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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F101927 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 102 |
| Average Sequence Length | 68 residues |
| Representative Sequence | MSDLVHPAVRGSRPEELRGLRERIPLLSLLRKDVASNGPTWLPLVLVLAAIAGVAYADHLVVSLSLVYLY |
| Number of Associated Samples | 80 |
| Number of Associated Scaffolds | 102 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 9.09 % |
| % of genes near scaffold ends (potentially truncated) | 8.82 % |
| % of genes from short scaffolds (< 2000 bps) | 5.88 % |
| Associated GOLD sequencing projects | 70 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.42 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (89.216 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (42.157 % of family members) |
| Environment Ontology (ENVO) | Unclassified (35.294 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (48.039 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 48.98% β-sheet: 0.00% Coil/Unstructured: 51.02% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.42 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 102 Family Scaffolds |
|---|---|---|
| PF07731 | Cu-oxidase_2 | 61.76 |
| PF11453 | DUF2950 | 15.69 |
| PF07732 | Cu-oxidase_3 | 11.76 |
| PF13590 | DUF4136 | 2.94 |
| PF00672 | HAMP | 1.96 |
| PF11737 | DUF3300 | 1.96 |
| PF16576 | HlyD_D23 | 0.98 |
| COG ID | Name | Functional Category | % Frequency in 102 Family Scaffolds |
|---|---|---|---|
| COG2132 | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) | Cell cycle control, cell division, chromosome partitioning [D] | 73.53 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 89.22 % |
| All Organisms | root | All Organisms | 10.78 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300005178|Ga0066688_10006048 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia | 5582 | Open in IMG/M |
| 3300009088|Ga0099830_10002108 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 10435 | Open in IMG/M |
| 3300012927|Ga0137416_11428189 | All Organisms → cellular organisms → Bacteria | 627 | Open in IMG/M |
| 3300015054|Ga0137420_1228785 | All Organisms → cellular organisms → Bacteria | 860 | Open in IMG/M |
| 3300020579|Ga0210407_10003239 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 13335 | Open in IMG/M |
| 3300020581|Ga0210399_10974404 | All Organisms → cellular organisms → Bacteria | 684 | Open in IMG/M |
| 3300021046|Ga0215015_10243713 | All Organisms → cellular organisms → Bacteria | 567 | Open in IMG/M |
| 3300021088|Ga0210404_10224181 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1015 | Open in IMG/M |
| 3300026540|Ga0209376_1021505 | All Organisms → cellular organisms → Bacteria | 4272 | Open in IMG/M |
| 3300027671|Ga0209588_1000877 | All Organisms → cellular organisms → Bacteria | 7651 | Open in IMG/M |
| 3300027846|Ga0209180_10127578 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum | 1460 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 42.16% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 15.69% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 10.78% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 9.80% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 4.90% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.92% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 2.94% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 2.94% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.98% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.98% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.98% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.98% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.98% |
| Boreal Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil | 0.98% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300002914 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm | Environmental | Open in IMG/M |
| 3300005174 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 | Environmental | Open in IMG/M |
| 3300005178 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 | Environmental | Open in IMG/M |
| 3300005184 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 | Environmental | Open in IMG/M |
| 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
| 3300005447 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 | Environmental | Open in IMG/M |
| 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
| 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
| 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
| 3300005552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 | Environmental | Open in IMG/M |
| 3300005557 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 | Environmental | Open in IMG/M |
| 3300005559 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 | Environmental | Open in IMG/M |
| 3300005610 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 | Environmental | Open in IMG/M |
| 3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
| 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Environmental | Open in IMG/M |
| 3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
| 3300007258 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 | Environmental | Open in IMG/M |
| 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Environmental | Open in IMG/M |
| 3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
| 3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
| 3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
| 3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
| 3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
| 3300010865 | Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
| 3300012198 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG | Environmental | Open in IMG/M |
| 3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
| 3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
| 3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
| 3300012918 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG | Environmental | Open in IMG/M |
| 3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
| 3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300014157 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG | Environmental | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300015054 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300015264 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
| 3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
| 3300020170 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
| 3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
| 3300021046 | Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth | Environmental | Open in IMG/M |
| 3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
| 3300021171 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M | Environmental | Open in IMG/M |
| 3300021403 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O | Environmental | Open in IMG/M |
| 3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
| 3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300024249 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17 | Environmental | Open in IMG/M |
| 3300024330 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300026330 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes) | Environmental | Open in IMG/M |
| 3300026332 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes) | Environmental | Open in IMG/M |
| 3300026333 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes) | Environmental | Open in IMG/M |
| 3300026354 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B | Environmental | Open in IMG/M |
| 3300026355 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A | Environmental | Open in IMG/M |
| 3300026359 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A | Environmental | Open in IMG/M |
| 3300026540 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes) | Environmental | Open in IMG/M |
| 3300026551 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300027575 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027643 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027663 | Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027846 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027862 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027882 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027911 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes) | Environmental | Open in IMG/M |
| 3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300029636 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
| 3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
| 3300031823 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 | Environmental | Open in IMG/M |
| 3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI25617J43924_100398651 | 3300002914 | Grasslands Soil | MNDAVHSAVRDSKPGESRGHRERRPLLSLLRKDVASNGPAWLPLVLVL |
| JGI25617J43924_100500031 | 3300002914 | Grasslands Soil | MTDLARAYTPESKPAEWRGLRERFPLLPLLRKGVASDGPAWLPLVLVFGAFGAVAYADHLVVAIS |
| Ga0066680_105825821 | 3300005174 | Soil | MNDLVHLAVGESKPAESHGLRKWIPLVSLLRKDVASNGPAWLPIALVLGAISAVAYADHL |
| Ga0066688_100060487 | 3300005178 | Soil | MSDLLHLSVRESRSAELRGTLERIPLLSRLRKELASNRPTWLPLVLVLAAIAVVAY |
| Ga0066671_105744411 | 3300005184 | Soil | MNEIVHSAIRESKPALLRGLREAVPLLSVLRKDVALSGPTWLPLSLVLGAVSAVAYADHLVVSISLVYLYLL |
| Ga0070708_1016386242 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MPCPPAAWESKPAELRGLRERIPLLSLLRKDVASNGPRWLPLVLVLGALGAVVYADRRVVSISLTYLYILPLGIGAIFLRRE |
| Ga0066689_100166581 | 3300005447 | Soil | MSDLVHHAVGESRPAVFRGLRESVLRLSLLRKDWAANGPPWLPLVLVLAAIAGVAYADHLVVSLSL |
| Ga0070707_1010395921 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDLVYLAVRESKPAKSYRLRKWIPLVSLLRKDVASNGPAWLPLVLVLGAISAVAYVDHFVVSISLVYLYILPLAVGAIC |
| Ga0070698_1011115032 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MSDLVHPALRESRRPELRALRERTPLLSLLRKDVASKRPAWLPFVLVLAAIAAVAYADHL |
| Ga0070672_1021215641 | 3300005543 | Miscanthus Rhizosphere | MSDLVQPVVRQSRPAELRGLREGIPLLSILRRDVASVSPVWLPFVLVLAAIAGVAYVDHLVVSLSLVYLYT |
| Ga0066701_108085681 | 3300005552 | Soil | MIELPHSAAPESKPAKPNGLDGRLPLRFLLRKDVASNGPAWLPLVLVLGAISAVAYADHLVVSISLVYLYILP |
| Ga0066704_100888483 | 3300005557 | Soil | MNDLVHPAVRVSRPAELRGLRERVPLLSLLRRDVAVNGPSWLPLALVLGAVSAVAYADHVVVSIS |
| Ga0066700_102293731 | 3300005559 | Soil | MSDLLHLSVRESRSAELRGTLERIPLLSRLRKELASNRPTWLPLVLVLAAIAVV |
| Ga0070763_100702951 | 3300005610 | Soil | MSDLVHPAVRGLRPGELRGTRERIPLLSLLQKDVASNGPTWLPLTLVLAAIAGIAYVDHLIV |
| Ga0070766_111903981 | 3300005921 | Soil | MSDLAHPAVRGSRPGELRGLRERIPLLSLLRKDVASNGPTWLPLVMVLAAI |
| Ga0070715_108880551 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MSDLAQRVARQSKPQELRGLRERIPLLSLLRRDVAFVRPVWLPFVLVLAAIAGVAYVDHLVVSLSLVYLYTL |
| Ga0099791_102213613 | 3300007255 | Vadose Zone Soil | MNHLAHPVVTESKPAGWRGLREDASLSPFLRKDVASYGPAWLPPLLVLGAIATVGYAD |
| Ga0099793_105214901 | 3300007258 | Vadose Zone Soil | MNDVAHPAVRESEPVELRGFRERIPLLSLLRKDVASNGPAWLPLVLVLGAIGAVAYADHLVLSISLVYLYIFPLGVGAIF |
| Ga0099794_100082881 | 3300007265 | Vadose Zone Soil | MNHLAHPVVTESKPAGWRGLREDASLSPFLRKDVASYGPAWLPPLLVLGAIATVGYADHRVASISLIYLYILPLTFG |
| Ga0099794_101152101 | 3300007265 | Vadose Zone Soil | MTAAVRESMPAEVRDPRKSVPLLHLLRKDVASSGPAWLPLLLVLGAIGAVAYADHLV |
| Ga0099794_105741372 | 3300007265 | Vadose Zone Soil | MNHLAHPVVTESKPAEWRGLREDASLSPLLRKDVASNGPTWLPLLLVLGAIATVGYADHR |
| Ga0099794_106375342 | 3300007265 | Vadose Zone Soil | MNHLAHPVVTESKPAGWRGLREDASLSPFLRKDVASYGPTWLPLLLVLGAIATVGYADHRVVSISLIYLYIFPLTVGAIFLRKEM |
| Ga0099794_108031052 | 3300007265 | Vadose Zone Soil | MNDAGHPAVSESKPAELRGLRERLPLLSLLRKDVASNGPAWLPLVLVLGAIGAVMYAD |
| Ga0066710_1020400382 | 3300009012 | Grasslands Soil | MNDLVHPAVRVSRPAELRGLRERVPLLSLLRRDVAVNGPSWLPLALVLG |
| Ga0099829_107422002 | 3300009038 | Vadose Zone Soil | MSDLVHLAVRESKPAESHGLRKWIPLVSLLRKDVASNGPVWLPLVLVLGAIGAVAYADRLVVSLSLVYLYILPLAVGAIFLRK |
| Ga0099830_100021081 | 3300009088 | Vadose Zone Soil | MNHLLHPAVTESKPAELDGLREDISLSPLLRKDVASNGPAWLPLLLVLGAIATVAYADHRVVSISLIYLYILPL |
| Ga0099830_103803851 | 3300009088 | Vadose Zone Soil | MNDLAHPTVRESRPAELSGLRERVLLASLLRKDVALNGPAW |
| Ga0099828_100148246 | 3300009089 | Vadose Zone Soil | MNHLLHPAVTESKPAELDGLREDISLSPLLRKDVASNGPAWLPLLLVLGAIATVAYA |
| Ga0099792_105952951 | 3300009143 | Vadose Zone Soil | MNELVHSAIRESKPAVLRGLHEGVPLLSFLRKDVALSGPAWLPLSLVLGAVSAVAYADHLVVSISLVYLYLLPLV |
| Ga0126346_10137402 | 3300010865 | Boreal Forest Soil | MSDLVHLVVRESRPAALRGLRDSIPLLSLLRKDVALNGPAWLPFVLVLGALSA |
| Ga0137388_106763102 | 3300012189 | Vadose Zone Soil | MNDLVHPAVRESMPAELRGLRERVPLLSLLRRDVALNGPSWLRLALVLGAVSAVAYADHVVVSISLVYLY |
| Ga0137388_111427271 | 3300012189 | Vadose Zone Soil | MNDLVHLAVRESKPAKSYGLRKWIPLVSLLRKDVASNGPAWLPLVLVLGAISAVAYADHLVVSISLVYLYILPLAVGAI |
| Ga0137364_114317942 | 3300012198 | Vadose Zone Soil | MNDLVHPVVRESRLAELRGLRESVPWLTILRKDVAFTGHAWLPIAL |
| Ga0137383_105353371 | 3300012199 | Vadose Zone Soil | MSDLVQHVVRQSKPAELRSLREGIPLLSLLRRDLVSGRPAGLPFVLVLAAIAGVAYVDHLVVSLSLVYLYTRPLTVGTI |
| Ga0137361_117103861 | 3300012362 | Vadose Zone Soil | MNDAGHPAVSESKPAELRGLRERLPLLSLLRKDVASNGPAWLPLVLVLGAIGAVMYADRRVVSISLTYLYILPL |
| Ga0137390_114908411 | 3300012363 | Vadose Zone Soil | MSDLVHLAVGESKSDKSYGLRKWIPLVSLLRKDVASNGPAWLPLVLVLGAIGAVAYADHLVVSLSLAYLYILPL |
| Ga0137358_101494851 | 3300012582 | Vadose Zone Soil | MNDLVHPVVRESRLAELRGLRERVPWLSILRKDVALNGPAWLP |
| Ga0137396_102349382 | 3300012918 | Vadose Zone Soil | MNDLAHTAVRESRPAEVHGLRKRVPLLSLLRKDVASNGPAWLPLGLVLGAIGAVAYADHLVVSVSLVYLYIL |
| Ga0137396_109042201 | 3300012918 | Vadose Zone Soil | MNHLLHSAVTESKAAELRGLREDISLSPLLRKDVASNGPTWLPLLLVLGAIASVAYADHLVVSISLVYLYILPLAVGAI |
| Ga0137396_110207191 | 3300012918 | Vadose Zone Soil | MNDLVHSAVRESSTAELRGLRERVPLLFLLRKDVASNGPVWPPLVLVLGAISAVAY |
| Ga0137359_106515421 | 3300012923 | Vadose Zone Soil | MSDLVHLAVGESKPAESQGLRKWIPLVSLLRKDVASNGPAWLPLVLVLGAIGAVAYADHLVVSIS |
| Ga0137419_100720121 | 3300012925 | Vadose Zone Soil | MNDLAHPTVRESRPAELRGLRERVLLASLLRKDVALNGPAWLPLALVLGAISAVAYADHLVVSISLIYLYILPLAVG |
| Ga0137416_114281892 | 3300012927 | Vadose Zone Soil | MTAAVRESMPAELRDPRKSVPLLHLLRKDVASSGPAWLPLLLVLGAIGAVAYADHLVVSVSLVYLYILPLGVGAIFLRKEI |
| Ga0137416_119910192 | 3300012927 | Vadose Zone Soil | MNDLAHTAVRESRPAEVHGLRKRVPLLSLLRKDVASNGPAWLPLVLVLGAISA |
| Ga0137404_107309561 | 3300012929 | Vadose Zone Soil | MNDLAHPTVRESRPAELRGLRESVLLASLLRKDVALNGPAWLPLALVLGAISAVAYADHLVVSISLIYLYILPLAVGA |
| Ga0134078_101636201 | 3300014157 | Grasslands Soil | MNDLVHFAVGESKPAESHGLRKWVPLVSFLRKDVASKGPAWQPLLLVLGAIGAVAYADHLVVS |
| Ga0163163_130008472 | 3300014325 | Switchgrass Rhizosphere | MSDLVQPVVRQSRPAELRGLREGIPLLSILRRDVASVSPVWLPFVLVLAAIAGVAYVDHLVVSLSLVYLYTLPLTVGAIF |
| Ga0137420_12287852 | 3300015054 | Vadose Zone Soil | MSDLLHLSVRESRSAELRGTLERIPLLSRLRKELASNRPTWLPLVLVLAAIAVVAYADHLVVSLSLVYLYTLPLTVGAIF |
| Ga0137403_115524632 | 3300015264 | Vadose Zone Soil | MSDLVHPAVRESTPPKLLELREGAPWLPLLRKEVASNGAAWLPLVLVLGAYGAVAYADHLVVSISLVYLYILP |
| Ga0187817_107071071 | 3300017955 | Freshwater Sediment | MSDLVHPVLREPRRVQLRGLRERIPLLSLLWKEVASNRPAWLPLALVL |
| Ga0066662_127450291 | 3300018468 | Grasslands Soil | MNEIVHSAIRESKPAVLRGLHEGVPLLSFLRKDVALSGPAWLPLSLVLGAVSAVAYADHLVVSISLVYLY |
| Ga0179594_101469281 | 3300020170 | Vadose Zone Soil | MTAAVRESVPAELRDPRKSVPLLRLLRKDVASSGPAWLPLLLVLGAIGAVAYADHLVVSLSLIYL |
| Ga0179594_102790122 | 3300020170 | Vadose Zone Soil | MNELVHSAIRESRPAVLRGLREGVPLLSVLRKDAALNGPAWLPLSLVLGAVGAVAYADHLVVSI |
| Ga0210407_100032393 | 3300020579 | Soil | MNDLAHLAVRESTTPAELRGLGKRVSLLSLLRKDVASNGTAWLPLVLVLGAIGAVAHADHFVVSISLTSVHPELHRP |
| Ga0210407_102437452 | 3300020579 | Soil | MSDLAHPADRGSRPWELRGLPEWIPLLSLLRTDEASNGPTWFPLVLVLAAIAGVAYIDHLVVSLSLVYLYTLPL |
| Ga0210407_102856502 | 3300020579 | Soil | MNDLVQPAVRGSRPGELRGIRERIPLLSLLQKDVASNGPTWLPLVLVLAAIAGVAYVDHLVVSLSLVYLYT |
| Ga0210399_109146421 | 3300020581 | Soil | MSDLVHPAVRGSRPGELRGLRERVPLLSLLRKEVASNGPTCLPLVLVLAAIAGVAYVDHLVVSLSLVYLYTLPLTVGAI |
| Ga0210399_109744041 | 3300020581 | Soil | MNDLVQPAVRGSRPGELRGIRERIPLLSLLQKDVASNGPTWLPLVLVLAAIAGVAYVDHLVVSLSLVYLYTLPLTVGAIFLRKE |
| Ga0215015_102437131 | 3300021046 | Soil | MNDLVHLAVGESKPAKWHGLRKWVPLPSLLRKDVVSNGPAWLPLVLVLGAIGAVAYADHLVVSISLVYLYILPLAVGAIFPVSYTHLTLPTICSV |
| Ga0210404_102241813 | 3300021088 | Soil | MAHPVLRESRRVELRGLGEKIPSLSLLRKDVASNRPAWLPLALVLPAIAGVAYADHLVVSLSLVHLYTM |
| Ga0210405_108319492 | 3300021171 | Soil | MSDLVHPDLRGSRPEELRGLRERIPLPSLLRKAVTSNGPTWLPLVLVLAAIAGVAYADHLVVS |
| Ga0210397_100861281 | 3300021403 | Soil | MSDLAHPVLPEPRRVELRGLRERIPLLSLVWKEVASNRPAWLPLALVLVAIAGVAYA |
| Ga0210394_107743641 | 3300021420 | Soil | MNDLVHPAVLESLQAKLFGARRRIPLLALLQRNVASNGPAWLPLVLVLGAIGAVAYADHLVVSISLVYLYILPLAVGAIFLRKE |
| Ga0210402_118126902 | 3300021478 | Soil | MSELVHRAIRGSSATELRGLREGDPLQSLLRRDVASNGPTWLPLIMVLAAIAAVAYADYVVVIPSLIYL |
| Ga0210410_103950732 | 3300021479 | Soil | MSDLVHPVVRNSRHPELRGLRERVPLLSLLRRDVISNRPAWLPLALVLAAIAGVAYVDHIVVSLSLVYLYTLPITVG |
| Ga0247676_10052424 | 3300024249 | Soil | MNDLLHPVIPESRPSELDEFRERAPLLPLLRKDLASDGPTWLPLILALATIAGVAYVDHLVVSLSLVY |
| Ga0137417_12660302 | 3300024330 | Vadose Zone Soil | MNDVAHPAVRESEPVELRGFRERIPLLSLLRKDVASNGPAWLPLVLVLGAIGAVAYAD |
| Ga0209473_10462023 | 3300026330 | Soil | MNDLVHFAVGESKPAESHGLRKWVPLVSFLRKDVASKGPAWPPLLLVLGAIGAVAYADHLVVSISLVYLYILPLAVGAIFL |
| Ga0209803_11726841 | 3300026332 | Soil | MSDLVHHAVGESRPAVFRGLRESVLRLSLLRKDWAANGPPWLPLVLVLAAIAGVAYADHLVVSLSLVYLYTLPLTV |
| Ga0209158_13663002 | 3300026333 | Soil | MNDLAHLAVRESTSTPAELRGLRKRVPLLSLLRKDVASNGPAWLPIVLVLGAISAVAYADHLVVSISL |
| Ga0257180_10600862 | 3300026354 | Soil | MNHLLHPAVTESKPAELDGLREDISLSPLLRKDVASNGPAWLPLLLVLGAIATVAYADHRVVSISLIYLYILPLSV |
| Ga0257149_10515721 | 3300026355 | Soil | MNDLAHPTVRESRPAELRGLRERVLLASLLRKDVALNGPAWLPLALVL |
| Ga0257163_10802042 | 3300026359 | Soil | MSDLVHPAVRESTPPKLLELREGAPWLPLLRKEVASNGAAWLPLVLVLGAFGAVAYADHLVVSISLVYLY |
| Ga0209376_10215051 | 3300026540 | Soil | MSDLVHHAVGESRPAVFRGLRESVLLLSLLRKDWAANGPPWLPLVLVLAAIAGVAYADHLVVSLSLVYLYTLPLTLG |
| Ga0209648_103090091 | 3300026551 | Grasslands Soil | MNDLVHPAVRVSRPAELRGLRERVPLLSLLRRDVALNGPSWLPLALVLGAVSAVAYADHVVVSISLVYLYILPLAVGAIFL |
| Ga0179587_104501041 | 3300026557 | Vadose Zone Soil | MSATTRPLLPAKLHDTHERFPLLSLLRKDIASDGPTWLPLVLVLAAIAAVAYADHLIVSLSLVFLYTLPLTIGAIFLR |
| Ga0209525_10603211 | 3300027575 | Forest Soil | MSATTRPLLPAKLRDSRERFPLLSLLRKDIASHGPTWLPLVLVLAAIAGIAYVDHLVVSLSLVYL |
| Ga0209076_11975031 | 3300027643 | Vadose Zone Soil | MNDVAHPAVRESEPVELRGFRERIPLLSLLRKDVASNGPAWLPLVLVLGAIGAVAYADHLVLS |
| Ga0208990_11127442 | 3300027663 | Forest Soil | MSAAVREPRPAELRDASESVPLLRLLRKDVASSGPAWLPLLLVLGATGAVAYADHLVVSVSLVYLYILP |
| Ga0209588_10008771 | 3300027671 | Vadose Zone Soil | MNHLLHPTVTESKPAELRGLREDISLSPLLRKDVASNGPAWLPLLLVLGAIATVAYADHRVVSLSLIYLYILPLSVGAIFLR |
| Ga0209588_12191731 | 3300027671 | Vadose Zone Soil | MNHLAHPVVTESKPAGWRGLREDASLSPFLRKDVASYGPTWLPLLLVLGAIATVGYADHRVVSISLIYLYIFPLTVGAIFLRKEMS |
| Ga0209180_101275783 | 3300027846 | Vadose Zone Soil | MNHLAHPVVTESKPAEWRGLREDASLSPLLRKDVASNGPTWLPLLLVLGAIATVGYADHRVVSISLIYLYIFPLTVGAIFLRKEMSYGL |
| Ga0209701_100499591 | 3300027862 | Vadose Zone Soil | MNRLLHPTVTELKPAELRGLREDISLSPLLRKDVASNGPAWLPLLLVLGAIATVAYADHRVVSLSLIYLYILPLSV |
| Ga0209701_103038272 | 3300027862 | Vadose Zone Soil | MNHLLHPAVTESKPAELDGLREDISLSPLLRKDVASNGPAWLPLLLVLGAIATVAY |
| Ga0209590_103537142 | 3300027882 | Vadose Zone Soil | MNDLAHPTVRESRPAELRGLRERVLLASLLRKDVALNGPAWLPLALVLGAISAVAYADHLVVSISLIY |
| Ga0209275_103351961 | 3300027884 | Soil | MNDLVHPAVLESLQAKLFGARRRIPLLALLQRNVASNGPAWLPLVLVLGAIGAVAYADHLVVSIS |
| Ga0209488_101233903 | 3300027903 | Vadose Zone Soil | MNDLVHPAVRESRPAELRGLRKRVLLLSLLRKDVASNGPAWLPLALILGAIGAVAYADHLVVSISLVYLYILPL |
| Ga0209488_104821612 | 3300027903 | Vadose Zone Soil | MNDLAHPTVRESRPAELRGLRERVLLASLLRKDVALNGPAWLPLALVLGAISAVAYADH |
| Ga0209488_106821751 | 3300027903 | Vadose Zone Soil | MNDLVHPAVRVSRPAELRGLRERVPLLPLLRRDVALNGPAWLPLVLVL |
| Ga0209698_106844751 | 3300027911 | Watersheds | MSDLVHPAVRGSRPEELRGLRERIPLLSLLRKDVASNGPTWLPLVLVLAAIAGVAYADHLVVSLSLVYLY |
| Ga0209526_109188012 | 3300028047 | Forest Soil | MNELVHSAIRESKPAVLRGLHEGVPLLSFLRKDVALTGPAWLPLSLVLGAVSAVAYADHLVASISLVYLYLLPLVLGAIFLRKEIS |
| Ga0222749_100433021 | 3300029636 | Soil | MSDLAHPAVRGSRPGELRGLRERIPLLSLLRKDVASNGPTWLPLVMVLAAIAGVAYIDHLVVSLSLV |
| Ga0307469_103464371 | 3300031720 | Hardwood Forest Soil | MSDMVQPAVRGSRPEELRGLRERIPLLSLLRKDVASNGPTWLPLVLVLAAIA |
| Ga0307477_101079771 | 3300031753 | Hardwood Forest Soil | VSELVHPVLRQSRRAEMRGLHERIPFLSLLWKDVASARPAWLPIGLVLAAIA |
| Ga0307477_104106731 | 3300031753 | Hardwood Forest Soil | MSDLVHPALRGSRPEELRGLRERIPLLPLLRKAVTSNGPTWLPLVLVLAAIAGVAYADHL |
| Ga0307477_105456371 | 3300031753 | Hardwood Forest Soil | MSDLVQPVVRQSKPVELRGLREGIPLLSLLRRDVASVRPVWLPFVLVLPVIAGVAYVDHLAVSLSLVY |
| Ga0307475_100972533 | 3300031754 | Hardwood Forest Soil | MSDLVHPDLRGSRPEELRGLRERIPLLSLLRKAVTSNGPTWLPLIFVLAAIAGVAYADHLVVSLSLVYLYT |
| Ga0307475_104241382 | 3300031754 | Hardwood Forest Soil | MNDLVHHAVREPMLANLRDLRESVLLLPLLRKDVALNGPAWLPLVLVLGAIVAVAYADHL |
| Ga0307478_100476544 | 3300031823 | Hardwood Forest Soil | MSDLVHRIVREPRPAELRGPRKGFLLLSLLRKDVASSGPAWLPLVLVLGAISAVAYADHL |
| Ga0307479_108751711 | 3300031962 | Hardwood Forest Soil | MNELVHSAIRESKPAVLRGLREGVPLQSVLRKDVALNGPAWLPLALVLGAVSAVAYADHVVVSISLVYLYILPLAVGAIF |
| Ga0307471_1008912711 | 3300032180 | Hardwood Forest Soil | MNHLPHPTATESKPAKLRGLREDSISLSPLLRKDVASNGPAWLPLLLVLGAIGAVAYADH |
| Ga0307471_1036842421 | 3300032180 | Hardwood Forest Soil | MNHLLHPTVTESKPAELRGLREDISLSPLLRKDVASSGPAWLPLLLVLGAIGAVAYADHLVVSLS |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |