Metagenome / Metatranscriptome Family F102118

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102118
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	94 residues
Representative Sequence	KDIKQFVESVLPKLWSTYFDEGTPTTLFENNVAHLKITGLQIKHLYFEYLIMGFFQKALKIFGKKTVAKKVRSISSGDNDIYFQFELKES
Number of Associated Samples	73
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.01 %
% of genes near scaffold ends (potentially truncated)	89.22 %
% of genes from short scaffolds (< 2000 bps)	80.39 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.157 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen (20.588 % of family members)
Environment Ontology (ENVO)	Unclassified (34.314 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.314 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.81% β-sheet: 25.42% Coil/Unstructured: 45.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
d.278.1.2: Ligand-binding domain in the NO signalling and Golgi transport	d2j3wb1	2j3w	0.75
d.278.1.2: Ligand-binding domain in the NO signalling and Golgi transport	d2j3wb1	2j3w	0.75
d.278.1.2: Ligand-binding domain in the NO signalling and Golgi transport	d1sz7a_	1sz7	0.71
d.278.1.2: Ligand-binding domain in the NO signalling and Golgi transport	d1sz7a_	1sz7	0.71
d.280.1.1: Sulfolobus fructose-1,6-bisphosphatase-like	d3t2ca_	3t2c	0.66
d.280.1.1: Sulfolobus fructose-1,6-bisphosphatase-like	d3t2ca_	3t2c	0.66
d.278.1.3: Ligand-binding domain in the NO signalling and Golgi transport	d2osoa2	2oso	0.65
d.278.1.3: Ligand-binding domain in the NO signalling and Golgi transport	d2osoa2	2oso	0.65
d.104.1.1: Class II aaRS and biotin synthetases	d12asa_	12as	0.64
d.104.1.1: Class II aaRS and biotin synthetases	d12asa_	12as	0.64

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF04321	RmlD_sub_bind	7.84
PF00155	Aminotran_1_2	4.90
PF00581	Rhodanese	2.94
PF13426	PAS_9	2.94
PF01578	Cytochrom_C_asm	2.94
PF13472	Lipase_GDSL_2	1.96
PF01042	Ribonuc_L-PSP	1.96
PF01416	PseudoU_synth_1	1.96
PF04002	RadC	1.96
PF14522	Cytochrome_C7	0.98
PF00216	Bac_DNA_binding	0.98
PF03840	SecG	0.98
PF00990	GGDEF	0.98
PF01228	Gly_radical	0.98
PF13487	HD_5	0.98
PF01548	DEDD_Tnp_IS110	0.98
PF00709	Adenylsucc_synt	0.98
PF02773	S-AdoMet_synt_C	0.98
PF08447	PAS_3	0.98
PF05154	TM2	0.98
PF03692	CxxCxxCC	0.98
PF13643	DUF4145	0.98
PF08388	GIIM	0.98
PF02371	Transposase_20	0.98
PF01966	HD	0.98
PF02481	DNA_processg_A	0.98
PF13183	Fer4_8	0.98
PF12392	DUF3656	0.98
PF01979	Amidohydro_1	0.98
PF01145	Band_7	0.98
PF11746	DUF3303	0.98
PF08238	Sel1	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	15.69
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	15.69
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	15.69
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	7.84
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	7.84
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	7.84
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	7.84
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	7.84
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.96
COG0101	tRNA U38,U39,U40 pseudouridine synthase TruA	Translation, ribosomal structure and biogenesis [J]	1.96
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	1.96
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	1.96
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.96
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.98
COG1314	Protein translocase subunit SecG	Intracellular trafficking, secretion, and vesicular transport [U]	0.98
COG0192	S-adenosylmethionine synthetase	Coenzyme transport and metabolism [H]	0.98
COG2314	Uncharacterized membrane protein YozV, TM2 domain, contains pTyr	General function prediction only [R]	0.98
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.14 %
Unclassified	root	N/A	6.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.16 %
Unclassified	root	N/A	6.86 %
Viruses	superkingdom	All Organisms → Viruses	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.16 %
Unclassified	root	N/A	6.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.33 %
Unclassified	root	N/A	6.86 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.96 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	82.35 %
Unclassified	root	N/A	6.86 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.96 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	82.35 %
Unclassified	root	N/A	6.86 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.96 %
Spirochaetes bacterium RBG_16_49_21	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_49_21	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	10.78 %
Unclassified	root	N/A	6.86 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.96 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.96 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.98 %
Spirochaetes bacterium RBG_16_49_21	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_49_21	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	10.78 %
Unclassified	root	N/A	6.86 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.96 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.98 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12	0.98 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.98 %
Spirochaetes bacterium RBG_16_49_21	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_49_21	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Smithella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella	7.84 %
Unclassified	root	N/A	6.86 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	1.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.96 %
Syntrophus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus	0.98 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.98 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12	0.98 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.98 %
Spirochaetes bacterium RBG_16_49_21	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_49_21	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Smithella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella	6.86 %
Unclassified	root	N/A	6.86 %
Cystobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter	1.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.96 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	0.98 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.98 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12	0.98 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.98 %
Spirochaetes bacterium RBG_16_49_21	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_49_21	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.86 %
Smithella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	4.90 %
Smithella sp. SCADC	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp. SCADC	1.96 %
Cystobacter fuscus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter fuscus	1.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.96 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	0.98 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.98 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12	0.98 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.98 %
Spirochaetes bacterium RBG_16_49_21	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_49_21	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_100819861	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	609	Open in IMG/M
3300001213\|JGIcombinedJ13530_101698343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	721	Open in IMG/M
3300001410\|JGI20179J14886_1021637	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	556	Open in IMG/M
3300003432\|JGI20214J51088_10781603	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	618	Open in IMG/M
3300003852\|Ga0031655_10064018	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1561	Open in IMG/M
3300003852\|Ga0031655_10124174	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300003852\|Ga0031655_10156343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	884	Open in IMG/M
3300003852\|Ga0031655_10262169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter fuscus	648	Open in IMG/M
3300004152\|Ga0062386_100556382	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	935	Open in IMG/M
3300004282\|Ga0066599_100939183	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	623	Open in IMG/M
3300004282\|Ga0066599_101165580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter fuscus	573	Open in IMG/M
3300006795\|Ga0075520_1046185	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2106	Open in IMG/M
3300009009\|Ga0105105_10890585	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	545	Open in IMG/M
3300009131\|Ga0115027_10417351	Not Available	943	Open in IMG/M
3300009519\|Ga0116108_1080912	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	997	Open in IMG/M
3300009615\|Ga0116103_1059538	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1051	Open in IMG/M
3300009615\|Ga0116103_1119279	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	659	Open in IMG/M
3300009617\|Ga0116123_1190464	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	521	Open in IMG/M
3300009617\|Ga0116123_1194929	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	513	Open in IMG/M
3300009630\|Ga0116114_1125887	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_49_21	666	Open in IMG/M
3300009644\|Ga0116121_1087322	Not Available	975	Open in IMG/M
3300009666\|Ga0116182_1049397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2390	Open in IMG/M
3300009669\|Ga0116148_1075686	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1734	Open in IMG/M
3300009669\|Ga0116148_1276557	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	696	Open in IMG/M
3300009693\|Ga0116141_10236373	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	990	Open in IMG/M
3300009775\|Ga0116164_10005755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	8079	Open in IMG/M
3300009775\|Ga0116164_10009745	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5848	Open in IMG/M
3300009782\|Ga0116157_10011186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	7547	Open in IMG/M
3300010356\|Ga0116237_10088380	All Organisms → cellular organisms → Bacteria	3226	Open in IMG/M
3300014152\|Ga0181533_1290243	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	597	Open in IMG/M
3300014160\|Ga0181517_10609029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	546	Open in IMG/M
3300014199\|Ga0181535_10099059	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp. SCADC	1881	Open in IMG/M
3300014257\|Ga0075319_1037586	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	836	Open in IMG/M
3300014490\|Ga0182010_10034585	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	2353	Open in IMG/M
3300014490\|Ga0182010_10367615	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	780	Open in IMG/M
3300014490\|Ga0182010_10537098	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	649	Open in IMG/M
3300014490\|Ga0182010_10796298	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	536	Open in IMG/M
3300014494\|Ga0182017_10029389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	3745	Open in IMG/M
3300014494\|Ga0182017_10237256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1155	Open in IMG/M
3300014494\|Ga0182017_10900218	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	532	Open in IMG/M
3300014496\|Ga0182011_10045130	All Organisms → cellular organisms → Bacteria	3135	Open in IMG/M
3300014496\|Ga0182011_10114168	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1879	Open in IMG/M
3300014496\|Ga0182011_10277845	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	1117	Open in IMG/M
3300014496\|Ga0182011_10685932	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	647	Open in IMG/M
3300014498\|Ga0182019_10152661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1464	Open in IMG/M
3300014502\|Ga0182021_10730745	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300014502\|Ga0182021_11569642	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	793	Open in IMG/M
3300014502\|Ga0182021_12077086	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	684	Open in IMG/M
3300014502\|Ga0182021_12456449	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	627	Open in IMG/M
3300014502\|Ga0182021_12998854	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	565	Open in IMG/M
3300014839\|Ga0182027_12043778	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	548	Open in IMG/M
3300014839\|Ga0182027_12167614	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	528	Open in IMG/M
3300017940\|Ga0187853_10045631	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella	2265	Open in IMG/M
3300017988\|Ga0181520_10084051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp. SCADC	2797	Open in IMG/M
3300018020\|Ga0187861_10055518	All Organisms → Viruses → Predicted Viral	2043	Open in IMG/M
3300018030\|Ga0187869_10301186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	771	Open in IMG/M
3300018035\|Ga0187875_10060650	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	2190	Open in IMG/M
3300018057\|Ga0187858_10406876	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	845	Open in IMG/M
3300019082\|Ga0187852_1014349	All Organisms → cellular organisms → Bacteria	4137	Open in IMG/M
3300019220\|Ga0179936_1165851	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	539	Open in IMG/M
3300019785\|Ga0182022_1224660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1677	Open in IMG/M
3300019788\|Ga0182028_1270648	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1388	Open in IMG/M
3300022653\|Ga0236337_1138621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1176	Open in IMG/M
3300023101\|Ga0224557_1260399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	569	Open in IMG/M
3300023258\|Ga0224535_1048483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	976	Open in IMG/M
3300024238\|Ga0224523_1065117	Not Available	876	Open in IMG/M
3300024240\|Ga0224522_1156742	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	519	Open in IMG/M
3300025444\|Ga0208189_1051945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	775	Open in IMG/M
3300025448\|Ga0208037_1071898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	622	Open in IMG/M
3300025725\|Ga0209638_1066291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1396	Open in IMG/M
3300025764\|Ga0209539_1227826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	673	Open in IMG/M
3300025784\|Ga0209200_1004531	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	11208	Open in IMG/M
3300025865\|Ga0209226_10297911	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	679	Open in IMG/M
3300025871\|Ga0209311_1154103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	956	Open in IMG/M
3300025877\|Ga0208460_10356454	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	532	Open in IMG/M
3300025888\|Ga0209540_10103833	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	1740	Open in IMG/M
3300027896\|Ga0209777_10224325	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1494	Open in IMG/M
3300027896\|Ga0209777_10454600	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	953	Open in IMG/M
3300027896\|Ga0209777_10471351	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	931	Open in IMG/M
3300027896\|Ga0209777_11213622	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	503	Open in IMG/M
3300027902\|Ga0209048_10007881	Not Available	9777	Open in IMG/M
3300030000\|Ga0311337_10782734	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	827	Open in IMG/M
3300030019\|Ga0311348_10527107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	882	Open in IMG/M
3300030230\|Ga0302207_1152995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	593	Open in IMG/M
3300030339\|Ga0311360_10604697	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	876	Open in IMG/M
3300031232\|Ga0302323_100829645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1018	Open in IMG/M
3300031258\|Ga0302318_10240798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	884	Open in IMG/M
3300031344\|Ga0265316_10151780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1735	Open in IMG/M
3300031726\|Ga0302321_100484864	All Organisms → cellular organisms → Bacteria → Proteobacteria	1361	Open in IMG/M
3300032397\|Ga0315287_11919013	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	655	Open in IMG/M
3300033405\|Ga0326727_10453066	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	1143	Open in IMG/M
3300033418\|Ga0316625_102192042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	550	Open in IMG/M
3300033483\|Ga0316629_11761316	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	511	Open in IMG/M
3300033521\|Ga0316616_102481831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	695	Open in IMG/M
3300033521\|Ga0316616_102992747	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	637	Open in IMG/M
3300033820\|Ga0334817_060454	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300033890\|Ga0334810_132792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	600	Open in IMG/M
3300034091\|Ga0326724_0053260	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12	2922	Open in IMG/M
3300034091\|Ga0326724_0187393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	1242	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.25%
Engineered	Engineered	11.76%
Host-Associated	Host-Associated	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.02%
Aquatic	Environmental → Aquatic	38.24%
Wastewater	Engineered → Wastewater	11.76%
Plants	Host-Associated → Plants	0.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	35.29%
Soil	Environmental → Terrestrial → Soil	32.35%
Peat	Environmental → Terrestrial → Peat	16.67%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	11.76%
Marine	Environmental → Aquatic → Marine	2.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	26.47%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	16.67%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	11.76%
Lentic	Environmental → Aquatic → Freshwater → Lentic	9.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.96%
Lake	Environmental → Aquatic → Freshwater → Lake	1.96%
Pond	Environmental → Aquatic → Freshwater → Pond	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	20.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	16.67%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	11.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.78%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	9.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	8.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.88%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	20.59%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	11.76%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	9.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	8.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.88%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	5.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	5.88%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.92%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.94%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.94%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	1.96%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.98%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.98%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.98%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001410	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009693	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG	Engineered	Open in IMG/M
3300009775	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC109_MetaG	Engineered	Open in IMG/M
3300009782	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC048_MetaG	Engineered	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014257	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D1	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019220	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Illinois, USA ? AD_UKC059_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022653	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W1	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300023258	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 30-34	Environmental	Open in IMG/M
3300024238	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T50	Environmental	Open in IMG/M
3300024240	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T25	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025448	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025764	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312 (SPAdes)	Environmental	Open in IMG/M
3300025784	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025871	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025877	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030230	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E2_2	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033820	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-D	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1008198611	3300001213	Wetland	KVAAQFALSSEGPYKSYLLTKDIKQFVELVLPKLWSTYFDEGQATTLFVNNIIHLKITGIQIKHYYFEKLLMGYFQKAIKLFGKKTVAKQVRSISSGDDDIYFQYTLKDS*
JGIcombinedJ13530_1016983432	3300001213	Wetland	SFMLTKDIKQFVETMLPKVWSTYFDSGVAIALLENNVAHIKITGLEIKYNYFEYLVMGYFQQAIKMFGKKSVAKRVRSLASGDKDIYFQYELKDS*
JGI20179J14886_10216372	3300001410	Arctic Peat Soil	GGPYNSYMLTKDIKQFIESILPKLWSTYFDEGIPTTLFENNVAHLKITGLQIKNLYFEYLIMGYFQKALKMFGKKTVAKRIRSISSGDNDIYFQFELKDS*
JGI20214J51088_107816031	3300003432	Wetland	ESVLPKLWSTYYDEGKVTTKFENNVVHLKITELQIKHYYFEQLLMGYFQKALKIFGKKNVAKQVRSISSGNDDIYFQFGLKDS*
Ga0031655_100640181	3300003852	Freshwater Lake Sediment	VELVLPKLWSTYFDEGNGITKFENNIAHFKITGIQIKNLYFEYLVMGYFQKALKIFGKKSVSKKVRSLASGDNDIYFQFELKDS*
Ga0031655_101241742	3300003852	Freshwater Lake Sediment	MLTKDIKQFVESVLPKIWTMYFDSGVTTARLENNVAHIKITGIQYKYTYFEYLVMGYFQQAIKMFGKKSVAKKVRSISSGDKDIYFTYELKDS*
Ga0031655_101563431	3300003852	Freshwater Lake Sediment	FALPKLWSTYYDGGTITTKFENNIVHIKITGVDVKYIYFEHLLMGYFQQSLKVFGHKSVAKKVRSIVQGDNDIYFQFELKDS*
Ga0031655_102621691	3300003852	Freshwater Lake Sediment	DVKKYVETVLPKLWSTYFDEGTPVTRFENNVAHLKVTGLQIKHLYFEYLIMGFFQKALKMFGKKSVAKKVRSISSGDDDIYYQFELKDS*
Ga0031655_103146431	3300003852	Freshwater Lake Sediment	MQYVTFGKLAAQFALSSEGPYKSYLLTKDTKQFVESVLPKLWSTYFDEGKATTKFENNIIHFKITGLQIKHSYFEKLLMGYFQKALKIFGKKTVAKQVRSLASGDDDIYFQFELKDS*
Ga0062386_1005563822	3300004152	Bog Forest Soil	EKLAAQFALSSEGPYKSYLLTKDTKQFVESVLPKLWSTYFDEGKATALFENNIVHFKITELQIKHYYFEQLLMGYFQKAIKIFGKKTVAKQVRSLASGGNDIYFQFELKDS*
Ga0066599_1009391832	3300004282	Freshwater	ALSSEGPYKSYLLTKDVKQYVETVLPKLWSTYFDEGVPVAIFDNNIVHLKVTGLKFKHLYFEHLIMGFFQKALKMFGKKCVSKKIRSMSSGDADIYYQFEMKD*
Ga0066599_1011655801	3300004282	Freshwater	AQYALSPQGTYKSYMLTKDIKQFVEFVLPKLWSTYFDGGRATSKLENNVAHIKITGIEIKNLYFEYFIMGYFQKAFKIFGKKTVAKQVKSISSGDDEIYFQFGIKDS*
Ga0075520_10461854	3300006795	Arctic Peat Soil	PEGPYKSYLLTKDTKQFVESVMPKLWSTYFDEGKATALFENNIVHFKITGLQTKHFYFEKLLMGYFQQAIKIFGKKTVAKQVRSISSGDDDIYFQYELKNS*
Ga0105105_108905851	3300009009	Freshwater Sediment	KSYMLTKDIKQFVEFVLPKLWSTYFDGGRATAKLENNVAHIKITGIEIKNLYFEYFIMGYFQKAFKIFGKKTVAKQVRSISSGDGEIYFQFTIKDS*
Ga0115027_104173512	3300009131	Wetland	KLWSTYYDQGIITTKYENNIVHIKITGVNVKYIYFEHLLMGYFQQALKVFGKKSVAKKVRSIVQGDGDIYFQFELKDS*
Ga0116108_10809121	3300009519	Peatland	SYLLTKDTKQFVESVLPKLWSTYFDEGKAITKFENNIVHFKITGLQIKHYYFEKLLMGYFQKAIKIFGKKTVAKQIRSLASGDDDIYFQYELKES*
Ga0116103_10595382	3300009615	Peatland	LTKDIKQFVEFVLPKIWSTYFDGGITTARLENNIVHLKITGLQIKDIYFEYCIMGYFQQALKIFGKKSVPKRVRSLSSGDDDIYFQFELKDS*
Ga0116103_11192791	3300009615	Peatland	SVLPKLWSTYFDEGIVTALFENNVAHLKITGLPIKHLYFEYLIMGFFQKALKIFGKKTVAKKVRSISSGNDDIYFQFELKDS*
Ga0116123_11904641	3300009617	Peatland	VEFVLPKLWSTFYDGGVTTARLENNVAHIKLTGIDIKNVYFEQMINGYFQQALKVFGKKSVAKKIRSLASGDDDIYFQYELKDA*
Ga0116123_11949292	3300009617	Peatland	STYFDEGMATTMFDNNVAHLKITGLRIKNIYFEYLIMGYFQQALKMFGKKSIPKRIRSLSSGDDDIYFQFELKDS*
Ga0116114_11258871	3300009630	Peatland	KDTKQFVEFVLPKLWSTYYDGGVATARLENNVAHIKLTGIDFKNLYFEQMIKGYFQQALKVFGKKSVAKKIRSLASGDDDIYFQYELKDA*
Ga0116121_10873223	3300009644	Peatland	AYLLKKDMKLFVESVLTKLWSTYFDKGIVITKFENNVVHLKITRLQIKHFYFEKLLMGYFQKALKIFGKKTVVKQVRSISSGNDDIYFTYELKDS*
Ga0116182_10493971	3300009666	Anaerobic Digestor Sludge	MKQFVESVLPKVWSTYFDSGVAVAKFENNVAHIKITGLEIKYTYFEYLVMGYFQQAIKMFGSKSSAKRIRSLAAGDKDMYFQYALKDS*
Ga0116148_10756861	3300009669	Anaerobic Digestor Sludge	PDGIYKSYLLTKDTKQFVETVMPKFWSTYFDEGVVTTRFENNVAHLKITGLNFRHNYFEFLIMGFFQKSLKMFGKKNVPKRIRSRASGDEDVYFQFELKNA*
Ga0116148_12765571	3300009669	Anaerobic Digestor Sludge	TKDTKQFVESVMPKFWSTYFDEGTVTTKYENNIAHLKITGLNFRHNYFEYLIMGFFQKSLKMFGKKNVPKRIRSRASGDDDVYFQFELKDS*
Ga0116141_102363733	3300009693	Anaerobic Digestor Sludge	LLTKDTKQFVESVMPKFWSTYFDEGTVTTKYENNIAHLKITGLNFRHNYFEYLIMGFFQKSLKMFGKKNVPKRIRSRASGDDDVYFQFELKDS*
Ga0116164_100057551	3300009775	Anaerobic Digestor Sludge	GLYKSYLLTKDTKQFVESVMPKFWSTYFDEGTVTTKYENNITHLKITGLNFRHNYFEYLIMGFFQKSLKMFGKKNVPKRIRSRASGDDDVYFQFELKDS*
Ga0116164_100097457	3300009775	Anaerobic Digestor Sludge	GLYKSYLLTKDTKQFVESVMPKFWSTYFDEGTVTTKYENNIAHLKITGLNFRHNYFEYLIMGFFQKSLKMFGKKNVPKRIRSRASGDDDVYFQFELKDS*
Ga0116157_100111869	3300009782	Anaerobic Digestor Sludge	SPDGLYKSYLLTKDTKQFVESVMPKFWSTYFDEGTVTTKYENNITHLKITGLNFRHNYFEYLIMGFFQKSLKMFGKKNVPKRIRSRASGDDDVYFQFELKDS*
Ga0116237_100883801	3300010356	Anaerobic Digestor Sludge	DGLYKSYLLTKDTKQFVESVMPKFWSTYFDEGTVTTKYENNIAHLKITGLNFRHNYFEYLIMGFFQKSLKMFGKKNVPKRIRSRASGDDDVYFQFELKDS*
Ga0181533_12902431	3300014152	Bog	SYMLTKDIKQFVELVLPKLWSTYFDEGECITKLENNIAHLKITGIQIKNLHFEYLAMGYFQKALKMFGKKSVAKKIRSLASGDNDVYFQFELKES*
Ga0181517_106090291	3300014160	Bog	DIKPFVESVLPKLWSTYFDEGIATTRFENNVAHLKITGLRIKNIYFEYLIMGYFQQALKIFGKKSVPKRVRSLSSGDDDIYFQFELKDS*
Ga0181535_100990593	3300014199	Bog	IKPFVESVLPKLWSTYFDEGMATTIFENNVAHLKITGLRIKNIYFEYLIMGYFQQALKIFGKKSVPKRVRSLSSGDDDIYFQFELKDS*
Ga0075319_10375861	3300014257	Natural And Restored Wetlands	ALSPEGPYKSYLLSRDLKQFVDFALPKLWATYFDGGVCTTKLENNIVHFKVTGIQIKHYYFEQLLMGYFQQSIKVFGKKSVAKQVRGISSGDEDIYFQYALKDS*
Ga0182010_100345851	3300014490	Fen	PKLWSTYFDEGKATALFENNIVHLKITGLQIKHYYFEQLLMGYFQKAIKIFGKKTVAKQVRSLASGGNDIYFQFELKDS*
Ga0182010_103676151	3300014490	Fen	KDLKQFVESVLPKVWSMYFDSGVTTARLENNIAHIKITGIQIKCTYFEYLVMGYFQQAIKMFGKKSIAKKVRSIASGNEDIYFTYELKDS*
Ga0182010_105370982	3300014490	Fen	ESVMPKFWSTYFDEGTVTTIFANNVAHLKITGLQFKHLYFEYLIMGYFQKALKMFGKKSVPKRIRSMSAGDDDIYFQFELKDS*
Ga0182010_107962981	3300014490	Fen	YKSYMLIKDIKQFVEFVLPKLWSTYFDEGRTTTKLENNIIHLKITGLQIKNIYFEYFVMGYFQKAIKIFGKKTVAKQVRSISSGDEDIYFQFALKDS*
Ga0182017_100293893	3300014494	Fen	MLTKDIKQFVEFVLPKLWSTYFDEGRTTTKLENNIIHLKITGLQIKNIYFEYFVMGYFQRAIKIFGKKTVAKQVRSIASGDEDIYFQFALKDT*
Ga0182017_102372562	3300014494	Fen	QYALSSEGPYKSYLLTKDIKQFVESVLPKLWSTYFDEGKPVTLFENNVAHLKITGLTIKNLYFEYLIMGFFQKALKLFGKKTVAKKVRSISSGDDDIYFQFELKDS*
Ga0182017_109002181	3300014494	Fen	IKQFVDFALPKLWVTYFDGGVCTTKLENNIVHFKVTGVQIKHYYFEQLLMGYFQQSIKVFGKKSVAKQVRGISSGDEDIYFQYALKDS*
Ga0182011_100451301	3300014496	Fen	VLPKLWSTYFDEGNSITKFENNIAHLKITGIQIKNLYFEYLVMGYFQKALKIFGKKSVAKKVRSLASGDNDIYFQFELKDS*
Ga0182011_101141681	3300014496	Fen	GAQYALSPEGPYKSYMLTKDIKQFVEVVLPKLWSTYFDGGRTTTKLENNVVHLKITGIEIKNYYFEQLLMGYFQQALKMFGKKSVAKRIRSISSGDDDIYFQFELKDS*
Ga0182011_102778451	3300014496	Fen	KLWSTYFDEGTPTTLFENNVAHLKITGLQIKHLYFEYLIMGFFQKALKIFGKKTVAKKVRSISSGDNDIYFQFELKDS*
Ga0182011_106859321	3300014496	Fen	SVLPKLWSTYFDEGTPTTLFENNVAHLKISGLQIKHLYFEYLIMGFFQKALKIFGKKTVAKKVRSLASGDDDIYFQFELKDS*
Ga0182019_101526611	3300014498	Fen	LESPAPNSFCSREACTILLYSIKDIKHFVEFVLPKLWSTYYDGGTITTNLENNIVHVKITGVNVKYIYFEHLLMGYFQQALKVFGKKSVAKKVRGIVQGDNDIYFQFELKDS*
Ga0182021_107307451	3300014502	Fen	EGPYKSYLLTKDIKQFVESVLPKLWSTYFDEGKPITMFENNVAHLKITGLQIKHLYFEYLIMGFFQKALKIFGKKTVAKKVRSISSGDNDIYFQFELKDS*
Ga0182021_115696422	3300014502	Fen	VESVLPKLWSTYFDESKATTKFENNIVHFKITGLQIKHSYFEKLLMGYFQKALKIFGKKTVAKQVRSLASGDDDIYFQYELKDS*
Ga0182021_120770861	3300014502	Fen	SVLPKLWSTYFDEGTPTTLFENNVAHLKISGLQIQHLYFEYRIMGFFQKALKIFGKKTVTKKVRRLAQGDDDIYFQYELKDS*
Ga0182021_124564491	3300014502	Fen	ESVLPKVWSMYFDSGVTTARLENNVAHIKITGIQIKYTYFEYLVMGYFQQAIKMFGKKSVAKRIRSLASGDEDIYFQFELNES*
Ga0182021_129988541	3300014502	Fen	VLPKLWSTYFDEGKPVTLFENNVAHLKITGLTIKNLYFEYLIMGFFQKALKLFGKKTVAKKVRSLSSGDDDIYFQFELKDS*
Ga0182027_120437781	3300014839	Fen	PKLWSTYFDEGVPTTLLENNIAHLKITGLQIKNLYFEYLIMGYFQKALKMFGKKTVAKRIRSISSGDDDIYFQFELKDS*
Ga0182027_121676141	3300014839	Fen	MLTKDIKQFVEFVLPKLWSTYFDEGRTTTKLENNIIHLKITGLQIKNIYFEYFVMGYFQRAIKIFEKKTVAKQVRSIASGD
Ga0187853_100456314	3300017940	Peatland	LPKLWSTYFDEGMATTIFENNVAHLKITGLRIKNIYFEYLIMGYFQQALKMFGKKSVPKRVRSLSSGDDDIYFQFELKDS
Ga0181520_100840511	3300017988	Bog	GKVGAKVALSPGGPYQSYLLTKDIKPFVESVLPKLWSTYFDEGIATTRFENNVAHLKITGLRIKNIYFEYLIMGYFQQALKIFGKKSVPKRVRSLSSGDDDIYFQFELKDS
Ga0187861_100555181	3300018020	Peatland	LSSEGPYKSYLLTKDIKQFVASVLPKLWSTYFDEGKVTTLFENNIVHFKITELQFKHYYFEKLLMGYFQKALKIFGKKTVAKQVRSISSGDKDIYFQFALKDS
Ga0187869_103011862	3300018030	Peatland	DLKQFIEVVLPKLWSTYSDEGECITKFENNVAHLKITGIQIKNLYFEYLAMGYFQKALKMFGKKSVAKKIRSLASGDNDVYFQFELKES
Ga0187875_100606503	3300018035	Peatland	LKKDMKLFVESVLTKLWSTYFDKGIVITKFENNVVHLKITRLQIKHFYFEKLLMGYFQKALKIFGKKTVVKQVRSISSGNDDIYFTYELKDS
Ga0187858_104068762	3300018057	Peatland	IKQFVEFVLPKLWSTYFDGGIATAQIENNVAHLKITGLPIKNIYFEYLIMGYFQQALKLFGKKTVAKRVRGISSGDDDLYFQFELKDS
Ga0187852_10143493	3300019082	Peatland	PEGPYTAYLLKKDMKLFVESVLTKLWSTYFDKGIVITKFENNVVHLKITKLQIRHYYFEKLLMGYFQKALKIFGKKTVVKQVRSISSGNDDIYFTYELQDS
Ga0179936_11658511	3300019220	Anaerobic Digestor Sludge	KQFIETVLPKVWSSYFDSGVAVAKFENNVAHIKITGLEIKYTYFEYLVMGYFQQAIKMFGKKSSAKRIRSLAAGDKDMYFQYALKDS
Ga0182022_12246601	3300019785	Fen	MMQYVTFGKLAAQFALSSEGPYKFYLLTKDTRQFVESVLPKLWSTYFDEGKATALFENNVAHLKITELQIKHYYFEYLVMGYYQKALKYSGRKVLQKRSGVLHRR
Ga0182028_12706483	3300019788	Fen	IGRSVQIISAHKGYKQYIAVLPRIWSTYCDEGIGTTWIENNIVHMENHRTKIKHIYFEYLIMGFFQKALKMFGKKSVAKKVRSISSGDDDIYIQFELKDS
Ga0236337_11386212	3300022653	Freshwater	QYALSPEGSYKSYMLTKDIKQFVEFVLPKLWSTYFDEGRTTTKLENNIIHLKITGLQIKNIYFEYFVMGYFQRAIKIFGKKTVAKQVRSIASGDEDIYFQFALKDS
Ga0224557_12603992	3300023101	Soil	KQYVESVLPKLWSTYFDEGKPITMFENNVAHLKITGLQIKHLYFEYLIMGFFQKALKIFGKKTVAKKVRSISSGDNDIYFQFELKDS
Ga0224535_10484832	3300023258	Soil	SPGGPYQSYLLTKDIKPFVESVLPKLWSTYFDEGIATTRFENNVAHLKITGLQIKNIYFEYLIMGYFQQALKIFGKKSVPKRVRSLSSGDDDIYFQFELKDS
Ga0224523_10651171	3300024238	Soil	IEQYIAVLPRIWSTYCDEGICTTWIENNIVHFKITGLKIKHLYFEYLIMGFFQKAFKVFGKKSVVKKVRSLVSGDNDIYFQYELKDS
Ga0224522_11567422	3300024240	Soil	DIKQFVEFVLPKLWSTYFDEGRTTTKLENNIIHLKITGLQINNIYFEYFVMGYFQRAIKIFGKKTVAKQVRSIASGDEDIYFQFALKDT
Ga0208189_10519451	3300025444	Peatland	QFALSPEGPYKSYLLTKDTKQFVESVLPKLWSTYFDEGKAITKFENNIVHFKITGLQIKHYYFEKLLMGYFQKAIKIFGKKTVAKQIRSLASGDDDIYFQYELKES
Ga0208037_10718981	3300025448	Peatland	LSPEGPYKSYLLTKDTKQFAEFVLPKLWSTYFDEGKAIAKFENKIVHLKITGLQIKHSYFEKLLMGYFQKALKIFGKKTVAKQVRSLASGDDDIYFQYELKDA
Ga0209638_10662911	3300025725	Arctic Peat Soil	YTLSPEGPYKSYLLTKDTKQFVESVLPKIWSTLFVEGIPTTLFENNVAHLKITGLQIKNIYFEYLIMGYFQKALKIFGKKTVAKRVRSISSGDDDIYFQFELKDS
Ga0209539_12278261	3300025764	Arctic Peat Soil	PYKSYMLTKDIKQFIESVLPKLWSTYFDEGIPTTLFENNVAHLKITGLQIKNLYFEYLIMGYFQKALKMFGKKYVAKRVRSISSGDDDIYFQFKLKDS
Ga0209200_100453115	3300025784	Anaerobic Digestor Sludge	DGLYKSYLLTKDTKQFVESVMPKFWSTYFDEGTVTTKYENNITHLKITGLNFRHNYFEYLIMGFFQKSLKMFGKKNVPKRIRSRASGDDDVYFQFELKDS
Ga0209226_102979111	3300025865	Arctic Peat Soil	TFGKAAAQYALSSEGPYKSYLLTKDIKQFVESVLPKLWSTYFDEGKPVTLFENNVAHLKITGLTIKNLYFEYLIMGFFQKAIKLFGKKTVAKKVRSLSSGDDDIYFQFELKDS
Ga0209311_11541033	3300025871	Anaerobic Digestor Sludge	YKSYLLTKDTKQFVESVMPKFWSTYFDEGTVTTKYENNIAHLKITGLNFRHNYFEYLIMGFFQKSLKMFGKKNVPKRIRSRASGDDDVYFQFELKDS
Ga0208460_103564541	3300025877	Anaerobic Digestor Sludge	AAQFALSPDGLYKSYLLTKDTKQFVESVMPKFWSTYFDEGTVTTKYENNITHLKITGLNFRHNYFEYLIMGFFQKSLKMFGKKNVPKRIRSRASGDDDVYFQFELKDS
Ga0209540_101038331	3300025888	Arctic Peat Soil	FVLPKLWSTYFDGGITTARFENNIVHIKITGLQIKHLYFEYLVMGYFQKALKLFGKKTVAKRVRSIASGDEDIYFQFELKDS
Ga0209777_102243252	3300027896	Freshwater Lake Sediment	SPEGPYKSYMLTKDIKQFVEFVLPKIWSTYFDEGKATVKFENNIVHLKITGIQIKNLYFEHLVMAYFQKAIKMFGKKSVAKQVRSISSGDEDIYFQYELKDS
Ga0209777_104546001	3300027896	Freshwater Lake Sediment	SYLLTKDIKQFVESGLPKIWSTYYDGGAVTTRFENNIVHLKITGLTINNFNFESLVMGFFQQAIKVFGKKTVAKRIRNISSGDDDIYFQYELKDS
Ga0209777_104713511	3300027896	Freshwater Lake Sediment	EGPYKSYLLTKDIKQFVESVLPKLWSTYYDEGKVTTKFENNVVHLKITELQVKHYYFEQLLMGYFQKALKIFGKKNVAKQVRSISSGNDDIYFQFGLKDS
Ga0209777_112136222	3300027896	Freshwater Lake Sediment	KDIKQFIESVIPKVWTMYFDSGVTTARLENNVAHIKITGIQIKYTYFEYLVMGYFQQAIKMFGKKSIAKKVRSIASGDEDVYFTYELKDS
Ga0209048_1000788112	3300027902	Freshwater Lake Sediment	MFMLIKDIKQFIESVLPKVWTMYFDSGVTTARLENNIAHIKITGIQIKYTYFEYLVMGYFQQAIKMFGKKSVAKKVRSIASGNEDIYFTYELKDS
Ga0311336_119546571	3300029990	Fen	NYVTFGKLAAQFALSSEGPYKSYLLTKDTKQFVESVLPKLWSTYFDEGKATALFENKIVHFKITGLKIKHYYFEQLLIGYFQKAIKIFGKKTVAKQVRSLASGDDDIYFQFALKDS
Ga0311337_107827342	3300030000	Fen	VGSRVALSPEGPYKSYLLSKDIKQFVDFALPKLWVTYFDGGVCTTKLENNIVHFKVTGVQIKHYYFEQLLMGYFQQSIKVFGKKSVAKQVRGISSGDEDIYFQYALKDS
Ga0311348_105271072	3300030019	Fen	KDIKQFVESVLPKLWSTYFDEGTPTTLFENNVAHLKITGLQIKHLYFEYLIMGFFQKALKIFGKKTVAKKVRSISSGDNDIYFQFELKES
Ga0302207_11529951	3300030230	Fen	KDIKQFVESVLPKLWSTYFDEGTPTTLFENNVAHLKITGLQIKHLYFEYLIMGFFQKAIKMFGKKSVAKKVRSISSGDADIYYQFDLKES
Ga0311360_106046972	3300030339	Bog	KQFVDFVLPKLWSTYFDEGRTITKLENNIIHLKITGLQIKNIYFEYFVMGYFQRAIKIFGKKTVAKQVRSIASGDEDIYFQFALKDT
Ga0302323_1008296452	3300031232	Fen	MLIKDIKQFVEFVLPKLWSTYFDEGRNTTKLENNIIHLKITGLQIKNIYFEYFVMGYFQRAIKIFGKKTVAKQVRSIASGDEDIYFQFALKDT
Ga0302318_102407983	3300031258	Bog	SVLPKLWSTYFDEGKPITMFENNVAHLKITGLQIKHLYFEYLIMGFFQKALKIFGKKTVAKKVRSISSGDNDIYFQFELKDS
Ga0265316_101517802	3300031344	Rhizosphere	IRPFVESVLPKLWSTYFDEGMATTMFENNVAHLKITGLRIKNIYFEYLIMGYFQQALKMFGKKSVPKRVRSLSSGDDDIYFQFELKDS
Ga0302321_1004848643	3300031726	Fen	STYFDEGIPVTRYENNVAHLKVTGLQIKHLYFEYLIMGFFQKAIKMFGKKSVAKKVRSISSGDADIYYQFDLKES
Ga0315287_119190132	3300032397	Sediment	QYVETVLPKLWSTYFDEGVPVAIFDNNIVHIKVTGLKFKHLYFEHLIMGFFQKAIKMFGKKSVGKKIRSISSGDADIYYQFEIKDA
Ga0326727_104530662	3300033405	Peat Soil	AAQFALSSEGPYAAYLLKKDMKLFVESVLTKLWSTYFDKGIVITKFENNVVHLKITRLQIKHFYFEKLLMGYFQKALKIFGKKTVVKQVRSISSGNDDIYFTYELKDS
Ga0316625_1017471991	3300033418	Soil	PKIYSMYFDGGAAIARLENNVVHIKFTGIDIKNVYFEQMLRGYFQKAIKMFGKKSTVKQVRSLVGGDKDIYFQYELRDA
Ga0316625_1021920421	3300033418	Soil	ESGLPKLWSTYYDGGAVTTRFENNIVHLKITGLTIKNFNFESLVMGFFQQAIKVFGKKTVAKRVRSISSGDNDIYYQFELKD
Ga0316629_117613162	3300033483	Soil	VEFVLPKLWSTYFDGGRATAKFENNVAHIKITGIEIKNLYFEYFIMGYIQQAFKIFGKKSDVKKVRSIVSGDEDIYFQFELKDS
Ga0316616_1024818312	3300033521	Soil	ALPKLWTTYFDGGECKTWLENNIIHFKVTGVDFKHYYFEQTLMGYFQKAIKVFGRKTIAKQVRSLSRGDNDIYFQYTLKD
Ga0316616_1029927472	3300033521	Soil	MLTKDIKQFVEFVIPKLWSTYWDGGKTTAKLENNVAHVKVTGIDIKNIYFEYFIMGYIKQAFKIFGKKTVVKKVRSIVSGDDDIYFHFELKDS
Ga0334817_060454_424_735	3300033820	Soil	ALSSEGPYKSYLLTKDIEQYIAVLPRIWSTYCDEGICTTWIENNIVHFKITGLKIKHLYFEYLIMGFFQKAFKVFGKKSVVKKVRSLVSGDNDIYFQYELKDS
Ga0334810_132792_12_365	3300033890	Soil	MQYVTFGKLAAQFALSSEGPYKSYLLTKDTKQFIESVLPKLWSTYFDEGKATALFENNVAHLKITGLTIKNLYFEYLIMGFFQKALKLFGKKTVAKKVRSLSSGDDDIYFQFELKDS
Ga0326724_0053260_2_346	3300034091	Peat Soil	VTFGKVAAQFALSPEGPYTAYLIKKDMKLFVESVLTKLWSTYFDKGIVITKFENNVVHLKITKLQIRHYYFEKLLMGYFQKAIKIFGKKTVVKQVRSISSGNEDIYFTYELQDS
Ga0326724_0187393_6_272	3300034091	Peat Soil	MKLFVESVLTKLWSTYFDKGIVITKFENNVVHLKITRLQIKHFYFEKLLMGYFQKALKIFGKKTVVKQVRSISSGNDDIYFTYELKDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102118

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences