Metagenome / Metatranscriptome Family F101852

Overview

Basic Information

• Family ID: F101852
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 102
• Average Sequence Length: 53 residues
• Representative Sequence: MTKKQKKMIEDHKKRMYDMRVFGLDWQGIHQKRWDEDSLCWEDKCDCEKVKEV
• Number of Associated Samples: 69
• Number of Associated Scaffolds: 102

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 45.83 %
• % of genes near scaffold ends (potentially truncated): 22.55 %
• % of genes from short scaffolds (< 2000 bps): 76.47 %
• Associated GOLD sequencing projects: 62
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (79.412 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (50.980 % of family members)
• Environment Ontology (ENVO): Unclassified (92.157 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (88.235 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 33.33%
  β-sheet: 0.00%
  Coil/Unstructured: 66.67%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01327	Pep_deformylase	21.57
PF00478	IMPDH	14.71
PF00313	CSD	11.76
PF00565	SNase	5.88
PF01764	Lipase_3	2.94
PF02810	SEC-C	0.98
PF00011	HSP20	0.98
PF01555	N6_N4_Mtase	0.98
PF05050	Methyltransf_21	0.98
PF04069	OpuAC	0.98
PF01242	PTPS	0.98
PF02229	PC4	0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	21.57
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	0.98
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.98
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.98
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.98

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.41 %
All Organisms	root	All Organisms	20.59 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.41 %
Viruses	superkingdom	All Organisms → Viruses	17.65 %
cellular organisms	root	All Organisms → cellular organisms	2.94 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.96 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.98 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	0.98 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.98 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.96 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.98 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.98 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.98 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.98 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.96 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.98 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	0.98 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.98 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.98 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.96 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.98 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.98 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.98 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.98 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.96 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.98 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.98 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.98 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.98 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.96 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.98 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.98 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.98 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.98 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000216|SI53jan11_150mDRAFT_c1045467	Not Available	765
3300000947|BBAY92_10121493	Not Available	691
3300001683|GBIDBA_10002818	Not Available	15413
3300002484|JGI25129J35166_1030043	Not Available	1156
3300002519|JGI25130J35507_1001373	Not Available	7520
3300002519|JGI25130J35507_1054366	Not Available	787
3300002919|JGI26061J44794_1084216	Not Available	552
3300004639|Ga0066620_1245910	Not Available	929
3300005400|Ga0066867_10002522	Not Available	8804
3300005402|Ga0066855_10234751	Not Available	599
3300005402|Ga0066855_10336218	Not Available	500
3300005422|Ga0066829_10181974	Not Available	620
3300005514|Ga0066866_10341547	Not Available	507
3300005520|Ga0066864_10108847	Not Available	804
3300005521|Ga0066862_10107026	Not Available	954
3300005605|Ga0066850_10028805	All Organisms → Viruses → Predicted Viral	2296
3300005969|Ga0066369_10071848	Not Available	1201
3300006002|Ga0066368_10017170	All Organisms → Viruses → Predicted Viral	2550
3300006166|Ga0066836_10064438	Not Available	2091
3300006310|Ga0068471_1416315	All Organisms → Viruses → Predicted Viral	1319
3300006310|Ga0068471_1463736	Not Available	854
3300006313|Ga0068472_10890867	Not Available	616
3300006316|Ga0068473_1082264	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	552
3300006338|Ga0068482_1040834	Not Available	865
3300006339|Ga0068481_1221101	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1785
3300006339|Ga0068481_1516099	Not Available	550
3300006340|Ga0068503_10188221	Not Available	5033
3300006340|Ga0068503_10719824	Not Available	576
3300006340|Ga0068503_10722396	All Organisms → cellular organisms → Bacteria	721
3300006341|Ga0068493_10230455	All Organisms → Viruses → Predicted Viral	1625
3300006347|Ga0099697_1041883	Not Available	625
3300006736|Ga0098033_1068350	All Organisms → Viruses → Predicted Viral	1029
3300006738|Ga0098035_1022568	All Organisms → Viruses → Predicted Viral	2439
3300006753|Ga0098039_1193066	Not Available	690
3300006753|Ga0098039_1195494	Not Available	685
3300006754|Ga0098044_1127908	All Organisms → Viruses → Predicted Viral	1028
3300006900|Ga0066376_10452090	Not Available	729
3300006902|Ga0066372_10292414	Not Available	919
3300006926|Ga0098057_1062026	Not Available	913
3300006927|Ga0098034_1110742	Not Available	783
3300007291|Ga0066367_1326677	Not Available	606
3300008050|Ga0098052_1213012	Not Available	747
3300008219|Ga0114905_1064684	Not Available	1319
3300008219|Ga0114905_1205656	Not Available	633
3300009104|Ga0117902_1602086	Not Available	879
3300009481|Ga0114932_10275359	All Organisms → Viruses → Predicted Viral	1011
3300009605|Ga0114906_1034487	All Organisms → cellular organisms → Bacteria	1999
3300009703|Ga0114933_10665382	Not Available	668
3300010151|Ga0098061_1148748	Not Available	850
3300010155|Ga0098047_10104505	Not Available	1104
3300010155|Ga0098047_10207176	Not Available	750
3300010155|Ga0098047_10273520	Not Available	640
3300017704|Ga0181371_1046982	Not Available	704
3300017775|Ga0181432_1026162	Not Available	1540
3300017775|Ga0181432_1084606	Not Available	930
3300017775|Ga0181432_1107837	Not Available	834
3300017775|Ga0181432_1140709	Not Available	737
3300017775|Ga0181432_1170514	All Organisms → Viruses → environmental samples → uncultured virus	675
3300017775|Ga0181432_1237420	Not Available	574
3300020373|Ga0211660_10032262	Not Available	2442
3300020373|Ga0211660_10189402	Not Available	716
3300020410|Ga0211699_10011261	All Organisms → Viruses → Predicted Viral	3623
3300020448|Ga0211638_10178275	Not Available	970
3300021791|Ga0226832_10279397	Not Available	675
3300022225|Ga0187833_10291210	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	911
3300022227|Ga0187827_10003464	Not Available	20353
(restricted) 3300024259|Ga0233437_1059023	All Organisms → Viruses → Predicted Viral	2167
3300025078|Ga0208668_1016926	Not Available	1509
3300025108|Ga0208793_1188432	Not Available	523
3300025109|Ga0208553_1081230	Not Available	768
3300025112|Ga0209349_1016024	All Organisms → Viruses → Predicted Viral	2748
3300025112|Ga0209349_1057016	Not Available	1203
3300025122|Ga0209434_1001636	Not Available	10082
3300025122|Ga0209434_1155518	Not Available	618
3300025125|Ga0209644_1063175	Not Available	857
3300025125|Ga0209644_1093652	Not Available	708
3300025280|Ga0208449_1060381	Not Available	986
3300025873|Ga0209757_10006184	Not Available	3077
3300025873|Ga0209757_10074615	Not Available	1019
3300025873|Ga0209757_10286957	Not Available	524
3300026079|Ga0208748_1081230	Not Available	834
3300026087|Ga0208113_1009291	Not Available	3540
3300026209|Ga0207989_1028508	Not Available	1721
3300026269|Ga0208766_1033108	All Organisms → Viruses → Predicted Viral	1763
3300028190|Ga0257108_1020021	All Organisms → Viruses → Predicted Viral	2006
3300028190|Ga0257108_1031341	All Organisms → Viruses → Predicted Viral	1604
3300028192|Ga0257107_1033470	Not Available	1621
3300028192|Ga0257107_1040208	Not Available	1460
3300028192|Ga0257107_1128152	Not Available	748
3300028489|Ga0257112_10058358	All Organisms → Viruses → Predicted Viral	1428
3300028489|Ga0257112_10161498	Not Available	795
3300032278|Ga0310345_10126982	Not Available	2257
3300032278|Ga0310345_10189180	Not Available	1861
3300032278|Ga0310345_10800789	Not Available	917
3300032278|Ga0310345_11308962	Not Available	709
3300032278|Ga0310345_11868446	Not Available	585

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.02%
Host-Associated	Host-Associated	0.98%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.02%
Algae	Host-Associated → Algae	0.98%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.02%
Green Algae	Host-Associated → Algae → Green Algae	0.98%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	81.37%
Strait	Environmental → Aquatic → Marine → Strait	5.88%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.90%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.96%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.96%
Inlet	Environmental → Aquatic → Marine → Inlet	0.98%
Coastal	Environmental → Aquatic → Marine → Coastal	0.98%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.98%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.98%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	68.63%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	8.82%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.90%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.92%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.98%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.98%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.98%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.98%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	50.98%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	8.82%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	6.86%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	6.86%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	5.88%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.90%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	3.92%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	3.92%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.96%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.98%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.98%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.98%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.98%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.98%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.98%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300000216	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 53 01/11/11 150m	Environmental
3300000947	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92	Host-Associated
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental
3300002919	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV	Environmental
3300004639	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI048_120m_RNA (Metagenome Metatranscriptome)	Environmental
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental
3300005402	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73	Environmental
3300005422	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43	Environmental
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental
3300005520	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251	Environmental
3300005521	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255	Environmental
3300005597	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF51B	Environmental
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental
3300005969	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_A	Environmental
3300006002	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A	Environmental
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental
3300006316	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_1000m	Environmental
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental
3300007291	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A	Environmental
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental
3300020373	Marine microbial communities from Tara Oceans - TARA_B100000959 (ERX555949-ERR598946)	Environmental
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental
3300020448	Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)	Environmental
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental
3300024259 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MG	Environmental
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental
3300026079	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_A (SPAdes)	Environmental
3300026087	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A (SPAdes)	Environmental
3300026209	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65 (SPAdes)	Environmental
3300026269	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263 (SPAdes)	Environmental
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental
3300028489	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000m	Environmental
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SI53jan11_150mDRAFT_10454671	3300000216	Marine	MSEQELTKRQNRMIETHKKRMYHLRVNGLDWQATHQRRWEENSPCWEDKCDCKFKRG
BBAY92_101214932	3300000947	Macroalgal Surface	MTKKQKKMIEDHKKRMYDMRVFGLDWQEIHQKRWGKDSLCWEDKCDCKFVKGT*
GBIDBA_1000281831	3300001683	Hydrothermal Vent Plume	MSEQELTKRQKGMIETHKKRMYHLRVNGLDWQATHQRRWEENSPCWEDKCNCKFVKGT*
JGI25129J35166_10300434	3300002484	Marine	VTKKQTKMIKDHKKRMFHMRVFGLDWQATHQKRWDEDTLCFEDKCDCKLVRGMG*
JGI25130J35507_100137320	3300002519	Marine	MKDKKKMIIDHKKRMYHLRVNGLDWQATHQRRWEENSPCWEDKCDCKFVKGT*
JGI25130J35507_10543662	3300002519	Marine	MISDHKKRMYDMRVFGLDWQASHQRRWEDNSPCWEDKCDCNTVKGTG*
JGI26061J44794_10842162	3300002919	Marine	KKQKKIIEKHKERMYHMRVFSLDWQEIHQKRWDEDSLCWEDKCDCEPVNADG*
Ga0066620_12459103	3300004639	Marine	MSEQELTKRQNRMIETHKKRMYHLRVNGLDWQATHQRRWEENSPCWEDKCDCKFKRGT*
Ga0066867_1000252219	3300005400	Marine	MGVDKLTKRQKEMIETHKKRMYHLRVFGLDWQATHQRRWEDDSPCWVDECDCKFVKGAD*
Ga0066867_103401723	3300005400	Marine	MISDHKKRMYDMRVFGLDWQASHQRRWEDNSPCWEDKCDCNT
Ga0066855_102347512	3300005402	Marine	MTKKQKKMIEEHKKRMYDMRVFGLDWQATHQKRWDEDSLCWEDKCDCEN*
Ga0066855_103362181	3300005402	Marine	MNKKQKEMIKNHKERMLHMRVFGLDWQATHQKRWDEDTLCFEDKCDCKPVKGVE*
Ga0066829_101819743	3300005422	Marine	KKMISDHKKRMYDMRVFGLDWQASHQRRWEDNSPCWEDKCDCNTVKGTG*
Ga0066866_103415473	3300005514	Marine	TKKQKKMIETHKEHMYNMRFFGLEWQATHQRRWEDNSPCWEDKCECEKVKE*
Ga0066864_101088473	3300005520	Marine	MGVDKLTKRQKEMIETHKKRMYHLRVNNEDWQLTHQKRWDDDSLCWEDKCDCKFVKGAD*
Ga0066862_101070261	3300005521	Marine	MIETHKEHMYNMRFFGLEWQATHQRRWEDNSPCWEDKCECEKVKE*
Ga0066832_102658693	3300005597	Marine	MISDHKKRMYDMRVFGLDWQASHQRRWEDNSPCWEDKCD
Ga0066850_100288055	3300005605	Marine	MTKKQKKMIKDHKKRMYNMRFFGLNWQEIHQKRWDGDDCLNDTCDCVEIYNEKT*
Ga0066369_100718482	3300005969	Marine	MTKKQKKIIEKHKERMYHMRVFSLDWQEIHQKRWDEDSLCWEDKCDCEPVNADG*
Ga0066368_100171704	3300006002	Marine	MNKKQKEMIKNHKERMLHMRVFGLDWQATHQKRWDEDSLCWEDKCDCKPVKGVD*
Ga0066836_100644383	3300006166	Marine	MLTKKQKKMIETHKEHMYNMRFFGLEWQATHQRRWEDNSPCWEDKCECEKVKE*
Ga0068471_14163152	3300006310	Marine	MNKKQKEMIKNHKERMFHMRVFGLDWQATHQKRWGEDTLCFEDKCDCKPVKGVE*
Ga0068471_14637362	3300006310	Marine	MLTKEQKKIIKKHKERMYHMRVFGLDWQGIHQKRWDEDSLCWEDKCDCEN*
Ga0068472_108908671	3300006313	Marine	MNKKQKEMIKNHKERMLHMRVFGLDWQATHQKRWDEDTLCCEDKCDCKLVKGVE*
Ga0068473_10822641	3300006316	Marine	MNKKQKEIIKNHKERMFHMRVFGLDWQATHQKRWDEDTLCFEDKCDCEETQVSKVGFQ
Ga0068482_10408342	3300006338	Marine	MMTNEQKKMIKEHKRRMYHMRAFSTNWQLTHQKRWGEDSLCWYDKCDCKPKKEEGD*
Ga0068481_12211012	3300006339	Marine	MTNKQKKMIKNHKKRMYHLRVFGLDWQATHQRRWEENSPCWEDKCDCKFVSGI*
Ga0068481_15160993	3300006339	Marine	MGVDKMKQELIKKQNKMIEDHKKRMFHMRVFGLDWQATHQKRWDVDTLCFVDKCNCKFVKGT*
Ga0068503_1018822110	3300006340	Marine	MTKKQKKMVEDHKERMYHMRVFGLDWQGIHQKRWDEDSLCWEDKCDCEN*
Ga0068503_104640481	3300006340	Marine	HKKRMYDMRVFGLDWQELHQKRWGEDSLCWEDKCDCENYDFFIF*
Ga0068503_107198241	3300006340	Marine	LVLSKKEMIKNHKERMFHMRVFGLDWQATHQKRWDEDTLCFEDKCDCKPVKGVE*
Ga0068503_107223962	3300006340	Marine	MLTKEQKKIIKNHKERMYHMRVFGLNWQGIHQKRWDEDSLCWEDKCDCEN*
Ga0068493_102304554	3300006341	Marine	MNKKQKEMIKNHKERMFHMRVFGLDWQATHQKRWGEDSLCWEDKCDCKPVKGVE*
Ga0099697_10418833	3300006347	Marine	MNKKQKEMIKNHKERMLHMRVIGLDWQATHQKRWDEDTLCFEDKCDCKPVKGVE*
Ga0098033_10683502	3300006736	Marine	MTKRQKKMIEKHKKNMFHMRVFGLDWQATHQKRWGEDSLCWEGKCDCKFVKGT*
Ga0098035_10225682	3300006738	Marine	MLTKEQKKMIKDHKKRMYDMRVFGLDWQGIHQKRWDEDSLCWEDKCDCEKVKEV*
Ga0098039_11930661	3300006753	Marine	KKMIKKHKKRMYHLRVNNEDWQLTHQKRWDEDTLCFEDKCDCESVKDTEGLNV*
Ga0098039_11954941	3300006753	Marine	KMIKDHKKRMYDMRVFGLDWQGIHQKRWDEDSLCWEDKCDCENVKSI*
Ga0098044_11279082	3300006754	Marine	MLTKEQKKMIKDHKKRMYDMRVFGLDWQGIHQKRWDEDTLCFEDKCDCESVKDTEGLNV*
Ga0066376_104520902	3300006900	Marine	MNKKQKEMIKNHKERMLHMRVFGLDWQATHQKRWDEDSLCWEDKCDCKPVKGVE*
Ga0066372_102924143	3300006902	Marine	MGGNKMKQELIKKQKKMIKNHKERMFHMRVFGLDWQATHRKRWDEDTLCFEDKCDCKFVK
Ga0098057_10080111	3300006926	Marine	DHKKRMYHLRVNGLDWQATHQRRWEENSPCWEDKCDCKFVKGT*
Ga0098057_10620262	3300006926	Marine	MTKKQKNMIEEHKKRMYDMRVFGLDWQATHQKRWGEDSLCWEDKCDCKFVKGAD*
Ga0098034_11107421	3300006927	Marine	WWSNNLMLTKEQKKMIKDHKKRMYDMRVFGLDWQGIHQKRWDEDSLCWEDKCDCEKVKEV
Ga0066367_13266772	3300007291	Marine	MTNKQKKMIKNHKKRMYHLRVFGLDWQATHQRRWEENSPCWGDKCDCKFVSGI*
Ga0098052_12130122	3300008050	Marine	MTKKQKKMIKDHKKRMYNMRFFGLNWQEIHQKRWDGDDCLNDTCDCVEIYNE
Ga0114905_10646843	3300008219	Deep Ocean	MTKKQKKMIKDHKKRMYEMRVFGLDWQELHQKRWSEDSLCWEDKCDCENVKSI*
Ga0114905_12056561	3300008219	Deep Ocean	MTKKQKKMIEDHKKRMYDMRVFGLDWQELHQKRWGEDSLCWEDKCDCENVKSI*
Ga0117902_16020863	3300009104	Marine	MIDEHKKRMYHLRVFGLDWQATHQRRWEDNSPCWEDKCDCKFVKGT*
Ga0114932_102753593	3300009481	Deep Subsurface	MFTEKQKKMIEIHKEHMYNMRFFGLEWQATHQRRWKNNSPCWEGKCECEKVKE*
Ga0114906_10344872	3300009605	Deep Ocean	MTKKQKKMIEDHKKRMYDMRVFGLDWQELHQKRWGEDSLCWEDKCDCENQKI*
Ga0114933_106653821	3300009703	Deep Subsurface	MFTEKQKKMIEIHKEHMYNMRFFGLEWQATHQRRWENNSPCWEGKCECEKVKE
Ga0098061_11487484	3300010151	Marine	MEQELTKRQKKMIKKHKKRMYHLRVFGLDWQATHQRRWEDDSPCWVDECDCKFVKGAD*
Ga0098047_101045053	3300010155	Marine	VEQKLIKRQKKMISDHKKRMYDMRVFGLDWQASHQRRWEDNSPCWEDKCDCNTVKGTG*
Ga0098047_102071763	3300010155	Marine	MGVNKMKQELIKKQKKMIKNHKERMFHMRVFGLDWQATHQKRWDEDTLCFEDRCDCKFVKGT*
Ga0098047_102735202	3300010155	Marine	MTKKQKNMIEEHKKRMYDMRVFGLDWQATHQKRWGEDSLCWEDKCDCKKVKEV*
Ga0181371_10469822	3300017704	Marine	KKKMIKDHKKRMYDMRVFGLDWQGIHQKRWDEDSLCWEDKCDCEKVKEV
Ga0181432_10261622	3300017775	Seawater	MISDHKKRMYDMRVFGLDWQASHQRRWEDNSPCWEDKCDCNTVKGTG
Ga0181432_10846061	3300017775	Seawater	MTKKQKKMIEDHKKRMYDMRVFGLDWQGIHQKRWDEDSLCWEDKCDCEKVKEV
Ga0181432_11078372	3300017775	Seawater	MLTKEQKKIIKNHKERMYHMRVFGLNWQGIHQKRWDEDSLCWEDKCDCEN
Ga0181432_11407093	3300017775	Seawater	VTKKQTKMIKDHKKRMFHMRVFGLDWQATHQRRWEDDSPCWVDECDCKFVKGAD
Ga0181432_11705143	3300017775	Seawater	MNKKQKKMIKKHKKRMYHLRVNNEDWQLTHQKRWDEDTLCFEDKCDCESMKGTD
Ga0181432_12374202	3300017775	Seawater	VNKKQKKTIKNHKERMFHMRVFGLDWQATHQKRWDEGTLCFENKCDCKLVKGVE
Ga0211660_100322624	3300020373	Marine	MEQELTKRQKKMIKKHKKRMYHLRVFGLDWQATHQRRWEDDSPCWVDECDCKFVKGAD
Ga0211660_101894022	3300020373	Marine	MLTKEQKKMIKDHKKRMYDMRVFGLDWQGIHQKRWDEDSLCWEDKCDCEKVKEV
Ga0211699_100112616	3300020410	Marine	MTKEQEKMIEDFRQRMYSMRFANEDWQLTHQKRWDEDSLCWDDKCDCEKKNERT
Ga0211638_101782753	3300020448	Marine	MTKEQEKMIEDFRQRMHSMRFANEDWQLTHQKRWDEDSLCWDDKCDCEKKNERT
Ga0211642_104461484	3300020449	Marine	MKDKKKMIKDHKIRMYNMRASGLKWQEIHQKRWGEDSLCQEDTCDC
Ga0226832_102793972	3300021791	Hydrothermal Vent Fluids	MGNLYWWPDNIMLTKEQKKIIKKHKERMYHMRVFGLDWQETHQKRWGEDSLCWEDKCDCE
Ga0187833_102912104	3300022225	Seawater	MGVDKLTKRQKEMIETHKKRMYHLRVNNEDWQLTHQKRWDDDSLCWEDKC
Ga0187827_100034644	3300022227	Seawater	MGVDKLTKRQKEMIETHKKRMYHLRVFGLDWQATHQRRWEDDSPCWVDECDCKFVKGAD
(restricted) Ga0233437_10590234	3300024259	Seawater	MSEQELTKRQNRMIETHKKRMYHLRVNGLDWQATHQRRWEENSPCWEDKCDCKFKRGT
Ga0208668_10169263	3300025078	Marine	MKDKKKMIIDHKKRMYHLRVNGLDWQATHQRRWEENSPCWEDKCDCKFVKGT
Ga0208793_11884321	3300025108	Marine	MTKKQKKMIKDHKKRMYNMRFFGLNWQEIHQKRWDGDDCLNDTCDCVEIYNEKT
Ga0208553_10812304	3300025109	Marine	MGVDKLTKRQKEMIETHKKRMYHLRVNNEDWQLTHQKRWDDDSLCWEDKCDCKFVKGAD
Ga0209349_10160244	3300025112	Marine	VTKKQTKMIKDHKKRMFHMRVFGLDWQATHQKRWDEDTLCFEDKCDCKLVRGMG
Ga0209349_10570163	3300025112	Marine	MNKKQKEMIKNHKERMFHMRVFGLDWQATHQKRWDEDTLCFEDRCDCKFVKGT
Ga0209434_100163622	3300025122	Marine	VNKKQKKTIKNHKERMFHMRVFGLDWQATHQKRWDEDTLCFEDKCDCKFVKGT
Ga0209434_10666181	3300025122	Marine	MKDKKKMIKDHKIRMYNMRASGLKWQEIHQKRWGEDSLCQEDTCDCE
Ga0209434_11555184	3300025122	Marine	YRRNGEIMTKRQKKMIEKHKKNMFHMRVFGLDWQATHQKRWGEDSLCWEGKCDCKFVKGT
Ga0209644_10631753	3300025125	Marine	MMTNEQKKMIKEHKRRMYHMRAFSTNWQLTHQKRWGEDSLCWYDKCDCKPKKEE
Ga0209644_10936522	3300025125	Marine	RLIKEHKERMYHMRVFGLDWQETHQKRWTNDTLCFDDKCDCETVKEV
Ga0208449_10603813	3300025280	Deep Ocean	MTKKQKKMIEDHKKRMYDMRVFGLDWQELHQKRWGEDSLCWEDKCDCENVKSI
Ga0209757_100061841	3300025873	Marine	MTNKQKKMIKNHKKRMYHLRVFGLDWQATHQRRWEENSPCWEDKCDCKFVS
Ga0209757_100746151	3300025873	Marine	MIKNHKKRMYHLRVFGLDWQATHQRRWEENSPCWEDKCDCKFVKGTD
Ga0209757_102869573	3300025873	Marine	DRRLIKEHKERMYHMRVFGLDWQEIHQKRWTNDTLCFDDKCDCEESDG
Ga0208748_10812302	3300026079	Marine	MTKKQKKIIEKHKERMYHMRVFSLDWQEIHQKRWDEDSLCWEDKCDCEPVNADG
Ga0208113_10092916	3300026087	Marine	MNKKQKEMIKNHKERMLHMRVFGLDWQATHQKRWDEDSLCWEDKCDCKPVKGVD
Ga0207989_10285085	3300026209	Marine	MLTKKQKKMIETHKEHMYNMRFFGLEWQATHQRRWEDNSPCWEDKCECEKVKE
Ga0208766_10331086	3300026269	Marine	TKKQKKMIETHKEHMYNMRFFGLEWQATHQRRWEDNSPCWEDKCECEKVKE
Ga0257108_10200211	3300028190	Marine	MNKKQKEMIKNHKERMFHMRVFGLDWQATHQKRWDEDTLCFEDKCDCKPVKGVE
Ga0257108_10313413	3300028190	Marine	MGNLYWWPDNIMLTKEQKKIIKKHKERMYHMRVFGLDWQGIHQKRWDEDSLCWEDKCDCE
Ga0257107_10334702	3300028192	Marine	MGVDKLTQRQKEMIETHKKRMYHLRVNGLDWQATHQRRWEENSPCWEDKCDCKFVKGT
Ga0257107_10402081	3300028192	Marine	MGNLYWWPDNIMLTKEQKKIIKKHKERMYHMRVFGLDWQGIHQKRWDEDTLCFEDKCNCEKVKES
Ga0257107_11281524	3300028192	Marine	KKQKEMIKNHKERMYDMRVFGLDWQATHQKRWGEDTLCFEDKCDCKFVKGI
Ga0257112_100583584	3300028489	Marine	MNKKQKEIIKNHKERMLHMRVFGLDWQATHQKRWDEDTLCFEDKCDCKPVKGVE
Ga0257112_101614983	3300028489	Marine	MLTKEQKKMIKNHKERMYHMRVFGLDWQATHQKRWDEDTLCFEDKCDCEKVKES
Ga0310345_101269821	3300032278	Seawater	MTKKQKKMVEDHKERMYHMRVFGLDWQGIHQKRWGEDSLCWEDKCDCEKVKEV
Ga0310345_101891804	3300032278	Seawater	MLTKEQNKMIKDHKKRMYDMRVFGLDWQGIHQKRWDEDSLCWEDKCDCEKVKEV
Ga0310345_108007893	3300032278	Seawater	MGVDKMKQELIKKQNKMIEDHKKRMFHMRVFGLDWQATHQKRWDVDTLCFVDKCNCKFVKGT
Ga0310345_113089623	3300032278	Seawater	MNKKQKEMIKNHKERMLHMRVFGLDWQATHQKRWDEDTLCFEDKCDCKLVRGMG
Ga0310345_118684461	3300032278	Seawater	MNKKQKEMIKNHKERMLHMRVFGLDWQATHQKRWGEDSLCWEDKCDCKPVKGVE