Metagenome / Metatranscriptome Family F101919

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101919
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	74 residues
Representative Sequence	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPHRYEPNTRESTDQ
Number of Associated Samples	90
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.88 %
% of genes near scaffold ends (potentially truncated)	32.35 %
% of genes from short scaffolds (< 2000 bps)	78.43 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.902 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.784 % of family members)
Environment Ontology (ENVO)	Unclassified (32.353 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.922 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.50% β-sheet: 0.00% Coil/Unstructured: 49.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF14535	AMP-binding_C_2	11.76
PF00072	Response_reg	6.86
PF00581	Rhodanese	6.86
PF01894	UPF0047	6.86
PF10417	1-cysPrx_C	4.90
PF00535	Glycos_transf_2	1.96
PF00656	Peptidase_C14	1.96
PF07519	Tannase	1.96
PF13924	Lipocalin_5	0.98
PF01137	RTC	0.98
PF02518	HATPase_c	0.98
PF00069	Pkinase	0.98
PF12836	HHH_3	0.98
PF13416	SBP_bac_8	0.98
PF00154	RecA	0.98
PF02449	Glyco_hydro_42	0.98
PF00378	ECH_1	0.98
PF00196	GerE	0.98
PF01790	LGT	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	6.86
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.92
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	1.96
COG0430	RNA 3'-terminal phosphate cyclase	RNA processing and modification [A]	0.98
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.98
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.90 %
Unclassified	root	N/A	45.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.90 %
Unclassified	root	N/A	45.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.90 %
Unclassified	root	N/A	45.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.86 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.73 %
candidate division LCP-89	phylum	All Organisms → cellular organisms → Bacteria → FCB group → candidate division LCP-89	3.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.94 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.98 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.75 %
candidate division LCP-89 bacterium B3_LCP	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division LCP-89 → candidate division LCP-89 bacterium B3_LCP	3.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.98 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.98 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.75 %
candidate division LCP-89 bacterium B3_LCP	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division LCP-89 → candidate division LCP-89 bacterium B3_LCP	3.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.98 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.98 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.75 %
candidate division LCP-89 bacterium B3_LCP	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division LCP-89 → candidate division LCP-89 bacterium B3_LCP	3.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.98 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.98 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.75 %
candidate division LCP-89 bacterium B3_LCP	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division LCP-89 → candidate division LCP-89 bacterium B3_LCP	3.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
pseudomallei group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group	0.98 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.98 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.75 %
candidate division LCP-89 bacterium B3_LCP	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division LCP-89 → candidate division LCP-89 bacterium B3_LCP	3.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.98 %
Burkholderia pseudomallei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	0.98 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.75 %
candidate division LCP-89 bacterium B3_LCP	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division LCP-89 → candidate division LCP-89 bacterium B3_LCP	3.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.98 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.98 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y02JPUEH	Not Available	562	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100490565	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300001139\|JGI10220J13317_10447185	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300001431\|F14TB_100623735	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	1282	Open in IMG/M
3300001431\|F14TB_102257259	Not Available	916	Open in IMG/M
3300003267\|soilL1_10020551	All Organisms → cellular organisms → Bacteria → Proteobacteria	7408	Open in IMG/M
3300003321\|soilH1_10331138	All Organisms → cellular organisms → Bacteria → Acidobacteria	1131	Open in IMG/M
3300003324\|soilH2_10004606	All Organisms → cellular organisms → Bacteria	6302	Open in IMG/M
3300004022\|Ga0055432_10088112	Not Available	800	Open in IMG/M
3300004114\|Ga0062593_100105662	Not Available	2002	Open in IMG/M
3300004157\|Ga0062590_100427061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1098	Open in IMG/M
3300004463\|Ga0063356_105203065	Not Available	559	Open in IMG/M
3300004480\|Ga0062592_100782022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300004480\|Ga0062592_101223394	Not Available	704	Open in IMG/M
3300005093\|Ga0062594_100024785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2616	Open in IMG/M
3300005288\|Ga0065714_10452394	Not Available	552	Open in IMG/M
3300005289\|Ga0065704_10086191	All Organisms → cellular organisms → Bacteria	3145	Open in IMG/M
3300005293\|Ga0065715_10174276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1523	Open in IMG/M
3300005294\|Ga0065705_10034899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300005294\|Ga0065705_10829259	Not Available	600	Open in IMG/M
3300005332\|Ga0066388_103656805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	785	Open in IMG/M
3300005334\|Ga0068869_100109893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2096	Open in IMG/M
3300005337\|Ga0070682_100937383	Not Available	714	Open in IMG/M
3300005343\|Ga0070687_100028431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2712	Open in IMG/M
3300005355\|Ga0070671_100035068	All Organisms → cellular organisms → Bacteria → FCB group → candidate division LCP-89 → candidate division LCP-89 bacterium B3_LCP	4156	Open in IMG/M
3300005367\|Ga0070667_100711584	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300005445\|Ga0070708_101247266	Not Available	695	Open in IMG/M
3300005459\|Ga0068867_101925384	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005526\|Ga0073909_10646687	Not Available	526	Open in IMG/M
3300005544\|Ga0070686_100280672	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300005549\|Ga0070704_101640665	Not Available	593	Open in IMG/M
3300005618\|Ga0068864_100050459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	3582	Open in IMG/M
3300005713\|Ga0066905_100142004	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300005713\|Ga0066905_102032412	Not Available	534	Open in IMG/M
3300005937\|Ga0081455_10073565	All Organisms → cellular organisms → Bacteria	2825	Open in IMG/M
3300006046\|Ga0066652_100123422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2130	Open in IMG/M
3300006046\|Ga0066652_100300713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1425	Open in IMG/M
3300006163\|Ga0070715_11016951	Not Available	517	Open in IMG/M
3300006358\|Ga0068871_100058478	All Organisms → cellular organisms → Bacteria	3139	Open in IMG/M
3300006579\|Ga0074054_11659150	Not Available	888	Open in IMG/M
3300006755\|Ga0079222_11278066	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300006844\|Ga0075428_100206853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2121	Open in IMG/M
3300006844\|Ga0075428_102083940	Not Available	587	Open in IMG/M
3300006852\|Ga0075433_10408278	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300006854\|Ga0075425_100035986	All Organisms → cellular organisms → Bacteria	5513	Open in IMG/M
3300006871\|Ga0075434_100839147	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300006969\|Ga0075419_10705357	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300009090\|Ga0099827_11051290	Not Available	707	Open in IMG/M
3300009094\|Ga0111539_10154537	All Organisms → cellular organisms → Bacteria	2685	Open in IMG/M
3300009094\|Ga0111539_10435758	Not Available	1526	Open in IMG/M
3300009100\|Ga0075418_10766277	Not Available	1041	Open in IMG/M
3300009148\|Ga0105243_12123960	Not Available	597	Open in IMG/M
3300009176\|Ga0105242_10887358	Not Available	890	Open in IMG/M
3300009792\|Ga0126374_10350562	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300010040\|Ga0126308_11307830	Not Available	515	Open in IMG/M
3300010047\|Ga0126382_10346424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1136	Open in IMG/M
3300010360\|Ga0126372_10444378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	1199	Open in IMG/M
3300010360\|Ga0126372_12074079	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300010362\|Ga0126377_10048845	All Organisms → cellular organisms → Bacteria → Proteobacteria	3678	Open in IMG/M
3300010362\|Ga0126377_10256100	Not Available	1707	Open in IMG/M
3300010366\|Ga0126379_10663153	Not Available	1134	Open in IMG/M
3300010399\|Ga0134127_10027565	All Organisms → cellular organisms → Bacteria → Acidobacteria	4495	Open in IMG/M
3300011444\|Ga0137463_1318237	Not Available	566	Open in IMG/M
3300012201\|Ga0137365_10605789	Not Available	803	Open in IMG/M
3300012204\|Ga0137374_10454599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1004	Open in IMG/M
3300012207\|Ga0137381_11187945	Not Available	655	Open in IMG/M
3300012360\|Ga0137375_10077022	All Organisms → cellular organisms → Bacteria → Acidobacteria	3494	Open in IMG/M
3300012493\|Ga0157355_1014350	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300012948\|Ga0126375_10409606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	983	Open in IMG/M
3300012958\|Ga0164299_10173970	All Organisms → cellular organisms → Bacteria → Acidobacteria	1217	Open in IMG/M
3300012960\|Ga0164301_10868433	All Organisms → cellular organisms → Bacteria → FCB group → candidate division LCP-89 → candidate division LCP-89 bacterium B3_LCP	697	Open in IMG/M
3300012987\|Ga0164307_11930566	Not Available	500	Open in IMG/M
3300012989\|Ga0164305_11452725	Not Available	606	Open in IMG/M
3300013297\|Ga0157378_10527388	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300013307\|Ga0157372_13058343	Not Available	534	Open in IMG/M
3300014969\|Ga0157376_10996374	Not Available	860	Open in IMG/M
3300014969\|Ga0157376_11327032	Not Available	750	Open in IMG/M
3300015372\|Ga0132256_100575791	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300015373\|Ga0132257_101277832	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300018083\|Ga0184628_10012594	All Organisms → cellular organisms → Bacteria	4095	Open in IMG/M
3300025885\|Ga0207653_10059281	Not Available	1288	Open in IMG/M
3300025893\|Ga0207682_10490543	Not Available	582	Open in IMG/M
3300025901\|Ga0207688_10232320	Not Available	1113	Open in IMG/M
3300025908\|Ga0207643_10031819	All Organisms → cellular organisms → Bacteria → Acidobacteria	2943	Open in IMG/M
3300025918\|Ga0207662_10017094	All Organisms → cellular organisms → Bacteria	4100	Open in IMG/M
3300025922\|Ga0207646_11094449	Not Available	702	Open in IMG/M
3300025931\|Ga0207644_10196863	All Organisms → cellular organisms → Bacteria → FCB group → candidate division LCP-89 → candidate division LCP-89 bacterium B3_LCP	1587	Open in IMG/M
3300025945\|Ga0207679_11400914	Not Available	641	Open in IMG/M
3300025960\|Ga0207651_10969004	Not Available	759	Open in IMG/M
3300026088\|Ga0207641_10322929	All Organisms → cellular organisms → Bacteria → FCB group → candidate division LCP-89 → candidate division LCP-89 bacterium B3_LCP	1464	Open in IMG/M
3300026116\|Ga0207674_11224996	Not Available	720	Open in IMG/M
3300027873\|Ga0209814_10226067	Not Available	810	Open in IMG/M
3300027880\|Ga0209481_10042568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2086	Open in IMG/M
3300028803\|Ga0307281_10049298	Not Available	1319	Open in IMG/M
3300031226\|Ga0307497_10344752	Not Available	696	Open in IMG/M
3300031231\|Ga0170824_110635076	Not Available	608	Open in IMG/M
3300031740\|Ga0307468_101296188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300031740\|Ga0307468_101520332	Not Available	621	Open in IMG/M
3300032180\|Ga0307471_102664102	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300032421\|Ga0310812_10219270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300033433\|Ga0326726_10360876	Not Available	1373	Open in IMG/M
3300033433\|Ga0326726_11287074	Not Available	711	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.76%
Host-Associated	Host-Associated	37.25%
Engineered	Engineered	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.82%
Plants	Host-Associated → Plants	37.25%
Aquatic	Environmental → Aquatic	2.94%
Solid Waste	Engineered → Solid Waste	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.75%
Sediment	Environmental → Aquatic → Sediment	1.96%
Peat	Environmental → Terrestrial → Peat	1.96%
Marine	Environmental → Aquatic → Marine	0.98%
Roots	Host-Associated → Plants → Roots	0.98%
Grass	Engineered → Solid Waste → Grass	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.67%
Loam	Environmental → Terrestrial → Soil → Loam	13.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%
Composting	Engineered → Solid Waste → Grass → Composting	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.92%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.98%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.98%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_00308560	2170459017	Switchgrass, Maize And Mischanthus Litter	CPMKVDAGIHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRQQRYERHTEESTDQTPHRMA
INPhiseqgaiiFebDRAFT_1004905652	3300000364	Soil	MRVDAGVHGVLGTACLVGLSLYVFGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRRMQRYDQRPEQSVD*
JGI10220J13317_104471852	3300001139	Soil	MRVDAGVHGVLGTACLVGLSLYVFGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRRPEQYDQRPEERVK*
F14TB_1006237353	3300001431	Soil	MRVDAGVHGVLGTACLVGLSLYVLGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRRVQRY
F14TB_1022572592	3300001431	Soil	MRVDAGVHGVLGTACLVGLSLYVFGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRRPARYDPRTEESAD*
soilL1_100205518	3300003267	Sugarcane Root And Bulk Soil	MKVDAGVHGLLGTACLVGLSLYVFGAIDWGSRGVALFTLLGFVWVLIVLTSLAGERRRPYRYDHGSEENAVRSDAER*
soilH1_103311382	3300003321	Sugarcane Root And Bulk Soil	MRVDAGVHGVLGVACLVGLSLYALGVIDWGARGVALFSLCGFVWLLVVITGVAADQRERPARDRQRDERKRE*
soilH2_100046065	3300003324	Sugarcane Root And Bulk Soil	MRVDAGVHGVLGTACLVGLSLYVFGAIDWGARGVALFTLLGFVWVLIVLTGLAGANRRSTQRYDPRAEERAD*
Ga0055432_100881122	3300004022	Natural And Restored Wetlands	MRVDAGVHGVLGTACLVGLSLYVLGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRRQRYEQRPEKSPD*
Ga0062593_1001056622	3300004114	Soil	MRVDAGVHGVLGTTCLVGLSLYVFGAIDWGSRGVALFTLLGFVWVLIVLTGLAGEQRRRVQRYDQRPEESAD*
Ga0062590_1004270612	3300004157	Soil	MRVDAGVHGVLGTTCLVGLSLYVFGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPQRYEQHNPESDQTPHRMA*
Ga0063356_1052030652	3300004463	Arabidopsis Thaliana Rhizosphere	PTQQIRADLRPELRMRVDAGVHGVLGTACLVGLSLYVFGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRRPEQYDQRPEERVK*
Ga0062592_1007820222	3300004480	Soil	MRVDAGVHGVLGTTCLVGLSLYVFGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPQRYEQHNPESDQT
Ga0062592_1012233942	3300004480	Soil	MRVDAGVHGVLGTACLVGLSLYVFGAIDWGARGVALFTLLGFVWVLIVLTGLAGANRRATHRYDPRGDERVD*
Ga0062594_1000247854	3300005093	Soil	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPHRYEPNTRESTDQTPPRMA*
Ga0065714_104523941	3300005288	Miscanthus Rhizosphere	MKVDAGVQGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRQHRYERHTEESTDQTPHRMA*
Ga0065704_100861913	3300005289	Switchgrass Rhizosphere	MAEAEKVTLTGFTYEVDAGVHGVLGTTCLVGLSLYVFGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRRPQRYDQRTEERTE*
Ga0065715_101742762	3300005293	Miscanthus Rhizosphere	MKVDAGVHGVLGTACLVGLSLYVFGAIDWGPRGVALFTLLGFVWVLIVLTGLAGDQRRRTYRYDHRTEESAVHSDGEP*
Ga0065705_100348993	3300005294	Switchgrass Rhizosphere	MRVDAGVHGVLGTTCLVGLSLYVFGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRRPQRYDQRTEERTE*
Ga0065705_108292591	3300005294	Switchgrass Rhizosphere	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRQQRYERHTEESTDQTPHRMA*
Ga0066388_1036568052	3300005332	Tropical Forest Soil	MRVDAGVHGVLGTACLVGLSLYVLGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRRQRYEQRPEESAD*
Ga0068869_1001098931	3300005334	Miscanthus Rhizosphere	TCLVGLSLYVFGAIDWGSRGVALFTLLGFVWVLIVLTGLAGEQRRRVQRYDQRPEESAD*
Ga0070682_1009373832	3300005337	Corn Rhizosphere	TCPMKVDAGVQGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRHQRYERHTEESTDQTPHRMA*
Ga0070687_1000284314	3300005343	Switchgrass Rhizosphere	GVLGTTCLVGLSLYVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPHRYEPNTRESTDQTPPRMA*
Ga0070671_1000350682	3300005355	Switchgrass Rhizosphere	MRVDAGVHGVLGIACLVGLSLYVLGFIDWGARGVALFTLCGFVWLLIVITGVAAEQRDRPRRLPQRPDKSESD*
Ga0070667_1007115842	3300005367	Switchgrass Rhizosphere	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRQHRYERHTEESTDQTPHRMA*
Ga0070708_1012472662	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPHRYEPNTRESTDQ
Ga0068867_1019253841	3300005459	Miscanthus Rhizosphere	CTSHMRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRHQRYERHTEESTDQTPHRMA*
Ga0073909_106466871	3300005526	Surface Soil	MRVDAGVHGVLGTACLVGLSLYVLGAIDWGARGVALFTLLGFVWVLIVLTGLIAEQRRRPQGYDRRTEERTE*
Ga0070686_1002806721	3300005544	Switchgrass Rhizosphere	DAGVHGVLGTTCLVGLSLYVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPHRYEPNTRESTDQTPPRMA*
Ga0070704_1016406651	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VLGTTCLVGLSLYVFGAIDWGSRGVALFTLLGFVWVLIVLTGLAGEQRRRVQRYDQRPEESAD*
Ga0068864_1000504591	3300005618	Switchgrass Rhizosphere	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPHRYEPNTRES
Ga0066905_1001420042	3300005713	Tropical Forest Soil	MRVDAGVHGVLGTACLVGLSLYVLGAIDWGARGVALFTLLGFVWVLIVLTGLAGDQRRRQRYEQRPEESAD*
Ga0066905_1020324122	3300005713	Tropical Forest Soil	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRQHPHERHTEESTDQTPHRMA*
Ga0081455_100735653	3300005937	Tabebuia Heterophylla Rhizosphere	MRVDAGVHGVLGTACLVGLSLYVFGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRGPRRNDQHSKERAE*
Ga0066652_1001234222	3300006046	Soil	MRVDAGVHGVLGIACLVGLSLYVLGFIDWGARGIALFTLCGFVWLLVVITGMAAEQRDRSPRRPQRRQEPDPPD*
Ga0066652_1003007131	3300006046	Soil	MRVDRGVHGVLGTTCLVGLSLYTFGAIDWGARGVAFFTLLGFVWVLVVLTGLAAEIRDRSRRRPRADDGAE*
Ga0070715_110169511	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LDMRVDAGVHGVLGIACLVGLSLYVLGFIDWGARGVALFTLCGFVWLLIVITGVAAEQRDRPRRLPQRPDKSESD*
Ga0068871_1000584783	3300006358	Miscanthus Rhizosphere	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRQHRYERHTEESTDQTPHRMA*
Ga0074054_116591502	3300006579	Soil	MRVEGGVHGVLGTTCLVGLSLYTFGAIDWGARGVAFFTLLGFVWMLVVLTGLAAEIRDRPRRRPRADDEGQ*
Ga0079222_112780662	3300006755	Agricultural Soil	RVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRHQRYERHTEESSDQTPHRMA*
Ga0075428_1002068533	3300006844	Populus Rhizosphere	MKVDAGVHGVLGTTCLVGLSLSVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPNRYEPHTRENTDQTPTRMA*
Ga0075428_1020839401	3300006844	Populus Rhizosphere	MRVDAGVHGVLGTACLVGLSLYVFGAIDWGSRGVALFTLLGFVWVLVVLTGLAGEQRRRVQRYEARTEERGE*
Ga0075433_104082782	3300006852	Populus Rhizosphere	MRVDAGVHGILGTACLVGLSLYVFGAIDWGTRGVALFTLLGFVWVLIVLTGLAGTLRRR*
Ga0075425_1000359865	3300006854	Populus Rhizosphere	MRVDAGVHGVLGIACLVGLSLYVLGFIDWGPRGVALFTLCGFVWLLIVITGVAAEQRDRPRRLPQRPDKSESD*
Ga0075434_1008391472	3300006871	Populus Rhizosphere	MRVDAGVHGVLGIACLVGLSLYVLGFIDWGARGIALFTLCGFVWLLVVITGMAAEQRDRPRRMQHRSEKSDSE*
Ga0075419_107053571	3300006969	Populus Rhizosphere	EDESRMKVDAGVHGVLGTTCLVGLSLSVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPNRYEPHTRENTDQTPTRMA*
Ga0099827_110512901	3300009090	Vadose Zone Soil	CALRRKSVRAANMRVESGVHGVLGTTCLVGLSLYTFGAIDWGPRGVAFFTLLGFVWVLVVLTGLAAEIRDPRRRQPRSDDDAQ*
Ga0111539_101545371	3300009094	Populus Rhizosphere	MKVDAGVHGVLGTTCLVGLSLSVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPNRYEPHTRENTDQTPTR
Ga0111539_104357582	3300009094	Populus Rhizosphere	MRVDAGVHGVLGTACLVGLSLYVFGAIDWGSRGVALFTLLGFVWVLVVLTGLAGEQRRRVQRYEARTEERAE*
Ga0075418_107662773	3300009100	Populus Rhizosphere	CLVGLSLYVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPHRYEPNTRESTDQTPPRMA*
Ga0105243_121239601	3300009148	Miscanthus Rhizosphere	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRHQRYERHTEESTDQTPHRMA*
Ga0105242_108873581	3300009176	Miscanthus Rhizosphere	MRVDAGVHGILGTACLVGLSLYVFGAIDWGSRGVALFTLLGFVWVLVVLTGLAGDQRRRTQRYNPPTEERAE*
Ga0126374_103505622	3300009792	Tropical Forest Soil	GILGIVCLVGLTLYVLGVIDWGARGVALFTLLGFVWVLVILTAMSAEQRRQPRHHGRSSEEQASDYDRVR*
Ga0126308_113078301	3300010040	Serpentine Soil	MRVDAGVHGILGITCLVGLSLYVLGVIDWGARGIALFTLCGFVWLLVVVSAVAVEQRENGRRQQKRREERERD*
Ga0126382_103464241	3300010047	Tropical Forest Soil	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRQQQYDRHTEESTDRTPHGMA*
Ga0126372_104443782	3300010360	Tropical Forest Soil	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRPPRYERHTQESADQSPHRMA*
Ga0126372_120740791	3300010360	Tropical Forest Soil	MRVDAGANGILGIVCLVGLTLYVLGVIDWGARGVALFTLLGFVWILVILTALSAEQRRQPRHH
Ga0126377_100488454	3300010362	Tropical Forest Soil	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRQHQYERHTEESSDQTPHGMA*
Ga0126377_102561003	3300010362	Tropical Forest Soil	VHGVLGTACLVGLSLYVLGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRRQRRPEESAD*
Ga0126379_106631532	3300010366	Tropical Forest Soil	MRVDAGVHGVLGIACLVGLSLYVLGFIDWGARGVALFTLCGFVWLLIVITGVAAEQRDRPRRLQQRPDESESD*
Ga0134127_100275654	3300010399	Terrestrial Soil	MRVDAGVHGVLGTSCLVGLSLYVFGAIDWGPRGVALFTLLGFVWVLIVLTGLAGAQRRR*
Ga0137463_13182371	3300011444	Soil	MKVESGVHGVLGTTCLVGLSLYTFGAIDWGARGVAFFTLLGFVWVLVVLTGLAAEIRDRPRRRPRADDAPSE*
Ga0137365_106057892	3300012201	Vadose Zone Soil	MRVDRGVHGVVGTTCLVGLSLYTFGAIDWGARGVAFFTLLGFVWVLVVLTGLAAEIRDRHRRWPRGDDDAQ*
Ga0137374_104545993	3300012204	Vadose Zone Soil	MRVDGGVHGVLGTGCLVGLSLYTLGVIDWGARGVAFFTLLGFVWVLVVLTGLAAEIRDRHRRQPRADDDAQ*
Ga0137381_111879451	3300012207	Vadose Zone Soil	MRVDGGVHGVLGTVCLVGLSLYTFGAIDWGARGVAFFTLLGFVWVLVVLTGLAAEIRDRHRRRPRADDDTH*
Ga0137375_100770222	3300012360	Vadose Zone Soil	MRVDGGVHGVLGTGCLVGLSLYTLGVIDWGARGVAFFTLLGFVWVLVVLTGLAAEIRDRHRQRPRADDDAQ*
Ga0157355_10143501	3300012493	Unplanted Soil	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRHQRYQRHTEESTDQTPHRMA*
Ga0126375_104096062	3300012948	Tropical Forest Soil	MRVDAGVHGVLGTACLVGLSLYVLGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRRQRRPEESAD*
Ga0164299_101739701	3300012958	Soil	MRVDAGVHGVLGIACLVGLSLYVLGFIDWGARGVALFTLCGFVWLLIVITGVAAGQRERPRRLPQRPDKSESD*
Ga0164301_108684331	3300012960	Soil	LGIACLVGLSLYVLGFIDWGARGVALFTLCGFVWLLIVITGFAAEQRDPPPRLQQRPDKSESD*
Ga0164307_119305661	3300012987	Soil	MRVDAGVHGVLGIACLVGLSLYVLGFIDWGARGIALFTLCGFVWLLIVITGVAAEQRDRPRRLPQRPDKSESD*
Ga0164305_114527251	3300012989	Soil	MRVDAGVHGVLGIACLVGLSLYVLGFIDWGARGVALFTLCGFVWLLIVITGVAAEQRDRPRRLQQRPDKSESD*
Ga0157378_105273882	3300013297	Miscanthus Rhizosphere	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRHQRYERHTEESTDQTPHRMA*
Ga0157372_130583432	3300013307	Corn Rhizosphere	MRVDAGVHGVLGIACLVGLSLYVLGFIDWGARGIALFTLCGFVWLLVVITGIAAEQRDRPRRGQ
Ga0157376_109963741	3300014969	Miscanthus Rhizosphere	WTALFICTCPMRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRHQRYERHTEESTDQTPHRMA*
Ga0157376_113270322	3300014969	Miscanthus Rhizosphere	MKVDAGVQGVLGTTCLVGLSLYVLGAIDCGSRGIALFTLLGFVWVLIVLTGLAAEQRRRQHRYERHTEESTDQTPHRMA*
Ga0132256_1005757911	3300015372	Arabidopsis Rhizosphere	MKVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRHQRYERHTEESTDQTPHRMA*
Ga0132257_1012778322	3300015373	Arabidopsis Rhizosphere	MKVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRQHRYERHTEESTDQTPHRMA*
Ga0184628_100125945	3300018083	Groundwater Sediment	MRVEGGVHGVLGTTCLVGLSLYTFGAIDWGARGVAFFTLLGFVWMLVVLTGLAAEIRDRPRRQPRSDDEGQ
Ga0207653_100592812	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MKVDAGVQGVLGTTCLVGLSVYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRQHRYERHTEESTDQTPHRMA
Ga0207682_104905431	3300025893	Miscanthus Rhizosphere	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRHQRYERHTEESTDQTPHRMA
Ga0207688_102323202	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPHRYEPNTRESTDQTPPRMA
Ga0207643_100318193	3300025908	Miscanthus Rhizosphere	MRVDAGVHGVLGTTCLVGLSLYVFGAIDWGSRGVALFTLLGFVWVLIVLTGLAGEQRRRVQRYDQRPEESAD
Ga0207662_100170941	3300025918	Switchgrass Rhizosphere	DAGVHGVLGTTCLVGLSLYVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPHRYEPNTRESTDQTPPRMA
Ga0207646_110944492	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRVDAGVHGVLGTTCLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRQHRYERHTEESTDQTPHRMA
Ga0207644_101968632	3300025931	Switchgrass Rhizosphere	MRVDAGVHGVLGIACLVGLSLYVLGFIDWGARGVALFTLCGFVWLLIVITGVAAEQRDRPRRLPQRPDKSESD
Ga0207679_114009141	3300025945	Corn Rhizosphere	TSVRAMRVDAGVHGVLGTACLVGLSLYVFGAIDWGARGVALFTLLGFVWVLIVLTGLAGANRRATHRYDPRGDERVD
Ga0207651_109690041	3300025960	Switchgrass Rhizosphere	MRVDAGVHGVLGIACLVGLSLYVLGFIDWGARGIALFTLCGFVWLLVVITGIAAEQRDRPRRGQHHPNESEPD
Ga0207641_103229291	3300026088	Switchgrass Rhizosphere	TAVLDMRVDAGVHGVLGIACLVGLSLYVLGFIDWGARGVALFTLCGFVWLLIVITGVAAEQRDRPRRLPQRPDKSESD
Ga0207674_112249961	3300026116	Corn Rhizosphere	MRVDAGVHGVLGTACLVGLSLYVFGAIDWGARGVALFTLLGFVWVLIVLTGLAGANRRATHRYDPRGDERVD
Ga0209814_102260671	3300027873	Populus Rhizosphere	MRVDAGVHGVLGTACLVGLSLYVLGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRRQRYEQRPEESAD
Ga0209481_100425684	3300027880	Populus Rhizosphere	EDESRMKVDAGVHGVLGTTCLVGLSLSVLGAIDWGSRGVALFTLLGFVWVLIVLTGLAAEQRRRPHRYEPNTRESTDQTPPRMA
Ga0307281_100492981	3300028803	Soil	MRVEGGVHGVLGTTCLVGLSLYTFGAIDWGARGVAFFTLLGFVWMLVVLTGLAAEIRDRPRRRPRADDEGQ
Ga0307497_103447521	3300031226	Soil	VRVEGGVHGVLGTTCLVGLSLYTFGAIDWGARGVAFFTLLGFVWMLVVLTGLAAEIRDRPRRRPPADDEGQ
Ga0170824_1106350761	3300031231	Forest Soil	MRVEGGVHGVLGTTCLVGLSLYTFGAIDWGARGVAFFTLLGFVWVLVVLAGLATEIRDRPRRRPRTDDD
Ga0307468_1012961883	3300031740	Hardwood Forest Soil	MRVDAGVHGVLGTACLVGLSLYVLGAIDWGARGVALFTLLGFVWVLIVLTGLAGEQRRRQRYEQRPEES
Ga0307468_1015203321	3300031740	Hardwood Forest Soil	MRVDAGVHGVLGTACLVGLSLYVFGAIDWGSRGVALFTLLGFVWVLVVLTGLAGEQRRRVQRYEASTEERAE
Ga0307471_1026641021	3300032180	Hardwood Forest Soil	DAGVHGVLGTACLVGLSLYVLGAIDWGARGVALFTLLGFVWVLIVLTGLIAEQRRRPQGYDRRTEERTD
Ga0310812_102192702	3300032421	Soil	MRVDAGVHGVLGTACLVGLSLYVLGAIDWGSRGIALFTLLGFVWVLIVLTGLAAEQRRRQHRYERHTEESTDQTPH
Ga0326726_103608761	3300033433	Peat Soil	MRVDGGVHGVLGTVCLVGLSLYTFGAIDWGARGVAFFTLLGFVWMLVVLTGLAAEIRDRHRRRPRADDDSQ
Ga0326726_112870741	3300033433	Peat Soil	RVANMRVDSGVHGVLGTVCLVGLSLYTFGAIDWGARGVAFFTLLGFVWMLVVLTGLAAEIRDRHRRRPRADDDTHTE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101919

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences