NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F101791

Metagenome / Metatranscriptome Family F101791

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F101791
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 86 residues
Representative Sequence MGRYLLSGLLLLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVVPTTPQHAQ
Number of Associated Samples 87
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 61.76 %
% of genes near scaffold ends (potentially truncated) 40.20 %
% of genes from short scaffolds (< 2000 bps) 90.20 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (89.216 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(20.588 % of family members)
Environment Ontology (ENVO) Unclassified
(43.137 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.784 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.
1JGI1027J12803_1016637801
2Ga0062595_1005474611
3Ga0062594_1015874882
4Ga0070682_1008221151
5Ga0070660_1006073071
6Ga0070691_100326325
7Ga0070668_1005889212
8Ga0070669_1003776961
9Ga0070675_1020444971
10Ga0070674_1014087682
11Ga0070674_1015032251
12Ga0070667_1006671752
13Ga0070710_107376911
14Ga0070711_1004972772
15Ga0070705_1015561501
16Ga0070694_1017960231
17Ga0070663_1003921782
18Ga0070678_1011295321
19Ga0068867_1001466833
20Ga0070679_1016934952
21Ga0070695_1005477911
22Ga0070702_1005970571
23Ga0068866_108495001
24Ga0068861_1008379931
25Ga0068861_1009099573
26Ga0075018_105394002
27Ga0068865_1010849982
28Ga0105250_102368672
29Ga0111539_109335653
30Ga0105247_103653962
31Ga0111538_105863183
32Ga0075423_105168803
33Ga0105249_104241452
34Ga0105249_128128281
35Ga0105249_134504412
36Ga0126319_12491071
37Ga0127503_103046001
38Ga0105239_116205001
39Ga0105239_125019861
40Ga0134121_103524771
41Ga0134121_119301511
42Ga0157321_10266642
43Ga0164300_100113942
44Ga0164300_112003012
45Ga0164298_105638801
46Ga0164303_101654631
47Ga0164303_103487672
48Ga0164299_104182492
49Ga0164299_105336891
50Ga0164301_103810432
51Ga0164302_100094103
52Ga0164302_110046622
53Ga0164302_111788111
54Ga0164309_100117075
55Ga0164308_106099891
56Ga0164308_107429121
57Ga0164304_113296812
58Ga0164307_105190081
59Ga0164307_115049441
60Ga0164306_108565301
61Ga0164305_114698861
62Ga0157378_118955271
63Ga0157378_121862471
64Ga0163162_116773611
65Ga0157372_104215731
66Ga0157376_120599661
67Ga0173483_106946482
68Ga0132258_108807612
69Ga0132256_1001579994
70Ga0132255_1003826153
71Ga0184625_104823771
72Ga0206353_109395021
73Ga0242658_12211851
74Ga0242654_100847631
75Ga0207692_105850391
76Ga0207647_103639532
77Ga0207671_108994352
78Ga0207663_114331432
79Ga0207662_100514304
80Ga0207657_105428102
81Ga0207681_103630953
82Ga0207701_109389071
83Ga0207690_111028492
84Ga0207706_110522001
85Ga0207669_115244471
86Ga0207712_106807762
87Ga0207640_107252882
88Ga0207658_109301611
89Ga0207639_113065871
90Ga0207648_101086154
91Ga0207675_10003762310
92Ga0207683_110077491
93Ga0268265_107406611
94Ga0170834_1105928932
95Ga0307498_100533501
96Ga0170824_1119053471
97Ga0310893_101438542
98Ga0307470_111424971
99Ga0307471_1012007022
100Ga0307471_1023297061
101Ga0307472_1025321501
102Ga0247830_103731912
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 21.52%    β-sheet: 0.00%    Coil/Unstructured: 78.48%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MGRYLLSGLLLLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVVPTTPQHAQSequenceα-helicesβ-strandsCoilSS Conf. scoreSignal Peptide
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
10.8%89.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Groundwater Sediment
Watersheds
Soil
Terrestrial Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Forest Soil
Hardwood Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
20.6%3.9%8.8%2.9%3.9%3.9%2.9%5.9%2.9%2.9%4.9%3.9%4.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10166378013300000955SoilLLAFSALNAFAAENPEKKTAVGLGEVCDQRIGPLCKSGLECNSAEPGKAGVCANATVPEQVVPTTPPRAQ*
Ga0062595_10054746113300004479SoilMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0062594_10158748823300005093SoilLAFGALNALAAENPEKAAVGLGEVCDKKIGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTPPQRAQ*
Ga0070682_10082211513300005337Corn RhizosphereMGRYLMSGLFLAFSALNPFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0070660_10060730713300005339Corn RhizosphereALNPFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0070691_1003263253300005341Corn, Switchgrass And Miscanthus RhizosphereMNQPQSLSPGVFHVGENRMGRYLMSGLFLAFSALNPFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0070668_10058892123300005347Switchgrass RhizosphereMGRYLLSGLLLLAFSAFNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0070669_10037769613300005353Switchgrass RhizosphereMTRAFDLGENRMGRYLDLLLGLLFLAFGALNALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0070675_10204449713300005354Miscanthus RhizosphereQPQSLMTRAFDLGENRMGRYLDLLLGLLFLAFGALNALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0070674_10140876823300005356Miscanthus RhizosphereMGRYLLSGLLLLAFGALNALAAENPEKAAVGLGEVCDKKIGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTPPQRAQ*
Ga0070674_10150322513300005356Miscanthus RhizosphereTMNQPQSLSPGVFHVGENRMGRYLMSGLFLAFSALNPFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0070667_10066717523300005367Switchgrass RhizosphereAFDLGENRMGRYLDLLLGLLFLAFGALNALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0070710_1073769113300005437Corn, Switchgrass And Miscanthus RhizospherePTEADARNNESIAIVEPRVFHLGENRMVRYLLSGLLLLAFSALNALAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQFVPTTPPHAQ*
Ga0070711_10049727723300005439Corn, Switchgrass And Miscanthus RhizosphereIKRAPTEADAGTINQPQSLMTRAFDLGENRMGRYLLSGLLLLAFSALNALAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0070705_10155615013300005440Corn, Switchgrass And Miscanthus RhizosphereAGTINQPQSLMTRAFDLGENRMGRYLDLLLGLLFLAFGALNALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0070694_10179602313300005444Corn, Switchgrass And Miscanthus RhizosphereMNQPQSLSPGVFHVGENRMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0070663_10039217823300005455Corn RhizosphereMNQPQSLSPGVFHVGENRMGRYLMSGLFLAFSALNPFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHTQ*
Ga0070678_10112953213300005456Miscanthus RhizosphereMTRAFDLGENRMGRYLDLLLGLLFLAFGALNALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTPPQRAQ*
Ga0068867_10014668333300005459Miscanthus RhizosphereMGRYLMSGLFLAFSALNPFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHTQ*
Ga0070679_10169349523300005530Corn RhizosphereSALNPFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0070695_10054779113300005545Corn, Switchgrass And Miscanthus RhizosphereMGRYLDLLLGLLFLAFGALNALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0070702_10059705713300005615Corn, Switchgrass And Miscanthus RhizosphereMGRYLMSGLFLAFSALNPFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATAPEQVAPTTPQHAQ*
Ga0068866_1084950013300005718Miscanthus RhizosphereTEADAGTINQPQSLMTRAFDLGENRMGRYLDLLLGLLFLAFGALNALAAENPEKAEVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0068861_10083799313300005719Switchgrass RhizosphereGRYLLSGLLLLAFGALNTFAAENPEKPAVGLGEVCDKRNGPLCKSGLDCNSSEPGKAGVCANATVPEQVAPTTPQRPQ*
Ga0068861_10090995733300005719Switchgrass RhizosphereMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVP
Ga0075018_1053940023300006172WatershedsLLGLRKAPVVMGQPDWNNRSSRSLSDQGFRLGDNRMVRSLLSALLFLAFSALNAFAAENPEKTAVGLGEVCDKRIGSLCKSGLECNSAEPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0068865_10108499823300006881Miscanthus RhizosphereLLLGLLFLAFGALNALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0105250_1023686723300009092Switchgrass RhizosphereMNQPQSLSPGVFHVGENRMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAP
Ga0111539_1093356533300009094Populus RhizosphereMGRYLLSGLSLLAFSALNAFAAENPEKKTAVGLGEVCDQRIGPLCKSGLECNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0105247_1036539623300009101Switchgrass RhizosphereMNQPQSLSPGVFHVGENRMGRYLMSGLFLAFSALNPFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATAPEQVAPTTPQHAQ*
Ga0111538_1058631833300009156Populus RhizosphereMSRYLLSGLLVLAFSSLNTFAFENPEKTAVGLGEVCDKKLGPLCKSDLECNSAEAGKAGVCANATVREQVSPTTPQ
Ga0075423_1051688033300009162Populus RhizosphereMGRYLLSGLSLLAFSALNAFAAENPEKKTAVGLGEVCDQRIGPLCKSGLECNSAEPGKAGVCANATVPEQVVPTTPPRAQ*
Ga0105249_1042414523300009553Switchgrass RhizosphereMGRYLLSGLLLLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANAKVPEQVGPTTPQHAQ*
Ga0105249_1281282813300009553Switchgrass RhizosphereVGRYLLFGFLLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVREQVVPTTPQRPQ*
Ga0105249_1345044123300009553Switchgrass RhizosphereMGRYLLSGLLLLAFGALNAFAAENPEKPAVGLGEVCDKRNGPLCKSGLDCNSSEPGKAGVCANATVPEQVVPTTPQRAQKNSN
Ga0126319_124910713300010147SoilLGENRMGRYLLSGLLVLAFGALNALAAENPEKAAVGLGEVCDKKIGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTPPQRAQ*
Ga0127503_1030460013300010154SoilLGDNRMVRSLLSTLLFLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVVPTTPQHAQ*
Ga0105239_1162050013300010375Corn RhizosphereMTRAFDLGENRMGRYLDLLLGLLFLAFGALSALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0105239_1250198613300010375Corn RhizosphereMGRYLLSGLLLLAFGALNALAAENPEKAAVGLGEVCDKKIGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0134121_1035247713300010401Terrestrial SoilMNQPQSLSPGVFHVGENRMGPYLMSGLFLAFSALNPFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0134121_1193015113300010401Terrestrial SoilGENRMGRYLDLLLGLLFLAFGALNALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0157321_102666423300012487Arabidopsis RhizosphereMSRYLLSGLLVLAFSSLNAFAFENPEKTAVGLGEVCDKKLGPLCKSDLECNSAEAGKAGVCANATVREQVSPTTPQRAQ*
Ga0164300_1001139423300012951SoilMNQPQSLSPGVFHVGENRMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATAPEQVAPTTPQHAQ*
Ga0164300_1120030123300012951SoilMVRSLLSALLFLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0164298_1056388013300012955SoilMGRYLLSGLLLLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVVPTTPQHAQ*
Ga0164303_1016546313300012957SoilMNQPQSLSPGVFHVGENRMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHTQ*
Ga0164303_1034876723300012957SoilMVRYVLSALLILAFGALNTFAAENAEKTAVGLGEVCDKRIGPLCKSGLKCNSAEPDKAGVCANATVPEQVVPTTPQHAE*
Ga0164299_1041824923300012958SoilMVRSLLSALLFLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVVPTTPQHAQ*
Ga0164299_1053368913300012958SoilIKRAPTEADAGTINQPQSLMTRAFDLGENRMGRYLHLLLGLLFLAFGALNALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0164301_1038104323300012960SoilMVRYVLSALLILAFGALNTFAAENAEKTAVGLGEVCDKRIGPLCKSGLECNSAEPDKAGVCANATVPEQVVPTTPQHAE*
Ga0164302_1000941033300012961SoilMNQPQSLSPGVFHVGENRMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTAPQHAQ*
Ga0164302_1100466223300012961SoilMSRYLLSGLLLLAFGALNAFAAENPEKPAVGLGEVCDKRNGPLCKSGLDCNSSEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0164302_1117881113300012961SoilMVRSLLSTLLFLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVVPTTPQHAQ*
Ga0164309_1001170753300012984SoilMGPYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0164308_1060998913300012985SoilMNQPQSLSPGVFHVGENRMGPYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0164308_1074291213300012985SoilMTRAFDLGENRMGRYLDLLLGLLFLAFGALHALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0164304_1132968123300012986SoilMGRYLLSGLLLLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPDKAGVCANATVSEQVAPTTPQHAQ*
Ga0164307_1051900813300012987SoilMTRAFDLGENRMGRYLHLLLGLLFLAFGALNALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTT
Ga0164307_1150494413300012987SoilMGRCLLSGLLLLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0164306_1085653013300012988SoilLLSALLFLAFSALNVFAAENQERTAVGLGGVGDRRIGPLCKSGLECNSAEPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0164305_1146988613300012989SoilMGRCLLSGLLLLAFSTLNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVVPTTPKHAQ*
Ga0157378_1189552713300013297Miscanthus RhizosphereMGRSLDLLLGLLFLAFGALNALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ*
Ga0157378_1218624713300013297Miscanthus RhizosphereMGRYLLSGLLLLAFGALNALAAENPEKAAVGLGEVCDKKIGPLCKSGLDCNSSEPGKAGVCANATVPEQVAPTTPQRPQ*
Ga0163162_1167736113300013306Switchgrass RhizospherePVCSSATEADEVRGADLKADAGTTNQPQSLSPRVVHFGENRMGRYLLSGLLLLAFSALNAFAAENPEKTAVGLGEVCDQRIGPLCKTGLECNSTEPGKAGVCANATVPEKVVPTTPQRAQ
Ga0157372_1042157313300013307Corn RhizosphereTMNQPQSLSPGVFHVGENRMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATAPEQVAPTTPQHAQ*
Ga0157376_1205996613300014969Miscanthus RhizosphereSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ*
Ga0173483_1069464823300015077SoilMGRYLLSGLSLLAFSALNAFAAENPEKTAVGLGEVCDQRIGPLCKSGLECNSAEPGKAGVCANATVPEQVVPTTP
Ga0132258_1088076123300015371Arabidopsis RhizosphereVPLAFAARPHEKSTRPKLTPGTMNQPQSLSSRVFHVGENRMGRYLMSGLLLLALSALNAVAAENPEKTAAVGLGEVCDKSAGPSCKSGLECNSAEPGKAGVCANTTVPEQVAPPTRQQAQ
Ga0132256_10015799943300015372Arabidopsis RhizosphereVPLAFAARPHEKSTRPKLTPGTMNQPQSLSSRVFHVGENRMGRYLMSGLLLLALSAFNAVAAENPEKTAAVGLGEVCDKSAGPSCKSGLECNSAEPGKAGVCANTTVPEQFAPPTRQQAQ
Ga0132255_10038261533300015374Arabidopsis RhizosphereMNQPQSLSSRVFHVGENRMGRYLMSGLLLLALSALNAVAAENPEKTAAVGLGEVCDKSAGPSCKSGLECNSAEPGKAGVCANTTVPEQVAPPTRQQAQ*
Ga0184625_1048237713300018081Groundwater SedimentMGRYLLSGLLLLAFGALNAFAAENPEKPAVGLGEVCDKRIGPLCKSGLDCNSSEPGKAGVCANATVPEQVVPTTPRDQ
Ga0206353_1093950213300020082Corn, Switchgrass And Miscanthus RhizosphereGENRMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ
Ga0242658_122118513300022530SoilEKHAVLSLSLTHKGRRPKPTPGTMNQLRSLSPRVFHLGENRMGRYLLSGLLLLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCASATVPEVVPTTPQHAQ
Ga0242654_1008476313300022726SoilMGRYLLSGLLLLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCASATVPEVVPTTPQHAQ
Ga0207692_1058503913300025898Corn, Switchgrass And Miscanthus RhizosphereRRPKPTPGTMNQLRSLSPRVFHLGENRMVRYLLSGLLLLAFSALNALAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQFVPTTPPHAQ
Ga0207647_1036395323300025904Corn RhizosphereMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQV
Ga0207671_1089943523300025914Corn RhizosphereMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATAPEQVAPTTPQHAQ
Ga0207663_1143314323300025916Corn, Switchgrass And Miscanthus RhizosphereMGRYLLSGLLLLAFSALNALAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVAPTTPQH
Ga0207662_1005143043300025918Switchgrass RhizosphereMGRYLMSGLFLAFSALNPFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ
Ga0207657_1054281023300025919Corn RhizosphereMNQPQSLSPGVFHVGENRMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ
Ga0207681_1036309533300025923Switchgrass RhizosphereMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ
Ga0207701_1093890713300025930Corn, Switchgrass And Miscanthus RhizosphereMGRYLMSGLFLAFSALNAFAAENPEKAAVGLGEVCDKKIGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTPPQRAQ
Ga0207690_1110284923300025932Corn RhizosphereMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKRNGPLCKSGLDCNSSEPGKAGVCANATVPEQVAPTTPQRPQ
Ga0207706_1105220013300025933Corn RhizosphereMNQPQSLSPGVFHVGENRMGRYLMSGLFLAFSALNAFAAENPEKTAVGLGEVCDKRNGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTPPQRAQ
Ga0207669_1152444713300025937Miscanthus RhizosphereQPQSLSLRVVHRRNRMGRYLLSGLLLLAFGALNALAAENPEKAAVGLGEVCDKKIGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTPPQRAQ
Ga0207712_1068077623300025961Switchgrass RhizosphereMGRYLDLLLGLLFLAFGALNALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRAQ
Ga0207640_1072528823300025981Corn RhizosphereMGRYLLSGLLLLAFGALNALAAENPEKAAVGLGEVCDKKIGPLCKSGLDCNSAEPGKAGVCANATVPEQ
Ga0207658_1093016113300025986Switchgrass RhizospherePPNSTPGTMNQPQSLSPGVFHVGENRMGRYLMSGLFLAFSALNPFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHAQ
Ga0207639_1130658713300026041Corn RhizosphereMSRYLLSGLLAFGALNAFAAENPEKPAVGLGEVCDKRNGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTPPQRAQ
Ga0207648_1010861543300026089Miscanthus RhizosphereMGRYLMSGLFLAFSALNPFAAENPEKTAVGLGEVCDKKIGPLCKSGLECNSAVPGKAGVCANATVPEQVAPTTPQHTQ
Ga0207675_100037623103300026118Switchgrass RhizosphereMGRYLMSGLFLAFSALNAFAAENPEKPAVGLGEVCDKKIGPLCKSGLECNSAEPGKAGVCANATVPEQVAPTTPQHAQ
Ga0207683_1100774913300026121Miscanthus RhizosphereMTRAFDLGENRMGRYLDLLLGLLFLAFGALNALAAENPEKAAVGLGEVCDKKVGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTTPQRPQ
Ga0268265_1074066113300028380Switchgrass RhizosphereMGRYLLSGLLLLAFGALNALAAENPEKAAVGLGEVCDKKIGPLCKSGLDCNSAEPGKAGVCANATVPEQVVPTPPQRAQ
Ga0170834_11059289323300031057Forest SoilYLLSGFLLLAFSALNAFAAENPEKTAVGLGEVCEKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVAPTTPQHAQ
Ga0307498_1005335013300031170SoilMGVYLLSGLFLLAFGALNAFAAENLEKKTAVGLGEVCDQKIGPLCKAGLVCNSAEPGKAGVCANATVPEQVVPTPPQRAQ
Ga0170824_11190534713300031231Forest SoilMGRYLLSGLLLLAFSALNAFAAENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVAPTTPQHAQ
Ga0310893_1014385423300031892SoilMGRYLLSGLLLLAFGALNALAAENPEKAAVGLGEVCDKKIGPLCKSGLDCNSAEPGKAGVCADATVPEQVVPTPPQRAQ
Ga0307470_1114249713300032174Hardwood Forest SoilTHPVSVGHRAARCSLRATSQRAPTEADAGTINQPQSLSPRAFDLGENRMGRYLLSGLLLLAFGALNAFAAESPEKAAVGLGEVCDKKIGPLCKSGLDCNSAEPGKAGVCANATIPEQVVPTPPQRAQ
Ga0307471_10120070223300032180Hardwood Forest SoilMGRYLLSGLLLLAFSALNAFAAENPEKPAVGLGEVCDTRNGPLCKSGLDCNSSEPGKAGVCANATVPEQVVPTTPQRAQ
Ga0307471_10232970613300032180Hardwood Forest SoilMGRYLMSGLLLLALSAVNAFATENPEKTAVGLGEVCDKKIGPLCKSGLECNSAEPGKAGVCANATVPEQDVPTTPQHAQ
Ga0307472_10253215013300032205Hardwood Forest SoilFGALDAFAAENPEKPAVGLGEVCDKRNGPLCKSGLDCNSSEPGKAGVCANATVPEQVVPTTPQRAQ
Ga0247830_1037319123300033551SoilMGRYLMSGLLLLALSAVNALATENPEKTAVGLGEVCDKRIGPLCKSGLECNSAEPGKAGVCANATVPEQVAPSTPQRAQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.