Metagenome / Metatranscriptome Family F101761

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101761
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	76 residues
Representative Sequence	MTQPTLPAEILEKRAAEQRRALHNDVQQLRSAVRTEVRERTDVKRNIRRHFAPIAGATALIALSLGYGLTGIFTRD
Number of Associated Samples	71
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.37 %
% of genes near scaffold ends (potentially truncated)	21.57 %
% of genes from short scaffolds (< 2000 bps)	77.45 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (13.725 % of family members)
Environment Ontology (ENVO)	Unclassified (28.431 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.569 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.38% β-sheet: 0.00% Coil/Unstructured: 34.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF07332	Phage_holin_3_6	51.96
PF10604	Polyketide_cyc2	15.69
PF05163	DinB	1.96
PF04879	Molybdop_Fe4S4	1.96
PF02843	GARS_C	0.98
PF00190	Cupin_1	0.98
PF13601	HTH_34	0.98
PF00154	RecA	0.98
PF07238	PilZ	0.98
PF01047	MarR	0.98
PF02538	Hydantoinase_B	0.98
PF02559	CarD_CdnL_TRCF	0.98
PF02768	DNA_pol3_beta_3	0.98
PF13493	DUF4118	0.98
PF02470	MlaD	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.96
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.96
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.98
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.98
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.49 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	46.08 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	20.59 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.08 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	17.65 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.08 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17.65 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.08 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.96 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.98 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.98 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.08 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.96 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.98 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.98 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.98 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1010172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1524	Open in IMG/M
3300002568\|C688J35102_120036212	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300002568\|C688J35102_120776206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1548	Open in IMG/M
3300004104\|Ga0058891_1410581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	963	Open in IMG/M
3300004153\|Ga0063455_100772715	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005167\|Ga0066672_10606204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300005175\|Ga0066673_10000950	All Organisms → cellular organisms → Bacteria	9438	Open in IMG/M
3300005175\|Ga0066673_10426624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300005176\|Ga0066679_10299404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300005176\|Ga0066679_10451772	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	841	Open in IMG/M
3300005180\|Ga0066685_10853865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	612	Open in IMG/M
3300005184\|Ga0066671_10244855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1101	Open in IMG/M
3300005332\|Ga0066388_100087239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3526	Open in IMG/M
3300005332\|Ga0066388_101829836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1081	Open in IMG/M
3300005434\|Ga0070709_10077473	All Organisms → cellular organisms → Bacteria	2161	Open in IMG/M
3300005434\|Ga0070709_11062233	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300005435\|Ga0070714_101910558	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005435\|Ga0070714_102052769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005436\|Ga0070713_100762146	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300005436\|Ga0070713_101580917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300005454\|Ga0066687_10002782	All Organisms → cellular organisms → Bacteria	5682	Open in IMG/M
3300005454\|Ga0066687_10501055	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300005518\|Ga0070699_102041642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300005526\|Ga0073909_10094116	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1173	Open in IMG/M
3300005529\|Ga0070741_10006611	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	24779	Open in IMG/M
3300005529\|Ga0070741_10082732	All Organisms → cellular organisms → Bacteria	3517	Open in IMG/M
3300005529\|Ga0070741_10395637	All Organisms → cellular organisms → Bacteria → Acidobacteria	1271	Open in IMG/M
3300005532\|Ga0070739_10402050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	636	Open in IMG/M
3300005534\|Ga0070735_10175522	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300005534\|Ga0070735_10293114	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	981	Open in IMG/M
3300005537\|Ga0070730_10022951	All Organisms → cellular organisms → Bacteria	4811	Open in IMG/M
3300005537\|Ga0070730_10275647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1106	Open in IMG/M
3300005561\|Ga0066699_10003937	All Organisms → cellular organisms → Bacteria	6268	Open in IMG/M
3300005561\|Ga0066699_10088687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2012	Open in IMG/M
3300005568\|Ga0066703_10408338	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300005575\|Ga0066702_10637341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300005575\|Ga0066702_10933241	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005576\|Ga0066708_10628042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300005764\|Ga0066903_104101904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	780	Open in IMG/M
3300006173\|Ga0070716_100277191	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300006755\|Ga0079222_10848208	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300006804\|Ga0079221_10284398	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300006804\|Ga0079221_10443398	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300006806\|Ga0079220_10697461	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300006806\|Ga0079220_12152079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300006903\|Ga0075426_10015134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5508	Open in IMG/M
3300006914\|Ga0075436_100003790	All Organisms → cellular organisms → Bacteria	10369	Open in IMG/M
3300010043\|Ga0126380_10137704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1540	Open in IMG/M
3300010047\|Ga0126382_12500918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300010152\|Ga0126318_10910117	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300010321\|Ga0134067_10209249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300010337\|Ga0134062_10031175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2101	Open in IMG/M
3300010360\|Ga0126372_13047051	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	520	Open in IMG/M
3300010371\|Ga0134125_10135216	All Organisms → cellular organisms → Bacteria → Acidobacteria	2744	Open in IMG/M
3300010376\|Ga0126381_100208839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2616	Open in IMG/M
3300010396\|Ga0134126_10268616	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300010396\|Ga0134126_10412413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1568	Open in IMG/M
3300010396\|Ga0134126_12974694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300011120\|Ga0150983_10729502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1791	Open in IMG/M
3300011120\|Ga0150983_10901103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300012212\|Ga0150985_115231562	All Organisms → cellular organisms → Bacteria → Acidobacteria	2626	Open in IMG/M
3300012212\|Ga0150985_115554022	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300012469\|Ga0150984_106908222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300012977\|Ga0134087_10790664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300013307\|Ga0157372_10968228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300015356\|Ga0134073_10186342	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300018431\|Ga0066655_10108604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1569	Open in IMG/M
3300018433\|Ga0066667_10024844	All Organisms → cellular organisms → Bacteria	3262	Open in IMG/M
3300018433\|Ga0066667_12042843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300018468\|Ga0066662_10228971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1498	Open in IMG/M
3300018468\|Ga0066662_10520532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300018468\|Ga0066662_11589230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300018468\|Ga0066662_12871848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300018482\|Ga0066669_10426473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1132	Open in IMG/M
3300020069\|Ga0197907_10517459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1590	Open in IMG/M
3300020579\|Ga0210407_10302914	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1248	Open in IMG/M
3300020579\|Ga0210407_10450458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007	Open in IMG/M
3300021170\|Ga0210400_10279408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1368	Open in IMG/M
3300021170\|Ga0210400_10997116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300021358\|Ga0213873_10239845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300021432\|Ga0210384_11077521	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300021560\|Ga0126371_10000003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	140280	Open in IMG/M
3300021953\|Ga0213880_10079993	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300025912\|Ga0207707_11130721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300025939\|Ga0207665_10433367	All Organisms → cellular organisms → Bacteria → Acidobacteria	1006	Open in IMG/M
3300026312\|Ga0209153_1097418	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300027706\|Ga0209581_1000434	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	90862	Open in IMG/M
3300027725\|Ga0209178_1298222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300027725\|Ga0209178_1335530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300027857\|Ga0209166_10019383	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4265	Open in IMG/M
3300027857\|Ga0209166_10236571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300027903\|Ga0209488_10099141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2182	Open in IMG/M
3300027986\|Ga0209168_10410129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300031718\|Ga0307474_10277741	All Organisms → cellular organisms → Bacteria → Acidobacteria	1287	Open in IMG/M
3300031753\|Ga0307477_10020556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4509	Open in IMG/M
3300031754\|Ga0307475_10602568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300031823\|Ga0307478_11396199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300031962\|Ga0307479_10094604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2900	Open in IMG/M
3300031962\|Ga0307479_10495822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1205	Open in IMG/M
3300031962\|Ga0307479_10946802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300031962\|Ga0307479_11851721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300032180\|Ga0307471_103320746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.14%
Host-Associated	Host-Associated	6.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.16%
Plants	Host-Associated → Plants	6.86%
Aquatic	Environmental → Aquatic	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.96%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.59%
Loam	Environmental → Terrestrial → Soil → Loam	20.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	12.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10101723	3300000579	Forest Soil	MTQPTLPTEILEQRAAEQRRALHNDVQELRSVVRAEVRERTDVKRIVRRNFAPAAGAAVVISLALGYGVAGIFTRD*
C688J35102_1200362122	3300002568	Soil	MTQPTLPAEILEKRAAEQRRALHNDVQQLRSAVRTEVRERTDVKRNIRRHFAPIAGATALIALSLGYGLTGIFTRD*
C688J35102_1207762062	3300002568	Soil	MTQPSLPAEILEKRAAEQRRSLHNNVQQLRSVVRHEVQERTDVKRNVRRHFAPIAGASAVLALAFGYGAAGIFTRR*
Ga0058891_14105813	3300004104	Forest Soil	MTQPVLPTEILEQRAAEQRRALHNDVQELRSVVRAEVRERTDVKRIVRMNFAPVAGAVAVVALAFGYGVARIFTRD*
Ga0063455_1007727152	3300004153	Soil	MTMPVVPAEILEARAAQQRRTLHNDVQQLRSVVEAEVRERIDVKRNVRRYFGPIAGVTALIALSVGYAATGIFTRD*
Ga0066672_106062042	3300005167	Soil	MTQPTLPAEILEQRAAEQRRALHNDVQELRSVVRSEVRERTDVKRNVRRHFAPVSGVTALIALSLGYGVCGIFMRD*
Ga0066673_100009507	3300005175	Soil	MTQATFPTEILEQHAAEQRRALHNDVQHLRSVVRSEVRERTDVKRVVRRHFAVVAAATAVLALSFGYGFTGIFTRE*
Ga0066673_104266242	3300005175	Soil	MTQPTLPAEILERRAAEQRRALHNDVQQLRSVVRAEVRERTDVKRNIRRHFAPIAGAIALIAVSVGYGVTGIFTRD*
Ga0066679_102994042	3300005176	Soil	MTQPTLPTEILEQRAAEQRRALHNDVQQLRSVVRSEVRERTDVKRLVRRHFAPASAVMALAALSLGYGLVGIFTRD*
Ga0066679_104517723	3300005176	Soil	MTQPTLPAEILEQRAAEQRRALHNDVQELRSAVRSEVRERTDVKRIVRRHFAPVTAVTALAALSLGYRLVGIFTRD*
Ga0066685_108538652	3300005180	Soil	QATFPTEILEQHAAEQRRALHNDVQHLRSVVRSEVRERTDVKRVVRRHFAVVAAATAVLALSFGYGFTGIFTRE*
Ga0066671_102448553	3300005184	Soil	MTQPTLPAEILEQRAAEQRRALHNDVQELRSAVRSEVRERTDVKRIVRRHFAPVTAVTALAALSLGYGLV
Ga0066388_1000872395	3300005332	Tropical Forest Soil	MTQPTLPTEILEQRAAEQRRALHNDVQELRSRVRSEVRERTDVKRVVRRNFAPVAGATAVMALAFGYGVAGIFTRD*
Ga0066388_1018298362	3300005332	Tropical Forest Soil	MRQPNLPTEILEQRAAEQRRALHNDVQELRSVVRAEVRERTNVKRLARRHFAPAVGATAVVALAFGYGMAGIFTRD*
Ga0070709_100774733	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTTQAQLPTEILERRAAEQRRALHNRVQELRSTIRHEIQERTDLKRNVRRHFAPIAGATAVIALGLGYGAAGIFTRH*
Ga0070709_110622331	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTTQPQFPTEILEQRAAEQRRTLHNRVQELRSTIRHEIRERTDLKRNVRRHFAPSAGAAAVVALGLGYGAAGIFTKH*
Ga0070714_1019105581	3300005435	Agricultural Soil	MTTQAQLPTETLERRAAEQRRALHNRVQELRSTIRHEIQERTDLKRNVRRHFAPIAGATAVIALGLGYGAAGIFTRH*
Ga0070714_1020527691	3300005435	Agricultural Soil	TQPQFPTEILEQRAAEQRRTLHNRVQELRSTIRHEIRERTDLKRNVRRHFAPIAGAAAVVALGLGYGAAGIFTKH*
Ga0070713_1007621462	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTTQPQFPTEILEQRAAEQRRTLHNRVQELRSTIRHEIRERTDLKRNVRRHFAPIAGAAAVVALGLGYGAAGIFTKH*
Ga0070713_1015809172	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTQPVMPQEILERRAAEQRRALHNDVQQLRSVVTHEVRERTDVKRNVRRHFSPIAAATAVIALSVGYGFAGIFTKH*
Ga0066687_100027826	3300005454	Soil	MTQPTLPAEILEQRAAEQRRALHNDVQELRSAVRSEVRERTDVKRIVRRHFAPVTAVTALAALSLGYGLVGIFTRD*
Ga0066687_105010552	3300005454	Soil	LPTEILEKRAAEQRRSLHNDVQQLRSVVRHEVRERTDVKRNVRRHFAPIAGAAAVLALSLGYGAAGIFMRH*
Ga0070699_1020416422	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VTGMTQARPNLPAEILEKRAAEQRRALHNDVRELRSAVRHEIRERTDIKRNVRRHFAPIAGGAAVVALALGYGTAGIFTRH*
Ga0073909_100941163	3300005526	Surface Soil	MTQPNLPTEILEQRAAEQRRALHNDVQELRSVVRAEVRERTDVKRIVRSHFAPVAGAAAVVALAFGYGVAGIFTRD*
Ga0070741_1000661121	3300005529	Surface Soil	MTQAQPQLPAEILEKRAAEQRRALHNDVRELRSAVRHEIRERTDIKRNVRRHFAPIAGGTAVVALALGYGTAGIFTRH*
Ga0070741_100827324	3300005529	Surface Soil	MTQAQPNLPTEILEKRAAEQRRALHNDVQQLRSAVRHEIRERTDIKRNVRRHFAPIAGGTAVVALALGYGSAGIFTRH*
Ga0070741_103956373	3300005529	Surface Soil	MTQAQPNLPAEILEKRAAEQRRALHNDVQQLRSAVRHEIRERTDIKRNVRRHFAPVAGATAVVALALGYGTAGIFTRH*
Ga0070739_104020501	3300005532	Surface Soil	MTQAQPQLPAEILEKRAAEQRRALHNDVQQLRSAVRQEIRERTDIKRNVRRHFAPVAGATAVVALALGYGTAGIFTRH*
Ga0070735_101755222	3300005534	Surface Soil	MTQPTVPAEILEQRAAEQRRALHNDVRQLRSVVEAEVRERIDVRRNVARYFGPIAGASALIALSLGYSLTGIFTDR*
Ga0070735_102931142	3300005534	Surface Soil	MTQPTFPTEILEAKAAEQRRALHNDIQQLRSVVESEVRERIDLKRNLRRHFGPIAGVTALVALSLGYSLTGIFERD*
Ga0070730_100229517	3300005537	Surface Soil	MTQPIVPTEILEAKAAEQRRALHNDVQQLRSVVESEVRERIDVKRNVLRYFGPIAGVTALVALTLGYGVIGIFTRD*
Ga0070730_102756473	3300005537	Surface Soil	MTQPAMPTEILEQRAAEQRRALHNDVQQLRTMVEAEVREKVDEVKDRLDVKRNVSRHFALAAGAAAVIALSLGYNVAGIFTDR*
Ga0066699_100039374	3300005561	Soil	MTQPTLPAEILEQRAAEQRRALHNDVQELRSAVRSEVRERTDVKRIVRRHFSPITAVTALAALSLGYGLVGIFTRD*
Ga0066699_100886871	3300005561	Soil	MTQPTLPAEILERRAAEQRRALHNDVQQLRSVVRAEVRERTDVKRNIRRHFAPIAGAIALIAVSVG
Ga0066703_104083381	3300005568	Soil	MTQPSLPAEILEKRAAEQRRSLHNDVQQLRSVVRHEVQERTDVKRNVRRHFAPIAGASAVLALAFGYGAAGIFTRR*
Ga0066702_106373411	3300005575	Soil	MTQPSLPAEILEKRAAEQRRSLHNDVQQLRSVVRQEVQERTDVKRNVRRHFVPIAGVSAVLALACGYGAAGIFTRH
Ga0066702_109332411	3300005575	Soil	EQRAAEQRRALHNDVQELRSVVRSEVRERTDVKRNVRRHFAPISGVTALIALSLGYGACGIFMRD*
Ga0066708_106280422	3300005576	Soil	MTQPTLPAEILEQRAAEQRRALHNDVQELRSVVRSEVRERTDVKCNVRRHFAPVSGVTALIALSLGYGACGIFMRD*
Ga0066903_1041019042	3300005764	Tropical Forest Soil	MTQSTLPTEILEQRAAEQRRSLHKGVQQLRSVMRSEVRERTDVNRHVRRHFTPVAVVTALAALSFGYGLAGIFTRD*
Ga0070716_1002771911	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTTQAQLPTEILERRAAEQRRALHNRVQELRSTIRHEIQERTDLKRNVRRHCAPIAGATAVIALGLGYGAAGIFTRH*
Ga0079222_108482082	3300006755	Agricultural Soil	MTTQPQLPTEILEKRAAEQRRALHNRVQELRSTIRHEIRERTDLKRNIRRHFAPIAGATAVVALGLGYRAAGIFTRY*
Ga0079221_102843982	3300006804	Agricultural Soil	MTQSTLPTEILEQRAAEQRRSLHDDVQQLRSVVGSEVRERTDVKRQVRRHFAPVAGVTALAALSIGYGLVGIFTRD*
Ga0079221_104433982	3300006804	Agricultural Soil	MTQVQPQLPAEILEKRAAEQRRALHNDVQQLRSAVRHEIRERTDVKRNVRRHFAPIAGATALVALTLGYGTAGIFTRH*
Ga0079220_106974612	3300006806	Agricultural Soil	MTTQPQLPTEILEKRAAEQRRALHNRVQELRSTIRHEIRERTDLKRNIRRHFAPIAGATAVVALGLGYGAAGIFTRY*
Ga0079220_121520791	3300006806	Agricultural Soil	MTQAQPQLPAEILEKRAAEQRRALHNDVRELRSAVRHEIRERTDIKRNVRRHFAPIAGGTAVVALALGYGT
Ga0075426_100151346	3300006903	Populus Rhizosphere	MTQAQPNLPAEILEKRAAEQRRALHNDVRELRSAVRHEIRERTDIKRNVRRHFAPIAGGAAVVALALGYGTAGIFTRH*
Ga0075436_1000037908	3300006914	Populus Rhizosphere	MTQARPNLPAEILEKRAAEQRRALHNDVRELRSAVRHEIRERTDIKRNVRRHFAPIAGGAAVVALALGYGTAGIFTRH*
Ga0126380_101377043	3300010043	Tropical Forest Soil	MTQPTLPTEILEQRAAEQRRALHNDVQELRSRVRSEVRERTDVKRVVRRNFAPVAGATAVMALAFGY
Ga0126382_125009181	3300010047	Tropical Forest Soil	MTQPTLPTEILEQRAAEQRRALHNDVQELRSRVRSEVRERTDVKRVVRRNFAPVAGAAAVMALAFGYGV
Ga0126318_109101172	3300010152	Soil	MTQAQPNLPTEILEKRAAEQRRALHNDVQQLRSAVRHEIRERTDVKRNVRRHFAPIAGGTAIVALALGYGSAGIFTRH*
Ga0134067_102092491	3300010321	Grasslands Soil	TFPTEILEQHAAEQRRALHNDVQHLRSVVRSEVRERTDVKRVVRRHFAVVAAATAVLALSFGYGFTGIFTRE*
Ga0134062_100311755	3300010337	Grasslands Soil	MTQATFPTEIIEQHAAEQRRALQNDVQHLRSVVRSEVRERTDVKRVVRRHFAVVAAATAVLALSFGYGFTGIFTRE*
Ga0126372_130470511	3300010360	Tropical Forest Soil	EQRAAEQRRALHNDVQELRSRVRSEVRERTDVKRVVRRNFAPVAGATAVMALAFGYGVAGIFTRD*
Ga0134125_101352163	3300010371	Terrestrial Soil	MTQPSVPTEILEKRAAEQRRALHNDVQHLRSAVRHEVRERTDIKRNVRRHFAPIAGAAAVFALTLGYGTAGIFTRH*
Ga0126381_1002088395	3300010376	Tropical Forest Soil	MTSATLPAELLEQRAAEQRRSLHNNVQQLRSRVRSEVRERTDVKRHVRRHFAPVAALAAVVALSFGYGLVGIFTRD*
Ga0134126_102686161	3300010396	Terrestrial Soil	RAAEQRRALHNDVQHLRSAVRHEVRERTDIKRNVRRHFAPIAGAAAVFALTLGYGTAGIFTRH*
Ga0134126_104124133	3300010396	Terrestrial Soil	MTQAQLQLPAEILEKRAAEQRRALHNDVQELRSAVRHEIRERTDIKRNVRRHFAPIAGGTAVVALALGYGTAGIFTRH*
Ga0134126_129746942	3300010396	Terrestrial Soil	MTQAQPNLPTEILEKRAAEQRRALHNDVQQLRSAVRHEIRERTDLKRNVRRHFAPIAGGTAIVALALG*
Ga0150983_107295024	3300011120	Forest Soil	MTQPVLPTEILEQRAAEQRRALHNDVQELRSVVRAEVHERTDVKRIVRMNFAPVAGAVAVVALAFGYGVARIFTRD*
Ga0150983_109011031	3300011120	Forest Soil	MMQPTVPTEILEEKAAEQRRVLRDDVQQLRSVVESEVRERIDLKRNVLRYFGPIVGVSALVALSLGYSLTGIFTRD*
Ga0150985_1152315624	3300012212	Avena Fatua Rhizosphere	MTQPTVPAEILEKRAAEQRRALHNDVQQLRSAVRTEVRERTDVKRNIRRHFAPIAGATALIALSLGYGLTGIFTRD*
Ga0150985_1155540223	3300012212	Avena Fatua Rhizosphere	MTQPSLPAEILEKRAAEQRRSLHNDVQQLRSVVRHEVQERTDVKRNIRRHFAPIAGVSAVLALAVGYGAAGIFTRH*
Ga0150984_1069082222	3300012469	Avena Fatua Rhizosphere	KEDQIWIQNEAVAGMTMPVVPAEILEARAAQQRRTLHNDVQQLRSVVEAEVRERIDVKRNVRRYFGPIAGVTALIALSVGYAATGIFTRD*
Ga0134087_107906641	3300012977	Grasslands Soil	MTHATFPTEILEQHAAEQRRALHNDVQHLRSVVRSEVRERTDVKRVVRRHFAVVAAATAVLALSFGYGFTGIFTRE*
Ga0157372_109682281	3300013307	Corn Rhizosphere	MTQPSVPTEILEKRAAEQRRALHNDVQQLRSAVRHEVRERTDVKRNVRRHFAPIAGATAVVALTLGYGTAGIFTRH*
Ga0134073_101863422	3300015356	Grasslands Soil	EVAGMTQPTLPAEILEQRAAEQRRALHNDVQELRSVVRSEVRERTDVKRNVSRHFAPVSGVTALIALSLGYGACGIFMRD*
Ga0066655_101086043	3300018431	Grasslands Soil	MTQPSLPAEILEKRAAEQRRSLHNDVQQLRSVVRHEVQERTDVKRNVRRHFAPIAGASAVLALAFGYGAAGIFTRR
Ga0066667_100248445	3300018433	Grasslands Soil	MTQATFPTEILEQHAAEQRRALHNDVQHLRSVVRSEVRERTDVKRVVRRHFAVVAAATAVLALSFGYGFTGIFTRE
Ga0066667_120428431	3300018433	Grasslands Soil	RSDLDSERSEVTGMTQPTLPAEILEKRAAEQRRALHNDVQQLRSAVRTEVRERTDVKRNIRRHFAPIAGATALIALSLGYGLTGIFTRD
Ga0066662_102289712	3300018468	Grasslands Soil	MTQPTLPAEILEQRAAEQRRALHNDVQELRSVVRSEVRERTDVKRNVRRHFAPISGVTALIALSLGYGACGIFMRD
Ga0066662_105205323	3300018468	Grasslands Soil	MTQPSLPAEILEKRAAEQRRSLHNDVQQLRSVVRQEVQERTDVKRNVRRHFVPIAGVTAVLALACGYGAAGIFTRH
Ga0066662_115892301	3300018468	Grasslands Soil	MTQPTLPAEILEQRAAEQRRALHNDVQELRSAVRSEVRERTDVKRIVRRHFAPVTAVTALAALSLGYGLVGIFTRD
Ga0066662_128718482	3300018468	Grasslands Soil	MTMPVVPAEILEARAAQQRRTLHNDVQQLRSVVEAEVRERIDVKRNVRRYFGPIAGVTALIALSVGYAATGIFTRD
Ga0066669_104264732	3300018482	Grasslands Soil	MTQPTLPAEILERRAAEQRRALHNDVQQLRSVVRAEVRERTDVKRNIRRHFAPIAGAIALIAVSVGYGVTGIFTRD
Ga0197907_105174592	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MTQARPNLPAEILEKRAAEQRRALHNDVRELRSAVRHEIRERTDIKRNVRRHFAPIAGGAAVVALALGYGTAGIFTRH
Ga0210407_103029143	3300020579	Soil	MTQPVLPTEILEQRAAEQRRALHNDVQELRSVVRAEVRERTDVKRIVRMNFAPVAGAVAVVALAFGYGVARIFTRD
Ga0210407_104504583	3300020579	Soil	MMQPNVPTEILEAKAAEQRRVLHNDVQQLRSVVESEVRERIDLKRNVLRYFGPIVGVSALVALSLGYSLTGIFTRD
Ga0210400_102794082	3300021170	Soil	MMQPTVPTEVLEAKAAEQRRVLHNDVQQLRSVVESEVRERIDLKRNVLRYFGPIVGVSALVALSLGYSLTGIFTRD
Ga0210400_109971162	3300021170	Soil	MTQSTIPAEILEKRAAEQRRALHNDVQQLRTVVKAEVRERIDVKRNVSRHFAPIAGATALIALSLGYRLTGIFTER
Ga0213873_102398451	3300021358	Rhizosphere	MTQPTVPAEILEKRAAEQRRALHNDVQQLRSMVETEVRDRVEEVREHLDVKRNVARHFAPIAGAAALVALSLGYGFGGIFTDR
Ga0210384_110775212	3300021432	Soil	MTQPAIPAEILEKRAAEQRRALHNDVQQLRTVVEAEVRERIDVKRNVSRHFAPIAGATALIALSLGYRLTGIFTER
Ga0126371_1000000392	3300021560	Tropical Forest Soil	MTQSTLPTEILEQRAAEQRRSLHKGVQQLRSVMRSEVRERTDVNRHVRRHFTPVAVVTALAALSFGYGLAGIFTRD
Ga0213880_100799932	3300021953	Exposed Rock	TQPTLPAEILEKRAAEQRRALHNDVQQLRSVVRAEVRERVDDVKERLDVKKNVARYFGPVAGVTALLALSLGYGLTGVFVD
Ga0207707_111307212	3300025912	Corn Rhizosphere	MTQARPNLPAEILEKRAAEQRRALHNDVRELRSAVRHEIRERTDIKRNVRRHFAPIAGGAAVVALA
Ga0207665_104333673	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTTQAQLPTEILERRAAEQRRALHNRVQELRSTIRHEIQERTDLKRNVRRHCAPIAGATAVIALGLGYGAAGIFTRH
Ga0209153_10974183	3300026312	Soil	MTQPTLPAEILEQRAAEQRRALHNDVQELRSAVRSEVRERTDVKRIVRRHFAPVTAVTALAALSLGYGLVG
Ga0209581_100043437	3300027706	Surface Soil	MTQAQPNLPAEILEKRAAEQRRALHNDVQQLRSAVRHEIRERTDIKRNVRRHFAPVAGATAVVALALGYGTAGIFTRH
Ga0209178_12982222	3300027725	Agricultural Soil	MTQSTLPTEILEQRAAEQRRSLHDDVQQLRSVVGSEVRERTDVKRQVRRHFAPVAGVTALAALSIGYGLVGIFTRD
Ga0209178_13355302	3300027725	Agricultural Soil	MTQVQPQLPAEILEKRAAEQRRALHNDVQQLRSAVRHEIRERTDVKRNVRRHFAPIAGATALVALTLGYGTAGIFTRH
Ga0209166_100193837	3300027857	Surface Soil	MTQPIVPTEILEAKAAEQRRALHNDVQQLRSVVESEVRERIDVKRNVLRYFGPIAGVTALVALTLGYGVIGIFTRD
Ga0209166_102365713	3300027857	Surface Soil	MTQPAMPTEILEQRAAEQRRALHNDVQQLRTMVEAEVREKVDEVKDRLDVKRNVSRHFALAAGAAAVIALSLGYNVAGIFTDR
Ga0209488_100991413	3300027903	Vadose Zone Soil	MTQPSLPAEILEKRAAEQRRNLHNDVQQLRSVVRHEVRERTDLKRNVRRHFAPIAGASALIALSLGYGAAGIFTRH
Ga0209168_104101292	3300027986	Surface Soil	MTQPTVPAEILEQRAAEQRRALHNDVRQLRSVVEAEVRERIDVRRNVARYFGPIAGASALIALSLGYSLTGIFTDR
Ga0307474_102777413	3300031718	Hardwood Forest Soil	MTQPTIPAEILEKRAAEQRRALHNDVQQLRTVVEAEVRERIDVKRNVSRHFAPIAGATALIALSLGYRLTGIFTER
Ga0307477_100205566	3300031753	Hardwood Forest Soil	MTQPTIPAEILEKRAAEQRRALHNDVQQLRTVVKAEVRERIDVKRNVSRHFAPIAGATALIALSLGYRLTGIFTER
Ga0307475_106025683	3300031754	Hardwood Forest Soil	MTQPTLPAETLEQRADEQRRMLHNDVQHLRSAVRSEVRERTDVKRVVRRHFAPVTAVAALAALSLGYGLVGIFTRD
Ga0307478_113961992	3300031823	Hardwood Forest Soil	MTQPTFPTEILEAKAAEQRRALHNDIQQLRSVVESEVRERIDLKRNLRRHFGPIAGVTALVALSLGYSLTGIFKPD
Ga0307479_100946043	3300031962	Hardwood Forest Soil	MMQPTVPTEILEAKAAEQRRVLHNDVQQLRSVVESEVRERIDLKRNVLRYFGPIVGVSALVALSLGYSLTGIFARD
Ga0307479_104958221	3300031962	Hardwood Forest Soil	VTPPTVPTEILEAKAAEQRRALHNDVQQLRSVVESEVRERIGVKRNVRRYFGPIAAVTALVALSLGYGFTGIFARD
Ga0307479_109468022	3300031962	Hardwood Forest Soil	MTQPTVPTEILEARAAEQRRVLHNDVQQLRSVVESEVRERIDMKRNVRRYFGPIAGVTALVALSLGYGLAGIFTRD
Ga0307479_118517211	3300031962	Hardwood Forest Soil	KQKAAEQRRVLHNDVQQLRSVVESEVRERIDLKRNVLRYFGPIVGVSALVALSLGYSLTGIFTRD
Ga0307471_1033207461	3300032180	Hardwood Forest Soil	MTQPNLPTEILEQRAAEQRRALHNDVQELRSVVRAEVRERTDVKRIVRMNFAPVAGAVAVVALAFGYGVARIFTRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101761

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences