Metagenome Family F102024

Overview

Basic Information

• Family ID: F102024
• Family Type: Metagenome
• Number of Sequences: 102
• Average Sequence Length: 45 residues
• Representative Sequence: VNSPEDGPVGPKHVEIRRYMNKIEIVTSVGFSFLMLKRCTVQKA
• Number of Associated Samples: 11
• Number of Associated Scaffolds: 102

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.98 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 7
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (99.020 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut (99.020 % of family members)
• Environment Ontology (ENVO): Unclassified (100.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 45.83%
  β-sheet: 0.00%
  Coil/Unstructured: 54.17%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01359	Transposase_1	0.98
PF10191	COG7	0.98

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
All Organisms	root	All Organisms	0.98 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
cellular organisms	root	All Organisms → cellular organisms	0.98 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.98 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.98 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300028325|Ga0268261_10065011	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3151

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Arthropoda	Host-Associated → Arthropoda	99.02%
Insecta	Host-Associated → Insecta	0.98%

Category

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	99.02%
Digestive System	Host-Associated → Insecta → Digestive System	0.98%

Type

Habitat	Taxonomy	Distribution
Gut	Host-Associated → Arthropoda → Digestive System → Gut	99.02%
Unclassified	Host-Associated → Insecta → Digestive System → Unclassified	0.98%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	99.02%
Unclassified	Host-Associated → Insecta → Digestive System → Unclassified → Unclassified	0.98%

Habitat

Habitat	Taxonomy	Distribution
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	99.02%
Termite Gut	Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Termite Gut	0.98%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001343	Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5	Host-Associated
3300001541	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1	Host-Associated
3300001542	Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C	Host-Associated
3300002238	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1	Host-Associated
3300002308	Nasutitermes corniger P4 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P4	Host-Associated
3300005200	Nasutitermes gut metagenome	Host-Associated
3300027539	Nasutitermes corniger midgut segment microbial community from laboratory colony in Florida, USA - Nc150M (SPAdes)	Host-Associated
3300027670	Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C (SPAdes)	Host-Associated
3300027966	Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5 (SPAdes)	Host-Associated
3300028325	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1 (SPAdes)	Host-Associated
3300028327	Nasutitermes corniger P3 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P3 (SPAdes)	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20172J14457_100296141	3300001343	Termite Gut	TNGCVNSCANSPEDGPVGPKHVEIRRYMSKTEIVTSVGFSFHIQYGHRF*
JGI20169J15301_10134041	3300001541	Termite Gut	SPEDGPVGPKHVEIRRYMNKIETVTSVGFPFLMLKSCTVQKA*
JGI20167J15610_100351471	3300001542	Termite Gut	GPKHVEIRRYMNKIEIVTSVGFSFHMLERCTVQKA*
JGI20167J15610_100949351	3300001542	Termite Gut	GPVGPKHVEIRRYMNKIETVTSVGFSFMLKRCTVQKA*
JGI20169J29049_105566262	3300002238	Termite Gut	VNSCVNSPEDGPVGPKHVEIRRYMNKIEIVTSFVFSFHMY*
JGI20169J29049_105813723	3300002238	Termite Gut	PEDGPVGSKHVEIRRYMNKIEIVTSVGFSFHMLKRCTVQKA*
JGI20169J29049_106014032	3300002238	Termite Gut	PVGPKHVEIRRYMNKIELVTSVDFSFHMLKRCTVQKA*
JGI20169J29049_106331031	3300002238	Termite Gut	NGCVNSCVNSPEDGPVGPKHVEIRRYMNKIEIGTSVSFSFHMFK*
JGI20169J29049_106380441	3300002238	Termite Gut	VPPGTNGCVNSCVNSPEDGPVGPKHVEIRRYIHKIETVTSVGFSFLMLKRCTVQKA*
JGI20169J29049_107059081	3300002238	Termite Gut	PVGPKHVEIRRYMNKIETVTSVGFSFLMLKRCKVQKA*
JGI20169J29049_108336321	3300002238	Termite Gut	VNSCVNSPEDGPVGPKHVEIRRYMNKIEIVTSLGFSFHIFGYLHTIIM*
JGI20169J29049_108340491	3300002238	Termite Gut	CGNSCVNSPEDGPVGPKHVEIRRYMNKIETVTLVGFSFLMLKRCTVQKA*
JGI20169J29049_108503573	3300002238	Termite Gut	GCGNSCVNSPEDGPVGPKHVEIRRYMNGIETVTSVGFSFLKLHSLWHGKK*
JGI20169J29049_108871921	3300002238	Termite Gut	SCVNFPEDGPVGPKHVEIRRYMNKIETVTSVGFSFLMLKRCAVQKA*
JGI20169J29049_108887652	3300002238	Termite Gut	TNGCVNSCVNSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFHMLNLVG*
JGI20169J29049_109139101	3300002238	Termite Gut	PEDGPVGPKHVEIRRYMNKIETVTSVCFSFLMLKRCTVQKA*
JGI20169J29049_109165192	3300002238	Termite Gut	PEDGPVGPKHVEIRRYMNKIETVTSVGFSFLILKRCKVQKA*
JGI20169J29049_109628631	3300002238	Termite Gut	GCVNSCVNSPEDGPVGPKHVEARRYMNKIEIVTSVGFSFHMLK*
JGI20169J29049_109821802	3300002238	Termite Gut	EDGPVGPKHVEIRRYMSKIETVTSVGFSFLMLKRCTVQKA*
JGI20169J29049_110250311	3300002238	Termite Gut	PEDGPVGPKHVEIRRYMNKIETVTSVGFSILMLKRCTVQKA*
JGI20169J29049_111024371	3300002238	Termite Gut	EDGPVGPKHVEIRRYMNKIELVTSVGFSFHMLKRCTVQKA*
JGI20169J29049_111274402	3300002238	Termite Gut	SSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFRMLKRCTVQKA*
JGI20169J29049_111500891	3300002238	Termite Gut	GNSCVNSPEDVPVGPKHVEIRRYMNKIETVTSAGFSFLMLKRCMVQKA*
JGI20169J29049_111881861	3300002238	Termite Gut	PVGPKHVETRRYMNKIETVTSVGFSILMLKRCTVQKA*
JGI20169J29049_112273551	3300002238	Termite Gut	PEDGPVGPKHVETRRYMNKIEIVTSVGFSFHMLERCTVQKA*
JGI20169J29049_112335031	3300002238	Termite Gut	CVNSCVNSPEDGPVGPKHVEIRRYMNKIEIVTFVDFSFHMYS*TV*
JGI20169J29049_112536443	3300002238	Termite Gut	CVNSPEDGPVGPKHVEIRRHMNKIETVTSVGFSFLMLKRRTVQKA*
JGI20169J29049_112638914	3300002238	Termite Gut	CVNSCVNSPEDGPVGPKHVEIRRYMNKIEIVTYVGFSFHMININLLL*
JGI20169J29049_112996491	3300002238	Termite Gut	GPVGPKHVEIRRYMNKIETVTSVGFSFLMLKSCTVQKA*
JGI20169J29049_114091051	3300002238	Termite Gut	PEDGPVGPKHVEIRRYMNKIEIVTSVGFSFHMLKRCTVQKA*
JGI20171J29575_116394392	3300002308	Termite Gut	ETNGCVNSCVNSPEDGPVGPKHVEIRRYMKKTEIVTSVGFSFHIYIYICT*
JGI20171J29575_116921941	3300002308	Termite Gut	GTNGCVNSCVNSPEDGPVGPKHVEIRRYIHKIETVTSVGFSFLMLKRCTVQKA*
JGI20171J29575_117238281	3300002308	Termite Gut	VNSPEDGPVGPKHVEIRRYMNKIELVTSVDFSFHMLKRCTVQKA*
JGI20171J29575_118339502	3300002308	Termite Gut	CVNSCVNSPEDGPVGPKHVEIRRYMNKIEIVTSVGFAFHMFYRL*
JGI20171J29575_118758331	3300002308	Termite Gut	VNSPEDGPVGPKHVEIRRNTNKTETVTSVGFSFLMLKRCTVQKAPKCTLDI*
JGI20171J29575_119196192	3300002308	Termite Gut	NGCVNSCVNSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFLIQYLVSSL*
JGI20171J29575_119217971	3300002308	Termite Gut	DGPVGPKHVEIRRYMNKTETVTSVGFSFLMLKRFTVQKALKNAFYTS*
JGI20171J29575_119980161	3300002308	Termite Gut	CVNSCVNSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFHMLNLVG*
JGI20171J29575_120231801	3300002308	Termite Gut	PEDGPVGPKHVEISQYMNKIELLTSVGISFYMLKRCTVQKA*
JGI20171J29575_120326481	3300002308	Termite Gut	NSCVNFPEDGPVGPKHVEIRRYMNKIETVTSVGFSFLMLKRCAVQKA*
JGI20171J29575_121103421	3300002308	Termite Gut	TNGCGNSCVNSPEDGHVGPKHVEIRRYMNKIETVTSVGFSFLMLKRCTVQKA*
JGI20171J29575_122174341	3300002308	Termite Gut	EDGPVGPKHVEIRRYMNKIETVTSVGFSFRMRKRRTVQKA*
JGI20171J29575_122322331	3300002308	Termite Gut	CVNSPEDGPVGPKHVEIRRYMNKIETVTSGGFSFLMLKRCTVQKA*
JGI20171J29575_122661022	3300002308	Termite Gut	IVPPGTNGCGNSCVSSPEDGPVGPKHVEIRRYMNQIETVTSVGFSFLMLKRCTVQKA*
JGI20171J29575_122767613	3300002308	Termite Gut	YGY*TDGRVNSRVNPPEDGPVGPKHVEIHRYMNKIETVTSVGFSFLMLKRCTVQKA*
JGI20171J29575_122813081	3300002308	Termite Gut	VNSPEDGPVGPKRAEIRRYMNKIETVTSVGFSFLMLKRCTVQK
JGI20171J29575_122850344	3300002308	Termite Gut	NGCGNSCVNSPEDGPVGPKHVEIRRYMNKSEIVTSVGFSLLMLKRCTVQKA*
JGI20171J29575_124309192	3300002308	Termite Gut	SCVNSPEDGPVGPKRVEIRRYINKIETVTSVGFSLLMLKRCTVQKA*
JGI20171J29575_124318843	3300002308	Termite Gut	SCVNSPEDGPVGPKHVEIRRYMNKIEIVTYVGFSFHMININLLL*
Ga0072940_14724581	3300005200	Termite Gut	NSHEDGPVGPKHVGIRRYMDKIERVTSVGFSFLVLKRCTVQKA*
Ga0209424_10661931	3300027539	Termite Gut	DGPVGPKHVEIRRYMNKIETVTSVGFSFRMLKRCTVQKA
Ga0209424_11630111	3300027539	Termite Gut	GPVGPKHVEIRRYMNKIEIVTSVGFSFHMLKRCTVQKA
Ga0209424_12324251	3300027539	Termite Gut	EDGPVGPKRVEIRRYMNKIVIVSSVGFLFHMLKRCT
Ga0209424_12431671	3300027539	Termite Gut	DGPVGPKHVEISQYMNKIELLTSVGISFYMLKRCTVQKA
Ga0209424_13011442	3300027539	Termite Gut	NGCVNSCVNSPEDGPVGPKHVEIRRYVNKIETVTSVGFSFLMLKRCTVQKA
Ga0209424_13315791	3300027539	Termite Gut	NSSEDGPVGPKHVEIQQYTNKIETVTSVGFPFLMLKRCTVQKA
Ga0209423_100209631	3300027670	Termite Gut	CGNSCVNSPEDGPVGPKHVEIRRYMNKIETVTLVGFSFLMLKRCTVQKA
Ga0209423_100592661	3300027670	Termite Gut	VDSCVNSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFLMLKRCTVQKA
Ga0209423_100905781	3300027670	Termite Gut	NSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFMLKRCTVQKA
Ga0209423_101295301	3300027670	Termite Gut	DGPVGPKHVEIQQYTNKIETVTSVGFPFLMLKRCTVQKA
Ga0209423_102089002	3300027670	Termite Gut	EDGLVGPKHVEIRQYMNKIQTVTSVGFSIHMLKRCMVQKA
Ga0209423_102111451	3300027670	Termite Gut	VGPKHVEIRRYMNKIETVTSVGFSFRMLKRCTVQKA
Ga0209423_102278771	3300027670	Termite Gut	NGCVNSCVNSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFHMLNLVG
Ga0209423_102518261	3300027670	Termite Gut	EDGPVGPKHVETRRYMNKIEIVTSVGFSFLMLKRCTVQKALKKKNYSV
Ga0209423_103424921	3300027670	Termite Gut	VNSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFLMLKRCTVQ
Ga0209423_103936591	3300027670	Termite Gut	NGCGDSCVRSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFLMLKRCTVQKSLKFI
Ga0209423_104287781	3300027670	Termite Gut	GPKHVEIRRYMNKIELVTSVDFSFHMLKRCTVQKA
Ga0209423_104434801	3300027670	Termite Gut	DGPVGPKHVEIRQYINKIEIVTSVGFYPICQKGCTVQKA
Ga0209423_106032551	3300027670	Termite Gut	EDGPVGPKHVEILRYMNKIETVTSVGFSFLMQKRCTVQKA
Ga0209738_101184051	3300027966	Termite Gut	NSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFHMLERCTVQKA
Ga0209738_101889781	3300027966	Termite Gut	PEDGPVGPKHVEIRRYMNKIEIVTSVGFSFHMLKRCTVQKA
Ga0209738_101936321	3300027966	Termite Gut	CTNSPEDGPVGPKHVEIQQYTNKIVTSVGFHSMLKRCTVQKA
Ga0209738_102285691	3300027966	Termite Gut	SCVNSPEEWPVGPKHVEIRQYMNKIEIVTSLGFSFHMLKRCTVQKA
Ga0209738_102438121	3300027966	Termite Gut	NSPEDGPVGPKHVEIRRYMNKIEIVTSVGFSFLTLKRCMVQKA
Ga0209738_102671191	3300027966	Termite Gut	VNSPEDGPVGPKHVEIRRYMNKIETVTSVGFSILMLKRCTVQKA
Ga0209738_103238852	3300027966	Termite Gut	SPEDGPVGSKHVEIRRYMNKIEIVTSVGFSFHMLKRCTVQKA
Ga0209738_103389721	3300027966	Termite Gut	SPEDGPVGPKHVEIRRYMNKIETVTSVCFSFLMLKRCTVQKA
Ga0209738_104879181	3300027966	Termite Gut	GCVNSCVNSPEDGPVDPKHVEIRRYMNKIEIVASVGFSFHMLKRCTVQKA
Ga0209738_106156831	3300027966	Termite Gut	NGCVNSCVNSPEDGPVSPKHVETRRYMNKIEIVTSVGFSFHMLKRCTVQNA
Ga0268261_100330851	3300028325	Termite Gut	IGCGNSCVNSPEDGPVGQKHVEIRRYMNKIETVTSVGFSFLMLKRCTVQKA
Ga0268261_100396095	3300028325	Termite Gut	VNSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFLMLKRCTVQKAQNLLDTVFE
Ga0268261_100449375	3300028325	Termite Gut	VNSPEDGPVGPKHVEIRRYMNKIEIVTSVGFSFHTLKRCTVQNV
Ga0268261_100475402	3300028325	Termite Gut	VNSPEDGPVGPKHVEIRRHMNKIETVTSVGFSFLMLKRRTVQKA
Ga0268261_100549252	3300028325	Termite Gut	VNSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFLMLKSCTVQKA
Ga0268261_100650115	3300028325	Termite Gut	NGCVNSCVNSPENGPVGPKRVETRRYMNKIEIVTSVGFSFHMLKRCTVQKA
Ga0268261_100797232	3300028325	Termite Gut	VNSPEDGPVGPKHVEIRRYTNKIEIVTSVGFVIRMLKRCTVQKA
Ga0268261_101714491	3300028325	Termite Gut	TNGCVNSCVNSPEDGPVGPKHVEIRRYMNKIEIVTSVGFSFHMLKRCTVQKA
Ga0268261_102646151	3300028325	Termite Gut	DGPVGPKHVEIRRYMNKIETVTSVGFSFLMLKRCTVQKA
Ga0268261_103996031	3300028325	Termite Gut	EDGPVGPKHVEIRRYMNKIETVTSVGFSFLMLKRCTVQKA
Ga0268261_104219082	3300028325	Termite Gut	VNSRVNPPEDGPVGPKHVEIRRYMNKIETVTSVGFSFLMLKRCTVQKA
Ga0268261_104889671	3300028325	Termite Gut	NGCVNSCVNSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFLM
Ga0268261_105256511	3300028325	Termite Gut	VGPKRAEIRRYMNKIETVTSVGFSFLMLKRCTVQKA
Ga0268261_105376981	3300028325	Termite Gut	GCGNSCVNSPEDGPVGPKHVEISQYMNKIELLTSVGISFYMLKRCTVQKA
Ga0268261_105426871	3300028325	Termite Gut	NGCVNSCVNSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFLMLKRCTVQKA
Ga0268261_105430251	3300028325	Termite Gut	TNGCVNSCVNCPEDGPVGPKHVETRRYMNKIEIVTSVGFSFHMLKRCTVQKA
Ga0268261_105511701	3300028325	Termite Gut	VNSPEDGLVGPKHVEIRRYMNKIEIVTSVGFSFHMLKRCTVQK
Ga0268261_106297901	3300028325	Termite Gut	NGCVNSCVNSPEDGPVGPKHVEIRRYMNKIEIVTSVGFSFHMLKRCTVQKA
Ga0268261_106420311	3300028325	Termite Gut	VNSPEDGPVGPKHVEIRRYMNKIEIVTSVGFSFLMLKRCTVQKA
Ga0268261_106701561	3300028325	Termite Gut	NSPEDGPVGPKHVEIRRYMNKIEIVTSVGFSFHMLKRCTVQKA
Ga0268261_106890961	3300028325	Termite Gut	GCVNSCVNSPEDGPVGPKHVEIRRYMNKIEIGTSVSFSFHMFK
Ga0268261_107116381	3300028325	Termite Gut	NGCVNSCVNSPEDGPVGPKHVEIRRYMNKIETVTSVGFSFLMSVVS
Ga0268262_105457261	3300028327	Termite Gut	QENSPEDGTVGPKHVEIRRYMNKIEAVTSVGFSFLMLKRCTVQKA