Metagenome / Metatranscriptome Family F102067

Basic Information
Family ID	F102067
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	41 residues
Representative Sequence	VGSASQALVTTDGAGTLGFTSTSTFGISTGKAIAMAMIFG
Number of Associated Samples	89
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (54.902 % of family members)
Environment Ontology (ENVO)	Unclassified (91.176 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (90.196 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.50% β-sheet: 5.00% Coil/Unstructured: 72.50%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13759	2OG-FeII_Oxy_5	0.98
PF13385	Laminin_G_3	0.98

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.02%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.98%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	57.84%
Coastal	Environmental → Aquatic → Marine → Coastal	19.61%
Strait	Environmental → Aquatic → Marine → Strait	10.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.92%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.94%
Inlet	Environmental → Aquatic → Marine → Inlet	1.96%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.98%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.98%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	55.88%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	19.61%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	10.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.94%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.96%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	54.90%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	15.69%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	10.78%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.92%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	2.94%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.94%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.96%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.98%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.98%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.98%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.98%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.98%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.98%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.98%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001718	Marine viral communities from the Pacific Ocean - LP-48	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005404	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009677	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300023296	Saline water microbial communities from Ace Lake, Antarctica - #604	Environmental	Open in IMG/M
3300024052 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_5	Environmental	Open in IMG/M
3300025046	Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)	Environmental	Open in IMG/M
3300025048	Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)	Environmental	Open in IMG/M
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental	Open in IMG/M
3300025071	Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027881 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27	Environmental	Open in IMG/M
3300028125	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031627	Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24006J15134_100506291	3300001450	Marine	AAVGSASQALVTTDGAGTLGFTSTSTFGISTGKAIAMAMIFG*
JGI24003J15210_101671071	3300001460	Marine	SYTVTLPAAVGSASQALVTSDGSGNTQWTSTSSFGITTGKAIAMAIVFG*
JGI24005J15628_102006471	3300001589	Marine	LPAAVGSASQALVTTDGSGTLGFTSTSTFGITTGKAIAMAIVFG*
JGI24523J20078_10348262	3300001718	Marine	VGSASQALVTTDGSGTLGFTSTSSFGISTGKAIAMAIVFG*
JGI25132J35274_10489403	3300002483	Marine	PAAVGSASQALVTTDGSGTLGFTSTSTFGISTGKAIAMAIVFG*
JGI25131J35506_10457752	3300002511	Marine	LPAAVGAAADYALTTSDGSGNTQWTATSTFGITTGKAIAMAMIFG*
JGI25134J35505_100934853	3300002518	Marine	GAAADYALTTSDGSGNTQWTATSTFGITTGKAIAMAIVFG*
Ga0055584_1015501771	3300004097	Pelagic Marine	VGSASQALVTTDGAGTLGFTSTSTFGISTGKAIAMAMIFG*
Ga0066856_102687733	3300005404	Marine	PAAVGSASQALVTSDGSGNTQWTSTSTFGITTGKAIAMAIVFG*
Ga0098035_11679211	3300006738	Marine	DYALTTSDGSGNTQWTATSTFGITTGKAIAMAMIFG*
Ga0098035_13052752	3300006738	Marine	YTLTLPAAVGAAADYALTTSDGSGNTQWTATSTFGITTGKAIAMAMIFG*
Ga0098058_11298051	3300006750	Marine	VGAAADYALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG*
Ga0098048_11560631	3300006752	Marine	ITLPAAVAGGADYALTTTDGAGTTQWTATSTFGISTGKAIAMAMIFG*
Ga0098048_11777541	3300006752	Marine	SQVLVTTDGAGTLGFTSLPSAGISTGKAIAMAIVFG*
Ga0098044_12062821	3300006754	Marine	PAAVGAAADYALTTSDGSGNTQWTATSTFGITTGKAIAMALVFG*
Ga0075475_102518191	3300006874	Aqueous	SASQALVTSDGSGNTQWTSTSTFGITTGKAIAMAIVFG*
Ga0070748_12090881	3300006920	Aqueous	TAVAGAADYALTTTDAAGNTQWVATSTFGISTGKAIAMAIVFG*
Ga0098060_10152465	3300006921	Marine	AAVGSASQALVTTDGAGTLGFTSTSTFGISTGKAIAMAIVFG*
Ga0098053_10591311	3300006923	Marine	YALTTTDGSGNTQWTATSTFGISTGKAIAMAMIFG*
Ga0098053_10754362	3300006923	Marine	VGAAADYALTTSDGSGNTQWTATSTFGITTGKAIAMAMIFG*
Ga0098051_10770961	3300006924	Marine	DAVAGGADYALTTTDGSGNTQWTATSTFGISTGKAIAMAMIFG*
Ga0098050_10453131	3300006925	Marine	AVGAAADYALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG*
Ga0098034_11761782	3300006927	Marine	LPAAVGAAADYALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG*
Ga0098041_12567692	3300006928	Marine	VGSASQALVTTDGAGTLGFTSTSTFGISTGKAIAMAIVFG*
Ga0098046_11324402	3300006990	Marine	AAVAGGADYALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG*
Ga0075468_101952232	3300007229	Aqueous	SQALVTTDGSGTLGFTSTSSFGISTGKAIAMAIVFG*
Ga0075460_100458964	3300007234	Aqueous	PTAVAAGANYALTTTDASGNTQWTATSTFGISTGKAIAMAIVFG*
Ga0075460_102522691	3300007234	Aqueous	VGSASQALVTTDGAGTLGFTSTSSFGITTGKAIAMAMIFG*
Ga0075460_102799681	3300007234	Aqueous	PTAVAAGANYALTTTDASGNTQWTATSTFGISTGKAIAMALVFG*
Ga0070747_11637943	3300007276	Aqueous	YTITLPTAVAGSANFALTTTDGSGNTQWVSTSTFGISTGKAIAMAMIFG*
Ga0099849_12402533	3300007539	Aqueous	QALVTTDGSGTLGFTSTSTFGITTGKAIAMAIVFG*
Ga0099847_11287503	3300007540	Aqueous	VAAGANYALTTTDASGNTQWTDTSTFGISTGKAIAMAIVFG*
Ga0110931_10797123	3300007963	Marine	AAVGSASQALVTSDGSGNTQWTSTSTFGISTGKAIAMAIVFG*
Ga0098052_12232443	3300008050	Marine	YALTTTDGAGTTQWTATSTFGISTGKAIAMAMIFG*
Ga0098052_12560393	3300008050	Marine	DYALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG*
Ga0115551_13687501	3300009193	Pelagic Marine	GSASQALVTTDGAGTLGFTSTSTFGISTGKAIAMAMIFG*
Ga0114994_110796902	3300009420	Marine	TLPAAVGSASQALVTTDGAGTLGFTSTSTFGISTGKAIAMAMIFG*
Ga0115555_14392412	3300009476	Pelagic Marine	ASQALVTSDGSGNTQWTSTSTFGISTGKAIAMAIVFG*
Ga0115567_106425301	3300009508	Pelagic Marine	GSASQALVTSDGSGNTQWTSTSTFGITTGKAIAMAMIFG*
Ga0115011_100837454	3300009593	Marine	ADYALTSTDGSGNTQWTATSTFGISTGKAIAMAMIFG*
Ga0115104_112696181	3300009677	Marine	QALVTTDGAGTLGFTSTSSFGISTGKAIAMAIVFG*
Ga0115001_104182313	3300009785	Marine	LPAAVGASSTALVTTDASGTLGWTATSTFGITTGKAIAMAMIFG*
Ga0098049_11744601	3300010149	Marine	ITLPAAVASGADYALTTSDSAGTMQWTATSTFGISIGKSIAMAMIFG*
Ga0098056_10995061	3300010150	Marine	TLTLPAAVGAAADYALTTTDGSGNTQWTATSTFGISTGKAIAMAIVFG*
Ga0098061_12022891	3300010151	Marine	AAVGSTSQALVTTDGSGTLGFTSTSSFGISTGKAIAMAIVFG*
Ga0098061_12398973	3300010151	Marine	GAAADYALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG*
Ga0098059_12544791	3300010153	Marine	LTLPAAVGAAADYALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG*
Ga0133547_119295031	3300010883	Marine	AVGASSTALVTTDASGTLGWTATSTFGITTGKAIAMAMIFG*
Ga0160422_108193481	3300012919	Seawater	YTLTLPAAVGAAADYALTTSDGSGNTQWTATSTFGISTGKAIAMAIVFG*
Ga0160423_103120791	3300012920	Surface Seawater	AADYALTTSDGSGNTQWTATSTFGITTGKAIAMAIVFG*
Ga0163180_119315491	3300012952	Seawater	PAAVGASSTALVTTDGSGTLGWTATSSFGITTGKAIAMAIVFG*
Ga0181391_10174933	3300017713	Seawater	SQALVTTDGAGTLGFTSTSTFGISTGKAIAMAMVFG
Ga0181375_10465581	3300017718	Marine	VGAAADYALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG
Ga0181390_10787971	3300017719	Seawater	TLPAAVGSASQALVTTDGAGTLGFTSTSTFGITTGKAIAMAIVFG
Ga0181398_10831483	3300017725	Seawater	DYALTTTDGSGNTQWVATSTFGISTGKAIAMAMIFG
Ga0181389_10175893	3300017746	Seawater	ASQALVTTDGAGTLGFTSTSTFGISTGKAIAMAMIFG
Ga0181392_10199261	3300017749	Seawater	SQALVTTDGSGTLGFTSTSSFGISTGKAIAMAIVFG
Ga0181411_10634001	3300017755	Seawater	SQALVTTDGAGTLGFTSTSSFGITTGKAIAMAIVFG
Ga0181409_10573633	3300017758	Seawater	PAAVGSASQALVTTDGAGTLGFTSTSSFGISTGKAIAMAIVFG
Ga0181410_10320821	3300017763	Seawater	ASQALVTTDGAGTLGFTSTSSFGISTGKAIAMAIVFG
Ga0181410_11505083	3300017763	Seawater	ASQALVTTDGAGTLGFTSTSSFGISTGKAIAMAMIFG
Ga0181430_12244461	3300017772	Seawater	EKPAAVGASGTALVTTDASGTLGFTATSTFGITTGKAIAMAMIFG
Ga0181424_100510383	3300017786	Seawater	TLPAAVGSASQALVTSDGSGNTQWTSTSTFGISTGKAIAMAIVFG
Ga0211678_101922611	3300020388	Marine	QVLVTTDGSGTLGFTSTSSFGITTGKAIAMAMIFG
Ga0211577_106525951	3300020469	Marine	QALVTTDGAGTLGFTSTSSFGISTGKAIAMAIVFG
Ga0196899_10774581	3300022187	Aqueous	STGQVIQTDGAGNLSFVTSSGISTGKAIAMAIVFG
Ga0196899_11215073	3300022187	Aqueous	DYALTTTDAAGNTQWVATSTFGISTGKAIAMAIVFG
Ga0196901_11156343	3300022200	Aqueous	AVGSASQALVTTDGSGTLGFTSTSSFGISTGKAIAMAIVFG
Ga0222664_10145484	3300023296	Saline Water	DYALTTTDAAGNTQWVATSTFGITTGKAIAMAMIFG
(restricted) Ga0255050_101718052	3300024052	Seawater	VAGGADYALTSSDGSGNTQWTATSTFGITTGKAIAMAMIFG
Ga0207902_10322483	3300025046	Marine	AADYALTTSDGAGNTQWTATSTFGISTGKAIAMAMIFG
Ga0207905_10121081	3300025048	Marine	PAAVGSASQALVTTDGSGTLGFTSTSSFGISTGKAIAMAIVFG
Ga0207905_10325171	3300025048	Marine	YTMTLPAAVGASGTALVTTDASGTLGFTATSTFGISTGKAIAMAMIFG
Ga0207887_10305301	3300025069	Marine	GAAADYALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG
Ga0207887_10765132	3300025069	Marine	DYALTTSDGAGNTQWTATSTFGISTGKAIAMAMIFG
Ga0207896_10027383	3300025071	Marine	VGSASQALVTTDGSGTLGFTSTSSFGISTGKAIAMAIVFG
Ga0208792_10266621	3300025085	Marine	AVGAAADYALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG
Ga0208011_11113371	3300025096	Marine	AADYALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG
Ga0208434_10363551	3300025098	Marine	GADYALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG
Ga0208669_10801313	3300025099	Marine	TLTLPAAVGSASQALVTTDGAGTLGFTSTSTFGISTGKAIAMAIVFG
Ga0208793_10614973	3300025108	Marine	VAGGADYALTTTDGAGTTQWTATSTFGISTGKAIAMAMIFG
Ga0209644_10225241	3300025125	Marine	YALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG
Ga0208919_12048222	3300025128	Marine	LTLPAAVGSASQALVTTDGAGTLGFTSTSSFGITTGKAIAMAIVFG
Ga0209232_11278943	3300025132	Marine	GSASQALVTTDGAGTLGFTSTSTFGISTGKAIAMAIVFG
Ga0208299_10883861	3300025133	Marine	DYALTTSDGSGNTQWTATSTFGISTGKAIAMAMIFG
Ga0209337_10104031	3300025168	Marine	AAVGSASQALVTTDGAGTLGFTSTSTFGISTGKAIAMAMIFG
Ga0208643_11359371	3300025645	Aqueous	TLPTAVAGSANFALTTTDGSGNTQWVSTSTFGITTGKAIAMAMIFG
Ga0208542_11747881	3300025818	Aqueous	VGSASQALVTTDGAGTLGFTSTSSFGITTGKAIAMAMIFG
Ga0209757_103085401	3300025873	Marine	TITLPAAVGAAADYALTTSDGAGNTQWTATSTFGISTGKAIAMAMIFG
Ga0208644_11013121	3300025889	Aqueous	ANFALTTTDGSGNTQWVATSTFGITTGKAIAMAMIFG
Ga0209710_12535271	3300027687	Marine	SYTITLPTAVAGAADYALTTTDAAGNTQWVATSTFGISTGKAIAMAMIFG
Ga0209192_102063003	3300027752	Marine	AVGASSTALVTTDASGTLGWTATSTFGITTGKAIAMAMIFG
Ga0209502_103635362	3300027780	Marine	TITLPTAVAGAADYALTTTDAAGNTQWVATSTFGISTGKAIAMAMIFG
(restricted) Ga0255055_105048022	3300027881	Seawater	ITLPTAVAGAADYALTTTDAAGNTQWVATSTFGITTGKAIAMAMIFG
Ga0256368_10545461	3300028125	Sea-Ice Brine	LPAAVGSASQALVTTDGSGTLGFTSTSSFGISTGKAIAMAIVFG
Ga0183757_10593333	3300029787	Marine	TALVTTDGSGTLGFTATSTFGITTGKAIAMAIVFG
Ga0307488_100407681	3300031519	Sackhole Brine	AAVGASSTALVTTDASGTLGWTATSTFGITTGKAIAMAMIFG
Ga0307488_100949623	3300031519	Sackhole Brine	VASAADYALTTTDAAGNTQWVATSTFGITTGKAIAMAMIFG
Ga0307488_103938011	3300031519	Sackhole Brine	GVGSASQALVTTDGSGTLGFTSTSSFGISTGKAIAMAIVFG
Ga0302118_105006921	3300031627	Marine	VGASSTALVTTDASGTLGWTATSTFGITTGKAIAMAMIFG
Ga0315315_101206643	3300032073	Seawater	QALVTTDGSGTLGFTSTSSFGITTGKAIAMAIVFG
Ga0348337_163662_3_116	3300034418	Aqueous	ASQALVTTDGAGTLGFTSTSSFGITTGKAIAMAIVFG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102067

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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