Metagenome Family F101850

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101850
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	48 residues
Representative Sequence	MFYINNVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGELESTSV
Number of Associated Samples	54
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	50.98 %
% of genes from short scaffolds (< 2000 bps)	82.35 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (44.118 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (46.078 % of family members)
Environment Ontology (ENVO)	Unclassified (87.255 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (99.020 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.59% β-sheet: 0.00% Coil/Unstructured: 90.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF02511	Thy1	27.45
PF02445	NadA	6.86
PF01503	PRA-PH	2.94
PF07690	MFS_1	2.94
PF01145	Band_7	1.96
PF05050	Methyltransf_21	1.96
PF13614	AAA_31	1.96
PF00313	CSD	1.96
PF00657	Lipase_GDSL	1.96
PF13365	Trypsin_2	0.98
PF00089	Trypsin	0.98
PF13231	PMT_2	0.98
PF07995	GSDH	0.98
PF13414	TPR_11	0.98
PF08410	DUF1737	0.98
PF02749	QRPTase_N	0.98
PF09940	DUF2172	0.98
PF06041	DUF924	0.98
PF00288	GHMP_kinases_N	0.98
PF00535	Glycos_transf_2	0.98
PF06945	DUF1289	0.98
PF00578	AhpC-TSA	0.98
PF00571	CBS	0.98
PF13489	Methyltransf_23	0.98
PF09834	DUF2061	0.98
PF00708	Acylphosphatase	0.98
PF13847	Methyltransf_31	0.98
PF06094	GGACT	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	27.45
COG0379	Quinolinate synthase	Coenzyme transport and metabolism [H]	6.86
COG0157	Nicotinate-nucleotide pyrophosphorylase	Coenzyme transport and metabolism [H]	0.98
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	0.98
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.98
COG3313	Predicted Fe-S protein YdhL, DUF1289 family	General function prediction only [R]	0.98
COG3803	Uncharacterized conserved protein, DUF924 family	Function unknown [S]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.76 %
Unclassified	root	N/A	38.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.76 %
Unclassified	root	N/A	38.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.12 %
Unclassified	root	N/A	38.24 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	17.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.33 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	17.65 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.24 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.37 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	17.65 %
uncultured bacterium eBACmed86H08	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium eBACmed86H08	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.24 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	24.51 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	17.65 %
uncultured bacterium eBACmed86H08	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium eBACmed86H08	3.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.24 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	21.57 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	17.65 %
uncultured bacterium eBACmed86H08	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium eBACmed86H08	3.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.98 %
unclassified Pelagibacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.24 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	17.65 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	15.69 %
uncultured bacterium eBACmed86H08	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium eBACmed86H08	3.92 %
unclassified Pelagibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae	2.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.98 %
Pelagibacterales bacterium MED-G41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium MED-G41	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.24 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	17.65 %
uncultured bacterium eBACmed86H08	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium eBACmed86H08	3.92 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2.94 %
alpha proteobacterium HIMB5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB5	1.96 %
Pelagibacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	0.98 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.98 %
Pelagibacterales bacterium MED-G41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium MED-G41	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.24 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	17.65 %
uncultured bacterium eBACmed86H08	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium eBACmed86H08	3.92 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2.94 %
alpha proteobacterium HIMB5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB5	1.96 %
Pelagibacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	0.98 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.98 %
Pelagibacterales bacterium MED-G41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium MED-G41	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000222\|LPjun09P12500mDRAFT_1004283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3565	Open in IMG/M
3300000247\|LPaug09P26500mDRAFT_1002869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3796	Open in IMG/M
3300001117\|JGI11785J13272_1002363	All Organisms → cellular organisms → Bacteria	3054	Open in IMG/M
3300001346\|JGI20151J14362_10046137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB5	1945	Open in IMG/M
3300001353\|JGI20159J14440_10171282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB5	614	Open in IMG/M
3300001681\|Abe_10126864	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1286	Open in IMG/M
3300001947\|GOS2218_1037562	All Organisms → cellular organisms → Bacteria → Proteobacteria	1577	Open in IMG/M
3300001953\|GOS2231_1005389	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1817	Open in IMG/M
3300001972\|GOS2216_10115752	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300001972\|GOS2216_10147937	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1875	Open in IMG/M
3300001974\|GOS2246_10123968	All Organisms → cellular organisms → Bacteria → Proteobacteria	1934	Open in IMG/M
3300002033\|GOS24894_10106650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1387	Open in IMG/M
3300002040\|GOScombined01_100571173	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1570	Open in IMG/M
3300002040\|GOScombined01_101255108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1743	Open in IMG/M
3300002040\|GOScombined01_101863113	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1817	Open in IMG/M
3300002040\|GOScombined01_102766331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1711	Open in IMG/M
3300002040\|GOScombined01_102767116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1876	Open in IMG/M
3300002040\|GOScombined01_102836780	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300002040\|GOScombined01_104137574	Not Available	881	Open in IMG/M
3300002040\|GOScombined01_104985768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300002040\|GOScombined01_105182005	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	919	Open in IMG/M
3300002040\|GOScombined01_105467722	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300005239\|Ga0073579_1086440	Not Available	2067	Open in IMG/M
3300005239\|Ga0073579_1101944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	617	Open in IMG/M
3300005398\|Ga0066858_10043057	Not Available	1336	Open in IMG/M
3300005398\|Ga0066858_10249354	Not Available	508	Open in IMG/M
3300005400\|Ga0066867_10014761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3301	Open in IMG/M
3300005400\|Ga0066867_10318672	Not Available	556	Open in IMG/M
3300005401\|Ga0066857_10152631	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	823	Open in IMG/M
3300005404\|Ga0066856_10200114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	868	Open in IMG/M
3300005408\|Ga0066848_10018316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2002	Open in IMG/M
3300005408\|Ga0066848_10031701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium MED-G41	1485	Open in IMG/M
3300005422\|Ga0066829_10009063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3288	Open in IMG/M
3300005422\|Ga0066829_10100576	Not Available	869	Open in IMG/M
3300005423\|Ga0066828_10238704	Not Available	593	Open in IMG/M
3300005426\|Ga0066847_10246458	Not Available	541	Open in IMG/M
3300005427\|Ga0066851_10270867	Not Available	526	Open in IMG/M
3300005428\|Ga0066863_10307530	Not Available	549	Open in IMG/M
3300005429\|Ga0066846_10078180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1157	Open in IMG/M
3300005430\|Ga0066849_10137550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	964	Open in IMG/M
3300005430\|Ga0066849_10337532	Not Available	572	Open in IMG/M
3300005431\|Ga0066854_10091589	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1012	Open in IMG/M
3300005514\|Ga0066866_10262987	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium eBACmed86H08	594	Open in IMG/M
3300005521\|Ga0066862_10264017	Not Available	561	Open in IMG/M
3300005521\|Ga0066862_10303676	Not Available	516	Open in IMG/M
3300005593\|Ga0066837_10005425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	5442	Open in IMG/M
3300005593\|Ga0066837_10369353	Not Available	500	Open in IMG/M
3300005605\|Ga0066850_10122750	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	968	Open in IMG/M
3300005605\|Ga0066850_10186384	Not Available	754	Open in IMG/M
3300005605\|Ga0066850_10237207	Not Available	652	Open in IMG/M
3300005945\|Ga0066381_10082443	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	903	Open in IMG/M
3300005946\|Ga0066378_10047322	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1341	Open in IMG/M
3300005946\|Ga0066378_10051466	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1283	Open in IMG/M
3300005960\|Ga0066364_10259344	Not Available	607	Open in IMG/M
3300005971\|Ga0066370_10303090	Not Available	571	Open in IMG/M
3300005971\|Ga0066370_10385172	Not Available	507	Open in IMG/M
3300006076\|Ga0081592_1128169	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	948	Open in IMG/M
3300006166\|Ga0066836_10138336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1428	Open in IMG/M
3300006166\|Ga0066836_10272737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1011	Open in IMG/M
3300006166\|Ga0066836_10554804	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	695	Open in IMG/M
3300006166\|Ga0066836_10640710	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium eBACmed86H08	643	Open in IMG/M
3300006166\|Ga0066836_10710201	Not Available	608	Open in IMG/M
3300006166\|Ga0066836_10821924	Not Available	561	Open in IMG/M
3300006166\|Ga0066836_10966023	Not Available	513	Open in IMG/M
3300006308\|Ga0068470_1181483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	932	Open in IMG/M
3300006310\|Ga0068471_1115620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	4000	Open in IMG/M
3300006310\|Ga0068471_1180123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1348	Open in IMG/M
3300006310\|Ga0068471_1441945	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1530	Open in IMG/M
3300006313\|Ga0068472_10272115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	2482	Open in IMG/M
3300006313\|Ga0068472_10353946	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1703	Open in IMG/M
3300006313\|Ga0068472_10369063	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300006313\|Ga0068472_10481372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1488	Open in IMG/M
3300006313\|Ga0068472_10532649	Not Available	590	Open in IMG/M
3300006323\|Ga0068497_1070675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	919	Open in IMG/M
3300006323\|Ga0068497_1070676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	829	Open in IMG/M
3300006323\|Ga0068497_1179584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1588	Open in IMG/M
3300006326\|Ga0068477_1389759	Not Available	823	Open in IMG/M
3300006326\|Ga0068477_1444978	Not Available	930	Open in IMG/M
3300006326\|Ga0068477_1495306	Not Available	732	Open in IMG/M
3300006331\|Ga0068488_1182623	Not Available	2637	Open in IMG/M
3300006331\|Ga0068488_1208718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	854	Open in IMG/M
3300006331\|Ga0068488_1270933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1171	Open in IMG/M
3300006337\|Ga0068495_1064279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1310	Open in IMG/M
3300006339\|Ga0068481_1340289	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300006341\|Ga0068493_10287889	Not Available	2098	Open in IMG/M
3300006341\|Ga0068493_10451021	Not Available	667	Open in IMG/M
3300006341\|Ga0068493_10519519	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	831	Open in IMG/M
3300006346\|Ga0099696_1096093	Not Available	840	Open in IMG/M
3300006411\|Ga0099956_1231818	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium eBACmed86H08	668	Open in IMG/M
3300006412\|Ga0099955_1249985	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300006413\|Ga0099963_1195107	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium eBACmed86H08	1017	Open in IMG/M
3300006413\|Ga0099963_1320777	Not Available	739	Open in IMG/M
3300006902\|Ga0066372_10269939	Not Available	953	Open in IMG/M
3300006902\|Ga0066372_10329498	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	869	Open in IMG/M
3300006902\|Ga0066372_10573174	Not Available	670	Open in IMG/M
3300007160\|Ga0099959_1263206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	704	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	83.33%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	12.75%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.96%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	49.02%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	21.57%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	12.75%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	12.75%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.96%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.98%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.98%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	46.08%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	21.57%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	12.75%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	12.75%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.96%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.96%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.98%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	0.98%
Black Smokers Hydrothermal Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000222	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 500m	Environmental	Open in IMG/M
3300000247	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P26 500m	Environmental	Open in IMG/M
3300001117	Marine microbial communities from the Deep Pacific Ocean - MP2098	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001353	Pelagic Microbial community sample from North Sea - COGITO 998_met_09	Environmental	Open in IMG/M
3300001681	Black smokers hydrothermal plume microbial communities from Abe, Lau Basin, Pacific Ocean - IDBA	Environmental	Open in IMG/M
3300001947	Marine microbial communities from the Gulf of Maine, Canada - GS002	Environmental	Open in IMG/M
3300001953	Marine microbial communities from Key West, Florida, USA - GS015	Environmental	Open in IMG/M
3300001972	Marine microbial communities from the Sargasso Sea - GS000d	Environmental	Open in IMG/M
3300001974	Marine microbial communities from Upwelling, Fernandina Island, Equador - GS031	Environmental	Open in IMG/M
3300002033	Marine microbial communities from the Sargasso Sea - GS000a &b	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental	Open in IMG/M
3300005401	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV203	Environmental	Open in IMG/M
3300005404	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205	Environmental	Open in IMG/M
3300005408	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72	Environmental	Open in IMG/M
3300005422	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43	Environmental	Open in IMG/M
3300005423	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47	Environmental	Open in IMG/M
3300005426	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005428	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253	Environmental	Open in IMG/M
3300005429	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300005431	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75	Environmental	Open in IMG/M
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental	Open in IMG/M
3300005521	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255	Environmental	Open in IMG/M
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300005945	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_AAIW_ad_876m_LV_B	Environmental	Open in IMG/M
3300005946	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_DCM_ad_71m_LV_A	Environmental	Open in IMG/M
3300005960	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_A	Environmental	Open in IMG/M
3300005971	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_A	Environmental	Open in IMG/M
3300006076	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid A	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006323	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0500m	Environmental	Open in IMG/M
3300006326	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental	Open in IMG/M
3300006337	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0025m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006344	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0500m	Environmental	Open in IMG/M
3300006346	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0770m	Environmental	Open in IMG/M
3300006411	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0200m	Environmental	Open in IMG/M
3300006412	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0125m	Environmental	Open in IMG/M
3300006413	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0025m	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007160	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_1000m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPjun09P12500mDRAFT_10042832	3300000222	Marine	LNFQNKVFIINVGFPTTTINEFRNKHCGRGQYPPPPPFTTYGGELESTSV*
LPaug09P26500mDRAFT_10028691	3300000247	Marine	LNFQNKVFIINVGFPTTTINEFRNKHCGRGQYPPPPPFTTYGGELESTSV
JGI11785J13272_10023634	3300001117	Deep Ocean	MHKFYINSVGFPTTTINEFRNKHCGRGGSTPPPPFTTSGGELGSTSAKGYSFVRY
JGI20151J14362_100461372	3300001346	Pelagic Marine	LLTIINYIISVGLPTTTINEFRNNHYGRGGSTPPPPFITYGGEIGSTGD
JGI20159J14440_101712821	3300001353	Pelagic Marine	LLTIINYIISVGLPTTTINEFRNNHYGRGQYPPPPPFITYGGEIGSTGD*
Abe_101268642	3300001681	Black Smokers Hydrothermal Plume	LNIKNKFYIISVGFPTTTINEFRNKHCGRGGSTPPPPLTTYGGELESTSV*
GOS2218_10375622	3300001947	Marine	MLIASIIHYIIIVGLPTTTINEFRNNHYGRGQYPPPPPLIFYGGETGSTGD*
GOS2231_10053893	3300001953	Marine	LKLFYIINVGFPTMTINEFRNNHYGRGQYPPPPPFSTYGGELGSTGV*
GOS2216_101157525	3300001972	Marine	LIKVLYYWVVGFPTTTINEFRNKHYGRGQYPPPPPYSTYGGELGSTGV*
GOS2216_101479374	3300001972	Marine	LNLLKLFYIKDVGFPTTTINEFRNKHCGRGGSTPPPPISTYGGELGSTGV*
GOS2246_101239682	3300001974	Marine	NNLLNLLKLFYIKDVGFPTTTINEFRNKHYGRGGSTPPPPISTYGGELGSTGV*
GOS24894_101066502	3300002033	Marine	MQFVINNYIKSVGFPTMTINEFRNKHYRRGGSTPPPPFTTYGGELGSTDV
GOScombined01_1005711732	3300002040	Marine	YNNWFYINTVGFPTMTINEFRNNHYGRGGSTPPPPFSTYGGELGSTGD*
GOScombined01_1012551083	3300002040	Marine	LNLLILFYINNVGFPTTTINEFRNKHCGRGGSTPPPPISTYGGEPESTSAKSYL
GOScombined01_1018631132	3300002040	Marine	LNLLKLFYIKDVGFPTTTINEFRNKHYGRGGSTPPPPISTYGGELGSTGV*
GOScombined01_1027663313	3300002040	Marine	FYIINVGFPTTTINEFRNNHCGRGQYPPPPPLQQGGELESTGD*
GOScombined01_1027671161	3300002040	Marine	IKRFYIINVGFPTMTINEFRNNHYGRGGSTPPPPFSTYGGELGSTGV*
GOScombined01_1028367804	3300002040	Marine	LNLLILLFINNVGFPTTTINEFRNKHCGRGQYPPPPPITTYGGEPESTSV*
GOScombined01_1041375742	3300002040	Marine	YNNWFYINTVGFPTMTINEFRNNHYGRGQYPPPPPFSTYGGELGSTGD*
GOScombined01_1049857682	3300002040	Marine	LNLLILFYINNVGFPTTTINEFRNKHCGRGGSTPPPPITTYGGEPESTSV*
GOScombined01_1051820052	3300002040	Marine	LNLLKLLFIKDVGFPTTTINEFRNKHCGRGQYPPPPPISTYGGELGSTGV*
GOScombined01_1054677221	3300002040	Marine	LIKVLYYWVVGFPTTTINEFRNKHYGRGGSTPPPPYSTYGGELGSTGV*
Ga0073579_10864403	3300005239	Marine	MQFLIIGHIYTVGLPTTTINEFRNNHYGRGQYPPPPPFTTYGGEIGSTGD*
Ga0073579_11019442	3300005239	Marine	FYIISVGLPTITINEFRNKHCGRGQYPPPPPFIIYGGELESTSV*
Ga0066858_100430572	3300005398	Marine	MIKIIYYINNVGFPTMTIKEFRNKHCGRGGSTPPPPFTTYGGEPESTDV*
Ga0066858_102493541	3300005398	Marine	NKLNFKIKFYIISVGFPTTTINEFRNKHCGRGGSTPPPPITTQGGEPESTSV*
Ga0066867_100147614	3300005400	Marine	MHKFYINSVGFPTTTINEFRNKHCGRGGSTPPPPFTTSGGELGSTSV*
Ga0066867_103186722	3300005400	Marine	MLNINNVGFPTMAINEFRNNHHGRGGSTPPPPFSTYGGELGSTGAK
Ga0066857_101526312	3300005401	Marine	MFYINNVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGELESTSAKGY
Ga0066856_102001142	3300005404	Marine	NFSLSYIKHVGFPTTTINEFRNKHYGRGQYPPPPPILTYGGELGSTDV*
Ga0066848_100183161	3300005408	Marine	LNLLILLFINNVGFPTTTINEFRNKHCGRGQYPPPPPFSTYGGEPEST
Ga0066848_100317011	3300005408	Marine	MIKITLFINNVGFPTMTIKEFRNKHCGRGQYPPPPPFTTYGGEPEST
Ga0066829_100090631	3300005422	Marine	MHKFYINSVGFPTTTINEFRNKHCGRGQYPPPPPFTTSGGELGSTSV*
Ga0066829_101005761	3300005422	Marine	INNVGFPTTTINEFRNKHCGRGGSTPPPPFSTYGGEPESTGV*
Ga0066828_102387042	3300005423	Marine	KDVGFPTTTINEFRNKHCGRGQYPPPPPISTYGGELGSTDV*
Ga0066847_102464581	3300005426	Marine	FYINNVGFPTMTINEFRNNHYGRGQYPPPPPFSTYGGELGSTGV*
Ga0066851_102708672	3300005427	Marine	NNVGFPTTTINEFRNKHCGRGQYPPPPPFSTYGGEPESTSV*
Ga0066863_103075301	3300005428	Marine	NNVGFPTTTINEFRNKHCGRGQYPPPPPFSTYGGEPESTGV*
Ga0066846_100781801	3300005429	Marine	NIESIFYFYINNVGFPTTTINEFRNKHCGRGGSTPPPPFSTYGGEPESTSV*
Ga0066849_101375503	3300005430	Marine	ISSNYFYIKDVGFPTTTINEFRNKHCGRGQYPPPPPISTYGGELGSTGV*
Ga0066849_103375321	3300005430	Marine	VYYFYIKDVGFPTTTINEFRNKHYGRGQYPPPPPISTYGGELGSTGV*
Ga0066854_100915891	3300005431	Marine	MHKFYINSVGFPTTTINEFRNKHCGRGQYPPPPPFTTKGGELGSTGV*
Ga0066866_102629872	3300005514	Marine	YFYINNVGFPTTTINEFRNKHCGRGGSTPPPPISTYGGEPESTSV*
Ga0066862_102640172	3300005521	Marine	MLNINNVGFPTMAINEFRNNHHGRGGSTPPPPFSTYGGELGSTGV*
Ga0066862_103036761	3300005521	Marine	NIESINNFYINNVGFPTTTINEFRNKHCGRGGSTPPPPFSTYGGEPESTSV*
Ga0066837_100054252	3300005593	Marine	MFYINNVGFPTTTINEFRNKHYGRGQYPPPPPFTTYGGELESTSV*
Ga0066837_103693531	3300005593	Marine	SVGFPTTTINEFRNKHCGRGGSTPPPPYTTYGGELESTSV*
Ga0066850_101227502	3300005605	Marine	MFYINNVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGELESTSAK
Ga0066850_101863842	3300005605	Marine	FYINNVGFPTTTINEFRNKHCGRGQYPPPPPFSTYGGEPESTSV*
Ga0066850_102372072	3300005605	Marine	FYINNVGFPTTTINEFRNKHCGRGQYPPPPPNSTYGGEPESTSV*
Ga0066381_100824432	3300005945	Marine	LNFGLTFYIKDVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGELGSTDV*
Ga0066378_100473222	3300005946	Marine	LNFKLTFYIIAVGFPTTTINEFRNKHYGRGGSTPPPPFTTYGGELGSTDV*
Ga0066378_100514662	3300005946	Marine	LNPELRFYIIVVGFPTTTINEFRNKHYGRGGSTPPPPISTYGGELGSTDD*
Ga0066364_100524791	3300005960	Marine	MQFVKINYIKSVGFPTMTINEFRNKHYGRGQYPPPPPFTTYGGELGSTMSKG
Ga0066364_102593442	3300005960	Marine	LNLILLLLYYSVGFPTTTINEFRNKHCGRGGSTHHLHQKFTTYGGELGST
Ga0066370_103030901	3300005971	Marine	VFYINSVGFPTMTINEFRNKHYGRGQYPPPPPFTTYGGELGSTDV*
Ga0066370_103851722	3300005971	Marine	LNLINKFYIINVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGELGSTD
Ga0081592_11281691	3300006076	Diffuse Hydrothermal Fluids	MFYIIHVGFPTMTINEFRNKHCGRGQYPPPPPFTTYGGELESTS
Ga0066836_100980853	3300006166	Marine	MFYIIHVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGE
Ga0066836_101383363	3300006166	Marine	VGFPTTTINEFRNKHCGRGQYPPPPPISTYGGEPESTSV*
Ga0066836_102727372	3300006166	Marine	MCIHFFIEYRVYNYINHVGFPTTTINEFRNKHCGRGGSTPPPPISTYGGEPESTS
Ga0066836_105548042	3300006166	Marine	VYYFYIKDVGFPTTTINEFRNKHYGRGGSTPPPPISTYGG
Ga0066836_106407101	3300006166	Marine	FYINNVGFPTTTINEFRNKHCGRGGSTPPPPISTYGGELESTSV*
Ga0066836_107102011	3300006166	Marine	MFYINNVGFPTTTINEFRNKHCGRGQYPPPPPFTTYGGELESTVSKGYSF
Ga0066836_108219242	3300006166	Marine	MFYIINVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGEL
Ga0066836_109660232	3300006166	Marine	LNNYFKVLYYNVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGELEST
Ga0068470_11814833	3300006308	Marine	LLYNITVGFPTTTINEFRNKHCGRGQYPPPPPFTTCGGELESTSV*
Ga0068471_11156205	3300006310	Marine	LNHLNYFYIKDVGFPTTTINEFRNNHYGRGQYPPPPPISTYGGELGSTGV*
Ga0068471_11209061	3300006310	Marine	LTVSFSINKLNFKIKFYIIGVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGELESTSV*
Ga0068471_11801232	3300006310	Marine	LNLINKFYIIGVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGELESTSV*
Ga0068471_14419452	3300006310	Marine	LNLLILFYINNVGFPTTTINEFRNKHCGRGGSTPPPPFSTYGGEPESTSV*
Ga0068472_102721156	3300006313	Marine	YINKVGFPTITINEFRNKHYGRGQYPPPPPFTTYGGEPESTSV*
Ga0068472_103539462	3300006313	Marine	LNLYNKFYIIGVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGELESTSV*
Ga0068472_103690632	3300006313	Marine	MFYSIHVGFPTMTINEYRNKHCGRGGSTPPPPYTTYGGEIESTSV*
Ga0068472_104813722	3300006313	Marine	MLNISLKFYIISVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGEPESTSV*
Ga0068472_105326491	3300006313	Marine	MYKFYINSVGFPTMTINEFRNKHYGRGGSTHHLHISTYGGELGSTGV*
Ga0068497_10706752	3300006323	Marine	LNFELTFYIKAVGFPTTTINEFRNKHCGRGGSTPPPPYTTYGGELGSTSV*
Ga0068497_10706762	3300006323	Marine	LNIYKLFYINVVGFPTTTINEFRNKHCGRGGSTPPPPITTHGGELESTSV*
Ga0068497_11795841	3300006323	Marine	ILMYKFYINSVGFPTMTINEFRNKHCGRGGSTPPPPYTTYGGELESTSV*
Ga0068477_13897592	3300006326	Marine	LNLLNKVFIIRVGFPTTTINEFRNKHCGRGQYPPPPPFTTYGGELGSTSV*
Ga0068477_14449781	3300006326	Marine	LNFKIKFYIISVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGEPGSTDV*
Ga0068477_14953062	3300006326	Marine	LNIIYQVFINRVGFPTMTINEFRNKHCGRGQYPPPPPFTTYGGELESTSV*
Ga0068488_11826232	3300006331	Marine	LNINYQFYINSVGFPTTTINEFRNKHCGRGGSTPPPPFTAYGGELESTSV*
Ga0068488_12087183	3300006331	Marine	NFNIKFYINNVGFPTMTINEFRNKHYGRGQYPPPPPFTTYGGEPESTSV*
Ga0068488_12709333	3300006331	Marine	MFYIIHVGFPTTTINEFRNKHCGRGQYPPPPPITTCGGEPGSTGV*
Ga0068480_13284923	3300006335	Marine	DKNIDKKIESSNKDYIIPVGFPTTTINEFRNKHCGRGQYPPPPPFTTYGGELESTSV*
Ga0068495_10642792	3300006337	Marine	LSFFVGFPTMTINEFRNNLCGRGQYPPPPPISTYGGEPESTSV*
Ga0068482_11897426	3300006338	Marine	LNINYQVFINSVGFPTTTINQFRNKHCGRGQYPPPPPFTTYGGELESTSV*
Ga0068481_13402891	3300006339	Marine	LNLLILFYINNVGFPTTTINEFRNKHCGRGGSTPPPPISTYGGEPESTSV*
Ga0068493_102878894	3300006341	Marine	VVGFPTMTINVFRNKHCGRGQYPPPPPFSTYGGVPESTSV*
Ga0068493_104510211	3300006341	Marine	KLNFKLKFYIINVGFPTTTINEFRNKHRGRGGSTPPPPISTCGGELGSTDV*
Ga0068493_105195192	3300006341	Marine	MYKFYINSVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGELGSTSV*
Ga0099695_13046722	3300006344	Marine	MFYIIHVGFPTTTINEFRNKHCGRGGSTPPPPFTT*
Ga0099696_10960931	3300006346	Marine	ADTLIMIKKLLNYNNKFYIINVGFPTTTINEFRNKHCGRGGSTPPPPYTTYGGELESTSV
Ga0099956_12318181	3300006411	Marine	MFYINNVGFPTTTINEFRNKHCGRGGSTPPPPFTTYGGELESTSV*
Ga0099955_12499851	3300006412	Marine	MFYINNVGFPTTTINEFRNKHCGRGGSTPPPPLTTYGGELESTSV*
Ga0099963_11951071	3300006413	Marine	ITFYSYIKYVGYPTMTINEFRNNHFGRGGSTPPPPFSTYGGELGSTDD*
Ga0099963_13207771	3300006413	Marine	FYINNVGFPTTTINEFRNNHCGRGGSTPPPPFTTYGGELGSTGV*
Ga0066372_102699391	3300006902	Marine	FYIINVGFPTTTINEFRNKHCGRGGSTPPPPFTTLGGEPESTSV*
Ga0066372_103294982	3300006902	Marine	MLNINYQFYINSVGFPTMTINESHNKHCGRGGSTPPPPYTTYGGE
Ga0066372_105731741	3300006902	Marine	MFYIKNVGLPTMTINEFRNKHHGRGQYPPPPPFSTYGGELGSTGV*
Ga0099959_12632063	3300007160	Marine	DVGFPTTTINEFRNKHCGRGQYPPPPPISTYGGELGSTDV*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101850

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences