Metagenome / Metatranscriptome Family F102108

Basic Information
Family ID	F102108
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	42 residues
Representative Sequence	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNEEGKEDEAF
Number of Associated Samples	89
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.14 %
% of genes near scaffold ends (potentially truncated)	98.04 %
% of genes from short scaffolds (< 2000 bps)	94.12 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (86.275 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (21.569 % of family members)
Environment Ontology (ENVO)	Unclassified (62.745 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (84.314 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1DelMOSpr2010_101758531 2DelMOSpr2010_102716101 3DelMOWin2010_102381311 4JGI11705J14877_100771115 5JGI24003J15210_101016914 6JGI11772J19994_10085597 7Ga0055584_1016855303 8Ga0066223_10268635 9Ga0075478_100872325 10Ga0075462_102351113 11Ga0075503_16220311 12Ga0075515_109767413 13Ga0070749_103595664 14Ga0070749_104021583 15Ga0070749_105406163 16Ga0098045_11552833 17Ga0098036_12608301 18Ga0075110_10996493 19Ga0075460_102314983 20Ga0075463_101412734 21Ga0099847_10965155 22Ga0099850_12225991 23Ga0102963_11905861 24Ga0115545_10243759 25Ga0115553_12540131 26Ga0115560_13104583 27Ga0115568_103448841 28Ga0098043_11713513 29Ga0129342_10671766 30Ga0151671_11172283 31Ga0160423_101575377 32Ga0160423_102489155 33Ga0163110_103527605 34Ga0163110_111319751 35Ga0163180_117948341 36Ga0163111_104051691 37Ga0181412_10566295 38Ga0181390_11619853 39Ga0181383_10272776 40Ga0181417_10495571 41Ga0187222_11385103 42Ga0181433_10211721 43Ga0181393_11840041 44Ga0181392_11026571 45Ga0181411_11909163 46Ga0181425_10922121 47Ga0181430_10943524 48Ga0181581_104949383 49Ga0181587_108936513 50Ga0181600_102206071 51Ga0181601_102901055 52Ga0181553_104072394 53Ga0181563_107019763 54Ga0194024_11034253 55Ga0181570_102034726 56Ga0211526_10703571 57Ga0211659_102209904 58Ga0211539_101212805 59Ga0211576_102128845 60Ga0213859_101971781 61Ga0213864_103652831 62Ga0222717_105166451 63Ga0222718_102487181 64Ga0222718_104475193 65Ga0222716_1001802713 66Ga0222715_106862211 67Ga0222719_103119464 68Ga0222719_103578891 69Ga0222719_105793781 70Ga0222719_105875724 71Ga0212024_10994891 72Ga0196899_11671591 73Ga0222652_10584531 74Ga0255755_10910081 75Ga0255773_101571851 76Ga0255761_102828381 77Ga0208157_10831534 78Ga0209535_12249661 79Ga0209336_100941363 80Ga0209634_11977043 81Ga0209634_12375821 82Ga0209645_10821181 83Ga0209337_11077791 84Ga0208646_10430871 85Ga0208770_10107381 86Ga0208770_10487071 87Ga0208898_10845601 88Ga0209505_10221831 89Ga0209505_11975981 90Ga0208899_11290261 91Ga0208899_11965371 92Ga0208427_10645061 93Ga0208543_11562651 94Ga0209193_10170589 95Ga0208645_11522615 96Ga0209929_10708134 97Ga0307489_104294191 98Ga0307377_103591931 99Ga0315316_105536265 100Ga0348335_194147_1_108 101Ga0348336_170890_3_113 102Ga0348337_141453_1_162
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1DelMOSpr2010_101758531 2JGI11772J19994_10085597 3Ga0075515_109767413 4Ga0115545_10243759 5Ga0098043_11713513 6Ga0163180_117948341 7Ga0255761_102828381 8Ga0208899_11290261 9Ga0348335_194147_1_108
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1DelMOSpr2010_101758531 2JGI11772J19994_10085597 3Ga0075515_109767413 4Ga0115545_10243759 5Ga0098043_11713513 6Ga0163180_117948341 7Ga0255761_102828381 8Ga0208899_11290261 9Ga0348335_194147_1_108
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.24% β-sheet: 0.00% Coil/Unstructured: 54.76%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF11753	DUF3310	13.73
PF13759	2OG-FeII_Oxy_5	0.98

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	13.73 %
Unclassified	root	N/A	86.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	2.94 %
Unclassified	root	N/A	86.27 %
Viruses	superkingdom	All Organisms → Viruses	10.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.94 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %
Unclassified	root	N/A	86.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.94 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %
Unclassified	root	N/A	86.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %
Unclassified	root	N/A	86.27 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.94 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %
Unclassified	root	N/A	86.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.94 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %
Unclassified	root	N/A	86.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.94 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %
Unclassified	root	N/A	86.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %
Unclassified	root	N/A	86.27 %
unclassified Myoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.94 %
Pelagibacter phage HTVC008M	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %
Unclassified	root	N/A	86.27 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10175853	Not Available	707	Open in IMG/M
3300000116\|DelMOSpr2010_c10271610	Not Available	507	Open in IMG/M
3300000117\|DelMOWin2010_c10238131	Not Available	538	Open in IMG/M
3300001419\|JGI11705J14877_10077111	Not Available	1039	Open in IMG/M
3300001460\|JGI24003J15210_10101691	Not Available	821	Open in IMG/M
3300001748\|JGI11772J19994_1008559	All Organisms → Viruses → Predicted Viral	1822	Open in IMG/M
3300004097\|Ga0055584_101685530	Not Available	655	Open in IMG/M
3300004461\|Ga0066223_1026863	Not Available	1188	Open in IMG/M
3300006026\|Ga0075478_10087232	Not Available	1002	Open in IMG/M
3300006027\|Ga0075462_10235111	Not Available	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.02%
Terrestrial	Environmental → Terrestrial	0.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Marine	Environmental → Aquatic → Marine	89.22%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	8.82%
Soil	Environmental → Terrestrial → Soil	0.98%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	0.98%
Coastal	Environmental → Aquatic → Marine → Coastal	27.45%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.78%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	3.92%
Oceanic	Environmental → Aquatic → Marine → Oceanic	16.67%
Pelagic	Environmental → Aquatic → Marine → Pelagic	6.86%
River	Environmental → Aquatic → Freshwater → River	0.98%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	8.82%
Strait	Environmental → Aquatic → Marine → Strait	10.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.75%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	0.98%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.90%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	9.80%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.98%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	27.45%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.75%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	11.76%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	10.78%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	21.57%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	8.82%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.98%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.98%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	10.78%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.92%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.94%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.98%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.98%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	6.86%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.98%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.96%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.98%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	3.92%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.98%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.98%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	0.98%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	9.80%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	10.78%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.96%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.98%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.98%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.98%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	4.90%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001419	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001748	Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006400	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Showing 1 to 10 of 89 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_101758531	3300000116	Marine	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKED
DelMOSpr2010_102716101	3300000116	Marine	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNDEGK
DelMOWin2010_102381311	3300000117	Marine	MSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAFY
JGI11705J14877_100771115	3300001419	Saline Water And Sediment	MSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAFYM
JGI24003J15210_101016914	3300001460	Marine	MSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKEDEAFYME
JGI11772J19994_10085597	3300001748	Saline Water And Sediment	MIDLKMSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAFYME
Ga0055584_1016855303	3300004097	Pelagic Marine	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNEEGKEDEAFYM
Ga0066223_10268635	3300004461	Marine	MSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLHDEGKEDEA
Ga0075478_100872325	3300006026	Aqueous	MIGLKMSNQRPGKKEKKLDRNGDMQVYKFFKTAAKLLNEEGKE
Ga0075462_102351113	3300006027	Aqueous	MSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDE
Ga0075503_16220311	3300006400	Aqueous	MSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKE
Ga0075515_109767413	3300006404	Aqueous	MSNQRPGKLQKPLDRNGDMQVYKFFKTAAMILNDSGKEDEAFYFEQM
Ga0070749_103595664	3300006802	Aqueous	MSNQRPGKKEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEA
Ga0070749_104021583	3300006802	Aqueous	MIGLKMSNQRPGKKEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAFYMEQMVD
Ga0070749_105406163	3300006802	Aqueous	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKEDEAFYME
Ga0098045_11552833	3300006922	Marine	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNEEGKEDEAFYMEQ
Ga0098036_12608301	3300006929	Marine	MSNQRPGKYEKKLDRNGDMQVFKFFKVASEVLKDAGK
Ga0075110_10996493	3300007074	Saline Lake	MSNQRPAKIEKKLDRNGDMQVYKFFKTAAKLLNDEGKEDEAFYMEQMV
Ga0075460_102314983	3300007234	Aqueous	MSNQRPGKKEKKLDRNGDMQVYKFFKTAAKLLNEEKKEDEAFYMEQMVD
Ga0075463_101412734	3300007236	Aqueous	MSNQRPGKLQKPLDRNGDMQVYKFFKTAAMILNDSGKEDEAFYFEQ
Ga0099847_10965155	3300007540	Aqueous	MSNQRPGKVEKELDRNGDMQVYKFFKTAAKLLNEEGKEDEAFYMEQ
Ga0099850_12225991	3300007960	Aqueous	MIGLKMSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNE
Ga0102963_11905861	3300009001	Pond Water	MSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEA
Ga0115545_10243759	3300009433	Pelagic Marine	MSNQRPAKIEKKLDRNGDMQVFKFFKTAQKLLEDSDSHPDAPFYMEQMV
Ga0115553_12540131	3300009445	Pelagic Marine	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKEDEAFY
Ga0115560_13104583	3300009447	Pelagic Marine	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNEEGKEDEAFYMEQMV
Ga0115568_103448841	3300009498	Pelagic Marine	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNEEGKEDEAF
Ga0098043_11713513	3300010148	Marine	MSNQRPGKYEKKLDRNGDMQVFKFFKNAQKVLEDAGKEDEAFYMEQ
Ga0129342_10671766	3300010299	Freshwater To Marine Saline Gradient	MSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLKEEGKEDEAFY
Ga0151671_11172283	3300011253	Marine	MSNQRPGKVEKKLDTNGDMQVYKLFKTAAKLLNEEG
Ga0160423_101575377	3300012920	Surface Seawater	MSNQRPGKVEKKLDRNGDMQVYKFFKTAQKELEDSGYEDASFAFE
Ga0160423_102489155	3300012920	Surface Seawater	MSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEG
Ga0163110_103527605	3300012928	Surface Seawater	MSNQRPGKYEKKLDRNGDMQVFKFFKTAQKVLEDAGKE
Ga0163110_111319751	3300012928	Surface Seawater	MSNQRPGKLQKPLDRNGDMQIFKFFKTASKVLKDAGKEDEAFYFEQMEDY
Ga0163180_117948341	3300012952	Seawater	MTGVYLKMSNQRPGKLQKPLDRNGDMQVYKFFKTAAKVLKD
Ga0163111_104051691	3300012954	Surface Seawater	MSNQRPGKIEKKLDRNGDMQVYKFFKTAQKELEDSGYEDASFAFEQI
Ga0181412_10566295	3300017714	Seawater	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNEECKEDEAFYMEQMVD
Ga0181390_11619853	3300017719	Seawater	MIGLQMSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLN
Ga0181383_10272776	3300017720	Seawater	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNEEGKED
Ga0181417_10495571	3300017730	Seawater	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNEEGKEDEAFYMEQMVD
Ga0187222_11385103	3300017734	Seawater	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKE
Ga0181433_10211721	3300017739	Seawater	MSNQRPGKYEKKLDRNGDMQVFKFFKTAQKILEDAGKEDEAFYM
Ga0181393_11840041	3300017748	Seawater	MSNQRPGKVEKKLDRNGDMQVFKFFKTAAKLLNEEG
Ga0181392_11026571	3300017749	Seawater	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNEE
Ga0181411_11909163	3300017755	Seawater	MSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLNDEG
Ga0181425_10922121	3300017771	Seawater	MTGVYLRMSNQRPGKVEKKLDRNGDMQVYKFFKTA
Ga0181430_10943524	3300017772	Seawater	MTGVYLRMSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLKEEGKED
Ga0181581_104949383	3300017962	Salt Marsh	MIDLKMSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDE
Ga0181587_108936513	3300017968	Salt Marsh	MSNQRPGKKEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAFYMEQM
Ga0181600_102206071	3300018036	Salt Marsh	MSNQRPGKKEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAFYMEQMV
Ga0181601_102901055	3300018041	Salt Marsh	MSNQRPGKLQKPLDRNGDMQVYKFFKTAAMILNDSGK
Ga0181553_104072394	3300018416	Salt Marsh	MSNQRPGKLQKPLDRNGDMQVYKFFKTAAMILNDSGKED
Ga0181563_107019763	3300018420	Salt Marsh	MSNQRPGKIEKKLDRNGDMQVYKFFKTAAKLLNEDGKE
Ga0194024_11034253	3300019765	Freshwater	MSNQRPGKKEKKLDRNGDMQVYKFFKTAAKLLNEEGKE
Ga0181570_102034726	3300020207	Salt Marsh	MSNQRPGKKEKKLDRNGDMQVYKFFKTAAKLLNEDGKEDEAFYMEQMVDY
Ga0211526_10703571	3300020264	Marine	MSNQRPGKIEKKLDRNGDMQVYKFFKTAAKLLNEDGKED
Ga0211659_102209904	3300020404	Marine	MSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAFYMEQ
Ga0211539_101212805	3300020437	Marine	MTGVYLRMSNQRPGKLQKPLDRNGDMQVFKFFKTAAKLLNESG
Ga0211576_102128845	3300020438	Marine	MTGVYLRMSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLKEEGKEDEAFYMEQ
Ga0213859_101971781	3300021364	Seawater	MSNQRPGKLQKPLDRNGDMQVYKFFKTAAMILNDSGKEDEAFYY
Ga0213864_103652831	3300021379	Seawater	MIDLKMSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLL
Ga0222717_105166451	3300021957	Estuarine Water	MSNQRPGKKEKKLDRNGDMQVYKFFKTAAKLLNEEGKED
Ga0222718_102487181	3300021958	Estuarine Water	MSNQRPGKLQKPLDRNGDMQVYKFFKTAAMILNDSGKEDEAFYF
Ga0222718_104475193	3300021958	Estuarine Water	MSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKEDEAF
Ga0222716_1001802713	3300021959	Estuarine Water	MIGLQMSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLKDEGKED
Ga0222715_106862211	3300021960	Estuarine Water	MSNQRPGKIEKKLDRNGDMQVYKFFKTAAKLLNEEGK
Ga0222719_103119464	3300021964	Estuarine Water	MSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAFYMEQMV
Ga0222719_103578891	3300021964	Estuarine Water	MSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAFYMEQM
Ga0222719_105793781	3300021964	Estuarine Water	MSNQRPGKLQKPLDRNGDMQVYKFFKNAAMILNDSGKEDEA
Ga0222719_105875724	3300021964	Estuarine Water	MSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAFYME
Ga0212024_10994891	3300022065	Aqueous	MIDLKMSNQRPGKKEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAF
Ga0196899_11671591	3300022187	Aqueous	MSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGK
Ga0222652_10584531	3300022853	Saline Water	MSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLKDEGKE
Ga0255755_10910081	3300022909	Salt Marsh	MSNQRPGKKEKKLDRNGDMQVYKFFKTAAKLLNEEGK
Ga0255773_101571851	3300022925	Salt Marsh	MSNQRPGKYEKKLDRNGDMQVFKFFKTAQKVLEDAGKEDEAF
Ga0255761_102828381	3300023170	Salt Marsh	MTGVYLRMSNQRPGKLQKPLDRNGDMQVYKFFKTASKVLKDAGKEDEAFYFEQMEDYIKSGK
Ga0208157_10831534	3300025086	Marine	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNEEGKE
Ga0209535_12249661	3300025120	Marine	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKEDEAFYMEQMVD
Ga0209336_100941363	3300025137	Marine	MSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKEDEAFYM
Ga0209634_11977043	3300025138	Marine	MSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKEDEAFY
Ga0209634_12375821	3300025138	Marine	MSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLKDEGKEDEAF
Ga0209645_10821181	3300025151	Marine	MSNQRPGKYEKKLDRNGDMQVFKFFKTAQKVLEDAGKEDEAFYMEQMVD
Ga0209337_11077791	3300025168	Marine	MSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKED
Ga0208646_10430871	3300025425	Saline Lake	MIGLQMSNQRPAKIEKKLDRNGDMQVYKFFKTAAKLLNDEGKEDEA
Ga0208770_10107381	3300025438	Saline Lake	MSNQRPAKIEKKLDRNGDMQVYKFFKTAAKLLNDEGKEDEA
Ga0208770_10487071	3300025438	Saline Lake	MIGLQMSNQRPAKIEKKLDRNGDMQVYKFFKTAAKLLNDEGKEDEAFY
Ga0208898_10845601	3300025671	Aqueous	MSNQRPGKLQKPLDRNGDMQVYKFFKTAAMILNDSGKEDEA
Ga0209505_10221831	3300025690	Pelagic Marine	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNEEGKEDEAFYME
Ga0209505_11975981	3300025690	Pelagic Marine	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKEDEAFYM
Ga0208899_11290261	3300025759	Aqueous	MSNQRPGKLQKPLDRNGDMQVYKFFKTSASLLKRE
Ga0208899_11965371	3300025759	Aqueous	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKEDEAF
Ga0208427_10645061	3300025771	Aqueous	MIDLKMSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAFYMEQMV
Ga0208543_11562651	3300025810	Aqueous	MSNQRPGKLQKPLDRNGDMQVYKFFKTAAMILNDSG
Ga0209193_10170589	3300025816	Pelagic Marine	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNEEGK
Ga0208645_11522615	3300025853	Aqueous	MSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAFYMEQMVD
Ga0209929_10708134	3300026187	Pond Water	MSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKED
Ga0307489_104294191	3300031569	Sackhole Brine	MSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKEDEA
Ga0307377_103591931	3300031673	Soil	MSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLNDEGKEDEAFNNF
Ga0315316_105536265	3300032011	Seawater	MSNQRPGKIEKKLDRNGDMQVFKFFKTAAKLLNDE
Ga0348335_194147_1_108	3300034374	Aqueous	MIDLKMSNQRPGKVEKKLDRNGDMQVYKFFKTAAKL
Ga0348336_170890_3_113	3300034375	Aqueous	MSNQRPAKIEKKLDRNGDMQVFKFFKTAAKLLNDEGK
Ga0348337_141453_1_162	3300034418	Aqueous	MIDLKMSNQRPGKVEKKLDRNGDMQVYKFFKTAAKLLNEEGKEDEAFYMEQMVD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102108

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences