NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F101881

Metagenome / Metatranscriptome Family F101881

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F101881
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 109 residues
Representative Sequence MSDERYVVVTCVSTFRQRYCVPVSELQKLNTDVDIMNDPVKQIEWANDSVTMEEVKEFSQSHLGEQILDTFILDEERVLQLFDRDNDYLKEWTKEQKLKYIHGWKDEHTWKNK
Number of Associated Samples 88
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 64.71 %
% of genes near scaffold ends (potentially truncated) 32.35 %
% of genes from short scaffolds (< 2000 bps) 64.71 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (50.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(23.529 % of family members)
Environment Ontology (ENVO) Unclassified
(35.294 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(76.471 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 31.21%    β-sheet: 19.15%    Coil/Unstructured: 49.65%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.74
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.252.1.1: CheC-liked1xkra_1xkr0.57444
d.252.1.1: CheC-liked1squa_1squ0.52604
d.309.1.1: AMMECR1-liked1vaja11vaj0.50703
d.142.1.5: Pyruvate phosphate dikinase, N-terminal domaind1kbla31kbl0.50285
e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domaind3gv7b13gv70.50233


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF03721UDPG_MGDP_dh_N 17.65
PF07486Hydrolase_2 9.80
PF01467CTP_transf_like 9.80
PF00574CLP_protease 8.82
PF03332PMM 2.94
PF06941NT5C 1.96
PF00383dCMP_cyt_deam_1 1.96
PF04724Glyco_transf_17 0.98
PF01370Epimerase 0.98
PF08804gp32 0.98
PF00462Glutaredoxin 0.98
PF04304DUF454 0.98
PF00268Ribonuc_red_sm 0.98
PF03477ATP-cone 0.98
PF00186DHFR_1 0.98
PF00155Aminotran_1_2 0.98
PF07991IlvN 0.98
PF06841Phage_T4_gp19 0.98
PF02562PhoH 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 17.65
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 17.65
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 17.65
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 17.65
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 17.65
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 17.65
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 17.65
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 9.80
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 8.82
COG0561Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatasesCoenzyme transport and metabolism [H] 2.94
COG45025'(3')-deoxyribonucleotidaseNucleotide transport and metabolism [F] 1.96
COG0059Ketol-acid reductoisomeraseAmino acid transport and metabolism [E] 1.96
COG1702Phosphate starvation-inducible protein PhoH, predicted ATPaseSignal transduction mechanisms [T] 0.98
COG1875Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domainsGeneral function prediction only [R] 0.98
COG0499S-adenosylhomocysteine hydrolaseCoenzyme transport and metabolism [H] 0.98
COG2832Uncharacterized membrane protein YbaN, DUF454 familyFunction unknown [S] 0.98
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.98
COG0208Ribonucleotide reductase beta subunit, ferritin-like domainNucleotide transport and metabolism [F] 0.98


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.00 %
UnclassifiedrootN/A50.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000128|SA_S1_NOR08_45mDRAFT_c10038454All Organisms → cellular organisms → Bacteria1878Open in IMG/M
3300000224|SI34jun09_10mDRAFT_1005012All Organisms → Viruses → Predicted Viral3306Open in IMG/M
3300000928|OpTDRAFT_10006537Not Available16883Open in IMG/M
3300000929|NpDRAFT_10017733All Organisms → Viruses → Predicted Viral2594Open in IMG/M
3300002131|M2t2BS1_1468082Not Available47034Open in IMG/M
3300003427|JGI26084J50262_1004842Not Available6224Open in IMG/M
3300003583|JGI26253J51717_1030984All Organisms → cellular organisms → Bacteria → Proteobacteria1119Open in IMG/M
3300003621|JGI26083J51738_10066964All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage815Open in IMG/M
3300005828|Ga0074475_10341679Not Available1091Open in IMG/M
3300005837|Ga0078893_10113293All Organisms → cellular organisms → Bacteria8022Open in IMG/M
3300005837|Ga0078893_11094589All Organisms → cellular organisms → Bacteria3525Open in IMG/M
3300006164|Ga0075441_10173371All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300006165|Ga0075443_10226288Not Available674Open in IMG/M
3300006868|Ga0075481_10296354Not Available564Open in IMG/M
3300007623|Ga0102948_1001404Not Available9494Open in IMG/M
3300007623|Ga0102948_1005703Not Available4544Open in IMG/M
3300007637|Ga0102906_1131694All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium685Open in IMG/M
3300007667|Ga0102910_1036877Not Available1114Open in IMG/M
3300007725|Ga0102951_1000246Not Available18982Open in IMG/M
3300007778|Ga0102954_1011265All Organisms → Viruses → Predicted Viral2509Open in IMG/M
3300008012|Ga0075480_10538257All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37558Open in IMG/M
3300009000|Ga0102960_1180180Not Available757Open in IMG/M
3300009001|Ga0102963_1033257All Organisms → cellular organisms → Bacteria2153Open in IMG/M
3300009001|Ga0102963_1192863Not Available814Open in IMG/M
3300009052|Ga0102886_1098036Not Available892Open in IMG/M
3300009141|Ga0102884_1117854Not Available669Open in IMG/M
3300009142|Ga0102885_1116643Not Available646Open in IMG/M
3300009507|Ga0115572_10008478Not Available7631Open in IMG/M
3300009508|Ga0115567_10467076All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300010297|Ga0129345_1101536All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300010297|Ga0129345_1125000Not Available940Open in IMG/M
3300017770|Ga0187217_1049940All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1459Open in IMG/M
3300017818|Ga0181565_10000087Not Available56562Open in IMG/M
3300017818|Ga0181565_10907088All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon549Open in IMG/M
3300017824|Ga0181552_10050992Not Available2431Open in IMG/M
3300017950|Ga0181607_10017796Not Available5446Open in IMG/M
3300017950|Ga0181607_10104935All Organisms → cellular organisms → Bacteria1779Open in IMG/M
3300017951|Ga0181577_10015699Not Available5596Open in IMG/M
3300017951|Ga0181577_10886933All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium533Open in IMG/M
3300017952|Ga0181583_10381486All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium880Open in IMG/M
3300017956|Ga0181580_10653158All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon673Open in IMG/M
3300017964|Ga0181589_10218632Not Available1318Open in IMG/M
3300017986|Ga0181569_10026059Not Available4237Open in IMG/M
3300018048|Ga0181606_10067677All Organisms → cellular organisms → Bacteria2353Open in IMG/M
3300018049|Ga0181572_10000266Not Available36012Open in IMG/M
3300018410|Ga0181561_10140934All Organisms → cellular organisms → Bacteria1248Open in IMG/M
3300018421|Ga0181592_10354871All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1047Open in IMG/M
3300020055|Ga0181575_10001079Not Available19726Open in IMG/M
3300020174|Ga0181603_10399476All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300020177|Ga0181596_10023903Not Available4208Open in IMG/M
3300020188|Ga0181605_10360474All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300020191|Ga0181604_10297956Not Available734Open in IMG/M
3300020810|Ga0181598_1018628All Organisms → Viruses → Predicted Viral4181Open in IMG/M
3300021085|Ga0206677_10010200Not Available6565Open in IMG/M
3300021085|Ga0206677_10044132Not Available2368Open in IMG/M
3300021085|Ga0206677_10119512All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1215Open in IMG/M
3300021085|Ga0206677_10387046Not Available532Open in IMG/M
3300021185|Ga0206682_10271926Not Available746Open in IMG/M
3300021335|Ga0213867_1009203All Organisms → Viruses → Predicted Viral4191Open in IMG/M
3300021336|Ga0210307_1306536All Organisms → cellular organisms → Bacteria1635Open in IMG/M
3300021356|Ga0213858_10000079Not Available39915Open in IMG/M
3300021364|Ga0213859_10404183All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium604Open in IMG/M
3300021960|Ga0222715_10142513All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1495Open in IMG/M
3300021960|Ga0222715_10156502All Organisms → Viruses1406Open in IMG/M
3300021960|Ga0222715_10564964All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300022909|Ga0255755_1326479All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300022927|Ga0255769_10329860All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300023105|Ga0255782_10039432All Organisms → cellular organisms → Bacteria → Proteobacteria2691Open in IMG/M
(restricted) 3300023109|Ga0233432_10001698Not Available21073Open in IMG/M
3300023568|Ga0228696_1030177Not Available624Open in IMG/M
3300023699|Ga0228695_1045953All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300024229|Ga0233402_1084716Not Available662Open in IMG/M
(restricted) 3300024255|Ga0233438_10088332Not Available1445Open in IMG/M
3300024281|Ga0228610_1024602All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage745Open in IMG/M
3300024348|Ga0244776_10229829All Organisms → cellular organisms → Bacteria1301Open in IMG/M
3300024508|Ga0228663_1060332All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage710Open in IMG/M
3300025617|Ga0209138_1095878All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage882Open in IMG/M
3300025636|Ga0209136_1048664All Organisms → Viruses → Predicted Viral1440Open in IMG/M
3300025653|Ga0208428_1183978Not Available542Open in IMG/M
3300025701|Ga0209771_1187551Not Available608Open in IMG/M
3300025849|Ga0209603_1081201All Organisms → cellular organisms → Bacteria1524Open in IMG/M
3300026123|Ga0209955_1000149Not Available28694Open in IMG/M
3300026123|Ga0209955_1001264Not Available7873Open in IMG/M
3300026130|Ga0209961_1024283All Organisms → cellular organisms → Bacteria1335Open in IMG/M
3300026183|Ga0209932_1082198Not Available731Open in IMG/M
3300026187|Ga0209929_1161300Not Available541Open in IMG/M
3300026513|Ga0247590_1058650All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage992Open in IMG/M
3300027255|Ga0208681_1078647Not Available564Open in IMG/M
3300027714|Ga0209815_1147349All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300027833|Ga0209092_10000680Not Available34105Open in IMG/M
3300028008|Ga0228674_1029965Not Available2196Open in IMG/M
3300028109|Ga0247582_1169534Not Available558Open in IMG/M
3300028127|Ga0233401_1073530All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300031140|Ga0308024_1058264All Organisms → Viruses → Predicted Viral1012Open in IMG/M
3300031519|Ga0307488_10037997Not Available3800Open in IMG/M
3300031569|Ga0307489_10027408Not Available3160Open in IMG/M
3300031589|Ga0307996_1077975Not Available879Open in IMG/M
3300031589|Ga0307996_1109088Not Available733Open in IMG/M
3300031601|Ga0307992_1288784All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300031658|Ga0307984_1053518All Organisms → Viruses → Predicted Viral1254Open in IMG/M
3300031702|Ga0307998_1011543Not Available3929Open in IMG/M
3300031851|Ga0315320_10267296All Organisms → cellular organisms → Bacteria1233Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh23.53%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater11.76%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine7.84%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine6.86%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water6.86%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater5.88%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine5.88%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water4.90%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.94%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.94%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.94%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine2.94%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.96%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water1.96%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine1.96%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.96%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine1.96%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.98%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine0.98%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.98%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.98%
MarineEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine0.98%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000128Marine microbial communities from chronically polluted sediments in Adventfjord, Norway : sample - Svalbard Archipelago station 1 sample NOR 08_45mEnvironmentalOpen in IMG/M
3300000224Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 10mEnvironmentalOpen in IMG/M
3300000928Marine plume microbial communities from the Columbia River - 25 PSUEnvironmentalOpen in IMG/M
3300000929Marine plume microbial communities from the Columbia River - 15 PSUEnvironmentalOpen in IMG/M
3300002131Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2BS1 (111f)EnvironmentalOpen in IMG/M
3300003427Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNAEnvironmentalOpen in IMG/M
3300003583Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNAEnvironmentalOpen in IMG/M
3300003621Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNAEnvironmentalOpen in IMG/M
3300005828Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.182_BBIEnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006165Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300007623Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MGEnvironmentalOpen in IMG/M
3300007637Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02EnvironmentalOpen in IMG/M
3300007667Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3EnvironmentalOpen in IMG/M
3300007725Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MGEnvironmentalOpen in IMG/M
3300007778Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009052Estuarine microbial communities from the Columbia River estuary - metaG 1550A-02EnvironmentalOpen in IMG/M
3300009141Estuarine microbial communities from the Columbia River estuary - metaG 1550A-3EnvironmentalOpen in IMG/M
3300009142Estuarine microbial communities from the Columbia River estuary - metaG 1550B-3EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018048Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018049Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018410Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020055Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020174Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020177Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020188Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020191Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020810Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021335Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540EnvironmentalOpen in IMG/M
3300021336Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021364Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304EnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300022909Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaGEnvironmentalOpen in IMG/M
3300022927Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaGEnvironmentalOpen in IMG/M
3300023105Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023568Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 84R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023699Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 81R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024229Seawater microbial communities from Monterey Bay, California, United States - 54DEnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300024281Seawater microbial communities from Monterey Bay, California, United States - 11DEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300024508Seawater microbial communities from Monterey Bay, California, United States - 77DEnvironmentalOpen in IMG/M
3300025617Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025636Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025701Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300026123Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026130Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026187Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026513Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 51R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027255Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027833Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028008Seawater microbial communities from Monterey Bay, California, United States - 1D_rEnvironmentalOpen in IMG/M
3300028109Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 41R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028127Seawater microbial communities from Monterey Bay, California, United States - 49DEnvironmentalOpen in IMG/M
3300031140Marine microbial communities from water near the shore, Antarctic Ocean - #420EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031569Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2EnvironmentalOpen in IMG/M
3300031589Marine microbial communities from David Island wharf, Antarctic Ocean - #35EnvironmentalOpen in IMG/M
3300031601Marine microbial communities from Ellis Fjord, Antarctic Ocean - #133EnvironmentalOpen in IMG/M
3300031658Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78EnvironmentalOpen in IMG/M
3300031702Marine microbial communities from David Island wharf, Antarctic Ocean - #37EnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SA_S1_NOR08_45mDRAFT_1003845433300000128MarineMNNSEDDIFVPEERYVVVTTVSQFRQRYAIPLSELQKLNTDVDIMNDPVKQVEWANDSVSMEDIKEFSQHYLGESIIDTFILDEERVKLMFNRDNDYLSDWSDEKKMDFIKDWKQSK*
SI34jun09_10mDRAFT_100501253300000224MarineMQNSNERYVVVTTVSQFRQRYTIPVSELQKLNPHVDISNNVVKQVEWAQDSVTTEDVNEFSQKWLGETIVDTFILDEERVLNLFDRDNDYLKEWSKKQKLEFFNNWQDKTSD*
OpTDRAFT_1000653773300000928Freshwater And MarineMSDEKYIVVTATSTHRMRYCIPVSELQKLNTDVDITNDIPKQIEWANDSVSSEEIKEFSQHYIGENIVDTFILDEERMLMMFDRDNEYLADWPKNKKIEYVHDWKEAITWKNK*
NpDRAFT_1001773343300000929Freshwater And MarineMQNKDERYVVVTAISSFRQRYTIPVSELQKLNPEVDITNNPGGQIEWANDEVAMEKVKEFSQHWLGEQICDTMILDEERVLKLFDRDNDYLSTWTTQQKLDYINKWKENE*
M2t2BS1_1468082543300002131MarineMPNENERYVVVTCISSFRQRYAIPVSELQKLNPDVDITNNIDEQITWANDSVTMEEVKEFSQKWLGESIVDTFILDEERVKLMFNRDNDYLSSWSDEEKIEWIKDCWENKNE*
JGI26084J50262_100484293300003427MarineMSDERYVVVTCVSTFRQRYCVPVSELQKLNTDVDIMSDPVKQIEWANDSVTMEEVKEFSQSHLGEQILDTFILDEERVLQLFDRDNDYLKEWTKEQKLKYIHDWKDEHTWKNK*
JGI26253J51717_103098413300003583MarineMSDERYVVVTCVSTFRQRYCVPVSELQKLNTDVDIMNDPAKQIEWAEDSVTMEEVKEFSQSHLGEQILDTFILDEERVLQLFDRDNDYLKEWTKEQKLERIHNWKDEYTWKNK*
JGI26083J51738_1006696413300003621MarineMSDERYVVVTCVSTFRQRYCVPVSELQKLNTDVDIMSDPVKQIEWANDSVTMEEVXEFSQSHLGEQILDTFILDEERVLQLFDRDNDYLKEWTKEQKLKYIHDWKDEHTWKNK*
Ga0074475_1034167913300005828Sediment (Intertidal)MQNKDERYVVVTTISSFRQRYAIPVSELQKLNPEVDITNNPGGQIEWANDEVTMEKVKEFSQHWLGEQICDTMILDEERVLKLFDRDNDYLSTWTTQQKLDYINKWKENE*
Ga0078893_1011329383300005837Marine Surface WaterMSDERYVVVTAVSTFRQRYCIPVSKLQEMNPEVDVTDNPALQIQWTQDAVTMEEVKEFSQKWLTETIVDTFILDEERVLNLFDRDNDYLSGWPKEKKLSYLDNWKEEPVKL*
Ga0078893_1109458923300005837Marine Surface WaterMSNPKERYVVVTCISQFRQRYAIPVSELQALNPDVDISADPAKQIEWASDNVTCEKVSEFSQKWIGESIVDAMILDEERIVNLFDRDNDYLKEWTRQQKLDYIADWEEKDESL*
Ga0075441_1017337123300006164MarineMNSSEDDIFVPEERYVVVTTVSQFRQRYAIPVSELQKLNTDIDIMNDPVKQVEWANDSVSMEDIKEFSQHYLGESIIDTFILDEERVKLMFNRDNDYLSDWSDEKKMDFIKDWKQSK*
Ga0075443_1022628813300006165MarineVVVTTVSQFRQRYAIPVSELQKLNTDIDIMNDPVKQVEWANDSVSMEDIKEFSQHYLGESIIDTFILDEERVKLMFNRDNDYLSDWSDEKKMDFIKDWKQSK*
Ga0075481_1029635413300006868AqueousMSNERYVVVTAISTHRMRYAIPMSELQKLSPEIDITDNPAIQIEWAQDAVTMEEVKDFSQDHLGEQIVDTFILDEERVLQLFDRDNDYLKPWTKEQKLEYIHEWKDEYTWNNK*
Ga0102948_100140473300007623WaterMSDERYVVVTAISQHRMRYCVPVSELQKLNTDIDIANNPKMQVEWANDCVTMEDVEEFSQHYIGEQIIDTFIVDEERMLLMFDRDNDYLADWPREQKIDKVHNWKASWKKGK*
Ga0102948_1005703103300007623WaterMSNPDERYVVVTCTSMHRMRYCVPVSKLQEVNPDIDITNDVKTQMQWANDLVTMEQVKEFSQLHISEDIIDTFILDEERVLNLWDRDNDYLASWTKEQKLERLHDWKDDWKKS*
Ga0102906_113169423300007637EstuarineLRMQNSNERYVVVTTVSQFRQRYTIPVSELQKLNPHVDISNNVVKQVEWAQDSVTTEDVNEFSQKWLGETIVDTFILDEERVLNLFDRDNDYLKEWSKKQKLEFFNNWQDKTSD*
Ga0102910_103687733300007667EstuarineMQNKDERYVVVTAISSFRQRYTIPVSELQKLNPEVDITNNPGGQIEWANDEVTMEKVKEFSQHWLGEQICDTMILDEERVLKLFDRDNDYLSTWTTQQKLDYINKWKENE*
Ga0102951_1000246193300007725WaterMSDERYVVVTAISQHRMRYCVPVSELQKLNTDIDIANNPKMQVEWANDCVTMEDVEEFSQHYIGEQIIDTFIVDEERMLLMFDRDNDYLANWPREQKIDKVHNWKASWKKGK*
Ga0102954_101126533300007778WaterMSNPDERYVVVTCTSMHRMRYCVPVSKLQEVNPDVDIANDVKTQMQWANDLVTMEQVKEFSQLHISEDIIDTFILDEERVLNLWDRDNDYLASWTKEQKLERLHDWKDDWKKS*
Ga0075480_1053825723300008012AqueousMSDERYVVVTAISTHRMRYAIPMSELQKLSPEIDITDNPAIQIEWAQDAVTMEEVKDFSQDHLGEQIVDTFILDEERVLQLFDRDNDYLKPWTKEQKLEYIHEWKDEYTWNNK*
Ga0102960_118018013300009000Pond WaterCIPVSELQKLNPDVDISNDREKQIEWAKDSVTMEEVNDFSQHWLGEQISDTFILDKERVLQLFDRDNDYLKEWTEEKKINHIHNWRVHSVF*
Ga0102963_103325723300009001Pond WaterMSDDERYVVVTAVSTHRMRYCIPVSELQKLNPDVDISNDREKQIEWAKDSVTMEEVNDFSQHWLGEQISDTFILDKERVLQLFDRDNDYLKEWTEEKKINHIHNWRVHSVF*
Ga0102963_119286323300009001Pond WaterMSDDFSDNERYVVVTAISTHRMRYCVPVSKLQELNKDVDIMNDPAKQVEWVKDSVTMEEVKEFSQHWVGEQIVDSFILDEERVLQLFNKDNDYLSDWDKEKKLKYIHNWRETGVF*
Ga0102886_109803623300009052EstuarinePVSELQKLNTNVDITNDIPKQIEWANDSVSSEEIKEFSQHYIGENIVDTFILDEERMLMMFDRDNEYLADWSKNKKIEYVHDWKEAITWKNK*
Ga0102884_111785423300009141EstuarineMSDEKYIVVTATSTHRMRYCIPVSELQKLNTDVDITNDIPKQIEWANDSVSSEEIKEFSQHYIGENIVDTFILDEERMLMMFDRDNEYLADWSKNKKIEYVHDWKEAITWKNK*
Ga0102885_111664313300009142EstuarineYCIPVSELQKLNTNVDITNDIPKQIEWANDSVSSEEIKEFSQHYIGENIVDTFILDEERMLMMFDRDNEYLADWPKNKKIEYVHDWKEAITWKNK*
Ga0115572_1000847883300009507Pelagic MarineMSNPDERYVVVTAISTHRMRYAIPMSELQKLNPEIDITDNPAIQIEWAEDSVTMEEVKDFSQDHLGEQIVDTFILDEERVLQLFDRDNDYLKSWTKEQKLKYIHEWKDNWKER*
Ga0115567_1046707623300009508Pelagic MarineMSNENERYVVVTATSTFRQRYAIPVSELQKLNTSVPFDIQKAIEWAEDSVTCEEVAEFSQKWLGETIVDTFILDEERVLNLFDRDNDYLKDWTKEQKISYIHKWKENI*
Ga0129345_110153633300010297Freshwater To Marine Saline GradientMSDERYVVVTAISTHRMRYCIPVSELQKLNPDVDITNDIVKQVEWANDSVTMEEVKEFSQHHVAENIVDTFILDEERVLNLFDRDNDYLKSWTKEKKISHIHDWKDNWKSK*
Ga0129345_112500033300010297Freshwater To Marine Saline GradientMTYDLKFTTCGDYMTEYDKDERYVITTVTSTFRQRYCVPVSKLQELNTDVDITNNPKLQIEWLEDSVTAEEVREFSQKWLGEQIIDTYILDEERILKLFDRDNDYLASWEKDQKLKWIHNWKEKDFNASVKKENGNDIK*
Ga0187217_104994043300017770SeawaterMSDEKYIVVTATSTHRMRYCIPVSELQKLNTDVDITNDIPKQIEWANDSVSSEEIKEFSQHYIGENIVDTFILDEERMLMMFDRDNEYLSDWPKDKKLKYVHD
Ga0181565_1000008753300017818Salt MarshMNDLKFTTCGDYMATTEERYVVVTTTSSFRQRYCIPVSKLQEMNTDVDITNDPVKQVEWAQDSVTAEEIKEFSQKWLGETILDTFILDEERVLQLFDRDNEYLKEWTKEKKLEWLDDWKEKPRGP
Ga0181565_1090708823300017818Salt MarshMSDERYVVVTTTSTHRIRYCVPVSKLQEMNTDIDITNSPKTQIEWAQDSVVAEEVKEFSQDWLGEQIVDTFILDEERVLQLFDRDNDYLAKWPKEQKLEYIHKWERNDVT
Ga0181552_1005099223300017824Salt MarshMSDERYVVVTCVSTFRERYCIPVSELQKLNPDVDITNNPVKQIEWANDSVTMEDVEEFSQTHLGEQILDTFILDEERVLQLFDRDNDYLKEWPRDKKLEHIHDWQAKWKKDQK
Ga0181607_1001779643300017950Salt MarshMSDERYVVVTAVSTHRMRYAIPMSELQKLNPEIDITDNPAIQIEWAKDAVTMEEVKDFSQDHLGEQIVDTFILDEERVLQLFDRDNDYLKSWTKEQKLKYIHEWKDDYTWNNK
Ga0181607_1010493533300017950Salt MarshMQNENERYVVVTTISTFRERYCIPVSKLQELNSEVDITNNIAEQTTWAKDEVTMENVKEFSQEWLGESIVDTFILDEQRVLNLFDRDNEYLSSWTTQQKLDYIHKWKDNRDV
Ga0181577_10015699133300017951Salt MarshMSDERYVVVTTTSTHRIRYCVPVSKLQEMNTDIDITNSPKTQIEWAQESVVAEEVKEFSQDWLGEQIVDTFILDEERVLQLFDRDNDYLAKWPKEQKLEYIHKWEINDVT
Ga0181577_1088693323300017951Salt MarshMTDKFSLEDVQGPSDERYVVVTATSTHRMRYCVPASQLDTDDPAKMIEYAKDSVVMQEVKEFSQDWLGEQIVDTFILDEERVLQLFDRDNDYLSGWPKEQKLEYIHNWEEKDVT
Ga0181583_1038148633300017952Salt MarshMNDLKFTTCGDYMATTEERYVVVTTTSSFRQRYCIPVSKLQELNTDVDITSNPKLQIEWLEDSVTAEEVKEFSQKWLGEQIIDTYILDEERILNLFDRDNDYLAEWEKEQKLKWIHEWE
Ga0181580_1065315823300017956Salt MarshMSDERYVVVTTTSTHRIRYCVPVSKLQEMNTDIDITNSPKTQIEWAQESVVSEEVKEFSQDWLGEQIVDTFILDEERVLQLFDRDNDYLAKWPKEQKLEYIHKWERNDVT
Ga0181589_1021863233300017964Salt MarshMSDERYVVVTTTSTHRIRYCVPVSKLQEMNTDIDITNSPKTQIEWAQDSVVAEEVKEFSQDWLGEQIVDTFILDEERVLQLFDRDNDYLANWPKEQKLEYIHKWEINDVT
Ga0181569_1002605953300017986Salt MarshMSDERYVVVTTTSTHRIRYCVPVSKLQEMNTDIDITNSPKTQIEWAQDSVVAEEVKEFSQDWLGEQIVDTFILDEERVLQLFDRDNDYLAKWPKEQKLEYIHKWEINDVT
Ga0181606_1006767773300018048Salt MarshTTISTFRERYCIPVSKLQELNSEVDITNNIAEQTSWAKDEVTMENVKEFSQEWLGESIVDTFILDEQRVLNLFDRDNEYLSSWTTQQKLDYIHKWKDNNNV
Ga0181572_10000266113300018049Salt MarshMNDLKFTTCGDYMATTEERYVVVTTTSSFRQRYCIPVSKLQEMNTDVDITNDPVKQVEWAQDSVTAEEIKEFSQKWLGETILDTFILDEERVLQLFDRDNEYLKEWTKEKKLEWLNDWKEKPVGP
Ga0181561_1014093433300018410Salt MarshMSNPDERYVVVTCTSMHRMRYCVPVSKLQEVNTDVNIMNDPAKQIEWANDLVTMEEVREFSQHHVSEDIIDTFILDEERVLNLFDRDNDYLKSWTKDQKLKHLHDWKDDWKKS
Ga0181592_1035487123300018421Salt MarshMSDERYVVVTTTSTHRIRYCVPVSKLQEMNTDIDITNSPKTQIEWAQESVVAEEVKEFSQDWLGEQIVDTFILDEERVLQLFDRDNDYLAKWPKEQKLEYIHKWERNDVT
Ga0181575_10001079433300020055Salt MarshMSDERYVVVTAISTHRMRYCVPVSKLQEMNTDIDITNSPKTQIEWAQESVVAEEVKEFSQDWLGEQIVDTFILDEERVLQLFDRDNDYLAKWPKEQKLEYIHKWERNDVT
Ga0181603_1039947613300020174Salt MarshMQNENERYVVVTTISTFRERYCIPVSKLQELNSEVDITNNIAEQTSWAKDEVTMENVKEFSQEWLGESIVDTFILDEQRVLNLFDRDNEYLSSWTTQ
Ga0181596_10023903123300020177Salt MarshRKRSKNLRATERKIQMSDERYVVVTAVSTHRMRYAIPMSELQKLNPEIDITDNPAIQIEWAKDAVTMEEVKDFSQDHLGEQIVDTFILDEERVLQLFDRDNDYLKSWTKEQKLKYIHEWKDDYTWNNK
Ga0181605_1036047423300020188Salt MarshMQNENERYVVVTTISTFRERYCIPVSKLQELNSEVDITNNIAEQTSWAKDEVTMENVKEFSQEWLGESIVDTFILDEQRVLNLFDRDNEYLSSWTTQQKLDYIHKWKDNNNV
Ga0181604_1029795633300020191Salt MarshCIPVSKLQELNTDIDITDNPKFQVEWANDSVTAEEVKEFSQKWLGEQIVDTFILDEERALQLFDRDNEYLSTWTKEKKLEWISDWRENTSDDHTR
Ga0181598_101862813300020810Salt MarshNLRATKRKIQMSDERYVVVTAVSTHRMRYAIPMSELQKLNPEIDITDNPAIQIEWAKDAVTMEEVKDFSQDHLGEQIVDTFILDEERVLQLFDRDNDYLKSWTKEQKLKYIHEWKDDYTWNNK
Ga0206677_1001020093300021085SeawaterMSNPKERYVVVTCISQFRQRYAIPVSELQALNTDVDISADPAKQIEWASDNVTCESVKEFSQKWLGESIVDAMILDEERVVNLFDRDNDYLKEWTRNQKLDFISDWKEKDE
Ga0206677_1004413273300021085SeawaterMSNPKERYVVVTCISQFRQRYAIPVSELQALNPDVDISADPAKQIEWASDNVTCEKTKEFSQKWLGESIVDAMILDEERVVNLFDRDNDYLKEWTRNQKLDFITDWEEKDE
Ga0206677_1011951233300021085SeawaterMSDERYVVVTCVSTFRQRYCVPVSELQKLNTDVDIMNDPVKQIEWANDSVTMEEVKEFSQSHLGEQILDTFILDEERVLQLFDRDNDYLKEWTKEQKLKYIHGWKDEHTWKNK
Ga0206677_1038704623300021085SeawaterMSDERYVVVTCVSTFRQRYCVPVSELQKLNTDVDIMNDPAKQIEFANDAVTMEEVQEFSQTHLGEQILDTFILDEERALMMFDRDNEYLKEWTKEQKLERIHDWKDEYTWKNK
Ga0206682_1027192623300021185SeawaterMSDEKYIVVTATSTHRMRYCIPVSELQKLNTDVDITNDIPKQIEWANDSVSSEEIKEFSQHYIGENIVDTFILDEERMLMMFDRDNEYLSDWPKDKKLKYVHDWKEAITWKNK
Ga0213867_100920383300021335SeawaterMNDLKFTTCGDYMATTEERYVVVTTTSSFRQRYCIPVSKLQEMNTDVDITNDPVKQVEWAQDSVTAEEIKEFSQKWLGETILDTFILDEERVLQLFDRDNEYLKEWTKEYKLQWLNDWKEKPVGP
Ga0210307_130653633300021336EstuarineMQNKDERYVVVTTISSFRQRYAIPVSELQKLNPEVDITNNPGGQIEWANDEVTMEKVKEFSQHWLGEQICDTMILDEERVLNLFDRDNDYLSSWTTQQKLDYIHKWKENE
Ga0213858_1000007973300021356SeawaterMSDERYVVVTCVSSFRQRYCIPVSELQKLNPDVDITNDPEKQVEWANDSVVGEEIKEFSQKWLGEQILDTFIVDEPRVLHMFNRDNDYLAGWEKEQKLKYIHDWREKKDEFKK
Ga0213859_1040418323300021364SeawaterMKDLKFTTCGDYMATTEERYVVVTTTSSFRQRYCIPVSKLQEMNTDVDITNDPVKQVEWAQDSVTAEEIKEFSQKWLGETILDTFILDEERVLQLFDRDNEYLKEWTKEYKLQWLNDWKEKPVGP
Ga0222715_1014251323300021960Estuarine WaterMSDERYVVVTCVSTFRERYCIPVSELQKLNPEVDITNNPAKQIEWANDSVTMEDVEEFSQNHLGEQILDTFILDEERVLQLFDRDNDYLKDWSKSKKLEHLHDWKAKWKKDQK
Ga0222715_1015650213300021960Estuarine WaterERYCIPVSELQKLNPDVDITNNPAKQIEWANDSVTMEDVEEFSQTHLGEQILDTFILDEERVLQLFDRDNGYLKEWSRDKKLKHIHDWRAKWKKDQK
Ga0222715_1056496413300021960Estuarine WaterPVSELQKLNPEVDITNNPVKQIEWANDSVTMEDVEEFSQSHLGEQILDTFILDEERVLQLFDRDNDYLKEWTKEQKLKHIHNWRAKWKKDQK
Ga0255755_132647913300022909Salt MarshVDITNNPVKQIEWANDSVTMEDVEEFSQTHLGEQILDTFILDEERVLQLFDRDNDYLKEWPRDKKLEHIHDWQAKWKKDQK
Ga0255769_1032986013300022927Salt MarshMQNENERYVVVTTISTFRERYCIPVSKLQELNSEVDITNNIAEQTSWAKDEVTMENVKEFSQEWLGESIVDTFILDEQRVLNLFDRDNEYLSSWTTQQKLDYIHK
Ga0255782_1003943213300023105Salt MarshMSDERYVVVTTTSTHRIRYCVPVSKLQEMNTDIDITNSPKTQIEWAQESVVAEEVKEFSQDWLGEQIVDTFILDEERVLQLFDRDNDYLAKWPKEQKLEYIHK
(restricted) Ga0233432_1000169893300023109SeawaterMSDERYVVVTCVSTFRQRYCVPVSELQKLNTDVDIMNDPAKQIEWAEDSVTMEEVKEFSQSHLGEQILDTFILDEERVLQLFDRDNDYLKEWTKEQKLERIHNWKDEYTWKNK
Ga0228696_103017713300023568SeawaterQRYCVPVSELQKLNTDVDIMNDPAKQIEFANDAVTMEEVQEFSQTHLGEQILDTFILDEERALMMFDRDNEYLKEWTKEQKLERIHDWKDEYTWKNK
Ga0228695_104595313300023699SeawaterDEKYIVVTATSTHRMRYCIPVSELQKLNTDVDITNDIPKQIEWANDSVSSEEIKEFSQHYIGENIVDTFILDEERMLMMFDRDNEYLSDWPKDKKLKYVHDWKEAITWKNK
Ga0233402_108471613300024229SeawaterLNTDVDIMNDPAKQIEFANDAVTMEEVQEFSQTHLGEQILDTFILDEERALMMFDRDNEYLKEWTKEQKLERIHDWKDEYTWKNK
(restricted) Ga0233438_1008833223300024255SeawaterMSDEKYIVVTATSTHRMRYCIPVSELQKLNTDVDITNDIPKQIEWANDSVSSEEIKEFSQHYIGENIVDTFILDEERMLMMFDRDNEYLADWPKNKKIEYVHDWKEAITWKNK
Ga0228610_102460223300024281SeawaterMSDERYVVVTCVSTFRQRYCVPVSELQKLNTDVDIMNDPAKQIEFANDAVTMEEVQEFSQTHLGEQILDTFILDEERALMMFDSDNEYLKEWTKEQKLE
Ga0244776_1022982913300024348EstuarineATSTHRMRYCIPVSELQKLNTDVDITNDIPKQIEWANDSVSSEEIKEFSQHYIGENIVDTFILDEERMLMMFDRDNEYLADWSKNKKIEYVHDWKEAITWKNK
Ga0228663_106033223300024508SeawaterMSDERYVVVTCVSTFRQRYCVPVSELQKLNTDVDIMNDPAKQIEFANDAVTMEEVQEFYQTHLGEQILDTFILDEERALMMFDRDNEYLKEWTKEQKLERIHDWKDEYTWKNK
Ga0209138_109587823300025617MarineMSDERYVVVTCVSTFRQRYCVPVSELQKLNTDVDIMSDPVKQIEWANDSVTMEEVKEFSQSHLGEQILDTFILDEERVLQLFDRDNDYLKEWTKEQKLKYIHDWKDEHTWKNK
Ga0209136_104866433300025636MarineMSDERYVVVTCVSTFRQRYCVPVSELQKLNTDVDIMSDPVKQIEWANDSVTMEEVKEFSQSHLGEQILDTFILDEERVLQLFDRDNEYLKEWTKEQKLKHIHDWKDEYAWKNK
Ga0208428_118397813300025653AqueousLRATKRKIQMSNERYVVVTAISTHRMRYAIPMSELQKLSPEIDITDNPAIQIEWAQDAVTMEEVKDFSQDHLGEQIVDTFILDEERVLQLFDRDNDYLKPWTKEQKLEYIHEWKDEYTWNNK
Ga0209771_118755113300025701MarineTFRQRYCVPVSELQKLNTDVDIMSDPVKQIEWANDSVTMEEVKEFSQSHLGEQILDTFILDEERVLQLFDRDNDYLKEWTKEQKLKYIHDWKDEHTWKNK
Ga0209603_108120143300025849Pelagic MarinePMSELQKLNPEIDITDNPAIQIEWAEDSVTMEEVKDFSQDHLGEQIVDTFILDEERVLQLFDRDNDYLKSWTKEQKLKYIHEWKDNWKER
Ga0209955_1000149473300026123WaterMSDERYVVVTAISQHRMRYCVPVSELQKLNTDIDIANNPKMQVEWANDCVTMEDVEEFSQHYIGEQIIDTFIVDEERMLLMFDRDNDYLADWPREQKIDKVHNWKASWKKGK
Ga0209955_100126483300026123WaterMSNPDERYVVVTCTSMHRMRYCVPVSKLQEVNPDVDIANDVKTQMQWANDLVTMEQVKEFSQLHISEDIIDTFILDEERVLNLWDRDNDYLASWTKEQKLERLHDWKDDWKKS
Ga0209961_102428333300026130WaterMSNPDERYVVVTCTSMHRMRYCVPVSKLQEVNPDIDITNDVKTQMQWANDLVTMEQVKEFSQLHISEDIIDTFILDEERVLNLWDRDNDYLASWTKEQKLERLHDWKDDWKKS
Ga0209932_108219833300026183Pond WaterRYCIPVSELQKLNPDVDISNDREKQIEWAKDSVTMEEVNDFSQHWLGEQISDTFILDKERVLQLFDRDNDYLKEWTEEKKINHIHNWRVHSVF
Ga0209929_116130013300026187Pond WaterMSDDFSDNERYVVVTAISTHRMRYCVPVSKLQELNKDVDIMNDPAKQVEWVKDSVTMEEVKEFSQHWVGEQIVDSFILDEERVLQLFNKDNDYLSDWDKEKKLKYIHNWRETGVF
Ga0247590_105865033300026513SeawaterMSDEKYIVVTATSTHRMRYCIPVSELQKLNTDVDITNDIPKQIEWANDSVSSEEIKEFSQHYIGENIVDTFILDEERMLMMFDRDNEYLADWSKNKKIEYVHDWKEAITWKNK
Ga0208681_107864713300027255EstuarineYVVVTAISSFRQRYTIPVSELQKLNPEVDITNNPGGQIEWANDEVAMEKVKEFSQHWLGEQICDTMILDEERVLKLFDRDNDYLSTWTTQQKLDYINKWKENE
Ga0209815_114734923300027714MarineMNSSEDDIFVPEERYVVVTTVSQFRQRYAIPVSELQKLNTDIDIMNDPVKQVEWANDSVSMEDIKEFSQHYLGESIIDTFILDEERVKLMFNRDNDYLSDWSDEKKMDFIKDWKQSK
Ga0209092_10000680213300027833MarineMQKLDERYVVVTTVSQFRQRYTIPVSELQKLNPHVDISNDVVKQVEWAQDSVTTEDVNEFSQKWLGETIVDTFILDEERVLNLFDRDNDYLKEWSKKQKLEFFNNWQDKTSD
Ga0228674_102996513300028008SeawaterATSTHRMRYCIPVSELQKLNTNVDITNDIPKQIEWANDSVSSEEIKEFSQHYIGENIVDTFILDEERMLMMFDRDNEYLSDWPKDKKLKYVHDWKEAITWKNK
Ga0247582_116953413300028109SeawaterMSDERYVVVTCVSNFRQRYCVPVSELQKLNTDVDIMNDPAKQIEFANDAVTMEEVQEFSQTHLGEQILDTFILDEERALMMFDRDNEYLKEWTKEQKLERIHDWKDEYTWKNK
Ga0233401_107353023300028127SeawaterMSDEKYIVVTATSTHRMRYCIPVSELQKLNTYVDITNDIPKQIEWANDSVSSEEIKEFSQHYIGENIVDTFILDEERMLMMFDRDNEYLADWSKNKKIEYVHDWKEAITWKNK
Ga0308024_105826433300031140MarineMQELDERYAVVTTVSQFRQRYAIPVSELQKLNTEIDISSDVVKQVEWAQDSVTCEDVREFSQKWIGETIIDTVILDEERVLNLFDRDNDYLKEWTKKQKLEFFKEWQDKPND
Ga0307488_1003799723300031519Sackhole BrineMQKLDERYVVVTTVSQFRQRYAIPVSELQKLNTEIDISSDVVKQVEWAQDSVSCEDVREFSQKWIGETIMDTFILDEERVLNLFDRDNDYLKEWTKKQKLEFFKEWQGAD
Ga0307489_1002740823300031569Sackhole BrineMQKLDERYVVVTTVSQFRQRYAIPVSELQKLNTEIDISNDVVKQVEWAQDSVSCEDVREFSQKWIGETIMDTFILDEERVLNLFDRDNDYLKEWTKKQKLEFFKEWQGAD
Ga0307996_107797513300031589MarineDIFVPEERYVVVTTVSQFRQRYAIPVSELQKLNTDIDIMNDPARQVEWANDSVSMEDIKEFSQHYLGESIIDTFILDEERVKLMFNRDNDYLADWSDEKKMDFIKDWKQSK
Ga0307996_110908813300031589MarineVSELQKLNTEIDISSDVVKQVEWAQDSVTCEDVREFSQKWMGETIIDTFILDEERMLNLFDRDNDYLKEWTKKQKLEFFKEWQDKSND
Ga0307992_128878413300031601MarineMQELDERYAVVTTVSQFRKRYAIPVSELQKLNTEIDISSDVVKQVEWAQDSVTCEDVREFSQKWIGETIIDTVILDEERVLNLFDRDNDYLKEWTKKQ
Ga0307984_105351853300031658MarineVVTTVSQFRQRYAIPVSELQKLNTEIDISSDVVKQVEWAQDSVTCEDVREFSQKWIGETIIDTVILDEERVLNLFDRDNDYLKEWTKKQKLEFFKEWQDKPND
Ga0307998_101154333300031702MarineMQELDERYVVVTTVSQFRQRYAIPVSELQKLNTEIDISSDVVKQVEWAQDSVTCEDVREFSQKWMGETIIDTFILDEERMLNLFDRDNDYLKEWTKKQKLEFFKEWQDKSND
Ga0315320_1026729633300031851SeawaterMSNPKERYVVVTCISQFRQRYAIPVSELQALNPDVDISADPAKQIEWASDNVTCEKTKEFSQKWLGESIVDAMILDEERVVNLFDRDNDYLKEWTRNQKLDFISDWKEKDE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.