Metagenome Family F101950

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101950
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	68 residues
Representative Sequence	NHALATGFGRGFLVAAGIALLTLIINVAVIRVRRADLAGAQQPEPAAPAHPAQPAVTAKDTNDRRDPDDNSRI
Number of Associated Samples	75
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	56.86 %
% of genes from short scaffolds (< 2000 bps)	54.90 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.922 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (32.353 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.980 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 37.62% β-sheet: 0.00% Coil/Unstructured: 62.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF03779	SPW	45.10
PF07690	MFS_1	6.86
PF11239	DUF3040	3.92
PF00106	adh_short	1.96
PF14378	PAP2_3	1.96
PF07883	Cupin_2	0.98
PF01242	PTPS	0.98
PF13649	Methyltransf_25	0.98
PF00479	G6PD_N	0.98
PF08327	AHSA1	0.98
PF12681	Glyoxalase_2	0.98
PF00300	His_Phos_1	0.98
PF00753	Lactamase_B	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	0.98
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
All Organisms	root	All Organisms	46.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
cellular organisms	root	All Organisms → cellular organisms	46.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.29 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.31 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	22.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.76 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	22.55 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	5.88 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	22.55 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5.88 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.98 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	22.55 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	5.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.98 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	22.55 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	5.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.98 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	22.55 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	5.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.98 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_106626140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	584	Open in IMG/M
3300005434\|Ga0070709_10925389	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005435\|Ga0070714_100887563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	865	Open in IMG/M
3300005437\|Ga0070710_10381352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	940	Open in IMG/M
3300005437\|Ga0070710_10939385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	626	Open in IMG/M
3300005440\|Ga0070705_100320503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1119	Open in IMG/M
3300005467\|Ga0070706_101485478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	619	Open in IMG/M
3300005468\|Ga0070707_100290895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1587	Open in IMG/M
3300005471\|Ga0070698_101030483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300005471\|Ga0070698_101265495	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300006028\|Ga0070717_11794160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	554	Open in IMG/M
3300006175\|Ga0070712_101870866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	525	Open in IMG/M
3300009038\|Ga0099829_11031497	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	682	Open in IMG/M
3300009089\|Ga0099828_11025675	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	734	Open in IMG/M
3300009162\|Ga0075423_11977754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	631	Open in IMG/M
3300010359\|Ga0126376_12090765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	610	Open in IMG/M
3300010362\|Ga0126377_10681525	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300010366\|Ga0126379_12586722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	605	Open in IMG/M
3300010396\|Ga0134126_11442404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	760	Open in IMG/M
3300011271\|Ga0137393_11150583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	659	Open in IMG/M
3300012096\|Ga0137389_10535172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1006	Open in IMG/M
3300012096\|Ga0137389_11216396	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	645	Open in IMG/M
3300012189\|Ga0137388_12029015	All Organisms → cellular organisms → Bacteria → Terrabacteria group	503	Open in IMG/M
3300012356\|Ga0137371_10124126	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300012363\|Ga0137390_11383916	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	648	Open in IMG/M
3300012363\|Ga0137390_11673942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	572	Open in IMG/M
3300012923\|Ga0137359_11368944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300020579\|Ga0210407_10838575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	707	Open in IMG/M
3300020581\|Ga0210399_10210588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1618	Open in IMG/M
3300021088\|Ga0210404_10393891	Not Available	773	Open in IMG/M
3300021171\|Ga0210405_10949810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	651	Open in IMG/M
3300021178\|Ga0210408_10162974	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300021178\|Ga0210408_10931511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	675	Open in IMG/M
3300021178\|Ga0210408_10968653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	659	Open in IMG/M
3300021559\|Ga0210409_11318378	Not Available	598	Open in IMG/M
3300025905\|Ga0207685_10557986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	610	Open in IMG/M
3300025910\|Ga0207684_10017818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6090	Open in IMG/M
3300025915\|Ga0207693_10524209	Not Available	924	Open in IMG/M
3300025915\|Ga0207693_10763624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	746	Open in IMG/M
3300025922\|Ga0207646_11040257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	722	Open in IMG/M
3300025922\|Ga0207646_11235383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	654	Open in IMG/M
3300025928\|Ga0207700_11225487	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	669	Open in IMG/M
3300025939\|Ga0207665_10722056	Not Available	784	Open in IMG/M
3300026805\|Ga0207507_100200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1211	Open in IMG/M
3300027874\|Ga0209465_10541918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	579	Open in IMG/M
3300031681\|Ga0318572_10459928	Not Available	758	Open in IMG/M
3300031713\|Ga0318496_10510537	Not Available	664	Open in IMG/M
3300031753\|Ga0307477_10942105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	568	Open in IMG/M
3300031771\|Ga0318546_11186095	Not Available	536	Open in IMG/M
3300031794\|Ga0318503_10212558	Not Available	627	Open in IMG/M
3300031819\|Ga0318568_10836383	Not Available	570	Open in IMG/M
3300031820\|Ga0307473_11226109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	558	Open in IMG/M
3300031897\|Ga0318520_10189653	Not Available	1208	Open in IMG/M
3300031954\|Ga0306926_12209362	Not Available	612	Open in IMG/M
3300031981\|Ga0318531_10338533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	680	Open in IMG/M
3300032001\|Ga0306922_11182097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	779	Open in IMG/M
3300032180\|Ga0307471_102095059	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	711	Open in IMG/M
3300032180\|Ga0307471_103315332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	570	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.08%
Host-Associated	Host-Associated	3.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.08%
Plants	Host-Associated → Plants	3.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.75%
Loam	Environmental → Terrestrial → Soil → Loam	33.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	31.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	29.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.98%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026805	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK01-A (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_05196840	2170459005	Grass Soil	VAAGIALLTLAINTAVIRVRRADLAGTQQPLPAVAAEPAQPAVTAKDTNDTRDPR
2222067450	2209111022	Grass Soil	TLAINIAVIRVRRADLAGAQQPVPAEPAQPAVTAKDTDDRRDPDDNPASKPG
JGI10216J12902_1049435801	3300000956	Soil	GFLVAAGIALLTLIINFAVIRIRRADLAGAQQPEPAAPANPAQPAVTAKDTNDGRDPDDNSRI*
Ga0066388_1066261401	3300005332	Tropical Forest Soil	AIYSHALATGFARGFLAAAAIALLTLIINFAMIRVRRADLAGTQQPPPAAPADPAQPAVTAKNTNDSEDPDDNSGS*
Ga0070709_109253892	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GFGRGFLVAAGIALLTLIINFAVIRVRRADLAGAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS*
Ga0070714_1001173564	3300005435	Agricultural Soil	INIAVIRVRRADLAAAQQPAPTMPADPAPPAVTAKDTNDRRDPDDNSRI*
Ga0070714_1008875632	3300005435	Agricultural Soil	LASGFGRGFLVAAGIALLTLIINFAVIRVRRADLAGAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS*
Ga0070710_103813521	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LAAAIYNHALASGFGRGFLVAAGIALLTLIINFAVIRVRRADLAGAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS*
Ga0070710_109393852	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GGPLAAAIYSHALATGFARGFLVAAGIALLTLIINFAVIRVRRADLAGTQQPISAVATEPAQPGGQQPKDTADRTDLR*
Ga0070705_1003205033	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	HALATGFGRGFLVAAGIALLTLIINSAVIRVRRADLAAAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS*
Ga0070706_1000529531	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LLTLIINLAVIRVRRADLAGTQPPEPAAPADPAQPAVTAKDTNDRTDPR*
Ga0070706_1002868494	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AAGIALLTLIINLAVIRVRRADLAAAQPPGPAAPTHPAQPAVTAKDTNDRGDSDDNSRI*
Ga0070706_1012808851	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RAFLVAAGIALLTLIINIAVIRVRRADLAGTQQPEPAAPADPAQPAVTAKDTNGRRDPDDNSRI*
Ga0070706_1014854782	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	YNHALATGFGRGFLVAAGIALLTLIINLAVIRVRRADLAGAQQPEPAPPAHPAQPAVTAKDTHDSADPDGNSRS*
Ga0070707_1002908951	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	HALATGFGRGFLVAAGIALLTLIINLAVIRVRRADLAAAQPPGPAAPTHPAQPAVTAKDTNDRGDSDDNSRI*
Ga0070698_1010304831	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AIYNHALATGFARGFLVAAGIALLTLIINLAVIRVRRADLAGAQQPEPAAPAHPAQPAVTAKDTNDSADPDGNSRS*
Ga0070698_1012654952	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LATGFGRGFLVAAGIALLTLIINIAVIRVRRADLAGAQQPEPAAPADPAQPAVTAKDTNARKDPR*
Ga0070697_1002584651	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LTLIINLAVIRVRRADLAAAQPPGPAAPTHPAQPAVTAKDTNDRGDSDDNSRI*
Ga0070717_100171047	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FLVAAGIALLTLAINLAVIRVRRADLAGAQQPEPAPLAQPAQPPVTAKTQTIGETPTTTPASEPG*
Ga0070717_112879652	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AGIALLTLIINFAVIRVRRADLAGAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS*
Ga0070717_117941602	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VRPGGPLAAAIYNHALATGFARGFLVAAGIALLTLIINIAVIRVRRADLAGAQQPEPAAPAHPAQPAVTAQDTNDRRDPDDNSRI*
Ga0070715_105447901	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	AAGIALLTLIINIAVIRVRRADLAAAQQPAPTMPADPAPPAVTAKDTNDRRDPDDNSRI*
Ga0070712_1009629061	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AAGIALLTLAINIAVIRVRRADLAGAQQPVPAAPAQPAQPEVTAKDTNDRRDPPMTTPASKPG*
Ga0070712_1018708661	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AIYNHALATGFARGFLVAAGIALLTLIINITAIRVRRADLAGTQQPEPAAPAHPAQPAVTAKDTNDSADPDGNSRS*
Ga0099829_110314971	3300009038	Vadose Zone Soil	GPLAAAIYNHALATGFGRGFLVAAGIALLTLIINIAVIRVRRADLAAAQQPEPAAPAHPAPPAVTAKDTNDRRDPDDNSRI*
Ga0099830_113267971	3300009088	Vadose Zone Soil	LTLIINLAVIRVRRADLAGTQQPVPTEPTQPAQPAVTAKDTNDRRDPDDNSRI*
Ga0099828_110256751	3300009089	Vadose Zone Soil	NHALATGFGRGFLVAAGIALLTLIINVAVIRVRRADLAGAQQPEPAAPAHPAQPAVTAKDTNDRRDPDDNSRI*
Ga0075423_119777541	3300009162	Populus Rhizosphere	TAAYHHALATGFGRAFLVAAGIALLTLALNIAVIRVRRADLAGAQQPGPAAPAQPAQPEVTAKNTND*
Ga0126370_117013761	3300010358	Tropical Forest Soil	AIALLTLAINTATIRIRRADLAGNQQPVPAAPADPAPPAVTAKDTNHRGDPDDNSRS*
Ga0126376_120907651	3300010359	Tropical Forest Soil	RAGHPPRPGGPLAAAIYNHALATGFARAFLVAAGIALLTLIINSAVIRIRRADLAGARQPEPAPPADPAQPAVTAKDTNDSKDPDDNSGS*
Ga0126377_106815251	3300010362	Tropical Forest Soil	ARAGHPVNPRGPLAGAIYSHALATGFGRGFLVAAGIALLTLAVNIAAIRVRRADLAGAQQPVSATPAEPAQTWRSRQKDTPDRRGPR*
Ga0126379_125867221	3300010366	Tropical Forest Soil	GFARAFLVAAGIALLTLAINFVVIRVRRADLAGAEPPALAAPADPAQPAVTEKDINDSKDPDDNSGS*
Ga0134126_114424042	3300010396	Terrestrial Soil	PLAAAIYNHALASGFGRGFLVAAGIALLTLIINFAVIRVRRADLAGAEPPTPAAPADPAQPAVTAKDTNDSKDPDDNSGS*
Ga0137393_111505832	3300011271	Vadose Zone Soil	AGHPAHPGGPPAAAIYNHALATGFGRGFLVAAGIALLTLIINVAVIRVRRADLAAAQQPEPAPPAHPAQPAVTAKDTNDRRDPDDNSRI*
Ga0137389_105351721	3300012096	Vadose Zone Soil	PAHPGGPVAAAIYNHALATGFGRGFLVAAGIALLTLIINLAVIRVRRADLAGAQPPAPADPAVTAKDTNDSKDPDDNSGS*
Ga0137389_112163962	3300012096	Vadose Zone Soil	YNHALATGFGRGFLVAAGIALLTLIINVAVIRVRRADLAGAQQPEPAAPAHPAQPAVTAKDTNDRRDPDDNSRI*
Ga0137388_120290151	3300012189	Vadose Zone Soil	GPVAAAIYNHALATGFGRGFLVAAGIALLTLIINLAVIRVRRADLAAAQQPEPAPPAHPAQPAVTAKDTNDRRDPDDNSRI*
Ga0137377_114273242	3300012211	Vadose Zone Soil	AAGIALLTLAINIAAIRVRRADLTGAQQPVPAAPAQPAVTAKDTTDRRDPR*
Ga0137371_101241266	3300012356	Vadose Zone Soil	HALATGFGRGFLVAAAIALLTLAINLAVIRVRRADLAGAQQPVPAAPAQPAQPAVTAKTQTIGDPDDNSRI*
Ga0137385_116622502	3300012359	Vadose Zone Soil	FLVAAGIALLTLIINAAVIRVRRADLAGAQQPEPAAPAHPAQPAVTAKDTNHRGDPDDNSRS*
Ga0137390_109893011	3300012363	Vadose Zone Soil	AGIALLTLIINLAVIRVRRADLAAAQQPEPAPPAHPAQPAVTAKDTNDRRDPDDNSRI*
Ga0137390_113839162	3300012363	Vadose Zone Soil	IYNHALATGFGRGFLVAAGIALLTLIINVAVIRVRRADLAGAQQPEPAAPAHPAQPAVTAKDTNDRRDPDDNSRI*
Ga0137390_116739422	3300012363	Vadose Zone Soil	AIYSHALASGFGRGFLVAAGIALLTLAINIAVIRVRRADLAGAQQPVPAEPAQPAVTAKDTNDRRDPDDNPASKPG*
Ga0137359_113689442	3300012923	Vadose Zone Soil	ALATGFGRGFLVAAGIALLTLAINIAVIRVRRADLTGAQQPVPAAPAQPAVTAKDTTDRRDPR*
Ga0157370_102487841	3300013104	Corn Rhizosphere	GIALLTLIINSAVIRVRRADLAAAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS*
Ga0157379_104027981	3300014968	Switchgrass Rhizosphere	LIINFAVIRVRRADLAGAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS*
Ga0182039_115883271	3300016422	Soil	LIINTAVIRIRRADLAGAQQPEPAAPAHPAQPAVTAQDTNDGTDPDDSSRS
Ga0210407_108385752	3300020579	Soil	IYNHALATGFGRGFLVAAGIALLTLIINSAVIRVRRADLAAAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS
Ga0210403_113068031	3300020580	Soil	LVAAGIALLTLIINLALIRVRRADLAGAQQPEPAAPAHPAQPAVTAQDTNDRKDPDDNSR
Ga0210403_114939671	3300020580	Soil	GFLVAAGIALLTLIINLAAIRVRRADLAAAQPPEPAAPAHPAQPAATPAQDTNDRTDPR
Ga0210399_102105884	3300020581	Soil	AHAAHAAQAGHPVHPGGPLAAAIYNHALATGFGRGFLVAAGIALLTLIINIAVIRVRRADLAGTQQPIPAVATEPAQPGGQQPKDTADRTDLR
Ga0210399_108186791	3300020581	Soil	ARGFLVAAGIALLTLIINLAAIRARRADLAAAQQPEPAAPTHQAQPAATPAQDTNDRTDP
Ga0210399_108410172	3300020581	Soil	LLTLIINTAVIRVRRADLAAAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS
Ga0179596_104659181	3300021086	Vadose Zone Soil	ALLTLIINIAVIRVRRADLAAAQQPEPAAPAHPAPPAVTAKDTNDRRDPDDNSRI
Ga0210404_102002731	3300021088	Soil	GFARAFLAAAGIALLTLIINLAVIRVRRADLAAAQQPEPAAPTHPAPPAATPAQDTNDRTDPR
Ga0210404_103938911	3300021088	Soil	LATGFGRGFLVAAGIALLTLIINSAVIRVRRADLAAAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS
Ga0210405_109498102	3300021171	Soil	AAIYNHALATGFARGFLVAAGIALLTLIINLAAIRVRRADLAAAQQPEPAAPTHQAQPAATPAQDTNDRTDPR
Ga0210405_112300351	3300021171	Soil	LIINLAVIRVRRADLAGAQQPEPAAPAHPAQPAVTAKDTNDSADPEGNSRS
Ga0210408_101629741	3300021178	Soil	AAAAIYNHALATGFGRGFLVAAAIALLTLIINIAVIRIRRADLAAAQQPEPPAPTHPAQPAATPAQDTNDRTDPR
Ga0210408_109315112	3300021178	Soil	HPPRPGGPLAAAIYDHALATGFGRGFLVAAGIAVLTLIINFAMIRVRRADLAGAQQLEPAAPADPAQPAVTAEDTNDSRDPDDNSASKPG
Ga0210408_109686531	3300021178	Soil	ATGFARGFLVAAGIALLTLIINLALIRVRRADLAGAQQPEPAAPADPAPPAVTAKDTNDGRDPDDNSRI
Ga0210409_113183781	3300021559	Soil	TGFARGFLVAAGIALLTLIINTAAIRVRRADLAAAQPPEPAAPAHPAQPAATPAQDTNDRTDPR
Ga0207692_109850892	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GFLVAAGIALLTLIINFAVIRVRRADLAGAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS
Ga0207685_105579861	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	PAHLGGPLAAAIYNHALATGFARGFLVAAGIALLTLIINIAVIRVRRADLAGAQQPVPAAPADPAPPAVTAKDTNDRRDPDDNSRI
Ga0207684_100178181	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	HALATGFGRGFLVAAGIALLTLIINLAVIRVRRADLAAAQPPGPAAPTHPAQPAVTAKDTNDRGDSDDNSRI
Ga0207684_107382371	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RAFLVAAGIALLTLIINIAVIRVRRADLAGTQQPEPAAPADPAQPAVTAKDTNGRRDPDDNSRI
Ga0207684_111811902	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LVAAGIALLTLIINLAVIRVRRADLAGTQQPEPAAPAHPAQPAVTAQDTNDRRDPDDNSR
Ga0207693_105242091	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PLAAAIYNHALATGFGRAFLVAAGIALLTLIINIAVIRIRRADLAAAQQPAPTMPADPAPPAVTAKDTNDRRDPDDNSRI
Ga0207693_107636242	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PLAAAIYNHALATGFARGFLVAAGIALLTLIINVAVIRVRRADLAGTQPPEPAAPADPAQPAVTAKDTNDRTDPR
Ga0207646_107251291	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GIALLTLAINLAVIRVRRADLAGAQQPEPAAPAHPAQPAVTAKDTNDGRDPDDNSRI
Ga0207646_110402572	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AIYNHALATGFARGFLVAAGIALLTLIINTAAIRVRRADLAGTQQPEPAAPAHPAPPAVTAKDTNDSADPDGNSRS
Ga0207646_112353831	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GGPLAAAIYNHALATGFARGFLVAAGIALLTLIINLAVIRVRRADLAGTQPPEPAAPADPAQPAVTAKDTNDRKDPR
Ga0207700_112254871	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	YNHALATGFGRGFLVAAGIALLTLIINLAVIRVRRADLAAAQPPGPAAPTHPAQPAVTAKDTNDRGDSDDNSRI
Ga0207665_107220561	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	PGRPAGRSHLHPRLATGFGRAFLVAAGIALLTLIINIAVIRIRRADLAAAQQPAPTMPADPAPPAVTAKDTNDRRDPDDNSRI
Ga0207711_110278112	3300025941	Switchgrass Rhizosphere	TLIINSAVIRVRRADLAAAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS
Ga0207507_1002001	3300026805	Soil	ATGFGRGFLVAAGIALLTLAINIAVIRVSRADLAGAQQPVPAAPADPAQPAVTAKDTNDRRDPPMTTPASKPG
Ga0209180_107969941	3300027846	Vadose Zone Soil	TLIINLAVIRVRRADLAAAQQPEPAPPAGPAQPAVTGKDTNDRRDPDDNSRI
Ga0209465_105419182	3300027874	Tropical Forest Soil	PGGPLAAAIYNHALATGFARAFLVAAGIALLTLIINTAVIRIRRADLAGAQQPEPAAPAHPAQPAVTAQDTNDGTDPDDSSRS
Ga0318516_101539444	3300031543	Soil	LTLAINFAVIRVRRADLAGAEPPALAAPADPAQPAVTAKDTNDSKDPDDNSGS
Ga0310915_109092072	3300031573	Soil	FLVAAGIALLTLIINIAAIRVRRADLAGATQPLPAAPADPAQPAVTAKNTNDRKDPDDNSGS
Ga0318572_104599282	3300031681	Soil	GFARAFLVAAGIALLTLIINIAAIRVRRADLAGATQPLPAAPADPAQPAVTAKNTNDRKDPDDNSGS
Ga0318496_105105371	3300031713	Soil	LATGFARAFLVAAGIALLTLIINIAAIRVRRADLAGATQPLPAAPADPAQPAVTAKNTNDRKDPDDNSGS
Ga0306917_110765521	3300031719	Soil	AFLVAAGIALLTLIINIAAIRVRRADLAGATQPLPAAPADPAQPAVTAKNTNDRKDPDDNSGS
Ga0306917_110973392	3300031719	Soil	RAFLVAAGIALLTLAINFAVIRVRRADLAGAEPPALAAPADPAQPAVTAKDTNDSKDPDDNSGS
Ga0307477_109421052	3300031753	Hardwood Forest Soil	PLAAAIYNHALATGFARGFLVAAGIALLTLIINLAVIRVRRADLAGAQQPEPAAPAHPAQPAVTAKDTNDSADPEGNSRS
Ga0318554_104389111	3300031765	Soil	LVAAGIALLTLIINSAVIRVRRADLAGAEPPAPAAPADPAQPAVTAKDTNDSKDPDDTFG
Ga0318546_111860952	3300031771	Soil	ARAFLVAAGIALLTLIINIAAIRVRRADLAGATQPLPAAPADPAQPAVTAKNTNDRKDPDDNSGS
Ga0318503_102125581	3300031794	Soil	ALATGFARAFLVAAGIALLTLIINIAAIRVRRADLAGATQPLPAAPADPAQPAVTAKNTNDRKDPDDNSGS
Ga0318568_108363832	3300031819	Soil	YNHALATGFARAFLVAAGIALLTLIINIAAIRVRRADLAGATQPPPAAPADPAQPAVTAKNTNDRKDPDDNSGS
Ga0307473_112261092	3300031820	Hardwood Forest Soil	RPGGPLTAAIYNHALATGFGRGFLVAAGIALLTLIINSAVIRVRRADLAAAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS
Ga0318520_101896531	3300031897	Soil	FARAFLVAAGIALLTLIINIAAIRVRRADLAGATQPLPAAPADPAQPAVTAKNTNDRKDPDDNSGS
Ga0306923_123456872	3300031910	Soil	LLTLAINIVVIRVRRADLAGAEPPAPAAPADPAQPAVTAKDTNDSKDPDDNSGS
Ga0310910_111905721	3300031946	Soil	LVAAGIALLTLAINFAVIRVRRADLAGAEPPALAAPADPAQPTMTAKDTNDSKDPDDNSG
Ga0306926_100332818	3300031954	Soil	GIALLTLIINTAVIRIRRADLAGAQQPEPAAPAHPAQPAVTAQDTNDGTDPDDSSRS
Ga0306926_122093622	3300031954	Soil	TGFARAFLVAAGIALLTLIINIAAIRVRRADLAGATQPLPAAPADPAQPAVTAKNTNDRKDPDDNSGS
Ga0318531_103385332	3300031981	Soil	IYNHALATGFARAFLVAAGIALLTLIINIAAIRVRRADLAGATQPLPAAPADPAQPAVTAKNTNDRKDPDDNSGS
Ga0306922_111820972	3300032001	Soil	HPARPGGPLAAAIYNHALATGFARAFLVAAGIALLTLIINTAVIRIRRADLAGAQQPEPAAPAHPAQPAVTAQDTNDGTDPDDSSRS
Ga0318524_105111531	3300032067	Soil	FLVAAGIALLTLAINFAVIRVRRADLAGAEPPALAAPADPAQPAVTAKDTNDSKDPDDNSGS
Ga0307471_1020950591	3300032180	Hardwood Forest Soil	PGGPLAAAIYNHALATGFGRGFLIAAGIALLTLIINTAVIRVRRADLAAAQQPEPAAPAHPAPAATPAQDTNDRTDPR
Ga0307471_1033153322	3300032180	Hardwood Forest Soil	AAARSGHPVHPGAAQLTAAYHHALATGFGRGFLVAAGIALLTLAINIAVIRVRRADLAGTHQPVPAAPAEPAQPEGTAKDTNDRRDPPMTTPASKPG
Ga0306920_1024941002	3300032261	Soil	TLIINTAVIRIRRADLAGAQQPEPAAPAHPAQPAVTAQDTNDGTDPDDSSRS
Ga0310914_101591884	3300033289	Soil	LVAAGIALLTLIINIAAIRVRRADLAGATQPLPAAPADPAQPAVTAKNTNDRKDPDDNSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101950

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences