Metagenome / Metatranscriptome Family F101802

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101802
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	59 residues
Representative Sequence	TISMRIQWNGKDQGELRDRLAAYEAVGVQHILVAPVNREVDDWDEVIEGAGRLAA
Number of Associated Samples	93
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.90 %
% of genes near scaffold ends (potentially truncated)	93.14 %
% of genes from short scaffolds (< 2000 bps)	96.08 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.373 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.510 % of family members)
Environment Ontology (ENVO)	Unclassified (25.490 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.098 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.73% β-sheet: 12.05% Coil/Unstructured: 54.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
c.1.16.3: F420 dependent oxidoreductases	d1ezwa_	1ezw	0.72689
c.1.16.0: automated matches	d7bipa_	7bip	0.71924
c.1.16.1: Bacterial luciferase (alkanal monooxygenase)	d1luca_	1luc	0.71773
c.1.16.0: automated matches	d6lr1a_	6lr1	0.69118
c.1.21.1: Dihydropteroate synthetase	d1ad1a_	1ad1	0.68984

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00691	OmpA	5.88
PF13458	Peripla_BP_6	4.90
PF02666	PS_Dcarbxylase	3.92
PF00296	Bac_luciferase	2.94
PF01063	Aminotran_4	1.96
PF08327	AHSA1	1.96
PF00005	ABC_tran	1.96
PF01553	Acyltransferase	1.96
PF00083	Sugar_tr	1.96
PF06769	YoeB_toxin	0.98
PF04279	IspA	0.98
PF09859	Oxygenase-NA	0.98
PF08352	oligo_HPY	0.98
PF07690	MFS_1	0.98
PF00483	NTP_transferase	0.98
PF00743	FMO-like	0.98
PF13378	MR_MLE_C	0.98
PF01527	HTH_Tnp_1	0.98
PF01810	LysE	0.98
PF00248	Aldo_ket_red	0.98
PF02668	TauD	0.98
PF06808	DctM	0.98
PF00595	PDZ	0.98
PF04632	FUSC	0.98
PF00903	Glyoxalase	0.98
PF02775	TPP_enzyme_C	0.98
PF08028	Acyl-CoA_dh_2	0.98
PF02604	PhdYeFM_antitox	0.98
PF01541	GIY-YIG	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	3.92
COG0688	Phosphatidylserine decarboxylase	Lipid transport and metabolism [I]	3.92
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.94
COG1289	Uncharacterized membrane protein YccC	Function unknown [S]	0.98
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.98
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.98
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.98
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.98
COG2917	Intracellular septation protein A	Cell cycle control, cell division, chromosome partitioning [D]	0.98
COG4115	Toxin component of the Txe-Axe toxin-antitoxin module, Txe/YoeB family	Defense mechanisms [V]	0.98
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.37 %
Unclassified	root	N/A	18.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.37 %
Unclassified	root	N/A	18.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.37 %
Unclassified	root	N/A	18.63 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	70.59 %
Unclassified	root	N/A	18.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.69 %
Unclassified	root	N/A	18.63 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	22.55 %
Unclassified	root	N/A	18.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	11.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	22.55 %
Unclassified	root	N/A	18.63 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	4.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.92 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.96 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	22.55 %
Unclassified	root	N/A	18.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.92 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.96 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	1.96 %
Prosthecomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Prosthecomicrobium	0.98 %
Acidocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella	0.98 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	22.55 %
Unclassified	root	N/A	18.63 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.94 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	1.96 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.96 %
Prosthecomicrobium hirschii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Prosthecomicrobium → Prosthecomicrobium hirschii	0.98 %
Acidocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella	0.98 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	22.55 %
Unclassified	root	N/A	18.63 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	2.94 %
Acidisphaera sp. L21	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. L21	1.96 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.96 %
Prosthecomicrobium hirschii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Prosthecomicrobium → Prosthecomicrobium hirschii	0.98 %
Acidocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella	0.98 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY01EH2GH	Not Available	520	Open in IMG/M
3300004092\|Ga0062389_104137079	Not Available	545	Open in IMG/M
3300004631\|Ga0058899_12306051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1589	Open in IMG/M
3300004635\|Ga0062388_102370966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	555	Open in IMG/M
3300005171\|Ga0066677_10407304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300005434\|Ga0070709_10729802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300005435\|Ga0070714_101430324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	675	Open in IMG/M
3300005435\|Ga0070714_101760746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300005436\|Ga0070713_101816418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300005437\|Ga0070710_11516449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	504	Open in IMG/M
3300005439\|Ga0070711_100415702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1095	Open in IMG/M
3300005764\|Ga0066903_103229583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	881	Open in IMG/M
3300006172\|Ga0075018_10334594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	755	Open in IMG/M
3300006175\|Ga0070712_101735741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	546	Open in IMG/M
3300006237\|Ga0097621_102272179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300006638\|Ga0075522_10221467	Not Available	946	Open in IMG/M
3300009093\|Ga0105240_12654599	Not Available	517	Open in IMG/M
3300009137\|Ga0066709_103664161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300009177\|Ga0105248_12686725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella	568	Open in IMG/M
3300009522\|Ga0116218_1184480	All Organisms → cellular organisms → Bacteria → Proteobacteria	944	Open in IMG/M
3300009637\|Ga0116118_1281089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	506	Open in IMG/M
3300009787\|Ga0116226_10993246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	808	Open in IMG/M
3300010047\|Ga0126382_10556969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300010048\|Ga0126373_11867661	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300010049\|Ga0123356_12767116	Not Available	614	Open in IMG/M
3300010375\|Ga0105239_11578737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. L21	759	Open in IMG/M
3300010375\|Ga0105239_13089700	Not Available	542	Open in IMG/M
3300010376\|Ga0126381_102496410	Not Available	741	Open in IMG/M
3300011120\|Ga0150983_13125507	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300011271\|Ga0137393_10738265	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300012209\|Ga0137379_10424028	Not Available	1239	Open in IMG/M
3300012469\|Ga0150984_109831265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1650	Open in IMG/M
3300012469\|Ga0150984_111589452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1477	Open in IMG/M
3300012469\|Ga0150984_112114662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Prosthecomicrobium → Prosthecomicrobium hirschii	596	Open in IMG/M
3300012469\|Ga0150984_112127604	Not Available	576	Open in IMG/M
3300013296\|Ga0157374_10246380	All Organisms → cellular organisms → Bacteria → Proteobacteria	1758	Open in IMG/M
3300013306\|Ga0163162_10690573	Not Available	1143	Open in IMG/M
3300014654\|Ga0181525_10727094	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300015371\|Ga0132258_11584762	Not Available	1653	Open in IMG/M
3300015372\|Ga0132256_103224323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. L21	549	Open in IMG/M
3300019190\|Ga0184600_143662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	549	Open in IMG/M
3300020581\|Ga0210399_10485769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1027	Open in IMG/M
3300020583\|Ga0210401_10526691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1044	Open in IMG/M
3300021178\|Ga0210408_10668515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300021402\|Ga0210385_10369370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1074	Open in IMG/M
3300021433\|Ga0210391_10579832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	881	Open in IMG/M
3300021476\|Ga0187846_10013812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3832	Open in IMG/M
3300021479\|Ga0210410_10353960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1316	Open in IMG/M
3300021560\|Ga0126371_11696567	Not Available	756	Open in IMG/M
3300021560\|Ga0126371_13313814	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300022530\|Ga0242658_1023762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1131	Open in IMG/M
3300022531\|Ga0242660_1108822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300022533\|Ga0242662_10092818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	850	Open in IMG/M
3300022709\|Ga0222756_1058541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	592	Open in IMG/M
3300022722\|Ga0242657_1048773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300024249\|Ga0247676_1009404	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300025862\|Ga0209483_1189849	Not Available	827	Open in IMG/M
3300025898\|Ga0207692_10171925	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300025916\|Ga0207663_10637563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	840	Open in IMG/M
3300025930\|Ga0207701_11625568	Not Available	519	Open in IMG/M
3300026118\|Ga0207675_101894494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300026550\|Ga0209474_10037535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3571	Open in IMG/M
3300027512\|Ga0209179_1080355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	719	Open in IMG/M
3300027583\|Ga0209527_1065741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	816	Open in IMG/M
3300027603\|Ga0209331_1027746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1462	Open in IMG/M
3300027610\|Ga0209528_1035099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1109	Open in IMG/M
3300027698\|Ga0209446_1150163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	602	Open in IMG/M
3300027701\|Ga0209447_10173861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300027783\|Ga0209448_10059493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1285	Open in IMG/M
3300027795\|Ga0209139_10162138	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300027857\|Ga0209166_10141240	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300027908\|Ga0209006_10521472	All Organisms → cellular organisms → Bacteria → Proteobacteria	989	Open in IMG/M
3300027908\|Ga0209006_11342800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300028790\|Ga0307283_10177903	Not Available	599	Open in IMG/M
3300028879\|Ga0302229_10014882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4508	Open in IMG/M
3300030053\|Ga0302177_10629990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
3300030626\|Ga0210291_11743200	Not Available	562	Open in IMG/M
3300031057\|Ga0170834_110390127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300031234\|Ga0302325_12617747	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300031680\|Ga0318574_10773072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300031708\|Ga0310686_100124681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1017	Open in IMG/M
3300031724\|Ga0318500_10312963	Not Available	771	Open in IMG/M
3300031751\|Ga0318494_10321211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	894	Open in IMG/M
3300031754\|Ga0307475_10507861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	968	Open in IMG/M
3300031771\|Ga0318546_10625833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300031771\|Ga0318546_10950073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300031781\|Ga0318547_10742900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300031793\|Ga0318548_10469273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300031799\|Ga0318565_10633565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300031845\|Ga0318511_10183815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	925	Open in IMG/M
3300031897\|Ga0318520_10965447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300031910\|Ga0306923_11019531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300031947\|Ga0310909_10058234	All Organisms → cellular organisms → Bacteria	2994	Open in IMG/M
3300032059\|Ga0318533_10412540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	987	Open in IMG/M
3300032076\|Ga0306924_12634965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300032205\|Ga0307472_100628355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M
3300032515\|Ga0348332_12525905	Not Available	683	Open in IMG/M
3300032892\|Ga0335081_12160031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300032893\|Ga0335069_11193964	Not Available	833	Open in IMG/M
3300032895\|Ga0335074_10919932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	788	Open in IMG/M
3300033134\|Ga0335073_10972716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	883	Open in IMG/M
3300033134\|Ga0335073_11332124	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.31%
Host-Associated	Host-Associated	15.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.49%
Plants	Host-Associated → Plants	14.71%
Aquatic	Environmental → Aquatic	8.82%
Arthropoda	Host-Associated → Arthropoda	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.80%
Freshwater	Environmental → Aquatic → Freshwater	7.84%
Peat	Environmental → Terrestrial → Peat	2.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.94%
Sediment	Environmental → Aquatic → Sediment	0.98%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.98%
Cave	Environmental → Terrestrial → Cave	0.98%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.98%
Roots	Host-Associated → Plants → Roots	0.98%
Peat Moss	Host-Associated → Plants → Peat Moss	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.04%
Loam	Environmental → Terrestrial → Soil → Loam	17.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.98%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.86%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.94%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.94%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.98%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.98%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300019190	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030626	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_08756390	2170459010	Grass Soil	SMRTHWSGKDGGELRERVAAFAEIGVQHIMVAPLNREVDDWDEVIEGVGRLVARQV
Ga0062389_1041370791	3300004092	Bog Forest Soil	PEFTISMRTHWNGKDRGQLRDRIAAYAEAGVQHVMVHPLDRDVDDWDAVIEGTGRVAA*
Ga0058899_123060514	3300004631	Forest Soil	PEFTISMRTHWSGKDEGELRERVAAYEAIGVQHIMVAPANREIDDWDDVIEGAGRLAAHRL*
Ga0062388_1023709661	3300004635	Bog Forest Soil	MRTHWNGKDEGELRDRVAAYDAIGVQHLLVAPINREIDDWGQIIEGTGRLVTSL*
Ga0066677_104073041	3300005171	Soil	RLRRDRPEPEFTISIRTHWNGRDQSELRDRIAAFEAVGVQHIMVAPVNREVDDWDAVIEGAGRLVARR*
Ga0070709_107298022	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RDRPEPEFTISMRTHWNGKDEGELRERVAAYEEIGVQHILVAPVNREVDDWDEVIEGVGRLGAHRV*
Ga0070714_1014303241	3300005435	Agricultural Soil	TISMRIQWNGKDQGELRDRLAAYEAVGVQHILVAPVNREVDDWDEVIEGAGRLAA*
Ga0070714_1017607462	3300005435	Agricultural Soil	QWNGKDQGELRDRLAAYEAVGVQHVLVAPVNREVDDWDEVIEGAGRLVA*
Ga0070713_1018164182	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	SMRTHWNGKDEGELRERVAAYEEIGVQHILVAPVNREVDDWDEVIEGVGRLGAHRV*
Ga0070710_115164491	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LEEAAPIVRRLRAARPDNFTISMRIQWNGKDQGELRDRLAAYEAVGVQHILVAPVNREVDDWDEVIEGAGRLAA*
Ga0070711_1004157023	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	FTISMRTHWNGKDEGELRERVAAYEAIGVQHIMVAPVNREVDDWGEVIEGVGRLAAKV*
Ga0066903_1032295831	3300005764	Tropical Forest Soil	SMRTQWNGKDQGELRERLAAYAAVGVQHVLIAPENREVDDWDEVIEGAGRMVGR*
Ga0075018_103345942	3300006172	Watersheds	FTISMRTQWNGKDQGELRDRVAAYEAVGVQHLLIAPVNREVDDWDEVIEGAGRMVTG*
Ga0070712_1017357411	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EPEFTISMRTHWSGKDGGELRERVAAFAEIGVQHIMVAPLNREVDDWDEVIEGVGRLAARQV*
Ga0097621_1022721791	3300006237	Miscanthus Rhizosphere	SMRMQWNGKDEGELRDRLAAYAAVGVQHVLIAPANREVDDWDDVLEGAGRMVRR*
Ga0075522_102214672	3300006638	Arctic Peat Soil	ERPDDSFTVSMRVHWSGKDQGELSDRVAAYAAVGVGHIMIHPHDRNIDDWDSVIEGVGRLAGG*
Ga0105240_126545992	3300009093	Corn Rhizosphere	ETPEEAAPIVQRLRASRPDGFTISMRMQWNGKDEGELRDRLAAYAAVGVQHVLIAPANREVDDWDDVLEGAGRMVRR*
Ga0066709_1036641611	3300009137	Grasslands Soil	IRTHWNGRDQSELRDRIAAFEAVGVQHIMVAPVNREVDDWDAVIEGASRLVARR*
Ga0105248_126867251	3300009177	Switchgrass Rhizosphere	MRTQWNGKDQGELRDRVATYEAVGVQHLLIAPANREVDDWDEVIEGAGRLVTW*
Ga0116218_11844802	3300009522	Peatlands Soil	RMQWSGRDQGELRDRLAAYESAGVQHVLVAPENREVDDWDEVIEGARRLVGV*
Ga0116118_12810891	3300009637	Peatland	AGFTVSLRMQWNGRDQGELRDRLAAYQAAGVQHVLVAPENREVDDWDAVIEGAGRLVDG*
Ga0116226_109932462	3300009787	Host-Associated	DFTVSLRVEWNGRDQGELESKIAAFAAAGVDHILVAPQNRDVDDWDDVIEGVGRFVAG*
Ga0126382_105569692	3300010047	Tropical Forest Soil	RSERPEAEFTISMRTHWDGRDEAELRDRVAAFEAVGVQHIMIAPVDREVDNWDAVIEGAGRLVRKT*
Ga0126373_118676611	3300010048	Tropical Forest Soil	GKDQGELKDRLAAYEAAGVQHILVAPVNREVDDWDAVIEGAGRFVTATN*
Ga0123356_127671161	3300010049	Termite Gut	ISVRTHWNGKDGGELRDRVAAYAAAGVQHVLVAPVNREVDDWDEVIEGAGKLVER*
Ga0105239_115787371	3300010375	Corn Rhizosphere	HWNGKDLGELRDRVAAYAGVGVQHLLIAPVNREVDDWDEVIEGAGKLVG*
Ga0105239_130897002	3300010375	Corn Rhizosphere	SMRVQWNGKDQGELRDRLAGYEAVGVQHVLVAPVNREVDDWDEVIEGSGRLIA*
Ga0126381_1024964102	3300010376	Tropical Forest Soil	MRTHWNGKDQGELRDRVAAYEAVGVQHLLIAPVNREVDDWDEVIEGAGRLVGRTS*
Ga0150983_131255073	3300011120	Forest Soil	WSGKDQGELRDRVAAYADVGVGHIMVHPHDRNVDDWDSVIDGVGRLAGG*
Ga0137393_107382651	3300011271	Vadose Zone Soil	SMRTHWSGRDGGELRERVAAFAEIGVQHIMVAPLNREVDDWDEVIEGVGRLVARQV*
Ga0137379_104240283	3300012209	Vadose Zone Soil	EPEFTISMRTHWSGKDEGELRERVAAFAEIGVQHIMVAPVNREVDDWDEVIEGVGRLAARQV*
Ga0150984_1098312654	3300012469	Avena Fatua Rhizosphere	PEFTISMRTHWNGKDQGELRDRIAAYGEAGVQHVMVHPLNRDVDDWDEVTEGVGRVAAAL
Ga0150984_1115894522	3300012469	Avena Fatua Rhizosphere	MRTHWNGRDQGELRDRVARYAAVGVQHIMVAPENREVDDWDSVIEGTGRLVGG*
Ga0150984_1121146622	3300012469	Avena Fatua Rhizosphere	GFTISMRVSWNGKDVGALRERIAAYAAVGVQHIMVAPADREVDDWDEVIEGAGRLV*
Ga0150984_1121276042	3300012469	Avena Fatua Rhizosphere	GADFTISMRTQWNGKDQGELRDRLAAYEAVGVQHVLIAPTNREVDDWDEVIEGAGKMVTH
Ga0157374_102463802	3300013296	Miscanthus Rhizosphere	SRPDGFTISMRMQWNGKDEGELRDRLAAYAAVGVQHVLIAPANREVDDWDDVLEGAGRMVRR*
Ga0163162_106905731	3300013306	Switchgrass Rhizosphere	RPDNFTISMRIQWDGKDPGELRARLAAYGAVGVQHVLVAPVNREVDDWDEVIEGAGRMVAR*
Ga0181525_107270941	3300014654	Bog	FTVSMRLHWSGKDQGELRDRVAAYAAVGVGHIMVHPHDRNVDDWDSVIDGVGKLAHAR*
Ga0132258_115847622	3300015371	Arabidopsis Rhizosphere	PTGFTISMRTQWNGKDQGELRGRVAAYEAGGVQHLLIAPTNREVDDWDEVIEGAGRLVTR
Ga0132256_1032243231	3300015372	Arabidopsis Rhizosphere	FTISMRSHWNGKDLGELRYRVAAYAGVGVQHLLIAPVNREVDDWDEVIEGAGKLVG*
Ga0184600_1436621	3300019190	Soil	APIVERLRRDRPEPEFTISMRTHWHGKDEGELRARLAAYAEIGVQHVMVAPVNREIDDWDAVIDGTGRVAAG
Ga0210399_104857691	3300020581	Soil	TISMRTHWNGKDEGKLRERVAAYEAIGVQHIMVAPVNREIDDWDEVIEGAGRLASHRI
Ga0210401_105266911	3300020583	Soil	RPEPEFTISMRTHWNGKDEGELRCRVAAYEAIGVQHIMVAPANREIDDWDEVIEGAGRLVAHRV
Ga0210408_106685152	3300021178	Soil	TISMRTHWSGKDEGELRERVAAYEEIGVQHILVAPVNREVDDWDEVIEGVGRLGAHRV
Ga0210385_103693701	3300021402	Soil	MRTHWNGKDPGELRERIAAYAEVGVQHVMVHPLDRDVDDWDAVIEGTGHAAV
Ga0210391_105798321	3300021433	Soil	MRTHWNGKDEGELRERVAAYEEIGVQHILVAPVNREVDDWDEVIEGVGRLGAHRV
Ga0187846_100138121	3300021476	Biofilm	SMRTHWNGKDLGELRERIAAYAEIGVQHILVAPVNREVDDWDEVIEGVGRLAAA
Ga0210410_103539603	3300021479	Soil	RSDRPEPEFRISMRTHWNGKDEGELRERVAAYEEIGVQHILVAPVNREVDDWDEVIEGVGRLGAHRV
Ga0126371_116965672	3300021560	Tropical Forest Soil	LRRERPDGFTISMRMQWNGKDQGELRDRLAGYEAVGVQHVLIAPSNREVDDWDEVLEGAGRMVKG
Ga0126371_133138141	3300021560	Tropical Forest Soil	RRLRSERPGPDFTISMRMHWNGKDQGELKDRLAAYEAAGVQHILVAPVNREVDDWDAVIEGAGRFVTATN
Ga0242658_10237621	3300022530	Soil	VKRLRRDRPEPEFTISMRTHWNGKNEGELRCRVAAYEAIGVQHIMVAPANREIDDWDEVIEGAGRLVAHRV
Ga0242660_11088221	3300022531	Soil	PEFTISMRTHWNGKDGGELRDRVAAYEAIGIQHIMVAPANREIDGWDEVIEGAGRLVAHR
Ga0242662_100928182	3300022533	Soil	RTHWNGKDQGELRERVAAFEAIGVQHIMVAPVNREIDDWDEVIEGAGRLASHRI
Ga0222756_10585411	3300022709	Soil	AFTISMRTHWNGKDPGELRERIAAYAEVGVQHVMVHPLDRDVDDWDAVIEGTGHAAV
Ga0242657_10487733	3300022722	Soil	DFTISMRTQWNGKDQGELRDRIAAYEAVGVQHLLIAPVNREVDDWDEVIEGVGRLGAHRV
Ga0247676_10094041	3300024249	Soil	NGKDQGELKDRLAAYEAVGVQHILVAPVNREVDDWDAVIEGAGKFITAIN
Ga0209483_11898491	3300025862	Arctic Peat Soil	ERPDDSFTVSMRVHWSGKDQGELSDRVAAYAAVGVGHIMIHPHDRNIDDWDSVIEGVGRLAGG
Ga0207692_101719253	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	PDGFTMSMRIQWNGKDQGELRDRLAAYAAVGVQHVLVAPVNREVDDWDEVIEGAGRMVTQ
Ga0207663_106375631	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ETPAEAAPIVQRLRATRPDNFTISMRTQWNGKDQGELRDRLAAYEAVGVQHILVAPVNREVDDWDEVIEGAGRLVA
Ga0207701_116255682	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	NGKDQGELRDRVAAYAAVGVQHLLIAPANREVDDWDEVIEGAGRLVSA
Ga0207675_1018944942	3300026118	Switchgrass Rhizosphere	HGSRETPEEAAPIVQRLRASRPDGFTISMRMQWNGKDEGELRDRLAAYAAVGVQHVLIAPANREVDDWDDVLEGAGRMVRR
Ga0209474_100375355	3300026550	Soil	RTHWNGKDEGELRARVAAYEAIGVQHIMVAPVNREVDDWDLVIEGTGRLAAHRR
Ga0209179_10803551	3300027512	Vadose Zone Soil	HWSGKDEGELRERVAAFAEIGVQHIMVAPVNREVDDWDEVIEGVGRLAARQV
Ga0209527_10657411	3300027583	Forest Soil	PEFTISMRTHWSGKDEGELRERVAAYEEIGVQHILVAPVNREVDDWDEVIEGVGRLGAHR
Ga0209331_10277461	3300027603	Forest Soil	ISIRTHWNGKDEGELRERVAAYEEIGVQHILVAPVNREVDDWDEVIEGVGRLGAHRV
Ga0209528_10350992	3300027610	Forest Soil	MRTHWNGKDEGELRERVAAYEEIGVQHILVAPVNREVDDWEEVIEGVGRLGAHRV
Ga0209446_11501631	3300027698	Bog Forest Soil	MRLHWSGKDQGELRDRVAAYAAVGVGHIMVHPHDRNVDDWDSVIEGVGRLAGD
Ga0209447_101738612	3300027701	Bog Forest Soil	MRTHWNGKDEGELRDRVAAYDAIGVQHLLVAPINREIDDWGQIIEGTGRLVTSL
Ga0209448_100594931	3300027783	Bog Forest Soil	PGFTISMRTHWNGKDRGELRDRIAAYAAAGVQHVMVHPLNRDVDDWDAVIEGTGRVAA
Ga0209139_101621381	3300027795	Bog Forest Soil	ISMRTHWNGKDRGELRDRIAAYAGAGVQHVMVHPLDRDVDDWDAVIEGTGHVAA
Ga0209166_101412401	3300027857	Surface Soil	TISMRIQWNGKDQAELRDRLAAYEAVGVEHVLVAPNNREVDDWDEVIEGAGRMVSA
Ga0209006_105214723	3300027908	Forest Soil	MRTQWNGKELGELRDRLAAYEAAGVQHVLVAPENREVDDWDTVIEGAGRLV
Ga0209006_113428001	3300027908	Forest Soil	PGNDFTVSMRIQWNGKDQGELRDRLATYEAVGVQHVLVAPNNREVDDWDEVIEGAGRMVS
Ga0307283_101779032	3300028790	Soil	GGFTISMRTQWNGKDQGELRDRLQAYQAVGVQHVLIAPENREVDDWDQVIEGAGRMVAG
Ga0302229_100148826	3300028879	Palsa	VSMRVHWSGKDQGELRDRVAAYAAIGVGHIMIHPHDRNVDDWDSVIEGVGRLAGG
Ga0302177_106299901	3300030053	Palsa	DRGELEARIAAYEAVGVQHVLIAPENREVDDWDAVIEGVGRFVAGGNGAA
Ga0210291_117432002	3300030626	Soil	ERPDDGITVSMRVHWSGKDQGELRDRVAAYAAIGVGHIMIHPHDRNVDDWDSVIEGVGRLAAG
Ga0170834_1103901271	3300031057	Forest Soil	MRTHWNGKDQGELRERAAAYEAIGVQHIMVAPVNREIDDWDEVIEGAGRLVAHGM
Ga0302325_126177471	3300031234	Palsa	FTVSMRLHWSGKDQGELRDRVAAYAAVGVGHIMVHPHDRNVDDWDGVIEGVGRLASE
Ga0318574_107730721	3300031680	Soil	ISMRTHWNGKDERELRDRVAAFAAAGVQHIMVAPVNREVDDWDEVIEGAGRLAARI
Ga0310686_1001246812	3300031708	Soil	EAAPIVQRLRADRPDAGFTVSMRMQWNGRDQGELRDRVAAYEAVGVQHLLVAPENREVDDWDAVIEGAGRLVSG
Ga0318500_103129631	3300031724	Soil	IRTHWNGKDLGELRDRIAAFEGVGVQHIMVAPVNREVDDWDEVIEGAGRLAATRV
Ga0318494_103212112	3300031751	Soil	RLRRERPEPQLTISMRTHWNGKDAGELRERLAAYEAVGVQHVMVHPVNRDVDDWDDVIEGVGRVSSRV
Ga0307475_105078611	3300031754	Hardwood Forest Soil	ISMRTHWNGKDEGELRERVAAYEEIGVQHILVAPVNREVDDWNEVIKGVGRLGAQRV
Ga0318546_106258332	3300031771	Soil	EPEFTISMRTHWNGQDEGELRDRVAAFEEVGVQHIMVAPVNREVDDWDEVIEGVGRVAAARV
Ga0318546_109500731	3300031771	Soil	RETPEEAAPIVQRLRAARPEGFTISMRMQWNGKDQGELRDRLAAYRSVGVQHVLIAPENREVDDWDEVIEGAGRMVAA
Ga0318547_107429002	3300031781	Soil	HWNGKDEGELRDRVAAFEEVGVQHIMVAPVNREVDDWDEVIEGVGRVAAARV
Ga0318548_104692732	3300031793	Soil	WNGKDEGELRDRVAAFEEVGVQHIMVAPVNREVDDWDEVIEGVGRVAAARV
Ga0318565_106335652	3300031799	Soil	AAPIVARLRRERPEPQLTISMRTHWNGKDAGELRERLAAYEAVGVQHVMVHPVNRDVDDWDDVIEGVGRVSSRV
Ga0318511_101838151	3300031845	Soil	APIVARLRRERPEPQLTISMRTHWNGKDAGELRERLAAYEAVGVQHVMVHPVNRDVDDWDDVIEGVGRVSSRV
Ga0318520_109654471	3300031897	Soil	HWDGKDQGELRERLAAYQEAGVQHLLIAPMNREVDDWDEVIEGAGRMVAA
Ga0306923_110195312	3300031910	Soil	RSDRPEPEFTISMRTHWNGKDERELRDRVAAFAAAGVQHIMVAPVNREVDDWDEVIEGAGRLAARI
Ga0310909_100582343	3300031947	Soil	RPEPEFTISMRTHWDGRDQGELRARIAAYGEAGMQHVMIHPVDRNVDDWDAVIEGTGRVA
Ga0318533_104125401	3300032059	Soil	SGTAKTKANWNGKDEGELRERVAAYVAIGVQHIMVAPVNREIDDWDEVIEGAGRLASHRI
Ga0306924_126349652	3300032076	Soil	DRPEPEFTISMRTHWNGKDERELRDRVAAFAAAGVQHIMVAPVNREVDNWDEVIEGAGRLAARI
Ga0307472_1006283553	3300032205	Hardwood Forest Soil	DRPESEFTISMRTHWNGKDEGELRERVAAYEEIGVQHILVAPVNREVDDWDEVIEGVGRLGAHRV
Ga0348332_125259051	3300032515	Plant Litter	SMRTHWNGKDEGELRARLAAYAEIGVQHVMVAPVNREIDDWDAVIDGTGRVAAG
Ga0335081_121600311	3300032892	Soil	WNGKDRGELTERIAGFAAVGVQHVMVHPLDRNIDDWHEVIDGVGAVAGR
Ga0335069_111939641	3300032893	Soil	ISMRTHWNGKDQGELRARVAAFEAAGVQHLLIAPVNREVDDWDEVIEGAGRMVVR
Ga0335074_109199321	3300032895	Soil	TISIRSHWNGKDVGELRERVAAYEAVGVQHVLIGPVNREVDDWDEVIEGAGKLVGR
Ga0335073_109727162	3300033134	Soil	QWNGRDPGELRDRLAGYAACGVEHVMVAPEDREVDDWDSVFEGAGRLVGG
Ga0335073_113321242	3300033134	Soil	RADFTISMRIQWNGKDQGELRDRLAAYEAVGVQHILVAPSNREVDDWDEVIEGAGRMVTS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101802

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences