Metagenome / Metatranscriptome Family F101785

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F101785
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	113 residues
Representative Sequence	GGWVFRAVGADGSWATFSTDHQLKRSGRLVTAWLRQEFPEPQRSAAGEVYLSDVEKVQYDCGKAQARVLLVIFYAENNLAGAQQSEEADPKQVQWDPIVPGTQSEYIFHWICGDSAGARPR
Number of Associated Samples	90
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.96 %
% of genes near scaffold ends (potentially truncated)	98.04 %
% of genes from short scaffolds (< 2000 bps)	93.14 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (78.431 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.706 % of family members)
Environment Ontology (ENVO)	Unclassified (25.490 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.863 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.71% β-sheet: 29.53% Coil/Unstructured: 63.76%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF14310	Fn3-like	77.45
PF06472	ABC_membrane_2	4.90
PF07715	Plug	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.43 %
Unclassified	root	N/A	21.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.43 %
Unclassified	root	N/A	21.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.43 %
Unclassified	root	N/A	21.57 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	76.47 %
Unclassified	root	N/A	21.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.96 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	49.02 %
Unclassified	root	N/A	21.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	48.04 %
Unclassified	root	N/A	21.57 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.90 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	47.06 %
Unclassified	root	N/A	21.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.98 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Hydrocarboniphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga	47.06 %
Unclassified	root	N/A	21.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	0.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Hydrocarboniphaga effusa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa	47.06 %
Unclassified	root	N/A	21.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.90 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Hydrocarboniphaga effusa AP103	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	47.06 %
Unclassified	root	N/A	21.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.90 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001398\|JGI20207J14881_1036375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	997	Open in IMG/M
3300002245\|JGIcombinedJ26739_100664665	All Organisms → cellular organisms → Bacteria → Proteobacteria	920	Open in IMG/M
3300002245\|JGIcombinedJ26739_100934544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	750	Open in IMG/M
3300002245\|JGIcombinedJ26739_101485533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	572	Open in IMG/M
3300002245\|JGIcombinedJ26739_101867330	Not Available	503	Open in IMG/M
3300002914\|JGI25617J43924_10236338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	614	Open in IMG/M
3300003152\|Ga0052254_1183787	Not Available	534	Open in IMG/M
3300004091\|Ga0062387_101616664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	523	Open in IMG/M
3300004092\|Ga0062389_100285513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1706	Open in IMG/M
3300004092\|Ga0062389_101878841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	777	Open in IMG/M
3300004092\|Ga0062389_103436091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	593	Open in IMG/M
3300005160\|Ga0066820_1021999	Not Available	506	Open in IMG/M
3300005602\|Ga0070762_10238169	All Organisms → cellular organisms → Bacteria → Proteobacteria	1127	Open in IMG/M
3300005610\|Ga0070763_10565087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	656	Open in IMG/M
3300005712\|Ga0070764_10506440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	726	Open in IMG/M
3300005993\|Ga0080027_10096367	All Organisms → cellular organisms → Bacteria → Proteobacteria	1106	Open in IMG/M
3300005993\|Ga0080027_10476171	Not Available	507	Open in IMG/M
3300005995\|Ga0066790_10365268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	616	Open in IMG/M
3300006050\|Ga0075028_100507498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	705	Open in IMG/M
3300006172\|Ga0075018_10713103	Not Available	543	Open in IMG/M
3300006176\|Ga0070765_101065954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	764	Open in IMG/M
3300006176\|Ga0070765_102112167	Not Available	526	Open in IMG/M
3300007258\|Ga0099793_10677267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	520	Open in IMG/M
3300007788\|Ga0099795_10503045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	565	Open in IMG/M
3300009038\|Ga0099829_10171290	Not Available	1743	Open in IMG/M
3300009088\|Ga0099830_10238087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1437	Open in IMG/M
3300010159\|Ga0099796_10030303	Not Available	1754	Open in IMG/M
3300010396\|Ga0134126_12685828	Not Available	540	Open in IMG/M
3300010880\|Ga0126350_11826517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300011271\|Ga0137393_10707825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	862	Open in IMG/M
3300012203\|Ga0137399_10741202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	827	Open in IMG/M
3300012923\|Ga0137359_10057581	All Organisms → cellular organisms → Bacteria → Proteobacteria	3384	Open in IMG/M
3300012923\|Ga0137359_10572954	All Organisms → cellular organisms → Bacteria → Proteobacteria	992	Open in IMG/M
3300012925\|Ga0137419_10597904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	886	Open in IMG/M
3300012944\|Ga0137410_11447728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	598	Open in IMG/M
3300013306\|Ga0163162_12319640	Not Available	617	Open in IMG/M
3300014168\|Ga0181534_10840410	Not Available	545	Open in IMG/M
3300014492\|Ga0182013_10012924	All Organisms → cellular organisms → Bacteria → Proteobacteria	8339	Open in IMG/M
3300014654\|Ga0181525_10403912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	751	Open in IMG/M
3300015193\|Ga0167668_1061210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	768	Open in IMG/M
3300015199\|Ga0167647_1114418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	647	Open in IMG/M
3300015242\|Ga0137412_11073170	Not Available	572	Open in IMG/M
3300019785\|Ga0182022_1242059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1803	Open in IMG/M
3300020004\|Ga0193755_1160837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	674	Open in IMG/M
3300020580\|Ga0210403_10126675	All Organisms → cellular organisms → Bacteria → Proteobacteria	2081	Open in IMG/M
3300020581\|Ga0210399_10739578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	807	Open in IMG/M
3300020582\|Ga0210395_10674773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	774	Open in IMG/M
3300021086\|Ga0179596_10321431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	774	Open in IMG/M
3300021171\|Ga0210405_10320881	All Organisms → cellular organisms → Bacteria → Proteobacteria	1223	Open in IMG/M
3300021178\|Ga0210408_10051897	All Organisms → cellular organisms → Bacteria → Proteobacteria	3207	Open in IMG/M
3300021180\|Ga0210396_11764228	Not Available	501	Open in IMG/M
3300021403\|Ga0210397_10296669	All Organisms → cellular organisms → Bacteria → Proteobacteria	1186	Open in IMG/M
3300021404\|Ga0210389_10810763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	731	Open in IMG/M
3300021420\|Ga0210394_10141688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2086	Open in IMG/M
3300021474\|Ga0210390_10802458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	779	Open in IMG/M
3300024178\|Ga0247694_1025288	Not Available	666	Open in IMG/M
3300024222\|Ga0247691_1024115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	945	Open in IMG/M
3300024287\|Ga0247690_1023450	Not Available	702	Open in IMG/M
3300025505\|Ga0207929_1108894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300025604\|Ga0207930_1104746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	642	Open in IMG/M
3300026281\|Ga0209863_10085766	All Organisms → cellular organisms → Bacteria → Proteobacteria	928	Open in IMG/M
3300026319\|Ga0209647_1162799	All Organisms → cellular organisms → Bacteria → Proteobacteria	906	Open in IMG/M
3300026515\|Ga0257158_1046379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	795	Open in IMG/M
3300027381\|Ga0208983_1085654	Not Available	590	Open in IMG/M
3300027439\|Ga0209332_1097434	Not Available	527	Open in IMG/M
3300027567\|Ga0209115_1047345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	979	Open in IMG/M
3300027575\|Ga0209525_1091405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	723	Open in IMG/M
3300027583\|Ga0209527_1157533	Not Available	502	Open in IMG/M
3300028047\|Ga0209526_10457188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	839	Open in IMG/M
3300028047\|Ga0209526_10744418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	613	Open in IMG/M
3300028773\|Ga0302234_10390329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	596	Open in IMG/M
3300028866\|Ga0302278_10107891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1533	Open in IMG/M
3300029907\|Ga0311329_10602201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	728	Open in IMG/M
3300029911\|Ga0311361_10061773	All Organisms → cellular organisms → Bacteria → Proteobacteria	5820	Open in IMG/M
3300029914\|Ga0311359_10760106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	685	Open in IMG/M
3300029914\|Ga0311359_10982809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	571	Open in IMG/M
3300029953\|Ga0311343_10734732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	817	Open in IMG/M
3300030011\|Ga0302270_10466025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	664	Open in IMG/M
3300030020\|Ga0311344_10994458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	656	Open in IMG/M
3300030294\|Ga0311349_10773316	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300030580\|Ga0311355_10514076	All Organisms → cellular organisms → Bacteria → Proteobacteria	1146	Open in IMG/M
3300030688\|Ga0311345_10359529	All Organisms → cellular organisms → Bacteria → Proteobacteria	1333	Open in IMG/M
3300031047\|Ga0073995_11822738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	820	Open in IMG/M
3300031057\|Ga0170834_112786966	All Organisms → cellular organisms → Bacteria → Proteobacteria	873	Open in IMG/M
3300031057\|Ga0170834_113894630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1299	Open in IMG/M
3300031231\|Ga0170824_113142981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1563	Open in IMG/M
3300031235\|Ga0265330_10512910	Not Available	511	Open in IMG/M
3300031247\|Ga0265340_10513690	Not Available	527	Open in IMG/M
3300031344\|Ga0265316_11232884	Not Available	517	Open in IMG/M
3300031446\|Ga0170820_17129266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	809	Open in IMG/M
3300031708\|Ga0310686_119851825	All Organisms → cellular organisms → Bacteria → Proteobacteria	1368	Open in IMG/M
3300031712\|Ga0265342_10347122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	774	Open in IMG/M
3300031715\|Ga0307476_10511922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	889	Open in IMG/M
3300031718\|Ga0307474_10518399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	936	Open in IMG/M
3300031718\|Ga0307474_10905698	All Organisms → cellular organisms → Bacteria → Proteobacteria	698	Open in IMG/M
3300031754\|Ga0307475_11507184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	516	Open in IMG/M
3300031823\|Ga0307478_10977584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	708	Open in IMG/M
3300031962\|Ga0307479_10590282	All Organisms → cellular organisms → Bacteria → Proteobacteria	1093	Open in IMG/M
3300032515\|Ga0348332_12858765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	751	Open in IMG/M
3300033818\|Ga0334804_163455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa → Hydrocarboniphaga effusa AP103	546	Open in IMG/M
3300033982\|Ga0371487_0026175	All Organisms → cellular organisms → Bacteria → Proteobacteria	3835	Open in IMG/M
3300034163\|Ga0370515_0461388	Not Available	536	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.10%
Host-Associated	Host-Associated	4.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.27%
Aquatic	Environmental → Aquatic	8.82%
Plants	Host-Associated → Plants	4.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.57%
Peat	Environmental → Terrestrial → Peat	13.73%
Freshwater	Environmental → Aquatic → Freshwater	6.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.92%
Sediment	Environmental → Aquatic → Sediment	1.96%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.02%
Loam	Environmental → Terrestrial → Soil → Loam	15.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.96%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.78%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	8.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.94%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	2.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.96%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.98%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.98%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.98%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.98%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001398	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20207J14881_10363752	3300001398	Arctic Peat Soil	PMAWVRTLNPLSAGGWQFRAVAADGSWATFSTDHQMKRSGHVVTLWLRQEYPEAQRTDDGDVYLSDVEKLQYDCTKEQTRALLVIYYAGNALTGSQQSEAADAKQTPWDPIVPGTQSESVFQWACASGHGKTDR*
JGIcombinedJ26739_1006646652	3300002245	Forest Soil	STDHQLTRSGRLVTAWLRKEFPEPQRSASGEAYLSDVEKVQYDCGKVRARVLLVIYYAENNLAGAQQSEXADPKQVGWDPVVPGTQSEYIFRWICSDSAGPRPR*
JGIcombinedJ26739_1009345442	3300002245	Forest Soil	FSTEHQLKRGGHQVTAWLRQEYPEPHRSAAGDVYLSAVEKVQYDCSKERSRVLLVIYYAQNNLAGNQQTEEADPKQTEWDPIVPGTRSEYIFRWLCGDGSTGARPR*
JGIcombinedJ26739_1014855332	3300002245	Forest Soil	WATFSTEHQLKRSGRLVTAWLRQEYPEPQRTAGGDVYSSDVERVQYDCTKEQVRTLLAIYYAGNSLTGSQQSEQVDPKQAAWDPIVPGTQSEIIFHWACGAGSAGARP*
JGIcombinedJ26739_1018673301	3300002245	Forest Soil	ARQREGRKADPMAWVRTLDPMLAGGWVFRAVAGDGSWAAFSTEHQLKRSGHLVTAWLRQEFPEPQRTSAGESYWSDVEKVQYDCASERARVLLAIYYSANNLAGSQQSEELDPKQVAWDAIVPGTQSELIFHWACGEGSAGPRPR*
JGI25617J43924_102363381	3300002914	Grasslands Soil	SPGGWVFRAVGADGSWATFSTDHQLKRSGRLVTAWLRQEFPEPQRSAAGEVYSSDVEKVQYDCGKAQARVMLIIFYSENNLAGAQQTEESDPKQVQWDPIVPGTQSEYIFRWICGDSAGARPR*
Ga0052254_11837871	3300003152	Sediment	SGHMVTAWLRQEFAEPQRNSAGDPYSSAVQRLQYDCAKERRRVLLVIYYASNNLAGNQQSEEADPKQVDWDPIVPGTQSESIFRWTCGKQSAGARP*
Ga0062387_1016166641	3300004091	Bog Forest Soil	QEFPEPQHNSTADLYSSAVEKVQYDCSKERRRVLLAIYYASNNLAGNQQTEEPDPKQIDWDPIVPGTQSESIFRWTCGAGSAGARP*
Ga0062389_1002855131	3300004092	Bog Forest Soil	RTLDPMSAGGWVFRAVGADGSWAAFSTEHQLKRSGRLVTAWLRQEYPEQQRSAAGDAYSSDVERVQYDCGKEQARTLLAIYYAGNNLTGSQQSEQLDPKQAAWDPIVPGTQSETIFHWACSSGSAGARP*
Ga0062389_1018788412	3300004092	Bog Forest Soil	DHQLKRSGHMVTAWLRQEFPEPKRSPAGDVYMSTVEKVQYDCGKERSRVLLVIYYAGNSLAGSQRSEEADPKQIDWDPIVPGTQSESIFRFTCGAASAGARP*
Ga0062389_1034360911	3300004092	Bog Forest Soil	AWLRQEYPEPQRNAAGDVYLSDVEKVQYDCAKERARVLLAIYYGDNNFAGSQHNEEADEKQVEWDPIVPGTQSEYIFHWTCGAGSAGARP*
Ga0066820_10219992	3300005160	Soil	DGSWATFSTDHQLKRSGRQVTAWLRQEYPEPQRSSGGDAYASDVERIQFDCAKVQARVLMIIYYTDNNLSGSQQSEENDPKQTAWDPVVPGTQSEFIFHWACGGSAGSRP*
Ga0070762_102381692	3300005602	Soil	WAAFSTDHQLKRSGHLVTAWLRQEYPEPQRSAAGDVYASDVEKVQYDCTNERARVLLAVFYAANNLAGSQQSEEPDQKQVAWEAIVPGTQSELIFHWACGAGSTGSRPR*
Ga0070763_105650871	3300005610	Soil	LRQEYPEPHRSAAGDVYLSAVEKVQYDCSKERSRVLLVIYYAQNNLAGNQQTEEADPKQTEWDPIVPGTRSEYIFRWLCGDGSTGARPR*
Ga0070764_105064401	3300005712	Soil	DLLAKQRDARKADPMAWVRTLDPMSQGGWTFRAVGTDGSWATFSTEHQMKRSGHQVTLWLRQEYPEPQRNADGDVYVSDVEKIQYDCAKAKAQVLLAVFYTQNNLAGNTQSEEADPKQAAWDPIVPGTQSEIIFRWACGSGSAGPRPG*
Ga0080027_100963671	3300005993	Prmafrost Soil	TAWLRQEYPEPQRNSAGDAYSSDVERIQYDCAKVQARVLMIIYYVENNLSGSQQSEENDPKQTAWDPIVPGTRSEFIFHWACGTGSTGSRP*
Ga0080027_104761711	3300005993	Prmafrost Soil	QREARKADPMAWVRTLDPMSAGGWVFRAVAADGSWAAFSTEHQLKRSGHLVTAWLRQEYPEPQRTAAGEMYSSDVEKVQYDCAGERVRVLLAIFYAANNLAGNQQSEEPDQKQVAWDAIVPGTQSELIFNWACGAGSAGARPR*
Ga0066790_103652682	3300005995	Soil	MSAGGWTFRSVASDGTWAAYSTEHQLKRSGRLVTAWLRQEYPEPQRSAAGDAYSSDVEKVQYDCTNERARVLLAIFYAANNLAGSQQNEEPDQKQVAWEAIVPGTQSEMIFHWACGAGSTGTRPR*
Ga0075028_1005074982	3300006050	Watersheds	RSGRQVTAWLRQEYPEPQRSSGGDAYLSDVERIQFDCAKVQARILMIIYYIDNNLSGSQQSEENDPKQTAWDPVVPGTRSEFIFHWACGGSAGSRP*
Ga0075018_107131032	3300006172	Watersheds	MTWVHTLDPMLPGGWVFRAVGADGSWATFSTEHQLKRSGHLVTAWLRQEYPEPHHTTGGDAYFSDVEKVQYDCAKERARVLLVIYYAENNLSGDQQSEAADPRHLDWDPIVPGTQSEYIFQWTCGGGSAGARPR*
Ga0070765_1010659542	3300006176	Soil	RKEFPEPQRSVSGEAYLSDVEKVQYDCGKVRARVLLVIYYAENNLAGAQQSEEADPKQVTWDPIVPGTQSEYIFHWICRDSAGARPG*
Ga0070765_1021121671	3300006176	Soil	DGSWATFSTEHQLKRSGHLVTAWLRQEYPEQQRTAAGDVYSSDVERVQYDCAKEQVRTLLAIYYAGNNLTGNQQSEQVDPKQAVWDPIVPGTQSETIFHWACGAG*
Ga0099793_106772672	3300007258	Vadose Zone Soil	RQEFPEPQRSAAGEVYLSDVEKVQYDCGKAQARVLLVIFYAENNLAGAQQSEEADPKQVQWDPIVPGTQSEYIFHWICGDSAGARPR*
Ga0099795_105030452	3300007788	Vadose Zone Soil	LDPMTPGGWVFRAVGADGSWATFSTDHQLTRSGRLVTAWLRKEFPEPQRSVAGEAYLSDVEKVQYDCGKVRARVLLVIYYAENNLAGAQQSEEADPKQVGWDPVVPGTQSEYIYRWICGDSAGPRPR*
Ga0099829_101712901	3300009038	Vadose Zone Soil	QRAARRADPMSWVRTLDPMSPGGWVFRAVGADGSWATFSTDHQLKRSGRLVTAWLRQEFPEPQRSAAGEVYSSDVEKVQYDCGKAQARVMLIIFYSENNLAGAQQTEESDPKQVQWDPIVPGTQSEYIFRWICGDSAGARPR*
Ga0099830_102380871	3300009088	Vadose Zone Soil	DPMLWVRTLDPMSAGGGVFRAVGADGSWATFSTDHQLKRSGRLVTAWLRQEFPEPQRSAAGEVYSSDVEKVQYDCGKAQARVMLIIFYSENNLAGAQQTEESDPKQVQWDPIVPGTQSEYIFRWICGDSAGARPR*
Ga0099796_100303031	3300010159	Vadose Zone Soil	DLLAGQRAARRADPMSWVRTLDPMSPGGWVFRAVGADGSWATFSTDHQLKRSGRLVTAWLRQEFPEPQRSAAGEVYSSDVEKVQYDCGKAQARVMLIIFYSENNLAGAQQTEESDPKQVQWDPIVPGTQSEYIFRWICGDSAGARPR*
Ga0134126_126858282	3300010396	Terrestrial Soil	WVRTLDPMTPGGWTFRAVGADGSWAAYSTLHQLKRSGRLVTMWLRQEYPEPQHNAAGDAYSSDVEKIQYDCGKERARVLLVIYYAGNNLSGSQQSDEIDPKQASWDPIVPGTQSEIIFHWACGAGSAGARPG*
Ga0126350_118265171	3300010880	Boreal Forest Soil	LVTAWLRQEYPEPHRSAAGDVYLSAVEKVQYDCSKERSRVLLVIYYAQNNLAGNQQTEEADPKQIEWDPIVPGTRSEYIFRWLCGDGSTGARPR*
Ga0137393_107078251	3300011271	Vadose Zone Soil	VRTLDPLSPGGWVFRAVGADGSWATFSTDHQLKRSGHVVTAWLRQEFPEPQRSAAGDVYLSDVEKVQYDCGKERARVLLIIYYADNNLTGNQHSEEADPKQAGWDPIVPGTQSEYMSRWICGDSAGSRPR*
Ga0137399_107412022	3300012203	Vadose Zone Soil	TRSGRLVTAWLRKEFPEPQRSVAGEAYLSDVEKVQYDCGKVRARVLLVIYYAENNLAGAQQSEEADPKQAGWDPVVPGTQSEYIYRWICGDSAGPRPR*
Ga0137359_100575811	3300012923	Vadose Zone Soil	STDHQLKRSGRLVTAWLRQEFPEPQRSAAGEVYSSDVEKVQYDCGKAQARVMLIIFYSENNLAGAQQTEESDPKQVQWDPIVPGTQSEYIFRWICGDSAGARPR*
Ga0137359_105729541	3300012923	Vadose Zone Soil	GGWVFRAVGADGSWATFSTDHQLKRSGRLVTAWLRQEFPEPQRSAAGEVYLSDVEKVQYDCGKAQARVLLVIFYAENNLAGAQQSEEADPKQVQWDPIVPGTQSEYIFHWICGDSAGARPR*
Ga0137419_105979041	3300012925	Vadose Zone Soil	LAKQRAARRADPMSWVRTLDPMTPGGWVFRAVGADGSWATFSTDHQLKRSGRVVTAWLRQEFPEPQRSAAGEVYSSDVEKVQYDCGKAQARVMLIIFYSENNLAGAQQTEESDPKQVQWDPIVPGTQSEYIFRWICGDSAGARPR*
Ga0137410_114477281	3300012944	Vadose Zone Soil	GRLVTAWLRKEFPEPQRSVAGEAYLSDVEKVQYDCGKVRARVLLVIYYAENNLAGAQQSEEADPKQAGWDPVVPGTQSEYIYRWICGDSAGPRPR*
Ga0163162_123196402	3300013306	Switchgrass Rhizosphere	WEFRAVGADGSWATFSTDHQLKRSGRQVTAWLRQEYPEPQRSSGGDAYASDVERIQFDCAKVQARVLMIIYYTDNNLSGSQQSEENDPKQTAWDPVVPGTQSEFIFRWACGGSTGSRP*
Ga0181534_108404101	3300014168	Bog	ADPMAWVRTLDPMSAGGWTFRAVGPDGSWATFSTDHQMKHSGHLVTVWLRQEYPEPQKSPEGDFYSSDVEKVQYDGAKVQARALIVIYYAGNSLGGNQQTEEADVKQLPWEPIVPGTQDELMYRWACSDVKTKAASSP*
Ga0182013_100129241	3300014492	Bog	QRTAGGDPYSSDVEKVQYDCSKEQARVMLVIYYTENNLAGSQQSEQADLKQVPWDPIVPGTQSEFIFHWACGTGSAGPRPG*
Ga0181525_104039122	3300014654	Bog	FSTEHQMKRSGHLVTVWLRQEFPELQRTAGGEVFASDVEKVQYDCAKSRAQVLLAIYYSQNNLAGSQLTEESDPKQAAWDPIVPGTQSEITFHWACGTSSAGARPG*
Ga0167668_10612102	3300015193	Glacier Forefield Soil	FSTEHQLKRSGNLVSAWLRKEYAEPHRSAAGDAYLSDVERVQYDCAKELVRVLLVVYYAENNLAGSQQTEAADPKQVGWDPIVPGTQSESTSRWTCATGSTGARPR*
Ga0167647_11144182	3300015199	Glacier Forefield Soil	AKQRQARRTDPMAWVRSLDPLSAGGWTFRAAAADGSWAAFSTAHQMKKSGRQVTVWLRQEYPEPQKSAGGDVYWSDVEKMQYDCAKERARVLLVIYYSENNLAGTQQGDEADPQTVAWDPIVPGTQSEYMFQWACAPGNTPR*
Ga0137412_110731701	3300015242	Vadose Zone Soil	WVRTLDPMTPGGWVFRAVGADGSWATFSTDHQLKRSGRLVTAWLRQEFPEPQRSAAGEVYSSDVEKVQYDCGKAQARVMLIIFYSENNLAGAQQTEESDPKQVQWDPIVPGTQSEYIFRWICGDSAGARPR*
Ga0182022_12420592	3300019785	Fen	VAAPGISGAAKNAGGDIYWSDVEKLQYDCTKEQARVLLTVYYAANNLAGAQQSEESDVKAAPWEAIVPGTQSEFTFHWACGGGAR
Ga0193755_11608372	3300020004	Soil	DGSWATFSTEHQMKRSGRLVTAWLRQEYPEPHHTSGGDAFLSDVEKVQYDCAKERARVLLVIYYAQNNLAGDQQSEAADPKQAQWDPIVPGTQSESIFQWTCGAGSAGTRPR
Ga0210403_101266752	3300020580	Soil	RADPMAWVRTLDPMSPGGWVFRAVGSDGSWATFSTDHQLKRSGHVVTAWLRQEFPEPKRSTEGEAYLSDVEKVQYDCGKERARVLLIIYYADNNLAGSQQSEESDPKQAEWDPIVPGTQSEYIFHWICGGSAGARP
Ga0210399_107395782	3300020581	Soil	LLARQRAARRADPMSWVRTLDPMSPGGWTFRAVGADGSWATFSTDHQLKRSGRLVTAWMRQEFPEPQRSGGGEVYLSDVEKVQYDCGKAQARVLLIIFYAENNLAGAQQSEEADPKQAEWDPIVPGTQSEYVFHWICGDSAGTRPR
Ga0210395_106747731	3300020582	Soil	EARRADPMAWVGTLDPMSSGGWTFKAVGADGSWATFSTEHQLKRGGHQVTAWLRQEYPEPHRSAAGDVYLSAVEKVQYDCSKERSRVLLVIYYAQNNLAGNQQTEEADPKQTEWDPIVPGTRSEYIFRWLCGDGSTGARPR
Ga0179596_103214312	3300021086	Vadose Zone Soil	ADPMSWVRTLDPMAPGGWVFRAVGADGSWATFSTDHQLKRSGRLVTAWLRQEFPEPQRSAAGEVYSSDVEKVQYDCGKERARVLLIIYYADNNLTGNQHSEEADPKQAGWDPIVPGTQSEYMSRWICGDSAGSRPR
Ga0210405_103208812	3300021171	Soil	GGWTFKAVGADGSWATFSTEHQLKRSGHLVTAWLRQEYPEPHRSAAGDVYLSAVEKVQYDCSKERSRVLLVIYYAQNNLAGNQQTEEADPKQTEWDPIVPGTRSEYIFRWLCGDGSTGARPR
Ga0210408_100518971	3300021178	Soil	AGEVYMSDVEKVQYDCGKAQARVMLIIFYTENNLAGAQQTEEADPKQVQWDPIVPGTQSEYIFRWICGDSAGTRPR
Ga0210396_117642281	3300021180	Soil	FRAVGADGSWATFSTEHQLKRSGRLVTAWLRQEYPEPQRTAGGDVYSSDVERVQYDCNKEQVRTLLAIYYAGNSLSGSQQSEQVDPKQAAWDPIVPGTQSEIIFHWACGAGSTGARP
Ga0210397_102966692	3300021403	Soil	GWEFRAVGADGSWATFSTDHQLKRSGRQVTAWLRQEYPEPQRSSGGDAYASDVERIQFDCAKVQARVLMIIYYTDNNLSGSQQSEENDPKQTAWDPVVPGTQSEFIFHWACGGSAGSRP
Ga0210389_108107632	3300021404	Soil	SDGSWAMFSTEHQLKRSGHQVTAWLRQEFPEAQQNPAGDTYLSDVEKVQYDCTKSQARVLLVIYYAANNLTGSQQSDETDPKQAPWDAIVPGTQGETAFHWTCGSGSAGARP
Ga0210394_101416881	3300021420	Soil	DPMSWVRTLDPMSAGGWTFRAVGADGSWATFTTEHQLKRSGRLVTAWLRQEYPEPQRSPDGDPYSSDVEKVQYDCTKEQARVLLAIYYAGNNLAGTQQSEEADPKLVSWDPIVPGTQSELTFHWACSASASAGTRPR
Ga0210390_108024582	3300021474	Soil	SGGWTFKAVGADGSWATFSTEHQLKRSGHLVTAWLRQEYPESHRSAAGDAYLSAVEKVQYDCSKERSRVVLVIYYAQNNLAGNQQTEEADPKQTEWDAIVPGTRSEYIFRWLCGDGSTGARPR
Ga0247694_10252882	3300024178	Soil	LKRSGRQVTAWLRQEYPEPQRSSGGDAYASDVERIQFDCAKVQARVLMIIYYTDNNLSGSQQSEENDPKQTAWDPVVPGTQSEFIFHWACGGSAGSRP
Ga0247691_10241152	3300024222	Soil	TDHQLKRSGRQVTAWLRQEYPEPQRSSGGDAYASDVERIQFDCAKVQARVLMIIYYTDNNLSGSQQSEENDPKQTAWDPVVPGTQSEFIFHWACGGSAGSRP
Ga0247690_10234502	3300024287	Soil	RAVGADGSWATFSTDHQLKRSGRQVTAWLRQEYPEPQRSSGGDAYASDVERIQFDCAKVQARVLMIIYYTDNNLSGSQQSEENDPKQTAWDPVVPGTQSEFIFHWACGGSAGSRP
Ga0207929_11088941	3300025505	Arctic Peat Soil	LRQEYPEPHHTTGGDAFLSDVEKVQYDCAKERTRVLLVIYYAENNLAGDQQSEAADPKQVDWDPIVPGTQSEYIFQWTCGAGSAGPRPR
Ga0207930_11047461	3300025604	Arctic Peat Soil	WLRQEYAEPQRSAAGDVHLSDVEKVQYDCAKERARVLLAIYYAENNLAGSQQSEEADPKQVEWDPIVPGTQSEFSFHWACGAGSSGARR
Ga0209863_100857661	3300026281	Prmafrost Soil	QEYPEPQRNSAGDAYSSDVERIQYDCAKVQARVLMIIYYVENNLSGSQQSEENDPKQTAWDPIVPGTRSEFIFHWACGTGSTGSRP
Ga0209647_11627992	3300026319	Grasslands Soil	QEFPEPQRSAAGEVYSSDVEKVQYDCGKAQARVMLIIFYSENNLAGAQQTEESDPKQVQWDPIVPGTQSEYIFRWICGDSAGARPR
Ga0257158_10463792	3300026515	Soil	PMTPGGWVFRAVGADGSWATFSTDHQLKRSGRLVTAWLRQEFPEPQRSAAGEVYLSDVEKVQYDCGKAQARVMLIIFYSENNLAGTQQTEEADPKQVQWDPIVPGTQSEYIFRWICGDSAGARPR
Ga0208983_10856542	3300027381	Forest Soil	AQRAARRADPMAWVRTLNPMAAGGWQFRAVAPDGSWASFSTEHQLKRSGHTVTAWLRQEYAEPHRSADGDVYLSEVEKVQYDCAKERARVLLVIRYAENNLTGSQQSDAADPKQTEWDPVVPGTQSEYTFRWTCDAGSAGTRPR
Ga0209332_10974341	3300027439	Forest Soil	PMAWVRALDPMASGGWVFRAVGADGSWATFSTDHQLKRSGHIVTAWLRQEFPESQRSAGGEAYLSDVEKVEYDCGKVRVRVLLIIYYSGNNLTGNQQSEEADPKQAPWDPVVPGTQSESAFHWTCGGSAGTRP
Ga0209115_10473451	3300027567	Forest Soil	GWVFRSVGTDGSWATFSTEHQLKRSGHLVTAWLRQEYPEPQRTAGGDVYSSDVERVQYDCTKEQVRTLLAIYYAGNSLTGSQQSEQVDPKQAAWDPIVPGTQSEITFHWACGAGSAAARP
Ga0209525_10914051	3300027575	Forest Soil	LVTAWLRKEFPEPQRSASGEAYLSDVEKVQYDCGKVRARVLLVIYYAENNLAGAQQSEEADPKQVGWDPVVPGTQSEYIFRWICSDSAGPRPR
Ga0209527_11575331	3300027583	Forest Soil	LDPMASGGWVFRAVGADGSWATFSTDHQLKRSGHIVTAWLRQEFPEPQRSAGGEVYLSDVEKVQYDCAKVLARVLLIIYYSGNSLTGNQQSEEADPKQAPWDPVVPGTQSESAFHWTCGGSAGTRP
Ga0209526_104571881	3300028047	Forest Soil	PMASGGWVFRAVGADGSWATFSTDHQLKRSGHIVTAWLRQEYPEPQRSAGGEVYLSEVEKVQYDCGKVLARVLLAIYYSDNNLTGSQQSEESDPKQVQWDPVVPGTQSEFVYHWTCGGSAGARP
Ga0209526_107444181	3300028047	Forest Soil	GWVFRAVGADGSWAMFSTDHQLTRSGNVVTAWLRQEFPEPQRSGGGGGAVYLSNVQKVQYDCGKARARILLVIYYAENNLAGTQQSEEADPKQVQWDPIVPGTQSESAFQWTCGGSAGAR
Ga0302234_103903292	3300028773	Palsa	HQLKHSHHMATAWLRQEYAEPQRSSAGDVYSSDVQKIQYDCAKEQARVLLAVYYSQNNLTGSQQSEESDPKDKEAVWDAIVPGTQSEITFRWACGPSSARARPG
Ga0302278_101078911	3300028866	Bog	QEYPEPQRNADGDAYVSDVEKIQYDCAKAKAQVLLAVFYTQNNLAGNQQSEEADPKQAAWDAIVPGTQSEIIFRWACGTGSAGTRPG
Ga0311329_106022011	3300029907	Bog	SGHQVTVWLRQEYPEPQRNADGDAYVSDVEKIQYDCAKAKAQVLLAVFYTQNNLAGNQQSEEADPKQAAWDAIVPGTQSEIIFRWACGTGSAGTRPG
Ga0311361_100617731	3300029911	Bog	MQRSRHQVTVWLRQEYPEPQRNGDGDVYSSDVEKIQYDCAKARAQVLLAVYYAQNNLAGNQQSEEADPKQAAWDAIVPGTQSEIIFRWACGSGSTGARPG
Ga0311359_107601062	3300029914	Bog	RSGHLVTAWLRQEFPEAQHSPGGEAYLSDVEKVQYDCGKERARVMLIIYYTGNNLSGGQQSEQADPKQIEWDPIVPGTQSESIFHWTCGSTGPRP
Ga0311359_109828091	3300029914	Bog	FSTEHQMKRSGHQVTVWLRQEYPEPQRNADGDAYVSDVEKIQYDCAKAKAQVLLAVFYTQNNLAGNQQSEEADPKQAAWDAIVPGTQSEIIFRWACGTGSAGTRPG
Ga0311343_107347321	3300029953	Bog	AWVRTLDPMSQGGWMFRAVGTDGSWATFSTEHQMKRSGHQVTVWLRQEYPEPQRNADGDAYVSDVEKIQYDCAKAKAQVLLAVFYTQNNLAGNQQSEEADPKQAAWDAIVPGTQSEIIFRWACGTGSAGTRPG
Ga0302270_104660252	3300030011	Bog	HLVTAWLRQEFPEAQHSPGGEAYLSDVEKVQYDCGKERARVMLIIYYTGNNLSGGQQSEQADPKQIEWDPIVPGTQSESIFHWTCGSTGPRP
Ga0311344_109944582	3300030020	Bog	PEPQRNADGDAYVSDVEKIQYDCAKAKAQVLLAVFYTQNNLAGNQQSEEADPKQAAWDAIVPGTQSEIIFRWACGTGSAGTRPG
Ga0311349_107733161	3300030294	Fen	RLVTAWLRREFPEPQRSAAGDMYSSDVEKVQYDCGKERARVLLVVYYSDNNLAGSQQSEEADPRQAAWDPVVPGTQSELIFHWACDAGSTGARPG
Ga0311355_105140761	3300030580	Palsa	GSWAIFSTEHQLKHSHHMATAWLRQEYAEPQRSSAGDVYSSDVQKIQYDCAKEQARVLLAVYYSQNNLTGSQQSEESDPKDKEAVWDAIVPGTQSEITFRWACGPSSARARPG
Ga0311345_103595292	3300030688	Bog	GSWATFSTEHQMKRSGHQVTVWLRQEYPEPQRNADGDAYVSDVEKIQYDCAKAKAQVLLAVFYTQNNLAGNQQSEEADPKQAAWDAIVPGTQSEIIFRWACGTGSAGTRPG
Ga0073995_118227382	3300031047	Soil	AWLRQEFPEPQRTAAGDVYSSDVQKVQYDCAKARARVLLVVYYAASNLTGSQQSEEADPKQLDWDPIVPGTQSETIFRWLCDGSAGARP
Ga0170834_1127869661	3300031057	Forest Soil	LFHRSAAGDAYSSDVQKIQYDCAKEQARVLLAIYYAQNNLAGSQQSEEADPKLAAWDAIVPGTQSEFIFHWACGAPSAGARP
Ga0170834_1138946301	3300031057	Forest Soil	QRSAAGEVYLSDVEKVQYDCGKAQAQVMLIIFYSENNLAGAQQTEESDPKQVQWDPIVPGTQSEYIFRWICGDSAGARPR
Ga0170824_1131429812	3300031231	Forest Soil	SWVRTLDPMSPGGWVFRAVGADGSWATFSTDHQLKRSGRLVTAWLRQEFPEPQRSAAGEVYLSDVEKVQYDCGKAQAQVMLIIFYSENNLAGAQQTEESDPKQVQWDPIVPGTQSEYIFRWICGDSAGARPR
Ga0265330_105129101	3300031235	Rhizosphere	AKAERLAREREARRADPMAWVRTLDPMSPGGWEFRAVGADGSWATFSTDHQLKRSGHLVTAWLRQEYAEPHRSPAGDIYSSDVEKVQYDCAKDRARVMLIIYYAENNLAGNQQTEEADPKQPDWEAIVPGTQSEYIFRWICGTGSAGPRP
Ga0265340_105136901	3300031247	Rhizosphere	EMLATQRAARRADPMKWVRTLDPMSAGGWVFRAVAPDGSWAAFSTEHQLKRSGHLVTAWLRQEFPEPQRIAAADAYLSDVEKVQYDCVKEQARVLLAIYYSANNLAGSQQSEEADLKLVAWDAIVPGTQSEIIYRWACGSAGTRP
Ga0265316_112328841	3300031344	Rhizosphere	AREREARRADPMAWVRTLDPMSPGGWEFRAVGADGSWATFSTDHQLKRSGHLVTAWLRQEYAEPHRSPAGDIYSSDVEKVQYDCAKDRARVMLIIYYAENNLAGNQQTEEADPKQPDWEAIVPGTQSEYIFRWICGTGSAGPRP
Ga0170820_171292661	3300031446	Forest Soil	AVGADGSWATFSTDHQLKRSGRQVTAWLRQEYPEPQRSSGGDAYASDVERIQFDCAKVQARVLMIIYYTDNNLSGSQQSEENDPKQTAWDPVVPGTQSEFIFHWACGGSAGSRP
Ga0310686_1198518251	3300031708	Soil	QTCALPIYLVTAWLRQEYPEQQRSAAGDAYASDVERVQYDCAKEQVRTLLAIYYAGNNLTGSQQSDQVDPKQAAWDPIVPGTQSEAIFHWACGAGSAGARP
Ga0265342_103471222	3300031712	Rhizosphere	PQRIAAADAYLSDVEKVQYDCVKEQARVLLAIYYSANNLAGSQQSEEADLKLVAWDAIVPGTQSEIIYHWACGSAGTRP
Ga0307476_105119222	3300031715	Hardwood Forest Soil	MSSGGWTFKAVGADGSWATFSTEHQLKRGGHQVTAWLRQEYPEPHRSAAGDVYLSAVEKVQYDCSKERSRVLLVIYYAQNNLAGNQQTEEADPKQTEWDPIVPGTRSEYIFRWLCGDGSTGARPR
Ga0307474_105183992	3300031718	Hardwood Forest Soil	GWEFRAVATDGSWATYSTDHQLKRSGHLVTAWLRQEYPEPHRSDVGEAYLSDVEKVQFDCAKERSRVMLIIYYAENNLAGSQRTEEADPKQIDWDPIVPGTRSESIFHWICGAGSTGARP
Ga0307474_109056981	3300031718	Hardwood Forest Soil	AGDGSWAVFSTEHQMKRSGHQVTAWLRQEYPEPQRSPTGDLYSSAVEKVQYDCAKERAHVLVAVYYSGNNLAGSQQSEEADPKQAVWDSIVPGTQSELIYRWACGGA
Ga0307475_115071841	3300031754	Hardwood Forest Soil	QLKRSGRLVTAWLRQEFPEPQRSAAGEVYLSDVEKVQYDCGKAQARVMLIIYYAENNLAGAQQSDVADPKQVEWDPIVPGTQSEYIFHWICGDSAGARPR
Ga0307478_109775842	3300031823	Hardwood Forest Soil	PMAWVGTLDPMSSGGWTFKAVGADGSWATFSTEHQLKRSGHLVTAWLRQEYPEPHRSAAGDVYLSAVEKVQYDCSKERSRVLLVIYYAQNNLAGNQQTEEADPKQTEWDPIVPGTRSEYIFRWLCGDGSTGARPR
Ga0307479_105902821	3300031962	Hardwood Forest Soil	WATFSTDHQLKRSGRLVTAWLRQEFPEPQRSAAGEVYLSDVEKVQYDCGKAQARVLLVIFYAENNLAGTEQSEEADPKQVQWDPIVPGTQSEYIFHWICSDSAGARPR
Ga0348332_128587652	3300032515	Plant Litter	WVFRAVGTDGSWATFSTEHQMKRSGHQVTVWLRQEYPEPQRSADGDVYVSDVEKIQYDCAKAKAQVLLAIYYSQNNLSGNQQSEEADPKQAAWDAIVPGTQSEIIFRWVCGTGSAGTRPG
Ga0334804_163455_3_293	3300033818	Soil	GHLVTAWLRQEYPEPQRTAGGDPYSSDVEKVQYDCSKEQARVMLVIYYTENNLAGSQQSEQADLKQVPWDPIVPGTQSEFIFHWACGTGSAGPRPG
Ga0371487_0026175_3520_3834	3300033982	Peat Soil	TDHQLKRSGHLVTAWLRQEFPEPQRSAAGDPYMSNVQKIQYDCTKERARVLLVIYYAGNNLSGSQQTEEADPKQVDWDPIVPGTQSETIFHWTCGGGSAGAKPP
Ga0370515_0461388_75_479	3300034163	Untreated Peat Soil	MAWVRTLDPMSAGGWAFRSVASDGSWAAFSTEHQLKRSGHLVAAWLRQEYPEPQRSAAGDTYFSDVEKVQYDCTNERARVLLAIFYASNNLAGSQQSEEPDQKQVAWEAIVPGTQSELIYHWACGASSTGTRPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101785

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences