Basic Information | |
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Family ID | F101868 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 102 |
Average Sequence Length | 53 residues |
Representative Sequence | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKIR |
Number of Associated Samples | 82 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 3.92 % |
% of genes near scaffold ends (potentially truncated) | 24.51 % |
% of genes from short scaffolds (< 2000 bps) | 85.29 % |
Associated GOLD sequencing projects | 69 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (40.196 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (29.412 % of family members) |
Environment Ontology (ENVO) | Unclassified (69.608 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (77.451 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 18.87% β-sheet: 20.75% Coil/Unstructured: 60.38% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Deep Ocean Marine Marine Deep Subsurface Background Seawater Seawater Marine Marine Sediment Aqueous Sackhole Brine Marine Estuary Water Marine Estuarine Marine Marine Seawater Freshwater And Marine Marine Seawater Sediment Marine |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2010_100567187 | 3300000101 | Marine | MEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKQSDFTNKIR* |
DelMOSum2010_100674033 | 3300000101 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKIR* |
DelMOSum2010_100746123 | 3300000101 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKIRL* |
DelMOSum2010_102342863 | 3300000101 | Marine | MEVMILNGRRYLINTQVTDGGDYQCEHLLKQFPDDVEINWDEVKLSDFTNKIR* |
LPaug08P2610mDRAFT_10326722 | 3300000159 | Marine | MILNGKRYLINTQTHDGGDHQCEYLLKQFSDDVEIDWDEVKLSDFTNKIRL* |
BpDRAFT_100528641 | 3300000930 | Freshwater And Marine | RYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNXXXXXXXXX* |
JGI24006J15134_100432666 | 3300001450 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWGEVKLSDFTNKIR* |
JGI24006J15134_101247573 | 3300001450 | Marine | MEVLIINGRRYLINTSTPDGGDSICEWLLKQFRDEPELDWDTPKLSDFTNKIR* |
JGI24006J15134_101745173 | 3300001450 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPSDVEVDWDEVKLSDFTNKIR* |
JGI24006J15134_101805442 | 3300001450 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPLDVEVDWDEVKPSDFTNKIRL* |
JGI24006J15134_101971901 | 3300001450 | Marine | MEVMILNGKRYLINTQTHDGGDXQCEYLLKQFSDDVEIDWDEVKLSDFTNKIRL* |
JGI24003J15210_100909535 | 3300001460 | Marine | MEVLIINGRRYLINTSTPDGGDSICEWLIKQFRDEPELDWDTPKLSDFTNKIR* |
JGI24004J15324_100284926 | 3300001472 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKDTITTG* |
JGI24004J15324_101597642 | 3300001472 | Marine | MEVLIINGRRYLINTSTPDGGDSICEWLLKQFKDEPVLDWDHPKPSDFTNKIR* |
JGI24523J20078_10085004 | 3300001718 | Marine | MEVLIINGRRYLINTSTPDGGDSICEWLXKQFRDEPELDWDTPKLSDFTNKIR* |
JGI24513J20088_10096041 | 3300001720 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFSDDVEIDWDEVKLSDFTNKIRL* |
Ga0063282_10981565 | 3300003878 | Marine | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPPDVEVDWDEVKLSDFTNKIRL* |
Ga0066605_100215973 | 3300004279 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEAKLSDFTNKIR* |
Ga0066223_10564983 | 3300004461 | Marine | MDVPSKPSKNYCLVEVLIINGRRYLINTSTPDGGDSICEWLLKQFRDEPELDWDTPKLSDFTNK |
Ga0070727_104232211 | 3300005590 | Marine Sediment | VDVPSEPSKNYCLMEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKQSDFTNKIR* |
Ga0070726_102334026 | 3300005600 | Marine Sediment | MEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPK |
Ga0075466_10423236 | 3300006029 | Aqueous | NGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKQSDFTNKIR* |
Ga0075441_103346841 | 3300006164 | Marine | MQVMILNGERYLINTQTHDGGDQQCDHLLKQFPDNVEIDWDEVKSSDFTSKIRL* |
Ga0075447_1000368210 | 3300006191 | Marine | MEVLIINGRRYLINTSTSDGGDSICEWLLKQFKDEPVLDWDTPKLSDFTNKIR* |
Ga0075495_14584422 | 3300006399 | Aqueous | MEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKPSFYKQNTIITG* |
Ga0099972_102440211 | 3300006467 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPPDVEVDWDEVKLSDFTNKIRL* |
Ga0075467_105962163 | 3300006803 | Aqueous | RMDVPSEPSKNYCLMEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKPSDFTNKIR* |
Ga0070754_105326381 | 3300006810 | Aqueous | PSKNYCLMEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKPSDFTNKIR |
Ga0070750_101353025 | 3300006916 | Aqueous | PSKPSKNYCVMEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKQSDFTNKIR* |
Ga0075444_102619573 | 3300006947 | Marine | MEVLIINGRRYLINTSTPDGGDSICEWLLKQFKDEPVLDWDTPKLSDFTNKIR* |
Ga0102817_100247514 | 3300007555 | Estuarine | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKVR* |
Ga0102825_10118262 | 3300007655 | Estuarine | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKIR* |
Ga0105668_11266583 | 3300007758 | Background Seawater | MEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVIDWDQPKLSDFTNKIR* |
Ga0105741_11151031 | 3300007956 | Estuary Water | RYLINTQTHDGGDHQCEYLLKQFPDNVEIDWDEVKLSDFTNKIR* |
Ga0105745_10748263 | 3300007972 | Estuary Water | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPDNVEIDWDEVKLSDFTNKIR* |
Ga0105746_10727261 | 3300007973 | Estuary Water | DVSSEPSKNYCLMEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKQSDFTNKIR* |
Ga0105747_10694474 | 3300007974 | Estuary Water | MEVMILNGKRYLINTQTYDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKIR* |
Ga0102831_10601675 | 3300008996 | Estuarine | MEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKPSDFTNKIR* |
Ga0102816_10164054 | 3300008999 | Estuarine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKVR* |
Ga0114995_100898937 | 3300009172 | Marine | MEVLIINGRRYLINTSTPDGGDSICEWLLKQFRDEPELDWGTPKLSDFTNKIR* |
Ga0114915_10508111 | 3300009428 | Deep Ocean | MEVMILNGERYLINTQTHDGGDHQCDYLIKQFPDDVEIDWDEVKHSDFTNKIRL* |
Ga0115005_111715872 | 3300009432 | Marine | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPSDVEVDWDEVKLSDFTNKIRL* |
Ga0115003_108080552 | 3300009512 | Marine | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPSDVEVDWDEVKLSDFTNKIR* |
Ga0115001_102227482 | 3300009785 | Marine | MEVLIINGRRYLINTSTPDGGDSVCEWLIKQFRDEPELDWDTPKLSDFTNKIR* |
Ga0114922_102575096 | 3300011118 | Deep Subsurface | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKIRL* |
Ga0181419_11659532 | 3300017728 | Seawater | MEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKPSDFTNK |
Ga0181389_10540864 | 3300017746 | Seawater | MEVIILNGKRYLINTQVTDGGDHQCEHLLKQFPDDVEIDWDEVKLSDFTNKIR |
Ga0181389_10576514 | 3300017746 | Seawater | MEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKPSD |
Ga0181430_11279551 | 3300017772 | Seawater | LMEVMILNGRRYLINTQVTDGGDYQCEHLLKQFPDDVEIDWDEVKLSDFTNKIR |
Ga0206125_102929102 | 3300020165 | Seawater | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKIRL |
Ga0211690_10376006 | 3300020335 | Marine | GERYLINTQTHDGGDHQCDYLIKQFPDDVEIDWDEVKHSDFTNKIRL |
Ga0211689_10181286 | 3300020358 | Marine | MEVMILNGERYLINTQTHDGGDHQCDYLIKQFPDDVEIDWDEVKHSDFTNKIRL |
Ga0211677_102715252 | 3300020385 | Marine | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEAKLSDFTNEIRL |
Ga0211678_102115271 | 3300020388 | Marine | INGRRYLINTQVTDGGDYQCEHLLKQFPPDAEIDWDEAKPSDFTNEIRL |
Ga0211576_104133444 | 3300020438 | Marine | KRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKIR |
Ga0210334_108756682 | 3300021859 | Estuarine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKIR |
Ga0212023_10196324 | 3300022061 | Aqueous | MEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKQSDFTNKIR |
Ga0224503_103172292 | 3300022201 | Sediment | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKIR |
Ga0224509_102146542 | 3300022306 | Sediment | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKVR |
(restricted) Ga0233412_100462334 | 3300023210 | Seawater | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPPDVEVDWDEVKPSDFTNKIRL |
(restricted) Ga0255049_101762375 | 3300024517 | Seawater | RYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKIR |
Ga0207905_10111855 | 3300025048 | Marine | MEVLIINGRRYLINTSTPDGGDSICEWLLKQFRDEPELDWDTPKLSDFTNKIR |
Ga0207905_10132846 | 3300025048 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPLDVEVDWDEVKP |
Ga0207905_10214444 | 3300025048 | Marine | MEVLIINGRRYLINTSTPDGGDSICEWLIKQFRDEPELDWDTPKLSDFTNKIR |
Ga0207896_10103152 | 3300025071 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWGEVKLSDFTNKIR |
Ga0207896_10139183 | 3300025071 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFSDDVEIDWDEVKLSDFTNKIRL |
Ga0208298_10023916 | 3300025084 | Marine | MEILIINGRRYLINTQVTDGGDYQCEHLLKQFPPDAEIDWDEAKPSDFTNEIRL |
Ga0209535_100718911 | 3300025120 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPLDVEVDWDEVKSSDFTNKIRL |
Ga0209535_11163342 | 3300025120 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPEDVEIDWDEVKLSDFTNKIR |
Ga0209535_12001442 | 3300025120 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPSDVEVDWDEVKLSDFTNKIR |
Ga0209336_101120683 | 3300025137 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPPDVEVDWDEVKLSDFTNKIRL |
Ga0209634_12815821 | 3300025138 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPPDVEVDWDEVKPSDFTNKIRL |
Ga0208031_10224324 | 3300025237 | Deep Ocean | MQVMILNGERYLINTQTHDGGDQQCDHLLKQFPDNVEIDWDEVKSSDFTSKIRL |
Ga0208032_100138521 | 3300025266 | Deep Ocean | MEVLIINGRRYLINTSTPDGGDSICEWLLKQFKDEPVLDWDTPKLSDFTNKIR |
Ga0208814_10265412 | 3300025276 | Deep Ocean | MEVLIIDGRRYLINTSTPDGGDSVCEWLLKQYDKTALVEFSEVTHADFTNKIRL |
Ga0208814_10628241 | 3300025276 | Deep Ocean | ILNGERYLINTQTHDGGDHQCDYLIKQFPDDVEIDWDEVKHSDFTNKIRL |
Ga0208643_10001194 | 3300025645 | Aqueous | MDVPSEPSKNYCLMEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKQSDFTNKIR |
Ga0209374_100505820 | 3300025705 | Marine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEAKLSDFTNKIR |
Ga0208941_10039607 | 3300027077 | Marine | MEVMILNGRRYLINTQVTDGGDHQCEHLLKQFPDDVEIDWDEVKLSDFTNKIR |
Ga0208797_10061712 | 3300027186 | Estuarine | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKVR |
Ga0208674_10157344 | 3300027190 | Estuarine | MEVLVINGRRYLINTSTQDGGDSICEWLLKQFKDEPVLDWDQPKPSDFTNKIR |
Ga0208438_10482252 | 3300027196 | Estuarine | MEVMILNGKRYLINTQTHNGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKVR |
Ga0209482_10604301 | 3300027668 | Marine | PSKLSKNYCLMEVLIINGRRYLINTSTPDGGDSICEWLLKQFKDEPVLDWDTPKLSDFTNKIR |
Ga0209816_10200274 | 3300027704 | Marine | MEVLIINGRRYLINTSTSDGGDSICEWLLKQFKDEPVLDWDTPKLSDFTNKIR |
Ga0209121_101758081 | 3300027742 | Marine | MEVMILNGRRYLINTQVTDGGDYQCEHLLKQFPDDVEIDWDEVKLSDFTNKIR |
Ga0209192_101254241 | 3300027752 | Marine | MEVLIINGRRYLINTSTPDGGDSICEWLLKQFRDEPELDWGTPKLSDFTNKIR |
Ga0208671_102011181 | 3300027757 | Estuarine | RYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKVR |
Ga0209379_101239844 | 3300027758 | Marine Sediment | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPPDVEVDWDEVKLSDFTNKIRL |
Ga0209379_102561181 | 3300027758 | Marine Sediment | MEVMILNGKRYLINTQTHDGGDHQCEYLLKQFPDDVEIDWDEVKLSDFTNKIRL |
Ga0209830_100112505 | 3300027791 | Marine | MEVLIINGSRYLINTSTLDGGDSICEWLLKQFRNEPELDWDTPKLSDFTNKIR |
Ga0307488_100189373 | 3300031519 | Sackhole Brine | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPPDVEVDWDEVKLSDFTNKIR |
Ga0307488_102324065 | 3300031519 | Sackhole Brine | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPSDVEVDWDEVKLSDFTNKIR |
Ga0307488_103881143 | 3300031519 | Sackhole Brine | MEVLIINGRRYLINTSTPDGGDSICEWLLKQFKDEPELDWDTPKLSDFTNKIR |
Ga0307488_104468843 | 3300031519 | Sackhole Brine | MEVLIINGRRYLINTSTPDGGDSVCEWLLKQFRNEPELDWDTPKLSDFTNKIR |
Ga0307488_108354702 | 3300031519 | Sackhole Brine | MEVLIINSRRYLINTSTPDGGDSICEWLLKQFRDEPELDWDTPKLSDFTNKIR |
Ga0307489_104516462 | 3300031569 | Sackhole Brine | MILNGKRYLINTQTHDGGDHQCEYLLKQFPSDVEVDWDEVKLSDFTNKIRL |
Ga0302126_100359287 | 3300031622 | Marine | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPLDVEVDWDEVKPSDFTNKIR |
Ga0308014_11051913 | 3300031628 | Marine | LMQVMILNGERYLINTQTHDGGDQQCDHLLKQFPDNVEIDWDEVKSSDFTSKIRL |
Ga0302125_101795692 | 3300031638 | Marine | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPLDVEVDWDEVKP |
Ga0308011_102676122 | 3300031688 | Marine | MQIMILNGERYLINTQTHDGGDQQCDHLLKQFPDNVEIDWDEVKSSDFTSKIRL |
Ga0302130_10404002 | 3300031700 | Marine | MEVMILNGRRYLINTQTHDGGDHQCEYLLKQFPLDVEVDWDEVKPLDFTNKIR |
Ga0308000_101734512 | 3300031848 | Marine | MILNGERYLINTQTHDGGDQQCDHLLKQFPDNVEIDWDEVKSSDFTSKIRL |
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