Metagenome / Metatranscriptome Family F101894

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F101894
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	75 residues
Representative Sequence	MKFNVTFKVAWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Number of Associated Samples	79
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	38.24 %
% of genes from short scaffolds (< 2000 bps)	80.39 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (69.608 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (41.176 % of family members)
Environment Ontology (ENVO)	Unclassified (81.373 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (91.176 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.67% β-sheet: 33.33% Coil/Unstructured: 36.00%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00206	Lyase_1	20.59
PF13787	HXXEE	9.80
PF13467	RHH_4	3.92
PF05656	DUF805	3.92
PF02511	Thy1	2.94
PF12826	HHH_2	1.96
PF12680	SnoaL_2	1.96
PF01641	SelR	1.96
PF00580	UvrD-helicase	0.98
PF10415	FumaraseC_C	0.98
PF12221	HflK_N	0.98
PF00717	Peptidase_S24	0.98
PF14373	Imm_superinfect	0.98
PF12705	PDDEXK_1	0.98
PF13361	UvrD_C	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	3.92
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	2.94
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	1.96
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.98
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.98
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.59 %
Unclassified	root	N/A	29.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.59 %
Unclassified	root	N/A	29.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.61 %
Unclassified	root	N/A	29.41 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.78 %
Unclassified	root	N/A	29.41 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	42.16 %
Unclassified	root	N/A	29.41 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	21.57 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.98 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	16.67 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	0.98 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.98 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
unclassified Pelagibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae	7.84 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	7.84 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.98 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.98 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Pelagibacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	7.84 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	7.84 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.98 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.98 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Pelagibacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	7.84 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	7.84 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.98 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.98 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10017723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4262	Open in IMG/M
3300000115\|DelMOSum2011_c10203000	Not Available	551	Open in IMG/M
3300000149\|LPaug09P1610mDRAFT_c1000463	All Organisms → cellular organisms → Bacteria → Proteobacteria	7380	Open in IMG/M
3300000168\|LPjun09P1210mDRAFT_c1003490	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300000223\|LPjun09P410mDRAFT_1010158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	818	Open in IMG/M
3300001941\|GOS2219_1030266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1405	Open in IMG/M
3300001947\|GOS2218_1002178	Not Available	567	Open in IMG/M
3300002040\|GOScombined01_100714338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1997	Open in IMG/M
3300002153\|JGI24540J26637_10033902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1863	Open in IMG/M
3300005239\|Ga0073579_1004483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1104	Open in IMG/M
3300005239\|Ga0073579_1191423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	443867	Open in IMG/M
3300005239\|Ga0073579_1191534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	355786	Open in IMG/M
3300006164\|Ga0075441_10075343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1311	Open in IMG/M
3300006190\|Ga0075446_10051587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1273	Open in IMG/M
3300006352\|Ga0075448_10004294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4711	Open in IMG/M
3300006947\|Ga0075444_10058945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1786	Open in IMG/M
3300006947\|Ga0075444_10157311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	948	Open in IMG/M
3300006947\|Ga0075444_10183992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	854	Open in IMG/M
3300007229\|Ga0075468_10056201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1325	Open in IMG/M
3300009058\|Ga0102854_1253043	Not Available	506	Open in IMG/M
3300009071\|Ga0115566_10837986	Not Available	504	Open in IMG/M
3300009172\|Ga0114995_10174217	Not Available	1198	Open in IMG/M
3300009420\|Ga0114994_10044506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3077	Open in IMG/M
3300009420\|Ga0114994_10182236	All Organisms → cellular organisms → Bacteria → Proteobacteria	1417	Open in IMG/M
3300009420\|Ga0114994_10480282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	820	Open in IMG/M
3300009420\|Ga0114994_10751101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	635	Open in IMG/M
3300009422\|Ga0114998_10344262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	697	Open in IMG/M
3300009425\|Ga0114997_10426488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	714	Open in IMG/M
3300009425\|Ga0114997_10623554	Not Available	567	Open in IMG/M
3300009526\|Ga0115004_10219015	Not Available	1137	Open in IMG/M
3300009705\|Ga0115000_10060030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2590	Open in IMG/M
3300009785\|Ga0115001_10162883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1452	Open in IMG/M
3300017725\|Ga0181398_1004582	All Organisms → cellular organisms → Bacteria → Proteobacteria	3694	Open in IMG/M
3300017725\|Ga0181398_1037136	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300017749\|Ga0181392_1031089	All Organisms → cellular organisms → Bacteria → Proteobacteria	1679	Open in IMG/M
3300017781\|Ga0181423_1160079	Not Available	864	Open in IMG/M
3300017786\|Ga0181424_10032650	All Organisms → cellular organisms → Bacteria	2259	Open in IMG/M
3300020268\|Ga0211495_1080631	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300020276\|Ga0211509_1105497	Not Available	639	Open in IMG/M
3300020304\|Ga0211684_1005090	All Organisms → cellular organisms → Bacteria → Proteobacteria	2183	Open in IMG/M
3300020305\|Ga0211513_1041118	Not Available	706	Open in IMG/M
3300020335\|Ga0211690_1104244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	608	Open in IMG/M
3300020349\|Ga0211511_1017734	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1915	Open in IMG/M
3300020358\|Ga0211689_1087743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	886	Open in IMG/M
3300020363\|Ga0211493_1027195	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300020374\|Ga0211477_10175443	Not Available	756	Open in IMG/M
3300020374\|Ga0211477_10212218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	673	Open in IMG/M
3300020374\|Ga0211477_10216209	Not Available	665	Open in IMG/M
3300020376\|Ga0211682_10002658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	8483	Open in IMG/M
3300020381\|Ga0211476_10121109	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300020381\|Ga0211476_10147968	Not Available	851	Open in IMG/M
3300020381\|Ga0211476_10291131	Not Available	557	Open in IMG/M
3300020385\|Ga0211677_10094116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	1315	Open in IMG/M
3300020388\|Ga0211678_10004988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8585	Open in IMG/M
3300020391\|Ga0211675_10079709	Not Available	1526	Open in IMG/M
3300020391\|Ga0211675_10084259	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300020391\|Ga0211675_10189087	Not Available	903	Open in IMG/M
3300020396\|Ga0211687_10012568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4699	Open in IMG/M
3300020413\|Ga0211516_10233975	Not Available	837	Open in IMG/M
3300020431\|Ga0211554_10029789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3164	Open in IMG/M
3300020431\|Ga0211554_10154626	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300020440\|Ga0211518_10263070	Not Available	826	Open in IMG/M
3300020440\|Ga0211518_10284178	All Organisms → cellular organisms → Bacteria → Proteobacteria	787	Open in IMG/M
3300020452\|Ga0211545_10246379	Not Available	821	Open in IMG/M
3300020462\|Ga0211546_10067706	Not Available	1742	Open in IMG/M
3300020463\|Ga0211676_10123735	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300020463\|Ga0211676_10199674	Not Available	1210	Open in IMG/M
3300020463\|Ga0211676_10496309	Not Available	646	Open in IMG/M
3300020469\|Ga0211577_10095689	All Organisms → cellular organisms → Bacteria	2068	Open in IMG/M
3300022074\|Ga0224906_1203155	Not Available	540	Open in IMG/M
3300024192\|Ga0228637_1110351	Not Available	544	Open in IMG/M
3300024237\|Ga0228653_1127963	Not Available	530	Open in IMG/M
3300024322\|Ga0228656_1058028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	856	Open in IMG/M
3300024326\|Ga0228652_1106420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	640	Open in IMG/M
3300026462\|Ga0247568_1105596	Not Available	553	Open in IMG/M
3300026491\|Ga0228641_1009443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2761	Open in IMG/M
3300026491\|Ga0228641_1073273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300026491\|Ga0228641_1081992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	722	Open in IMG/M
3300026506\|Ga0228604_1081841	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300027522\|Ga0209384_1014812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2624	Open in IMG/M
3300027522\|Ga0209384_1067756	All Organisms → cellular organisms → Bacteria → Proteobacteria	914	Open in IMG/M
3300027668\|Ga0209482_1001602	All Organisms → cellular organisms → Bacteria → Proteobacteria	15200	Open in IMG/M
3300027672\|Ga0209383_1091765	Not Available	1031	Open in IMG/M
3300027687\|Ga0209710_1277340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	529	Open in IMG/M
3300027779\|Ga0209709_10007264	All Organisms → cellular organisms → Bacteria → Proteobacteria	8382	Open in IMG/M
3300027801\|Ga0209091_10265207	All Organisms → cellular organisms → Bacteria → Proteobacteria	828	Open in IMG/M
3300027827\|Ga0209035_10376893	Not Available	698	Open in IMG/M
3300028132\|Ga0228649_1078831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	843	Open in IMG/M
3300028133\|Ga0228609_1103526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300028194\|Ga0257106_1039882	All Organisms → cellular organisms → Bacteria → Proteobacteria	1809	Open in IMG/M
3300028197\|Ga0257110_1073108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	1466	Open in IMG/M
3300028397\|Ga0228639_1067362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	964	Open in IMG/M
3300028397\|Ga0228639_1078267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	867	Open in IMG/M
3300031510\|Ga0308010_1180565	Not Available	772	Open in IMG/M
3300031588\|Ga0302137_1003583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7055	Open in IMG/M
3300031597\|Ga0302116_1122777	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300031599\|Ga0308007_10035183	All Organisms → cellular organisms → Bacteria → Proteobacteria	1926	Open in IMG/M
3300031630\|Ga0308004_10285979	Not Available	641	Open in IMG/M
3300031639\|Ga0302117_10173728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	906	Open in IMG/M
3300031721\|Ga0308013_10164721	All Organisms → cellular organisms → Bacteria → Proteobacteria	834	Open in IMG/M
3300031851\|Ga0315320_10746837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	622	Open in IMG/M
3300032073\|Ga0315315_10544456	All Organisms → cellular organisms → Bacteria → Proteobacteria	1074	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	45.10%
Oceanic	Environmental → Aquatic → Marine → Oceanic	26.47%
Coastal	Environmental → Aquatic → Marine → Coastal	13.73%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.88%
Strait	Environmental → Aquatic → Marine → Strait	5.88%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.96%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	45.10%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	23.53%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	13.73%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	4.90%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.94%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.96%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.98%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	41.18%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	18.63%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	12.75%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	5.88%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	4.90%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.92%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	2.94%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.94%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.96%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.96%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.98%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.98%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000149	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 10m	Environmental	Open in IMG/M
3300000168	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 10m	Environmental	Open in IMG/M
3300000223	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P4 10m	Environmental	Open in IMG/M
3300001941	Marine microbial communities from Browns Bank, Gulf of Maine - GS003	Environmental	Open in IMG/M
3300001947	Marine microbial communities from the Gulf of Maine, Canada - GS002	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300002153	Marine eukaryotic phytoplankton communities from the Norwegian Sea - 20m ARK-7M Metagenome	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300009058	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300020268	Marine microbial communities from Tara Oceans - TARA_B000000477 (ERX556113-ERR599107)	Environmental	Open in IMG/M
3300020276	Marine microbial communities from Tara Oceans - TARA_E500000075 (ERX289007-ERR315858)	Environmental	Open in IMG/M
3300020304	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556110-ERR599176)	Environmental	Open in IMG/M
3300020305	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX556024-ERR599003)	Environmental	Open in IMG/M
3300020335	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX556030-ERR599035)	Environmental	Open in IMG/M
3300020349	Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289006-ERR315859)	Environmental	Open in IMG/M
3300020358	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX555925-ERR599009)	Environmental	Open in IMG/M
3300020363	Marine microbial communities from Tara Oceans - TARA_B000000475 (ERX555958-ERR599173)	Environmental	Open in IMG/M
3300020374	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)	Environmental	Open in IMG/M
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental	Open in IMG/M
3300020381	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020391	Marine microbial communities from Tara Oceans - TARA_B100000989 (ERX556130-ERR598967)	Environmental	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020431	Marine microbial communities from Tara Oceans - TARA_B100001142 (ERX556101-ERR598983)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300024192	Seawater microbial communities from Monterey Bay, California, United States - 47D	Environmental	Open in IMG/M
3300024237	Seawater microbial communities from Monterey Bay, California, United States - 65D	Environmental	Open in IMG/M
3300024322	Seawater microbial communities from Monterey Bay, California, United States - 68D	Environmental	Open in IMG/M
3300024326	Seawater microbial communities from Monterey Bay, California, United States - 64D	Environmental	Open in IMG/M
3300026462	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 17R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026491	Seawater microbial communities from Monterey Bay, California, United States - 52D	Environmental	Open in IMG/M
3300026506	Seawater microbial communities from Monterey Bay, California, United States - 4D	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027827	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300028132	Seawater microbial communities from Monterey Bay, California, United States - 61D	Environmental	Open in IMG/M
3300028133	Seawater microbial communities from Monterey Bay, California, United States - 10D	Environmental	Open in IMG/M
3300028194	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m	Environmental	Open in IMG/M
3300028197	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m	Environmental	Open in IMG/M
3300028397	Seawater microbial communities from Monterey Bay, California, United States - 50D	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031588	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCM	Environmental	Open in IMG/M
3300031597	Marine microbial communities from Western Arctic Ocean, Canada - AG5_SCM	Environmental	Open in IMG/M
3300031599	Marine microbial communities from water near the shore, Antarctic Ocean - #71	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031639	Marine microbial communities from Western Arctic Ocean, Canada - AG5_32.2	Environmental	Open in IMG/M
3300031721	Marine microbial communities from water near the shore, Antarctic Ocean - #181	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100177231	3300000101	Marine	MKFNVTFKVIWDDDYEFIDFEFDSKDLESLHRNIKTSIDEKYLEPERNITKTIKGEVTITYTS
DelMOSum2011_102030002	3300000115	Marine	MKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDITKTIKGEVTITYTSIKDSMGNEIYNK*
LPaug09P1610mDRAFT_10004635	3300000149	Marine	MKFNVTFKVEWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV*
LPjun09P1210mDRAFT_10034902	3300000168	Marine	MKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDIKKTINGEVTITYTSIKDSMGNEIYTK*
LPjun09P410mDRAFT_10101582	3300000223	Marine	MKFNVTFKVEWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDPSGKELYSV*
GOS2219_10302664	3300001941	Marine	MKFNVTFKVIWDDDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDIKKIIKGEVTITYTSIKDSMGNEIYTK*
GOS2218_10021782	3300001947	Marine	MKFNVTFKVAWDDDYEFVVFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELY
GOScombined01_1007143383	3300002040	Marine	MKFNVTFKVIWDGDYELIDFEFDSKDLESLHRNIKTAIDEKYLEPERDIKKIIKGEVTITYTSIKDSMGNEIYTK*
JGI24540J26637_100339024	3300002153	Marine	MKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDIXKTIKGEVTITYTSIKDSMGNEIYNK*
Ga0073579_10044833	3300005239	Marine	MKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDENYLEPERKIKKFIKGKITVNYTLIVDSLGVKVYSI*
Ga0073579_1191423272	3300005239	Marine	MKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDIKKTIKGEVTITYTSIKDSMGNEIYTK*
Ga0073579_1191534274	3300005239	Marine	MKFNVTFKVAWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV*
Ga0075441_100753431	3300006164	Marine	MKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIKKPIKGKVTITYTSIKDSLGKEVYLK*
Ga0075446_100515874	3300006190	Marine	MKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIKKPIKGKVTITYTSIKDTLGKEVYLK*
Ga0075448_100042946	3300006352	Marine	MKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIKKPIKGKITITYTSIKDSLGKEVYLK*
Ga0075444_100589453	3300006947	Marine	MKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIKKPIKGKVTITYTSIKVTLGKEVYLK*
Ga0075444_101573113	3300006947	Marine	VNYKYYSNKIMKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDIKKTINGEVTITYTSIKDSMGNEIYTK*
Ga0075444_101839923	3300006947	Marine	KVNYKYYSNEFMKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIKKPIKGKVTITYTSIKDSLGKEVYLK*
Ga0075468_100562014	3300007229	Aqueous	MKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDITKTIKGEVTITYTSIKDSMGNEIYTK*
Ga0102854_12530431	3300009058	Estuarine	VNYKYYNNDFMKFNVTFKVEWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDPSGKELYSV*
Ga0115566_108379862	3300009071	Pelagic Marine	VNYKYYNNDFMKFNVTFKVAWDDDYEFVVFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV*
Ga0114995_101742171	3300009172	Marine	KIMKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDITKTIKGEVTITYTSIKDSMGNEIYTK*
Ga0114994_100445064	3300009420	Marine	MKFNVTFKVTWDTDYELVDFEFDSKNLETLHRNIKVAIDENYLEPERNVKKPINGKTAITYTSIKDLSGKELYSA*
Ga0114994_101822362	3300009420	Marine	VNYKYYSNEFMKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIIKPIKGKVTITYTSIKDSLGKEVYLK*
Ga0114994_104802823	3300009420	Marine	SNKIMKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDIKKTINGEVTITYTSIKDSMGNEIYTK*
Ga0114994_107511012	3300009420	Marine	SNKIMKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDITKTIKGEVTITYTSIKDSMGNEIYTK*
Ga0114998_103442621	3300009422	Marine	SNKIMKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDIKKTIKGEVTITYTSIKDSMGNEIYTK*
Ga0114997_104264883	3300009425	Marine	GFKVNYKYYSNEFMKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIIKPIKGKVTITYTSIKDSLGKEVYLK*
Ga0114997_106235541	3300009425	Marine	GFKVNYKYYSNEFMKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHINIKTAIDENYLEPERDIKKPIKGKVTITYTSIKDSLGKEVYLK*
Ga0115004_102190152	3300009526	Marine	MKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKIAIDENYLEPERDIKKPIKGKVTITYTSIKDSLGKEVYLK*
Ga0115000_100600303	3300009705	Marine	MKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIIKPIKGKVTITYTSIKDSLGKEVYLK*
Ga0115001_101628831	3300009785	Marine	YYSNKIMKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDENYLEPERKIKKFIKGKITVSYTSIVDSLGVKVYSI*
Ga0181398_10045824	3300017725	Seawater	MKFNVTFKVAWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDPSGKELYSV
Ga0181398_10371364	3300017725	Seawater	MKFNVTFKVAWDDDYEFVVFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSI
Ga0181392_10310893	3300017749	Seawater	VNYKYYNNDFMKFNVTFKVAWDDDYEFVVFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0181423_11600793	3300017781	Seawater	FNVTFKVAWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0181424_100326502	3300017786	Seawater	MKFNVTFKVAWDGDYEFVDFEFDSKDLKTLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0211495_10806311	3300020268	Marine	DYEFIDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0211509_11054972	3300020276	Marine	MKFLVTFKVEWGDDHEFVDFEFDSKDLESLHKNIKLAIAENYLEPERDIKKTIKGKIQTTCILVKDSTGKKVYSI
Ga0211684_10050904	3300020304	Marine	MKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIKKPIKGKVTITYTSIKDSLGKEVYLK
Ga0211513_10411181	3300020305	Marine	MKFLVTFKVEWDDDHEFVDFEFDSKNLESLHNNIKLAIAENYLEPERDIKKTITGRIQTTCILVKDSTGKKVYSI
Ga0211690_11042442	3300020335	Marine	KVAWDDDYEFIDLEFDSQDLESLHRNIKTAIDEKYLEPERDIKKTIKGEVTITYTSIKDSMGNEIYTK
Ga0211511_10177343	3300020349	Marine	MKFLVTFKVEWDDDHEFVDFEFDSKDLETLHKNIQLAIAENYLEPERDIKKTITGRIQTTCILVKDSTGKKVYSI
Ga0211689_10877432	3300020358	Marine	MKFNVTFKVAWDDDYEFIDLEFDSQDLESLHRNIKTAIDEKYLEPERDIKKAMNGEITITYTSIKDSLGNEIYTN
Ga0211493_10271952	3300020363	Marine	MKFNVTFKVAWDNDHEFIDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0211477_101754431	3300020374	Marine	MKFLVTFKVQWDDDHEFVDFEFDSKDLETLHKNIKLAIAENYLEPERDIKKTIRGKVQTTYISIKDSSGKKVYSKH
Ga0211477_102122182	3300020374	Marine	VTFKVEWDDDHEFVDFEFDSKDLETLHKNIKLAIAENYLEPERDIKKAISGKVITRCTSIKDNTGTEVYSLKST
Ga0211477_102162092	3300020374	Marine	KFLVTFKVEWDDDHEFVDFEFDSKDLDTLHKNIQLAIAENYLEPEREIKKSITGKTTTSYTSIKDLSGKELYSV
Ga0211682_100026582	3300020376	Marine	MKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHINIKTAIDENYLEPERDIKKPIKGKVTITYTSIKDSLGKEVYLK
Ga0211476_101211092	3300020381	Marine	MKFIVTFKVEWDDDHEFVDFEFDSKDLETLHKNIKLAIAENYLEPERDIKKAISGKVITRCTSIKDNTGTEVYSLKST
Ga0211476_101479682	3300020381	Marine	MKFLVTFKVEWDDDHEFVDFEFDSKNLESLHKNIKLAMAENYLEPERDIKKTIKGKIQTTCILVKDSTGKKVYS
Ga0211476_102911311	3300020381	Marine	MKFLVTFKVEWDDDHEFVDFEFDSKDLETLHKNIQLAIAENYLEPEREIKKSITGKTTTSYTSIKDLSGKELYSV
Ga0211677_100941161	3300020385	Marine	MKFNVTFKVAWDDDCEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0211678_100049888	3300020388	Marine	MKFNVTFKVAWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0211675_100797091	3300020391	Marine	MKFLVTFKVEWDDDHEFVDFEFDSKDLETLHKNIKLAIAENYLEPERDIKKTINGKVITRCTSIKDNTGTEVYSL
Ga0211675_100842593	3300020391	Marine	MKFLVTFKVEWDDDHEFVDFEFDSKDLETLHKNIQLAIAENYLEPEREIKKSITGKTTTSYTLIRDLSGKELYSV
Ga0211675_101890872	3300020391	Marine	FKVEWDDDHEFVDFEFDSKDLETLHKNIKLAIAENYLEPERDIKKTISGKVITRCISIKDNTGTEVYSL
Ga0211687_100125685	3300020396	Marine	VKCKYYTNEFMKFNVTFKVAWDDDYEFIDLEFDSQDLESLHRNIKTAIDEKYLEPERDIKKAMNGEITITYTSIKDSLGNEIYTN
Ga0211516_102339752	3300020413	Marine	MKFLVTFKVEWDDDHEFVDFVFDSKNLESLHKNIKLAIAENYLEPERDIKKTIKGKIQTTCILVKDSTG
Ga0211554_100297894	3300020431	Marine	MKFNVTFKVAWDDDYEFVVFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0211554_101546261	3300020431	Marine	MKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDITKTIKGEVTITYTSIKDSMGNEIYTK
Ga0211518_102630701	3300020440	Marine	KFLVTFKVEWDDDHEFVDFEFDSKDLETLHKNIKLAIAENYLEPERDIKKAISGKVITRCTSIKDNTGTEVYSLKST
Ga0211518_102841782	3300020440	Marine	MKFLVTFKVEWDDDHEFVDFEFDSKDLETLHKNIQLAIAENYLEPEREIKKCIKGKTTTSYTSIKDLSGKELYSV
Ga0211545_102463791	3300020452	Marine	MKFLVTFKVEWDDDHEFVDFEFDSKNLESLHKNIKLAIAENYLEPERDIKKTIKGKIQTTCILVKDSTGKKVYSI
Ga0211546_100677061	3300020462	Marine	MKFLVTFKVEWDDDHEFVDFEFDSKNLESLHNNIKLAIAENYLEPERDIKKTITGRIQTTCILVKDS
Ga0211676_101237353	3300020463	Marine	MKFLVTFKVEWDDDHEFVDFEFDSKDLETLHKNIKLAIAENYLEPERDIKKTITGKIITTCTSIKDSSGKVVC
Ga0211676_101996743	3300020463	Marine	MKFLVTFKVEWDDDHEFVDFEFDSKNLESLHKNIKLAISENYLEPERDIKKTIKGKIQTKCILIRDIEDKVVFSL
Ga0211676_104963091	3300020463	Marine	LVTFKVEWDDDHEFVDFEFDSKDLETLHKNIKLAIEEDYLEPERDIKKTIKGKIKISYTSIKDLTGKVLYFV
Ga0211577_100956892	3300020469	Marine	MKFLVTFKVEWDDDHEFVDFVFDSKDLKTLHKNIKLAIQENYLEPERDIKKTIKGETQITYISIKDNTGKEVFSL
Ga0224906_12031551	3300022074	Seawater	FKVEWDDDHEFVDFEFDSKNLESLHNNIKLAIAENYLEPERDIKKTITGRIQTTCILVKDSTGKKVYSI
Ga0228637_11103512	3300024192	Seawater	MKFNVTFKVAWDDDCEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKEL
Ga0228653_11279631	3300024237	Seawater	MKFYVTFKVEWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0228656_10580282	3300024322	Seawater	FNVTFKVEWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0228652_11064201	3300024326	Seawater	MKFTVTFKVAWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYISIKDLTGKELYSV
Ga0247568_11055962	3300026462	Seawater	TNDFMKFNVTFKVAWDDDCEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0228641_10094431	3300026491	Seawater	MKFNVTFKVAWDDDCEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYT
Ga0228641_10732731	3300026491	Seawater	MKFNVTFKVAWDDDYEFVVFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKEL
Ga0228641_10819922	3300026491	Seawater	YVTFKVEWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDPSGKELYSV
Ga0228604_10818411	3300026506	Seawater	MKFNVTFKVAWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDL
Ga0209384_10148124	3300027522	Marine	MKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIKKPIKGKVTITYTSIKDTLGKEVYLK
Ga0209384_10677563	3300027522	Marine	IMKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDIKKTINGEVTITYTSIKDSMGNEIYTK
Ga0209482_100160214	3300027668	Marine	MKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIKKPIKGKITITYTSIKDSLGKEVYLK
Ga0209383_10917652	3300027672	Marine	MKFNVTFKVIWDGDHEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDITKTVNGEVTITYTSIKDSMGNEIYTK
Ga0209710_12773402	3300027687	Marine	MKFNVTFKVTWDTDYELVDFEFDSKNLETLHRNIKVAIDENYLEPERNVKKPINGKTAITYTSIKDLSGKELYSA
Ga0209709_100072643	3300027779	Marine	MKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIIKPIKGKVTITYTSIKDSLGKEVYLK
Ga0209091_102652073	3300027801	Marine	FGFKVNYKYYSNEFMKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIIKPIKGKVTITYTSIKDSLGKEVYLK
Ga0209035_103768932	3300027827	Marine	MKFNVTFKVAWDDDYEFIDLEFDSKDLESLHRNIKTAIDEKYLEPERDIKKTINGEVTITYTSIKDSMGNEIYTK
Ga0228649_10788312	3300028132	Seawater	MKFNVTFKVAWDDDCEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDPSGKELYSV
Ga0228609_11035263	3300028133	Seawater	MKFNVTFKVAWDDDYEFVVFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSG
Ga0257106_10398824	3300028194	Marine	MKFNVTFKVEWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0257110_10731083	3300028197	Marine	MKFNVTFKVEWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDPSGKELYSV
Ga0228639_10673622	3300028397	Seawater	YKYYTNDFMKFNVTFKVAWDDDCEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0228639_10782671	3300028397	Seawater	YYNNDFMKFNVTFKVAWDDDYEFVVFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0308010_11805652	3300031510	Marine	MKFNVTFKVIWDGDHEFVDFEFDSKDLESLHRNIKTAIDEKYLEPERDITKTIKGEVTITYTSIKDSMGNEIYTK
Ga0302137_10035833	3300031588	Marine	MKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDIKKTINGEVTITYTSIKDSMGNEIYTK
Ga0302116_11227771	3300031597	Marine	YSNKIMKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDIKKTINGEVTITYTSIKDSMGNEIYTK
Ga0308007_100351834	3300031599	Marine	MKFNVTFKVIWDGDHEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDITKTIKGEVTITYTSIKDSMGNEIYTK
Ga0308004_102859792	3300031630	Marine	VNYKYYSNEFMKFNVTFKVAWDGDHEFVDFGFDSKDLDTLHRNIKTAIDENYLEPERDIKKPIKGKITITYTSIKDSLGKEVYLK
Ga0302117_101737282	3300031639	Marine	VNYKYYSNKIMKFNVTFKVIWDGDYEFIDFEFDSKDLESLHRNIKTAIDEKYLEPERDIKKTINGEVTITYTSIKDSMGNEIYTK
Ga0308013_101647213	3300031721	Marine	SNKIMKFNVTFKVIWDGDHEFVDFEFDSKDLESLHRNIKTAIDEKYLEPERDITKTIKGEVTITYTSIKDSMGNEIYTK
Ga0315320_107468372	3300031851	Seawater	YYNNVFMKFNVTFKVAWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV
Ga0315315_105444562	3300032073	Seawater	MKFIVTFKVAWDDDYEFVDFEFDSKDLETLHKNIKLAIEENYLEPERDIKKSIKGKTTISYTSIKDLSGKELYSV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101894

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences