Metagenome / Metatranscriptome Family F101979

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101979
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	61 residues
Representative Sequence	MRSNRNYIGPDLSTLTAAIAHSQIVVTSAAAQRFPAGFDDRDVAILQWIAAEGGRAKRSYL
Number of Associated Samples	75
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.27 %
% of genes near scaffold ends (potentially truncated)	25.49 %
% of genes from short scaffolds (< 2000 bps)	82.35 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.863 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.431 % of family members)
Environment Ontology (ENVO)	Unclassified (38.235 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.176 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.19% β-sheet: 0.00% Coil/Unstructured: 52.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF04392	ABC_sub_bind	7.84
PF00293	NUDIX	2.94
PF03734	YkuD	1.96
PF01590	GAF	1.96
PF03401	TctC	0.98
PF00118	Cpn60_TCP1	0.98
PF16640	Big_3_5	0.98
PF07813	LTXXQ	0.98
PF07690	MFS_1	0.98
PF06078	DUF937	0.98
PF04342	DMT_6	0.98
PF00581	Rhodanese	0.98
PF00583	Acetyltransf_1	0.98
PF03466	LysR_substrate	0.98
PF09140	MipZ	0.98
PF05448	AXE1	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	7.84
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.92
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.96
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.96
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	Cell cycle control, cell division, chromosome partitioning [D]	0.98
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.98
COG3169	Uncharacterized membrane protein, DMT/DUF486 family	Function unknown [S]	0.98
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.98
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.98
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.86 %
All Organisms	root	All Organisms	43.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.86 %
cellular organisms	root	All Organisms → cellular organisms	43.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.86 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.35 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.86 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.98 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.98 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.98 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1073720	Not Available	518	Open in IMG/M
3300003505\|JGIcombinedJ51221_10211305	Not Available	787	Open in IMG/M
3300004633\|Ga0066395_10058346	All Organisms → cellular organisms → Bacteria → Proteobacteria	1735	Open in IMG/M
3300005166\|Ga0066674_10399821	Not Available	637	Open in IMG/M
3300005332\|Ga0066388_100229895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2487	Open in IMG/M
3300005332\|Ga0066388_101154432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1318	Open in IMG/M
3300005332\|Ga0066388_101250560	Not Available	1274	Open in IMG/M
3300005332\|Ga0066388_102137486	Not Available	1008	Open in IMG/M
3300005332\|Ga0066388_103106603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	848	Open in IMG/M
3300005435\|Ga0070714_101665240	Not Available	623	Open in IMG/M
3300005436\|Ga0070713_100457258	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300005437\|Ga0070710_10542758	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005764\|Ga0066903_101311143	All Organisms → cellular organisms → Bacteria → Proteobacteria	1353	Open in IMG/M
3300005764\|Ga0066903_107209018	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300006047\|Ga0075024_100435027	Not Available	674	Open in IMG/M
3300006057\|Ga0075026_100107298	Not Available	1393	Open in IMG/M
3300006057\|Ga0075026_100128417	Not Available	1284	Open in IMG/M
3300006057\|Ga0075026_100351095	Not Available	818	Open in IMG/M
3300006059\|Ga0075017_100105809	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1964	Open in IMG/M
3300006086\|Ga0075019_10469535	Not Available	777	Open in IMG/M
3300006162\|Ga0075030_100742810	Not Available	776	Open in IMG/M
3300006162\|Ga0075030_100766559	Not Available	763	Open in IMG/M
3300006163\|Ga0070715_10158871	Not Available	1115	Open in IMG/M
3300006175\|Ga0070712_100052987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2832	Open in IMG/M
3300006175\|Ga0070712_100182392	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300010048\|Ga0126373_10262633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1705	Open in IMG/M
3300010048\|Ga0126373_10637697	Not Available	1120	Open in IMG/M
3300010360\|Ga0126372_10051441	All Organisms → cellular organisms → Bacteria → Proteobacteria	2793	Open in IMG/M
3300010366\|Ga0126379_11582032	Not Available	761	Open in IMG/M
3300010376\|Ga0126381_100428107	All Organisms → cellular organisms → Bacteria → Proteobacteria	1851	Open in IMG/M
3300010376\|Ga0126381_100488260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1735	Open in IMG/M
3300010376\|Ga0126381_100707598	Not Available	1441	Open in IMG/M
3300010376\|Ga0126381_101767731	Not Available	893	Open in IMG/M
3300010376\|Ga0126381_104184709	Not Available	560	Open in IMG/M
3300010863\|Ga0124850_1000764	All Organisms → cellular organisms → Bacteria	7873	Open in IMG/M
3300012210\|Ga0137378_10542957	Not Available	1071	Open in IMG/M
3300012211\|Ga0137377_10228705	Not Available	1787	Open in IMG/M
3300016341\|Ga0182035_12118488	Not Available	511	Open in IMG/M
3300017822\|Ga0187802_10005235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3911	Open in IMG/M
3300017822\|Ga0187802_10010496	All Organisms → cellular organisms → Bacteria	2979	Open in IMG/M
3300017924\|Ga0187820_1113015	Not Available	790	Open in IMG/M
3300017942\|Ga0187808_10127827	Not Available	1113	Open in IMG/M
3300017955\|Ga0187817_10396945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	880	Open in IMG/M
3300017970\|Ga0187783_10329747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1112	Open in IMG/M
3300017994\|Ga0187822_10069292	Not Available	1027	Open in IMG/M
3300020580\|Ga0210403_11096525	Not Available	619	Open in IMG/M
3300020581\|Ga0210399_10176643	Not Available	1772	Open in IMG/M
3300021168\|Ga0210406_10119880	All Organisms → cellular organisms → Bacteria → Proteobacteria	2225	Open in IMG/M
3300021420\|Ga0210394_10604541	Not Available	964	Open in IMG/M
3300021420\|Ga0210394_10801416	Not Available	823	Open in IMG/M
3300021560\|Ga0126371_10054908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3822	Open in IMG/M
3300021560\|Ga0126371_10213495	Not Available	2030	Open in IMG/M
3300021560\|Ga0126371_12037899	Not Available	691	Open in IMG/M
3300021560\|Ga0126371_12091688	Not Available	682	Open in IMG/M
3300021560\|Ga0126371_12687553	Not Available	603	Open in IMG/M
3300021560\|Ga0126371_13576710	Not Available	524	Open in IMG/M
3300022726\|Ga0242654_10339626	Not Available	562	Open in IMG/M
3300025915\|Ga0207693_10069180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2763	Open in IMG/M
3300025915\|Ga0207693_11144578	Not Available	589	Open in IMG/M
3300027090\|Ga0208604_1006289	Not Available	1120	Open in IMG/M
3300027874\|Ga0209465_10060333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1827	Open in IMG/M
3300027898\|Ga0209067_10375382	Not Available	793	Open in IMG/M
3300030730\|Ga0307482_1247672	Not Available	558	Open in IMG/M
3300031122\|Ga0170822_12586864	Not Available	767	Open in IMG/M
3300031128\|Ga0170823_13402331	Not Available	1681	Open in IMG/M
3300031446\|Ga0170820_14972464	All Organisms → cellular organisms → Bacteria → Proteobacteria	1802	Open in IMG/M
3300031446\|Ga0170820_17712907	Not Available	1151	Open in IMG/M
3300031469\|Ga0170819_10511764	Not Available	597	Open in IMG/M
3300031474\|Ga0170818_113837262	Not Available	795	Open in IMG/M
3300031543\|Ga0318516_10296828	Not Available	934	Open in IMG/M
3300031572\|Ga0318515_10045655	All Organisms → cellular organisms → Bacteria → Proteobacteria	2188	Open in IMG/M
3300031679\|Ga0318561_10361035	Not Available	797	Open in IMG/M
3300031682\|Ga0318560_10505664	Not Available	655	Open in IMG/M
3300031719\|Ga0306917_11044776	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300031724\|Ga0318500_10487882	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300031744\|Ga0306918_10000686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15804	Open in IMG/M
3300031753\|Ga0307477_10092106	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300031753\|Ga0307477_10101348	All Organisms → cellular organisms → Bacteria	2002	Open in IMG/M
3300031768\|Ga0318509_10030865	All Organisms → cellular organisms → Bacteria → Proteobacteria	2611	Open in IMG/M
3300031777\|Ga0318543_10272223	Not Available	756	Open in IMG/M
3300031780\|Ga0318508_1075648	All Organisms → cellular organisms → Bacteria → Proteobacteria	916	Open in IMG/M
3300031780\|Ga0318508_1140556	Not Available	683	Open in IMG/M
3300031795\|Ga0318557_10474652	Not Available	575	Open in IMG/M
3300031796\|Ga0318576_10260900	Not Available	818	Open in IMG/M
3300031845\|Ga0318511_10015684	All Organisms → cellular organisms → Bacteria → Proteobacteria	2678	Open in IMG/M
3300031879\|Ga0306919_10766180	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300031910\|Ga0306923_12360726	Not Available	528	Open in IMG/M
3300031947\|Ga0310909_10985270	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300031959\|Ga0318530_10118340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1063	Open in IMG/M
3300031962\|Ga0307479_11123926	Not Available	751	Open in IMG/M
3300031962\|Ga0307479_11885380	Not Available	548	Open in IMG/M
3300031981\|Ga0318531_10028222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2288	Open in IMG/M
3300032035\|Ga0310911_10703991	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300032039\|Ga0318559_10108269	All Organisms → cellular organisms → Bacteria → Proteobacteria	1236	Open in IMG/M
3300032059\|Ga0318533_10418299	Not Available	979	Open in IMG/M
3300032063\|Ga0318504_10632286	Not Available	515	Open in IMG/M
3300032065\|Ga0318513_10579689	Not Available	549	Open in IMG/M
3300032094\|Ga0318540_10160799	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300032094\|Ga0318540_10627173	Not Available	518	Open in IMG/M
3300032180\|Ga0307471_101721062	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300032261\|Ga0306920_100071313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5091	Open in IMG/M
3300033290\|Ga0318519_10161016	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.29%
Aquatic	Environmental → Aquatic	14.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.29%
Sediment	Environmental → Aquatic → Sediment	8.82%
Freshwater	Environmental → Aquatic → Freshwater	5.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.71%
Loam	Environmental → Terrestrial → Soil → Loam	19.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10737202	3300000580	Forest Soil	MRSNRNYTGPDLLTLTAMIAHSQIAVTLAARQRFPGGFDDRDVAILEWIATEGHHAKQSHLH*
JGIcombinedJ51221_102113051	3300003505	Forest Soil	MRSNRNYIGPDLSTLTAAIAHSQIVVTLAVAQRFLPVGFDDQDVAILQWIAAERRHAKRSYL*
Ga0066395_100583465	3300004633	Tropical Forest Soil	MSSNRNYISLDLSTLTVAIAHSQIIVTLAATQRFPAGFDDQDIAVLQWIVAEGHHAKGSRLCT*
Ga0066674_103998212	3300005166	Soil	MKSTKTCIRSDRSTLTVVIAHSQIVVTLAAAQRFPPDFDDRDVAILEWIKAESRYSKRSYFC*
Ga0066388_1002298953	3300005332	Tropical Forest Soil	MRSNGNYIGPDLSTLTAAIAHSQIVVTFVVAQRFLPVGYDDQDVAILQWIAAWRGEHKRVGA*
Ga0066388_1011544321	3300005332	Tropical Forest Soil	IGPDLPTLTAAIAHSQIVVASVAQHFLPVGFDDQDIAILQWIATEGRHAKRSYL*
Ga0066388_1012505603	3300005332	Tropical Forest Soil	MRSNTNHFGPDLSALTAAIAHSQIVVRSAAAQRFPTGFDDRDVAILQWIAAERCRAKQSYFN*
Ga0066388_1021374861	3300005332	Tropical Forest Soil	MKSNRNYTDPDLSTLTAAIAHSQIVVTSAAAERFPAGFDDRDVTILQWIAAEGCRAKRSYLS*
Ga0066388_1031066032	3300005332	Tropical Forest Soil	MRSNRNYIGLDLSTLTAAIAHSQIVVTSAAAERFPAGFDDRDVAILQWIAAEGRAKRSYLS*
Ga0070714_1016652401	3300005435	Agricultural Soil	MGSNRNYIGPDLSTLRAAIAHSQIVVTLAVAQRFLPEGFDDQDVAILQWIAAEGCHAKRSYL*
Ga0070713_1004572582	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MMSNGNYIGPDLSTLTGAIAHSEIVVTLAVAQRFLPEGFDDQDVAILQWIAAEGCHAKRSYL*
Ga0070710_105427582	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRLNRNYVGPDLSTLTAAIAHSQIVVTLAVAQRFLPVGFDDQDVAILQWIAAERRHAKRSHL*
Ga0066903_1013111431	3300005764	Tropical Forest Soil	MRSNRSYISPDLWTLIARITHSQIVAALETAQRFPAGFDDRDVAILQWIAAEGRHAKRSTAV
Ga0066903_1072090182	3300005764	Tropical Forest Soil	MSSNRNYISLDLSTLTVAIAHSQIIVTLAATQRLPAGFDDQDIAVLQWIVAEGHHAKGSRLCT*
Ga0075024_1004350272	3300006047	Watersheds	MSSNRNYIGPDLSTLTAVIAHSQIVVTSAAAQRFPAGFDDRDVAILQWIAAEGGRAKRSYL*
Ga0075026_1001072982	3300006057	Watersheds	MKSTKTCIRPDRSTLTVVIAHSQIVVTLAAAQRFPPDFDDRDVAILEWIKAESRYSKRSYFC*
Ga0075026_1001284172	3300006057	Watersheds	SMRSNRNYIGPDLSTLTAAIAHSQIVVTLAAAQRFPVGFDDQDVAILQWIAAESCHAKRSYL*
Ga0075026_1003510951	3300006057	Watersheds	MRSNRNYIGPDLSTLTAAIAHSQIVVTLAVAQRFLPVGYDDQDVAILQWIAAEGRHAKRSYL*
Ga0075017_1001058093	3300006059	Watersheds	MKSTKTCIRPDRSTLTVVIAHSQIVVTLAAAQRFPPDFDDRDVAILEWIKAESRCSKRSYFC*
Ga0075019_104695351	3300006086	Watersheds	MRSNRNYIGPDLSTLTAAIAHSQIVVTLAAAQRFPVGFDDQEVAILQWIAAESCHAKRSYL*
Ga0075030_1007428101	3300006162	Watersheds	MRSNRNYIGPDLSTLTAAIAHSQIVVTSAAAQRFPAGFDDRDVAILQWIAAEGGRAKRSYL*
Ga0075030_1007665593	3300006162	Watersheds	MKSTKTCIRPDRSTLTVVIAHSQIVVTLAAAQRFPPDFDDRDVAILEWIKAESR
Ga0070715_101588713	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSSNRNYIGRDLSTLTAAIAHSQIVVTSAAAQRFPAGFDDRDVAILQWIAAEGGRAKRSYL*
Ga0070712_1000529876	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LSTLTAAIAHSQIVVTSAAAQRFPAGFDDRDVAILQWIAAEGGRAKRSYL*
Ga0070712_1001823924	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRLNRNYVGPDLSTLTAAIAHSQIVVTLAVAQRFLPVGFDDQDVAILQWIAAERRHAKRSYL*
Ga0126373_102626332	3300010048	Tropical Forest Soil	VISKAEISMRSNKNYDAPDLSALTAAIAHSQIVATLAAAQRFPTGFDGRDVAILRWIAAESCNAKRSYP*
Ga0126373_106376972	3300010048	Tropical Forest Soil	MRSNRNYIDPDLLTFKTTIAHSEIVVTLEAAQRFPAGFDDQDIAVLQWIVA
Ga0126372_100514413	3300010360	Tropical Forest Soil	MSSNRNYISLDLSTLTVAIAHSQIIVTLAATQRFPAGFDDHDIAVLQWIAAEGHHAKDPVFVNT*
Ga0126379_115820322	3300010366	Tropical Forest Soil	MRSNRNYIGLDLSTLTAAIAHSQIVVTSAAAERFPAGFDDRDVAILQWIAAEGR
Ga0126381_1004281073	3300010376	Tropical Forest Soil	MRSNRSYISPDLWTFIARITHSQIVAALETAQRFPAGFDDRDVAILQWIAAEGRHAKRSTAVSTIMHSCPLM*
Ga0126381_1004882602	3300010376	Tropical Forest Soil	VISKAEISMRSKKNYDAPDLSALTATIAHSQIVATLAAAQRFPTGFDGRDVAILRWIAAESCNAKRSYP*
Ga0126381_1007075982	3300010376	Tropical Forest Soil	MRSMRSNRDYIDPDLLTFKTTIAHSEIVVTLEAAQRFPAGFDDQDVAILQWIAAEGCQAKRSYL*
Ga0126381_1017677313	3300010376	Tropical Forest Soil	MRSNGDYSNPNLSTFRAAIAHSQIVVTLEAVQRFPAGFDDRDVAILQWIAAEGCQAKFRPFQ*
Ga0126381_1041847092	3300010376	Tropical Forest Soil	MRSNRDYIDPDLSTFRAAIAHSQIVVTLEAVQRFPAGFDDRDVAILQWIAAEGCQAQI*
Ga0124850_10007646	3300010863	Tropical Forest Soil	MRSNRNYTGPDLLTLTAMIAHSQIAVPSAARQRFPGGFDDPDVAILEWIATEGHHAKQSHLH*
Ga0137378_105429572	3300012210	Vadose Zone Soil	MKSTKTCSRPDRSTLTVVIAHSQIVVTLAAAQRFPPDFDDRDVAILEWIKAESRY
Ga0137377_102287053	3300012211	Vadose Zone Soil	MKSTKTCSRPDRSTLTVVIAHSQIVVTLAAAQRFPPDFDDRDVAILEWIKAESRYSKRSYFC*
Ga0182035_121184882	3300016341	Soil	MRSNRNYIPDLSTLTAAIAHSQIVVTSAAAERFPVGFDDRDVAILQWIAAERCSAKRSY
Ga0187802_100052356	3300017822	Freshwater Sediment	MKSTKTCIRPDRSTLTVVIAHSQIVVTLAAAQRFPPDFDDRDVAILEWIKAESRYSKRSYFC
Ga0187802_100104961	3300017822	Freshwater Sediment	MSSNRNYIGPDLSTLTAAIAHSQIVVTSAAAQRFPAGFDDRDVAILQWIAAEGGRAKRSY
Ga0187820_11130152	3300017924	Freshwater Sediment	MSSNRNYIGPDLSTLTAAIAHSQIVVMSAAAQRFPAGFDDRDVAILQWIAAEGGRAKRSY
Ga0187808_101278272	3300017942	Freshwater Sediment	MKSTKTCIRPDRSTLTVVIAHSQIVVTLAAAQRFPTAFDDRDVAILEWIKAESRYSKRSYFC
Ga0187817_103969453	3300017955	Freshwater Sediment	MKSTKTCIRPDRSTLTVVIAHSQIVVTLAAAQRFPPDFDDRDVAILEWIKA
Ga0187783_103297472	3300017970	Tropical Peatland	MRSNRKYNGPDLSTLTATIGHSQIVATLAAAAQRFPVGFDDRDVAILEWIAVESCNARRSYLFN
Ga0187822_100692921	3300017994	Freshwater Sediment	MSSNRNYIGPDLSTLTAAIAHSQIVVTSAAAQRFPAGFDHRDVAILQWIAAEGRRAKRSY
Ga0210403_110965251	3300020580	Soil	MRLNRNYIGPDLSTLTAAIAHSQIVVTLAVAQRFLPVGFDDQDVAILQWIAAERRHAKRSYL
Ga0210399_101766433	3300020581	Soil	MRSNRNYIGPDLSTLTAAIAHSQIVVTLAVAQRFLPVGFDDQDVAILQWIAAERRHAKRSYL
Ga0210406_101198803	3300021168	Soil	MSSNRNYIGPDLSTLTAAIAHSQIVVTSAAAQRFPTGFDDRDVAILQWIAAEGGRAKRSY
Ga0210394_106045412	3300021420	Soil	MRSNRNYIGPDLSTLTAAIAHSQIVVTFAVAQRFLPVGFDDQDVAILQWIAAERRHAKRSYL
Ga0210394_108014162	3300021420	Soil	MRSNRNYGGPDLSTLTAAIAHSQIVVTLAAAQRFLPEGFDDQDVAILQWIAAQGRHAKRSYL
Ga0126371_100549087	3300021560	Tropical Forest Soil	SMSSNRNYISLDLSTLTVAIAHSQIIVTLAATQRLPAGFDDQDIAVLQWIVAEGHHAKGSRLCT
Ga0126371_102134953	3300021560	Tropical Forest Soil	MRSNKNYDAPDLSALTAAIAHSQIVATLAAAQRFPTGFDGRDVAILRWIAAESCNAKRSY
Ga0126371_120378991	3300021560	Tropical Forest Soil	MKSNRNYIDPDLSTLTAAIAHSQIVVTSAAAERFPAGFDDRDVAILQWIAAEGCRAKRSYLS
Ga0126371_120916883	3300021560	Tropical Forest Soil	QAELYALDLLRETSMGSNRNYINPDLSTLTVTIAHSQITVTLAVAQRFPAGFVVLQWIAAEGHHAKRSHLC
Ga0126371_126875531	3300021560	Tropical Forest Soil	MRSNGDYIDADLSPFTAAIAHSQILVTMEAAQRFPVGFDDRDVAILQWIAAEGFQAKFRPFL
Ga0126371_135767102	3300021560	Tropical Forest Soil	MKSNGNDTDPDLSTLRAAIAHSQIVVTLEAAQRFPAGFDDRDVAILKWIAAKTCHVKRSY
Ga0242654_103396261	3300022726	Soil	MRSNRNYIGPDLSTLTAAIAHSQIVVTLAAAQRFPVGFDDQDVAILQWIAAQGRYAKRSY
Ga0207693_100691801	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSSNRNYIGRDLSTLTAAIAHSQIVVMSAAAQRFPAGFDDRDVAILQWIAAEGGRAKRSY
Ga0207693_111445782	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GNSMRSNRNYIGPDLSTLTAAIAHSQIVVTLAAAQRFPVGFDDQDVAILQWIAAEGCHAKRSYL
Ga0208604_10062893	3300027090	Forest Soil	MRSNRNYIGPDLSTLTAAIAHSQIVVTSAAAQRFPAGFDDRDVATLQWIAAEGRRAKRSY
Ga0209465_100603333	3300027874	Tropical Forest Soil	MSSNRNYISLDLSTLTVAIAHSQIIVTLAATQRFPAGFDDQDIAVLQWIVAEGHHAKGSRLCT
Ga0209067_103753821	3300027898	Watersheds	MKSTKTCIRPDRSTLTVVIAHSQIVVTLAAAQRFPPDFDDRDVAILEWIKAESRCSKRSY
Ga0307482_12476721	3300030730	Hardwood Forest Soil	MRLNRNYIGPDLSTLTAAIAHSQIVVTLAAAQRFPVGFDDQDVAILQWIAAESCHAK
Ga0170822_125868641	3300031122	Forest Soil	MSSNRNYIGPDLSTLTAAIAHSQIVVTSAAAQRFPAGFDDRDVAILQWIAAEGGRAKIFS
Ga0170823_134023313	3300031128	Forest Soil	MKSTKTCSRPDRSTLTVVIAHSQIVVTLAAAQRFPPDFDDRDVAILEWIKAESRYSKRSYFC
Ga0170820_149724643	3300031446	Forest Soil	MKSTKTCIRPDRSTLTVVIAHSQIVVTLAAAQRFPPDFDDRDVAILEWIKAESRYSKRSYFCF
Ga0170820_177129071	3300031446	Forest Soil	MSSNRNYIGPDFSTLTAAIAHSQIVVTSAAAQRFPAGFDDRDVAILQWIAAEGGRAKRSY
Ga0170819_105117641	3300031469	Forest Soil	MKSTKTCSRPDRSTLTVVIAHSQIVVTLAAAQRFPPDFDDRDAAILEWIKAESRYSKRSYFC
Ga0170818_1138372622	3300031474	Forest Soil	MKSTKTCIRPDRSTLTVVIAHSQIVVTLAAAQRFPPDFDDRDVAILEWIKAESRYSKRSYFCNS
Ga0318516_102968282	3300031543	Soil	MKSNRNYTDPDLSTLTAAIAHSQIVVTSAAAERFPAGFDDRDVTILQWIAAEGCRAKRSYLS
Ga0318515_100456556	3300031572	Soil	MRSNRNYTGPDLLTLTTMIAHSQIAVTLAAGQRFPGGFDDRDVAILEWIATEGHHAKQSHLH
Ga0318561_103610352	3300031679	Soil	MKSNRNYIDLDLSTLTAAIAHSQIVVTSAAAERFPAGLDDRDVTILQWIAAEGCRAKRSYLS
Ga0318560_105056641	3300031682	Soil	MKSNRNYIDPDLSTLTAAIAHSQIVVTSAAAERFPAGFDDRDVTILQWIAAEGCRAKRSYLS
Ga0306917_110447762	3300031719	Soil	MRSNRNCISPDLSTLRGTIVHSQIIVTLAAAQHFPTGFDDQDIAVLQWIAAEGHHAKRRR
Ga0318500_104878821	3300031724	Soil	MRSNRNYTGPDLLTLTAMIAHSQIAVTLAAGQRFPGGFDDRDVAILEWIATEGHHAKQSHLH
Ga0306918_100006869	3300031744	Soil	MQAELYALDLLRETSMGSNRNYINPDLSTLTVTIAHSQITVTLAVAQRFPAGFVVLQWIAAEGHHAKRSHLC
Ga0307477_100921062	3300031753	Hardwood Forest Soil	MRLNRNYIGHDLSTLTAAIAHSQIVVTLAVAQRFLPVGFDDQDVAILQWIAAERRHAKRSYL
Ga0307477_101013482	3300031753	Hardwood Forest Soil	MSSNRNYIGSDLSTLTAAIAHSQIVVTSAAAQRFPAGFDDRDVAILQWIAAEGGRAKRSY
Ga0318509_100308655	3300031768	Soil	MGSNRNYINPDLSTLTVTIAHSQITVTLAVAQRFPAGFVVLQWIAAEGHHAKRSHLC
Ga0318543_102722233	3300031777	Soil	KSRFMQAELYALDLLRETSMGSNRNYINPDLSTLTVTIAHSQITVTLAVAQRFPAGFVVLQWIAAEGHHAKRSHLC
Ga0318508_10756483	3300031780	Soil	MRSNRNYTGPDLLTLTAMIAHSQIAVTLAARQRFPGGFDDRDVAILEWIATEGHHAKQSHLQSLPTK
Ga0318508_11405561	3300031780	Soil	MKSNRNYTDPDLSTLTAAIAHSQIVVTSAAAERFPAGFDDRDVTILQWIAAE
Ga0318557_104746522	3300031795	Soil	MKSNRNYTDPDLLTLTAAIAHSQIVVTSAAAERFPAGFDDRDVTILQWIAAEGCRAKRSYLS
Ga0318576_102609001	3300031796	Soil	MKSNRNYIDPDLSTLTAAIAHSQIVVTSAAAERFPAGFDDRDVAILQWIAAEGCRAKRPYLS
Ga0318511_100156845	3300031845	Soil	MRSNRNYTGPDLLTLTAMIAHSQIAVTSAARQRFPGGFDDRDVAILEWIATEGHHAKQSHLH
Ga0306919_107661801	3300031879	Soil	MRSNRNCISPDLSTLRGTIVHSQIIVTLAAAQHFPTGFDDQDIAVLQWIA
Ga0306923_123607261	3300031910	Soil	MRSNRNYTGPDLLTLTAMIAHSQIAVTLAARQRFPGGFDDRDVAILEWIATEGHHAKQSHPH
Ga0310909_109852702	3300031947	Soil	MKSNRKYIDPDLSTLTAAIAHSQIVVTSAAAERFPAGFDDRDVAILQWIAAEGCRAKRSYLS
Ga0318530_101183403	3300031959	Soil	MKSNRNYIGPDLSTLTAAIAHSQIVVTSAAAERFPAGFDDRDVTILQWIAAEGCRAKRSYLS
Ga0307479_111239261	3300031962	Hardwood Forest Soil	MRSNRNYIGPNLSTLTAAIAHSQIVVTLAVAQRFLPVGFDDQDVAILQWIAAERRHAKRSYL
Ga0307479_118853801	3300031962	Hardwood Forest Soil	MRSNRNYIGPDLSTLTTAIAHSQIVVTLAVAQRFLPVGFDDQDVAILQWIAAERRHAK
Ga0318531_100282225	3300031981	Soil	MGSNRNYINPDLSTLTVTIAHSQITVTLAVAQRFPAGFDDQDIVVLQWIAAEGHHA
Ga0310911_107039911	3300032035	Soil	MRSNRNCISPDLSTLRGTIVHSQIIVTLAAAQRFPAGFDDQDIAVLQWIAAEGHHAK
Ga0318559_101082693	3300032039	Soil	MRSNRNYTGPDLLTLTTMIAHSQIAVTLAARQRFPGGFDDRDVAILEWIATEGHHAKQSHLH
Ga0318533_104182991	3300032059	Soil	MKSNRNYTDPDLSTLTAAIAHSQIVVTSAAAERFPAGFDDRDVTILQWIAAEGCGAKRSYLS
Ga0318504_106322861	3300032063	Soil	MKSNRNYTDPDLSTLTAAIAHSQIVVTSAAAERFPAGFDDRDVAILQWIAAEGCRAKRSYLS
Ga0318513_105796891	3300032065	Soil	VSKSRFMQAELYALDLLRETSMGSNRNYINPDLSTLTVTIAHSQITVTLAVAQRFPAGFVVLQWIAAEGHHAKRSHLC
Ga0318540_101607991	3300032094	Soil	CFAENSMRSNRNYTGPDLLTLTAMIAHSQIAVTLAARQRFPGGFDDRDVAILEWIATEGHHAKQSHLH
Ga0318540_106271731	3300032094	Soil	MKSNRNYTDPDLSTLTAAIAHSQIVVTSAAAERFPAGFDDRDVAILQWIAAEGCRAKRSY
Ga0307471_1017210622	3300032180	Hardwood Forest Soil	MRSNRNYIGPDHSTLTAAIAHSQIVVTLAAAQRFPVGFDDQDVAILQWIAAAGCHVKRSY
Ga0306920_1000713136	3300032261	Soil	MRSNRNCISPDLSTLRGTIVHSQIIVTLAAAQHFPTGFDDQDIAVLQWIAAEGHHAKRRRLC
Ga0318519_101610161	3300033290	Soil	MRSNRNYTGPDLLTLTTMIAHSQIAVTLAAGQRFPGGFDDRDVAILEWIATEGH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101979

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences