERKTXTEXSPAPXETIEKDYVTGAPHGDEEAGGAVGGAV
JGI20177J14857_10071405	3300001397	Arctic Peat Soil	MTQERIVERKTVPESSAAPRETVEKDYVAGVPHGDEEAGGAVGGAVGGAV
JGI20195J14853_10348351	3300001402	Arctic Peat Soil	MTQERIVERKTVTESSPAPHETIEKDYVTGAPHGDEEAGGAVRGAVAGAVVG
JGI20195J14853_10395192	3300001402	Arctic Peat Soil	MTEDRVIERETVTESSPAPRETVEKDYVAGVPHGDEE
JGI20179J14886_10070541	3300001410	Arctic Peat Soil	MTQERIVERKTVTESSAAPRETVEKDYVAGAPHGDEEAGGAVGGAVGGAVVGAVVG
JGI24133J20442_10105211	3300001871	Arctic Peat Soil	MTEHRVIESETITEDGAEHREALRKDYVSGAPHGDEEAGGAVAGGVAGAVVGAVVGGPVGAVV
JGI24133J20442_10602862	3300001871	Arctic Peat Soil	MTQERNVERKTVTESSAAPRETVEKDYVAGVPHGDEEAGGAV
JGIcombinedJ21911_101059773	3300002066	Arctic Peat Soil	MTQERIVERKTVTESSPAPHETVEKDYVTGVPHGDEEAGGAVGGAVAGAVAGAVVG
JGIcombinedJ21911_101395322	3300002066	Arctic Peat Soil	MTEDRVVEQKTVTDSSPAPRETVEKDYVTGAPHGDEEAGGAVGGAVA
JGIcombinedJ21911_101866452	3300002066	Arctic Peat Soil	MTEDRVVERKTVTESSPAPHETIEKDYVTGAPHGDEEAGGAVG
JGIcombinedJ21913_102851881	3300002068	Arctic Peat Soil	MTEDRVVERKTVTESSPAPHETIEKDYVTGAPHGDEEAGGAVGG
JGIcombinedJ21912_100517811	3300002069	Arctic Peat Soil	MTEDRVVERETVTESSPAPRETVEKDYVTGAPHGDEE
JGIcombinedJ21912_100793112	3300002069	Arctic Peat Soil	MTQERVVEQKTVTETSAAPRETVEKDYVTGAPHGDEEAGGAVGGAVAGAVVGAVVGGPVG
JGIcombinedJ21912_100987971	3300002069	Arctic Peat Soil	MTQDRIVERKTVTESSAAPRETVEKDYVTGVPHGD
JGIcombinedJ21912_102754012	3300002069	Arctic Peat Soil	MTQERIVERKTVPESSAAPRETVEKDYVAGVPHGDEEAGGAVGGAV
JGIcombinedJ21915_100749703	3300002071	Arctic Peat Soil	MTEDRVIEXETVTEQTVEPHETIEKDYVTGAPHGDEEAGGAVGGAVGGAV
JGIcombinedJ21915_101552922	3300002071	Arctic Peat Soil	MTQERIVERKTVTESSAAPRETVEKDYVAGVPHGDEEVGGAV
JGIcombinedJ21915_101804621	3300002071	Arctic Peat Soil	MTQERNVERKTVTETSPAPHETVEKDYVTGAPHGDEEAGGAVGGAVGGAVVGA
JGIcombinedJ21915_101955271	3300002071	Arctic Peat Soil	MTEDRVVERKTVTESSPAPHETIEKDYVTGAPHGDEEAGGAVGGAVGGAV
JGIcombinedJ21915_102024721	3300002071	Arctic Peat Soil	MTQERIVERKTVTESSPAPRETIEKDYVTGAPHGDEEAGGAVGGAVA
JGIcombinedJ26865_10025821	3300002347	Arctic Peat Soil	MTQERIVASETITDDGVERRETLRKDYVQGAQHGDEEAGGAVAVGVAGAVVGAVVGGPVGAVV
JGI24132J36420_100953352	3300002538	Arctic Peat Soil	MTQERIVERKTVTESSAAPRETVEKDYVAGVPHGDEEAGGAVGGAVGGAVVGAVVGGPV
JGI24130J36418_100990122	3300002549	Arctic Peat Soil	MTQERIVERKTVPESSAAPRETVEKDYVAGVPHGDEEAGGAVGG
JGI24130J36418_101393192	3300002549	Arctic Peat Soil	MTQERNVERKTVTESSAAPRETVEKDYVAGVPHGDEEAGGAVGGAVGGAVVGAVVGGP
JGI24131J36419_101100911	3300002550	Arctic Peat Soil	MTQERIVERKTVTESSPAPHETIEKDYVTGAPHGDEEAGGAVGGAV
JGI24135J36437_10060571	3300002551	Arctic Peat Soil	MTERRIVESDITDDGVERRETLRKDYVSGAPHGDEEAGGAVAGGVAGAVVGAVVGGPVGAVV
JGI24135J36437_10308091	3300002551	Arctic Peat Soil	MTQERIVERKTVPESSAAPRETVEKDYVAGVPHGDEEAGG
JGI24136J36422_101276001	3300002569	Arctic Peat Soil	MTEDRVVERKTVTESSPAPHETIEKDYVTGAPHGDEEAGGAVGGAVG
Ga0066794_101594742	3300005947	Soil	MTERRVTESETVTRTGGEPRETVEKDYVTGVPHGDEEAGGAVAG
Ga0075527_100424601	3300006640	Arctic Peat Soil	MTQERIVEQKTVTESSPAPRETVEKDYVTGVPHGDE
Ga0075521_100410791	3300006642	Arctic Peat Soil	MTQERVVEQKTVTETSAAPRETIEKDYVTGAPHGDEEAGGAVGGAVAGAVVGAVVGGPV
Ga0075520_11329074	3300006795	Arctic Peat Soil	MTEDRVVEQKTVTETSSAPRETVEKDYVTGAAHGDEEAGGAVGGAVAGAVVGAVVGGP
Ga0075520_11498622	3300006795	Arctic Peat Soil	MTQERNVERTTVTESSAAPRETVEKDYVAGVPHGDEEAGGAVGGAVGGA
Ga0075520_11789311	3300006795	Arctic Peat Soil	MTQERIVERTTVTETSAAPRETIEKDYVTGAPHGDEEAGGAVGGAVAGAVVGAVVGGP
Ga0075520_14316601	3300006795	Arctic Peat Soil	MTQERIVERKTVTESSAAPRETVEKDYVAGVPHGDEEAGGAVGG
Ga0066793_102588841	3300009029	Prmafrost Soil	MTEHRIIERETVTEQAVEPHGTIEKDFATGVPHGDEEAGGAVGGAVGGAIVGAVVGG
Ga0066793_108795111	3300009029	Prmafrost Soil	MTQERIVERKTVTDTSAAPHETIEKDYVTGAPHGDEEAGGAVGGAVGGAVVGA
Ga0105855_13039462	3300009649	Permafrost Soil	MTQERIVERKTVTESSAAPRETVEKDYVTGVPHGDEE
Ga0182010_103126071	3300014490	Fen	MTERIVKTETVTESNAAPHETIEKDYVTGAPHGDEEAGG
Ga0182010_103267571	3300014490	Fen	MTERISKTETVTETSAAPRETVEKDYVTGAPHGDEE
Ga0182017_102450781	3300014494	Fen	MTQDRIVERKTVTETSAAPRETVEKDYVTGAPHGDEEAGGAVGGAVAGAVVGAVVGGPVG
Ga0182017_109433901	3300014494	Fen	MTQDRIVERKTVTETSAAPRETVEKDYVTGAPHGDEEAGGAVGGAVAGAVVGAVVG
Ga0182019_109590631	3300014498	Fen	MTERIVKTETVTEGSAAPRETVEKDYVTGAPHGDEEAGGAVGGAVAGAVVGA
Ga0182019_109944721	3300014498	Fen	MTQERIVERTTVTETSAAPRETIEKDYVTGAPHGDEEAGGAVGGAVAGAVVGAVVGGPVGAV
Ga0182021_110581801	3300014502	Fen	MTQERIVERKTVSETSPAPHETIEKDYVTGAPHGDEEAGGAVGG
Ga0182021_112675662	3300014502	Fen	MTQDRIVERKTVTETSAAPRETVEKDYVTGAPHGDEEAGGAVGGA
Ga0182021_122632262	3300014502	Fen	MTQERIVERTTVTETSAAPRETIEKDYVTGAPHGDEEAGGAVGGAVAGAVVGAVVG
Ga0182021_133711971	3300014502	Fen	MTERIVETETVTSDGAERRETLHKDSELGVPHGDEEAGGA
Ga0182027_121274961	3300014839	Fen	MTERIVKTETVTEGSAAPHETIEKDYVTGAPHGDEEAGGAVGGAVAGAVVGAVVGGPVGA
Ga0256681_117961501	3300023311	Freshwater	MTQDRIVERKTVTETSAAPRETVEKDYVTGAPHGDEEAGGAVGGAVAGAVVGAVVGGPVGAVVG
Ga0208851_10261861	3300025461	Arctic Peat Soil	MTEKTTVVRETTTEQAAEPRETVEKDYQTGIPHGDEEAGGAVGGA
Ga0208079_10189393	3300025481	Arctic Peat Soil	MTEDRVIERETVTESSPAPRETVEKDYVTGAPHGD
Ga0208079_10249953	3300025481	Arctic Peat Soil	MTQERNVERTTVTESSAAPRETVEKDYVAGVPHGDEEAGGAVGGA
Ga0208079_10732362	3300025481	Arctic Peat Soil	MTQERMVEQKTVTETSAAPRETIEKDYVTGAPHGDEEAGGAVGG
Ga0208079_10774051	3300025481	Arctic Peat Soil	MTQERIVERKTVTDTSAAPHETIEKDYVTGAPHGDEEAGGA
Ga0208587_10765611	3300025484	Arctic Peat Soil	MTQERIVERKTVTESSPAPHETIEKDYVTGAPHGDEEAGGAVGGAVAGAV
Ga0208587_10831532	3300025484	Arctic Peat Soil	MTQERVVEQKTVTETSAAPRETVEKDYVTGAPHGDEEAGGAVGGAVAGAVVGAVVG
Ga0208587_10854671	3300025484	Arctic Peat Soil	MTQERIVERKTVTESSAAPRETVEKDYVTGVPHGDEEAGGAVGGAVAGGVVGAVV
Ga0207932_10171515	3300025495	Arctic Peat Soil	MTQERIVERKTVTESSAAPRETVEKDYVAGAPHGDEE
Ga0207932_11037841	3300025495	Arctic Peat Soil	MTEKTTTVRETTTEQPVEPRETVEKDYQTGIPHGDEEAGGAAGGA
Ga0207931_10245371	3300025499	Arctic Peat Soil	MTQERNVERKTVTETSPAPHETVEKDYVTGAPHGDEEAGGAVGGAVGGA
Ga0208584_10993791	3300025533	Arctic Peat Soil	MTERRIVESDITDDGVERRETLRKDYVSGAPHGDEEAGGAVAGGVAGAVVGAVVGGPVGA
Ga0208584_11026152	3300025533	Arctic Peat Soil	MTDRIVERETITDDGAERRETLREDYVPGAPRHGDEEAGGAVAGGVGGAVVGAVVGGPVGAVVG
Ga0208584_11218572	3300025533	Arctic Peat Soil	MTEDRVVERKTATESGAAPRETVEKDYVAGVPHGDEEAGGAVGGA
Ga0208716_10033111	3300025548	Arctic Peat Soil	MTQERIVERKTATESSPAPRETIEKDYVTGAPHGDEEAGGAVGGAVAGAVV
Ga0207927_10271731	3300025579	Arctic Peat Soil	MTQERNVERTTVTESSAAPRETVEKDYVTGVPHGDEEAGGAVGGAVGGAVVGAVVGGPV
Ga0209385_11212842	3300025650	Arctic Peat Soil	MTEDRVVEQKTVTETSSAPRETVEKDYVTGAPHGDEEAGGAVGG
Ga0209744_10258813	3300025692	Arctic Peat Soil	MTQERIVERKTVTESSAAPHETIEKDYVTGAPHGDEE
Ga0209744_11154321	3300025692	Arctic Peat Soil	MTQERNVERKTVTESSAAPRETVEKDYVAGVPHGDEEAGGAVGGAVGGAVVGAVVGGPVGAVV
Ga0209744_11494253	3300025692	Arctic Peat Soil	MTEKTTTVRETTTEQPAEPRETVEKDYQTGIPHGDEEAGGAAGGAVGGAVVGAV
Ga0209746_11416171	3300025716	Arctic Peat Soil	MTQERIVERKTVTDTSAAPRETVEKDYVTGAPHGDEEAGGAVGGAVGG
Ga0209638_10067381	3300025725	Arctic Peat Soil	MTQERIVERTTVTESSPAPRETVEKDYVTGAPHGDEEAGGAVGGAVAGAVVGA
Ga0209638_10928621	3300025725	Arctic Peat Soil	MTQERIVERKTVSETSPAPHETIEKDYVTGAPHGDEEAGGAVG
Ga0209638_11257511	3300025725	Arctic Peat Soil	MTQERIVERKTVTESSPAPRETVEKDYVTGVPHGD
Ga0209638_11305023	3300025725	Arctic Peat Soil	MTEDRVVEQKTVTDSSPAPRETVEKDYVTGAPHGDEEAGGAVGGAVAGAVVGA
Ga0209745_10260994	3300025739	Arctic Peat Soil	MTEDTTIVRETTTEHAVEPHESIEKDYQTGVPHGDEEAGGAAGGAVAGAVVGAVVGGPV
Ga0209745_10363381	3300025739	Arctic Peat Soil	MTERRVTESETVTRTGGEPRETVEKDYVTGVPHGDEEAGGAVGGA
Ga0209539_10209554	3300025764	Arctic Peat Soil	MTQERNVERKTVTESSAAPRETVEKDYVAGVPHGDEEAGGAVGGAVGGAVVGAVVGGPVGAV
Ga0209539_13254482	3300025764	Arctic Peat Soil	MTERRVTESETVTRTGGEPRETVEKDYVTGVPHGDEEAGGAVVGAVVGAVVGAVVGGPV
Ga0209748_12668291	3300025836	Arctic Peat Soil	MTQERIVERKTVPESSAAPRETVEKDYVAGVPHGDEEAGGAVGGAVGGAVVGAVVGGPVG
Ga0209124_100684331	3300025852	Arctic Peat Soil	MTQERIVERKTVTESSPAPRETIEKDYVTGAPHGDE
Ga0209124_102530711	3300025852	Arctic Peat Soil	MTQERIVERKTVSETSPAPHETIEKDYVTGAPHGDEEAGGAV
Ga0209014_100040461	3300025857	Arctic Peat Soil	MTQERLVERKTVTESSAAPRETVEKDYVTGVPHGDEEAGGAVGGAVGGAVVGAV
Ga0209014_100911432	3300025857	Arctic Peat Soil	MTQERIVERKTVSETSPAPHETIEKDYVTGAPHGDEEAGGAVGGAVAGAVVG
Ga0209014_101362821	3300025857	Arctic Peat Soil	MTERRVTESETVTRTGGEPRETVEKDYVTDVPHGDEEAGGAVAGAVGGAVVGAVVGGPVGAV
Ga0209014_101585253	3300025857	Arctic Peat Soil	MTEDRVVEQKTVTDSSPAPRETVEKDYVTGAPHGDEEAGGAVGGAV
Ga0209429_100221201	3300025864	Arctic Peat Soil	MTEDRVIERETVTESSPAPRETVEKDYVTGAPHGDEEAGGAVGGAVGGAVVGAVVGGPV
Ga0209226_101949701	3300025865	Arctic Peat Soil	MTEDRVVERKTVTESSPAPHETIEKDYVTGAPHGDEEAGGAVGGAVGGAVVGAV
Ga0209540_100742191	3300025888	Arctic Peat Soil	MTQERNVERKTVTETSPAPHETVEKDYVTGAPHGDEEAGGAVGGAVGGAVVGAVV
Ga0209540_101321023	3300025888	Arctic Peat Soil	MTEDRVIERETVTESSPAPRETVEKDYVTGAPHGDEEAGGAVGGAVGGA
Ga0209540_102161672	3300025888	Arctic Peat Soil	MTQERVVEQKTVTETSAAPRETVEKDYVTGAPHGDEEAGGAV
Ga0209540_102303281	3300025888	Arctic Peat Soil	MTQERIVERKTVTESSPAPHETIEKDYVTGAPHGDEEAGGA
Ga0209585_101542421	3300025891	Arctic Peat Soil	MTEDRVIERETVTESSPAPRETVEKDYVAGVPHGDEEAGGAVGG
Ga0302299_103653273	3300030010	Fen	MTEKTTIVRETTTEQAAEPRETVEKDYQTGVPHGDEEAGGAVGGAVAGA
Ga0311348_114527291	3300030019	Fen	MTEKTTTVRETTTERAVEPRETVERDYQTGIPHGDEEAGGAVGGAVAGAVVGAVVGG
Ga0311366_106349421	3300030943	Fen	MTQERIVERTTVTETSAAPRETIEKDYVTGAPHGDEEAGGAVGG
Ga0265332_104561791	3300031238	Rhizosphere	MTEHTIIERETVTDTSAAPRETVEKDIVAGVPHGD
Ga0370481_0411534_3_122	3300034281	Untreated Peat Soil	MTQERIVERKTVTESSPAPRETVEKDYVTGVPHGDEEAGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102128

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences