Metagenome Family F101884

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101884
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	47 residues
Representative Sequence	MNIDINTTITFDNLLSAKKRITQHIGGTRSGKTYAILQYLIVKALQ
Number of Associated Samples	90
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	25.49 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.20 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (40.196 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (42.157 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.84% β-sheet: 0.00% Coil/Unstructured: 62.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01165	Ribosomal_S21	10.78
PF01555	N6_N4_Mtase	7.84
PF01467	CTP_transf_like	3.92
PF13392	HNH_3	2.94
PF13673	Acetyltransf_10	1.96
PF01541	GIY-YIG	0.98
PF02954	HTH_8	0.98
PF13455	MUG113	0.98
PF00856	SET	0.98
PF07453	NUMOD1	0.98
PF04466	Terminase_3	0.98
PF04542	Sigma70_r2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	10.78
COG0863	DNA modification methylase	Replication, recombination and repair [L]	7.84
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	7.84
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	7.84
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.98
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.98
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.98
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	0.98
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.80 %
Unclassified	root	N/A	40.20 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	48.04 %
Unclassified	root	N/A	40.20 %
cellular organisms	root	All Organisms → cellular organisms	11.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.49 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	22.55 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.78 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.49 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	22.55 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.98 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.49 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	22.55 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.96 %
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	0.98 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.49 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	22.55 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.94 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.96 %
Spirochaetes bacterium ADurb.Bin133	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin133	0.98 %
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.49 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	22.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	0.98 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.98 %
Spirochaetes bacterium ADurb.Bin133	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin133	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.49 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	22.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	0.98 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.98 %
Spirochaetes bacterium ADurb.Bin133	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin133	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.49 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	22.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Methanobrevibacter	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter	0.98 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.98 %
Spirochaetes bacterium ADurb.Bin133	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin133	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.49 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	22.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
unclassified Methanobrevibacter	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter	0.98 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.98 %
Spirochaetes bacterium ADurb.Bin133	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin133	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.49 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	22.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Flavobacteriaceae bacterium TMED42	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED42	0.98 %
Methanobrevibacter sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	0.98 %
Spirochaetes bacterium ADurb.Bin133	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin133	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10241566	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	574	Open in IMG/M
3300000116\|DelMOSpr2010_c10119188	Not Available	956	Open in IMG/M
3300000116\|DelMOSpr2010_c10232470	Not Available	571	Open in IMG/M
3300001346\|JGI20151J14362_10050098	All Organisms → Viruses → Predicted Viral	1827	Open in IMG/M
3300002294\|B570J29584_1012322	Not Available	534	Open in IMG/M
3300002835\|B570J40625_100734516	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	878	Open in IMG/M
3300004124\|Ga0066178_10252159	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	513	Open in IMG/M
3300005086\|Ga0072334_11188062	Not Available	500	Open in IMG/M
3300005527\|Ga0068876_10512704	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300005581\|Ga0049081_10070754	All Organisms → Viruses → Predicted Viral	1312	Open in IMG/M
3300006164\|Ga0075441_10131103	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	951	Open in IMG/M
3300006191\|Ga0075447_10154270	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	770	Open in IMG/M
3300006790\|Ga0098074_1128417	Not Available	658	Open in IMG/M
3300006790\|Ga0098074_1173418	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300006793\|Ga0098055_1013972	All Organisms → Viruses → Predicted Viral	3536	Open in IMG/M
3300006916\|Ga0070750_10286493	Not Available	707	Open in IMG/M
3300006922\|Ga0098045_1013841	All Organisms → Viruses → Predicted Viral	2235	Open in IMG/M
3300007540\|Ga0099847_1040879	All Organisms → Viruses → Predicted Viral	1475	Open in IMG/M
3300007963\|Ga0110931_1183985	Not Available	625	Open in IMG/M
3300008050\|Ga0098052_1252836	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	673	Open in IMG/M
3300008107\|Ga0114340_1116142	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1044	Open in IMG/M
3300008107\|Ga0114340_1139558	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300008259\|Ga0114841_1172192	Not Available	825	Open in IMG/M
3300008266\|Ga0114363_1134698	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300008450\|Ga0114880_1245996	Not Available	562	Open in IMG/M
3300009081\|Ga0105098_10782207	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	514	Open in IMG/M
3300009165\|Ga0105102_10440712	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	698	Open in IMG/M
3300009165\|Ga0105102_10924776	Not Available	504	Open in IMG/M
3300009183\|Ga0114974_10788767	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	510	Open in IMG/M
3300009425\|Ga0114997_10188418	Not Available	1194	Open in IMG/M
3300009428\|Ga0114915_1023061	All Organisms → Viruses → Predicted Viral	2203	Open in IMG/M
3300009467\|Ga0115565_10187987	Not Available	955	Open in IMG/M
3300009495\|Ga0115571_1081875	All Organisms → Viruses → Predicted Viral	1427	Open in IMG/M
3300010354\|Ga0129333_10500605	Not Available	1065	Open in IMG/M
3300010885\|Ga0133913_10867887	All Organisms → Viruses → Predicted Viral	2346	Open in IMG/M
3300012013\|Ga0153805_1044617	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	753	Open in IMG/M
3300017707\|Ga0181363_1090386	Not Available	519	Open in IMG/M
3300017723\|Ga0181362_1001423	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5018	Open in IMG/M
3300017723\|Ga0181362_1091240	Not Available	610	Open in IMG/M
3300017727\|Ga0181401_1023223	Not Available	1833	Open in IMG/M
3300017736\|Ga0181365_1026261	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1468	Open in IMG/M
3300017747\|Ga0181352_1068556	All Organisms → Viruses → Predicted Viral	1005	Open in IMG/M
3300017750\|Ga0181405_1070099	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	905	Open in IMG/M
3300017755\|Ga0181411_1054206	All Organisms → Viruses → Predicted Viral	1230	Open in IMG/M
3300017763\|Ga0181410_1122175	Not Available	744	Open in IMG/M
3300017765\|Ga0181413_1031132	All Organisms → Viruses → Predicted Viral	1670	Open in IMG/M
3300017766\|Ga0181343_1212684	Not Available	528	Open in IMG/M
3300017776\|Ga0181394_1077308	All Organisms → Viruses → Predicted Viral	1084	Open in IMG/M
3300017778\|Ga0181349_1277467	Not Available	550	Open in IMG/M
3300017780\|Ga0181346_1221229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300017784\|Ga0181348_1247738	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	618	Open in IMG/M
3300017818\|Ga0181565_10716975	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	633	Open in IMG/M
3300017971\|Ga0180438_11011231	Not Available	602	Open in IMG/M
3300018410\|Ga0181561_10254950	Not Available	832	Open in IMG/M
3300018428\|Ga0181568_10197376	All Organisms → Viruses → Predicted Viral	1668	Open in IMG/M
3300019784\|Ga0181359_1092377	All Organisms → Viruses → Predicted Viral	1120	Open in IMG/M
3300020161\|Ga0211726_10329211	Not Available	685	Open in IMG/M
3300020352\|Ga0211505_1090159	Not Available	734	Open in IMG/M
3300020550\|Ga0208600_1013941	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1293	Open in IMG/M
3300021140\|Ga0214168_1010929	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2837	Open in IMG/M
3300021356\|Ga0213858_10510656	Not Available	554	Open in IMG/M
3300021960\|Ga0222715_10439529	Not Available	705	Open in IMG/M
3300021961\|Ga0222714_10501469	Not Available	623	Open in IMG/M
3300021962\|Ga0222713_10221712	All Organisms → Viruses → Predicted Viral	1250	Open in IMG/M
3300022190\|Ga0181354_1013176	All Organisms → Viruses → Predicted Viral	2494	Open in IMG/M
3300022190\|Ga0181354_1103676	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	925	Open in IMG/M
3300024346\|Ga0244775_10550745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	939	Open in IMG/M
3300024346\|Ga0244775_11069558	Not Available	634	Open in IMG/M
3300025083\|Ga0208791_1076728	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	545	Open in IMG/M
3300025085\|Ga0208792_1018746	All Organisms → Viruses → Predicted Viral	1460	Open in IMG/M
3300025115\|Ga0209835_1161995	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin133	538	Open in IMG/M
3300025128\|Ga0208919_1236415	Not Available	535	Open in IMG/M
3300025276\|Ga0208814_1022272	All Organisms → Viruses → Predicted Viral	2101	Open in IMG/M
3300025896\|Ga0208916_10098112	Not Available	1237	Open in IMG/M
3300026097\|Ga0209953_1015210	All Organisms → Viruses → Predicted Viral	1450	Open in IMG/M
3300027668\|Ga0209482_1050602	All Organisms → Viruses → Predicted Viral	1521	Open in IMG/M
3300027736\|Ga0209190_1257652	Not Available	686	Open in IMG/M
3300027793\|Ga0209972_10204402	Not Available	913	Open in IMG/M
3300027804\|Ga0209358_10482879	Not Available	567	Open in IMG/M
3300027808\|Ga0209354_10065919	All Organisms → Viruses → Predicted Viral	1466	Open in IMG/M
3300028025\|Ga0247723_1056084	All Organisms → Viruses → Predicted Viral	1106	Open in IMG/M
3300029345\|Ga0135210_1030728	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	586	Open in IMG/M
3300031519\|Ga0307488_10337676	Not Available	955	Open in IMG/M
3300031601\|Ga0307992_1194149	Not Available	758	Open in IMG/M
3300031673\|Ga0307377_10716588	Not Available	701	Open in IMG/M
3300031707\|Ga0315291_10155908	All Organisms → Viruses → Predicted Viral	2383	Open in IMG/M
3300031857\|Ga0315909_10317499	Not Available	1155	Open in IMG/M
3300031857\|Ga0315909_10439996	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300031857\|Ga0315909_10505265	Not Available	833	Open in IMG/M
3300031885\|Ga0315285_10686012	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	662	Open in IMG/M
3300031885\|Ga0315285_10749031	Not Available	621	Open in IMG/M
3300031885\|Ga0315285_10956772	Not Available	518	Open in IMG/M
3300031999\|Ga0315274_10408737	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED42	1570	Open in IMG/M
3300031999\|Ga0315274_10515989	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1346	Open in IMG/M
3300032050\|Ga0315906_11154442	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	566	Open in IMG/M
3300032053\|Ga0315284_11698057	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	658	Open in IMG/M
3300032274\|Ga0316203_1015686	All Organisms → Viruses → Predicted Viral	2262	Open in IMG/M
3300032342\|Ga0315286_11670678	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	604	Open in IMG/M
3300033994\|Ga0334996_0174535	All Organisms → Viruses → Predicted Viral	1172	Open in IMG/M
3300034102\|Ga0335029_0545978	Not Available	662	Open in IMG/M
3300034104\|Ga0335031_0132650	All Organisms → Viruses → Predicted Viral	1734	Open in IMG/M
3300034122\|Ga0335060_0650381	Not Available	525	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.04%
Terrestrial	Environmental → Terrestrial	1.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	50.98%
Marine	Environmental → Aquatic → Marine	44.12%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.96%
Unclassified	Environmental → Aquatic → Unclassified	0.98%
Soil	Environmental → Terrestrial → Soil	0.98%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.98%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	21.57%
Lake	Environmental → Aquatic → Freshwater → Lake	21.57%
Oceanic	Environmental → Aquatic → Marine → Oceanic	11.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.80%
Coastal	Environmental → Aquatic → Marine → Coastal	6.86%
Strait	Environmental → Aquatic → Marine → Strait	5.88%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.92%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	3.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.94%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.94%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.96%
Ice	Environmental → Aquatic → Freshwater → Ice	0.98%
Harbor	Environmental → Aquatic → Marine → Harbor	0.98%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.98%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.98%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.98%
Clay	Environmental → Terrestrial → Soil → Clay	0.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	18.63%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	13.73%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	11.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.84%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.94%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.94%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.94%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.98%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.98%
Unclassified	Environmental → Aquatic → Marine → Harbor → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.98%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.98%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	16.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	9.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.84%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	5.88%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.92%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.92%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.92%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.94%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.94%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.94%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.94%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	2.94%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.94%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.94%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.96%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.96%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.98%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.98%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.98%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	0.98%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	0.98%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.98%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.98%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.98%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.98%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.98%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.98%
Marine Harbor	Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor	0.98%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.98%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.98%
Water	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Water	0.98%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.98%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300002294	Freshwater microbial communities from Lake Mendota, WI - 17MAY2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300004124	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (version 2)	Environmental	Open in IMG/M
3300005086	Microbial Community from Halfdan Field MHDA3	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006790	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012013	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface Ice	Environmental	Open in IMG/M
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017971	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaG	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020352	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)	Environmental	Open in IMG/M
3300020550	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021140	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025083	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025115	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaG (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026097	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300029345	Marine harbor viral communities from the Indian Ocean - SCH1	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031601	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #133	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032274	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 1	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_102415661	3300000101	Marine	MNIDINTTITFDNLLSANKRITQHIGGTRSGKTYAVLQYLIVKALQEPQNITIVRRT
DelMOSpr2010_101191884	3300000116	Marine	MELTVNTTLTFDNLLSANKRITQHIGGTRSGKTYAILQYLIVK
DelMOSpr2010_102324701	3300000116	Marine	MEVTINTTVTFDNLIGAQKRITQHIGGTRSGKTYAILQYLIVKALQEQQN
JGI20151J14362_100500981	3300001346	Pelagic Marine	MNIDINTTITFDNLLSAKKRITQHIGGTRSGKTYAILQYLIVKALQ
B570J29584_10123222	3300002294	Freshwater	VNIEINTTVTFENLLDSIARTTHHIGGTRSGKSFAILQYCIVQAIEHAQTITIVRKTIPS
B570J40625_1007345161	3300002835	Freshwater	MNLEINTTVTFEHLLDAKNRVTHHLGGTRSGKTFGILQYL
Ga0066178_102521592	3300004124	Freshwater Lake	MPEQINIQTTQTFQNLLDSDKRVSQHIGGTRSGKTYAILQYLL
Ga0072334_111880622	3300005086	Water	VEVQINTTITFDNLLGAQKRITHHVGGTRSGKTYAILQYLIVKALQEEQNITIVRRTV
Ga0068876_105127043	3300005527	Freshwater Lake	MEVTINTTVTFENLLESKSRISQHIGGTRSGKTYAILQYLIVESLKT
Ga0049081_100707545	3300005581	Freshwater Lentic	VEVTINTTITFENLLDSTKRISQHIGGTRSGKTYAILQFLIV
Ga0075441_101311033	3300006164	Marine	MELTIDTTVTFDNLLSSSKRITHHVGGTRSGKTYAILQY
Ga0075447_101542703	3300006191	Marine	MELTIDTTVTFDNLLSSSHRITHHVGGTRSGKTYAILQYLIVKSLQEQQNITVVRRT
Ga0098074_11284173	3300006790	Marine	MEIQINTTITFDNLLSAKKRITHHVGGTRSGKTYAILQYLIVK
Ga0098074_11734181	3300006790	Marine	VELQINTTITFDNLLSARKRITQHIGGTRSGKTYAILQYLIVQALQSRNDI
Ga0098055_101397212	3300006793	Marine	VEVQINTTITFDNLLGAQKRITHHVGGTRSGKTYAILQYLIVKALQ
Ga0070750_102864931	3300006916	Aqueous	MEIQINTTITFDNLLSAKKRITHHVGGTRSGKTYAILQYLIVKALQE
Ga0098045_10138417	3300006922	Marine	VKITIDTTITFDNLIGSQKRITQHIGGTRSGKTYAILQYLIVRALQERLDIT
Ga0099847_10408794	3300007540	Aqueous	MKIDINTSITFDNLINSEKRVSQHIGGTRSGKTYAILQWLIVRAIQEKQDI
Ga0110931_11839853	3300007963	Marine	VKNLTVNTTVTFDNLLGAKKRITHHIGGTRSGKTYAILQYLIVKALQEELNITIVRR
Ga0098052_12528363	3300008050	Marine	MELTVNTTITFDNLLSAKKRITQHIGGTRSGKTYAILQYLIVKALQEPQNITIVRR
Ga0114340_11161424	3300008107	Freshwater, Plankton	MEVSIDTAITFEHLIESTKRISHHIGGTRSGKTYSILQYLIVEGFKEAIDIT
Ga0114340_11395583	3300008107	Freshwater, Plankton	MNVEINTTVTFENLLESKSRISQHIGGTRSGKTYAILQYLIV
Ga0114841_11721921	3300008259	Freshwater, Plankton	VEVTINTTVTFENLLESKSRISQHIGGTRSGKTYAILQYLIVESLKTP
Ga0114363_11346983	3300008266	Freshwater, Plankton	MKLKIDTTITYSNILDSTKRVSQHIGGTRSGKTYAILQYLLVE
Ga0114880_12459962	3300008450	Freshwater Lake	MEITIDTSITFENLLESTKRITHHIGGTRSGKTYAILQYLIVEGLKQQSDITIVR
Ga0105098_107822071	3300009081	Freshwater Sediment	MNLEINTTVTFEHLLDSKHRVTQHIGGTRSGKTFGILQFLIVEAIKSAQTITIV
Ga0105102_104407123	3300009165	Freshwater Sediment	VNLEINTTVTYEHLLDAQSRITQHIGGTRSGKTYAILQWIIVQALQS
Ga0105102_109247761	3300009165	Freshwater Sediment	VNLEINTTISFEHLLDSKNRVTQHIGGTRSGKTYAILQWIIVQALQS
Ga0114974_107887671	3300009183	Freshwater Lake	VEITIDTTVTFEHLLESQSRVIQCIGGTRSGKTYAILQFLIVKGLESKQTITVVRRT
Ga0114997_101884181	3300009425	Marine	MELTVNTTVTFDNLLSAKKRITQHVGGTRSGKTYAV
Ga0114915_10230615	3300009428	Deep Ocean	MELTIDTTVTFDNLLSSSHRITHHVGGTRSGKTYAILQYLIVKSLQEQQNITVVRRTV
Ga0115565_101879871	3300009467	Pelagic Marine	VEVTINTTITFDNLIGAQKRITQHIGGTRSGKTYAILQYLI
Ga0115571_10818753	3300009495	Pelagic Marine	MELTVNTTTTFDNLLSANKRITQHIGGTRSGKTYAILQYLIV
Ga0129333_105006054	3300010354	Freshwater To Marine Saline Gradient	MEVTIDTAITFEHLLESTKRISHHCGGTRSGKTVSILQYLIVE
Ga0133913_108678871	3300010885	Freshwater Lake	VNLEINTTITFENLLDSKTRVTQHIGGTRSGKTYA
Ga0153805_10446171	3300012013	Surface Ice	VEVTINTTVTYENLLNSTNRVSQHIGGTRSGKTYAILQFLIVEAL
Ga0181363_10903862	3300017707	Freshwater Lake	LEITIDTTVTFDNILNSIARTTHHIGGTRSGKSFAILQYCIVQAI
Ga0181362_10014231	3300017723	Freshwater Lake	VEVQINTTITFENLLESKSRVTQHIGGTRSGKTYAILQFLIVQALERPQTITI
Ga0181362_10912403	3300017723	Freshwater Lake	VEVTINTTVTFEHLLESQSRVIQCIGGTRSGKTYAILQFLIVKGLESKQTITV
Ga0181401_10232236	3300017727	Seawater	MEITINTTVTFDNLMGAQKRITQHIGGTRSGKTYAILQYLIVKALQE
Ga0181365_10262615	3300017736	Freshwater Lake	MPEQINIQTTQTFQNLLDSDKRVSQHIGGTRSGKTYAILQYLLVKMI
Ga0181352_10685564	3300017747	Freshwater Lake	VEVNINTTVTFEHLLESNSRVTQHIGGTRSGKSYGILQFLIVKGLE
Ga0181405_10700991	3300017750	Seawater	MELTVNTTLTFDNLLSAKKRITQHIGGTRSGKTYAILQYLIVN
Ga0181411_10542061	3300017755	Seawater	MELTVNTTLTFDNLLSAKKRITQHIGGTRSGKTYAILQYLIVKALQEAQNITIVRRTV
Ga0181410_11221753	3300017763	Seawater	MELTVNTTLTFDNLLSAKKRITQHIGGTRSGKTYAILQYLIVKALQEA
Ga0181413_10311326	3300017765	Seawater	VNITIDTTITFDNLIEASKRVTQHIGGTRSGKTYAILQWLIVRALQETLDITVVR
Ga0181343_12126841	3300017766	Freshwater Lake	VEVVINTTVTFENLLESNARVSQHIGGTRSGKTYAI
Ga0181394_10773081	3300017776	Seawater	MELTVNTTLTFDNLLSANKRITQHIGGTRSGKTYSL
Ga0181349_12774671	3300017778	Freshwater Lake	VEVQIDTTISFQHLLDAKSRVTQHIGGTRSGKSYGILQWIIVEALQNSF
Ga0181346_12212291	3300017780	Freshwater Lake	MNLTIDTTITFDNLLDSTYRVSQHIGGTRSGKTYAILQYLI
Ga0181348_12477382	3300017784	Freshwater Lake	VEVQINTTITFENLLESKSRVTQHIGGTRSGKTYAILQFLIVQALERPQ
Ga0181565_107169751	3300017818	Salt Marsh	MNITIDTSVTFDNLLSARERVTQHIGGTRSGKTYAILQWLIVRGLQEKLDITVVRKT
Ga0180438_110112313	3300017971	Hypersaline Lake Sediment	VEITVDTTVTFENILESTQRIQHHIGGTRSGKTYALLQYCIVQALQQPQ
Ga0181561_102549501	3300018410	Salt Marsh	MKIDINTSITFDNLIQSDKRITQHIGGTRSGKTYAILQWL
Ga0181568_101973761	3300018428	Salt Marsh	MNVDINTTITFENLLGAQKRITHHVGGTRSGKTYAILQY
Ga0181359_10923771	3300019784	Freshwater Lake	VEVTINTTITFENLLESNARVSHHIGGTRSGKTYAIL
Ga0211726_103292113	3300020161	Freshwater	VNLEINTTVTFENLLDSQSRVTQHIGGTRSGKTYAVLQFLIVKA
Ga0211505_10901591	3300020352	Marine	VEVTINTTITFDNLIGAQKRITQHIGGTRSGKTYAILQYLIVKALQEPQNITIVRRT
Ga0208600_10139411	3300020550	Freshwater	VNIEINTTVTFENLLDSIARTTHHIGGTRSGKSFAILQYCIVQAIEHAQTITIVRK
Ga0214168_10109299	3300021140	Freshwater	VNIEINTTITFQHLVDSKHRVTHHIGGTRSGKTFGILQYLIVEAIREAQTITIVRRTIPS
Ga0213858_105106563	3300021356	Seawater	VEVQINTTITFDNLLGAKKRITHHVGGTRSGKTYAILQYLIVKALQEPQNI
Ga0222715_104395291	3300021960	Estuarine Water	MNIEINTTITFDNLISARKRVTQHIGGTRSGKTYAILQYLIVQGLQSPTD
Ga0222714_105014693	3300021961	Estuarine Water	MNVEINTTITFENVMASSERVTQHIGGTRSGKTYAILQYL
Ga0222713_102217125	3300021962	Estuarine Water	VEVKINTTLTFENLLESHSRVTQHIGGTRSGKTYAILQYLIVKSIENPQS
Ga0181354_10131768	3300022190	Freshwater Lake	VEVQINTTITFENLLESKSRVTQHIGGTRSGKTYAILQFLIVQALERP
Ga0181354_11036761	3300022190	Freshwater Lake	MPSQIDIQTTITYGHIENAKSRITQHIGGTRSGKTYAILQWLLVQ
Ga0244775_105507451	3300024346	Estuarine	MNLEINTTVTFEHLLDAKSRVTQHIGGTRSGKSYGILQWI
Ga0244775_110695583	3300024346	Estuarine	VEVTINTTITFENLLESNSRVTQHIGGTRSGKTYAILQFLIVEGLK
Ga0208791_10767281	3300025083	Marine	VKITIDTTITFDNLIGSQKRITQHIGGTRSGKTYAILQYLIVRALQER
Ga0208792_10187463	3300025085	Marine	MELTVNTTTTFDNLLSANKRITQHIGGTRSGKTYAILQYLIVKALQEPQNITIVRRTVP
Ga0209835_11619951	3300025115	Anoxic Lake Water	MNLEINTTVTYGHVQNAKSRITQHIGGTRSGKTYAILQWLLVQM
Ga0208919_12364151	3300025128	Marine	MEVTINTTVTFDNLVSANKRITQHIGGTRSGKTYAILQY
Ga0208814_10222721	3300025276	Deep Ocean	MELTIDTTVTFDNLLSSSHRITHHVGGTRSGKTYAILQ
Ga0208916_100981125	3300025896	Aqueous	VNIEINTTITYEHLLDANHRITQHIGGTRSGKTYAILQYLIT
Ga0209953_10152101	3300026097	Pond Water	VEITVDTTVTFENILESTQRIQHHIGGTRSGKTYALLQYCIVQALQ
Ga0209482_10506021	3300027668	Marine	MELTIDTTVTFDNLLSSSHRITHHVGGTRSGKTYAILQYLIV
Ga0209190_12576523	3300027736	Freshwater Lake	VNLEINTTITFENLLDSKTRVTQHIGGTRSGKTYAILQF
Ga0209972_102044021	3300027793	Freshwater Lake	MEVTINTTVTFENLLESKSRISQHIGGTRSGKTYAILQYLIVESLKTPLTITI
Ga0209358_104828792	3300027804	Freshwater Lake	VEVTINTTITFENLLESNARVSHHIGGTRSGKTYAILQFLIVR
Ga0209354_100659194	3300027808	Freshwater Lake	MEVTLNTTITFENLMNSTSRVTQHIGGTRSGKTYAILQY
Ga0247723_10560841	3300028025	Deep Subsurface Sediment	VNLEINTTVTFEHLLDAKSRITQHIGGTRSGKSWAILQWII
Ga0135210_10307281	3300029345	Marine Harbor	VKNLTVNTTVTFDNLLGAKKRITHHIGGTRSGKTYAILQYLIVKALQ
Ga0307488_103376764	3300031519	Sackhole Brine	MELTIDTTITFDNLLGAQNRITHHVGGTRSGKTYAILQYLIVKALQEPQNITIVRR
Ga0307992_11941491	3300031601	Marine	MDITINTTITFDNLLESSKRVTHHVGGTRSGKTYAILQYLTVKALQEPQNITVV
Ga0307377_107165883	3300031673	Soil	VKNLTIDTTISFDNLLNANKRVTQHIGGTRSGKTYAILQWLIVRAI
Ga0315291_101559086	3300031707	Sediment	MPEQINIQTTQTFQNLLDSNKRVSQHIGGTRSGKTYAILQYLLV
Ga0315909_103174994	3300031857	Freshwater	MEVTINTTVTFENLLESKSRISQHIGGTRSGKTYAILQYLIVESLKTPLTIT
Ga0315909_104399961	3300031857	Freshwater	MNVEINTTVTFENLLESKSRISQHIGGTRSGKTYAILQYLIVESLK
Ga0315909_105052651	3300031857	Freshwater	VEVTINTTVTFENLLESKSRISQHIGGTRSGKTYAILQYLIVESLK
Ga0315285_106860121	3300031885	Sediment	VNIEINTTITFEHLLESNSRVTQHIGGTRSGKSYGVLQFLIVEGLKATQ
Ga0315285_107490311	3300031885	Sediment	MLNEHLTSMKISLETTVTYQNLLDSHKRISQHIGGTRSGKSYAILQ
Ga0315285_109567721	3300031885	Sediment	VEVTINTTVTFEHLLESQSRVIQCIGGTRSGKTYAILQFLIVKGLESKQTITVV
Ga0315274_104087371	3300031999	Sediment	MNLEINTTITFENLIDAKQRVSHHIGGTRSGKTYAILQYLIVKAIETTQNITI
Ga0315274_105159891	3300031999	Sediment	VNIEINTTITFEHLLESNSRVTQHIGGTRSGKSYG
Ga0315906_111544422	3300032050	Freshwater	VNLEINTTITFENLLDAKNRITHHIGGTRSGKTYAIIQFLIVEALQTAQTITIVRK
Ga0315284_116980571	3300032053	Sediment	VNLEINTTITFENLLDSKHRVTHHIGGTRSGKTYAIIQFLI
Ga0316203_10156868	3300032274	Microbial Mat	VEVKKLTIDTSVTFDNLLGSKKRVTQHIGGTRSGKTYAILQH
Ga0315286_116706781	3300032342	Sediment	MPEQINIQTTQTFQNLLDSNKRVSQHIGGTRSGKTYAILKYLLV
Ga0334996_0174535_3_140	3300033994	Freshwater	MNLEINTTVTFEHLLDAQSRITQHIGGTRSGKTYAILQWIIVQALQ
Ga0335029_0545978_1_147	3300034102	Freshwater	MNLEINTTITFENLLDSKSRVTQHIGGTRSGKTYAILQYLIVKGIENKE
Ga0335031_0132650_1630_1734	3300034104	Freshwater	MEVQINTTITFENLLESKARVSQHIGGTRSGKSYG
Ga0335060_0650381_418_525	3300034122	Freshwater	MEVNINTTITFEHLLDAKNRITHHIGGTRSGKTYAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101884

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences