Metagenome Family F101754

Basic Information
Family ID	F101754
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	58 residues
Representative Sequence	KAKRYVFRLTEKPFRHLKPGRYLVQVRVGTSRTALGPAASRQLTIRKARSNSAR
Number of Associated Samples	80
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	1.96 %
% of genes from short scaffolds (< 2000 bps)	1.96 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere (12.745 % of family members)
Environment Ontology (ENVO)	Unclassified (60.784 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (76.471 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 26.83% Coil/Unstructured: 73.17%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF04828	GFA	15.69
PF00296	Bac_luciferase	13.73
PF00486	Trans_reg_C	4.90
PF00072	Response_reg	3.92
PF13671	AAA_33	2.94
PF00196	GerE	2.94
PF14378	PAP2_3	1.96
PF00704	Glyco_hydro_18	0.98
PF01569	PAP2	0.98
PF01425	Amidase	0.98
PF03098	An_peroxidase	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	15.69
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	13.73
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.98

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300012955\|Ga0164298_11655508	Not Available	506	Open in IMG/M
3300026089\|Ga0207648_11418308	Not Available	653	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	67.65%
Environmental	Environmental	31.37%
Engineered	Engineered	0.98%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	67.65%
Terrestrial	Environmental → Terrestrial	31.37%
Solid Waste	Engineered → Solid Waste	0.98%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	32.35%
Soil	Environmental → Terrestrial → Soil	31.37%
Grass	Engineered → Solid Waste → Grass	0.98%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	30.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	29.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.61%
Loam	Environmental → Terrestrial → Soil → Loam	11.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.88%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.96%
Composting	Engineered → Solid Waste → Grass → Composting	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	30.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	29.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.96%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	12.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_00766790	2170459015	Switchgrass, Maize And Mischanthus Litter	FRLTEKPFRHLKPGRYLVQVRVGTSRTALGPATSRQITIRKARSHTAR
C688J35102_1178771331	3300002568	Soil	KRYVFRLTERKLRNLKSGQYLVEVRVGSSRQSLGPAKGRIVTIRRGRATSAR*
C688J35102_1207612333	3300002568	Soil	VFRLTEKPFRHLKPGRYLVQVRVGSSRTALGPPTSRQILIKAARSHTAR*
Ga0063455_1007166791	3300004153	Soil	FRLSKVNKRSNRRHVATVFRSTSKAKRYVFRLIEKPLRNLKPGRYVIEIRVGTSRQSLGPVTSRVFTIRRGRATVAR*
Ga0068869_1016914471	3300005334	Miscanthus Rhizosphere	TVYRKAPKAKRYVFRLTEKPFRHLKPGRYLVQVRVGTSRTALGPAASRQVTIRKARSNRAR*
Ga0070682_1002050081	3300005337	Corn Rhizosphere	TPKAKRYVFRLTERPFRHLRAGRYLIQVRVGTSRTALGPAASRQITIRRGRESSAR*
Ga0068868_1020245611	3300005338	Miscanthus Rhizosphere	RHLKPGRYLVSVRVGSSRTALGPATTREIRVEAARSHTAR*
Ga0070687_1001295402	3300005343	Switchgrass Rhizosphere	AKRYVFRLTEKPFRHLKPGRYLIQVRVGTSRTALGPAASRQLTIRKAGSHTAR*
Ga0070661_1015840492	3300005344	Corn Rhizosphere	KAKRYVFRLTEKPFRHLKPGRYLVQLHVGASRTALGPAASRQITIRKARSHTAR*
Ga0070678_1003000233	3300005456	Miscanthus Rhizosphere	YVFRLTERPFRHLKPGRYLIQVRVGTSPTALGPPASRQITIRRARSARAR*
Ga0068867_1019253092	3300005459	Miscanthus Rhizosphere	KAPKAKRYVFRLTEKPFRHLKPGRYLIQVRVGTSRTALGPAASRQLTIRKAGSHTAR*
Ga0070693_1003499622	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LDKRTSRGSKRSMRHVATVFRKTTAAKRYVFRLTGKPFRHLKPGRYLVQVRVGPSRSALGPAVTRELTVRRSRSKIAR*
Ga0070664_1021185851	3300005564	Corn Rhizosphere	VHVATVYRKAPKAKRYVFRLTEKPFRHLKPGRYLVQVRVGASRTALGPAASRQLTIRKARSHTAR*
Ga0070702_1002772011	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PSSVHIATVYRRTPKAKRYVFRLTEKPFRHLRPGRYLIQVRVGTSPTALGPAASRQITIRRGRSSSAR*
Ga0068852_1004366232	3300005616	Corn Rhizosphere	ATVYRKTTKAKRYVFRLTEKPFRHLKPGRYLVQVRVGTSRTTLGPAASRQHTIRKARSHSAR*
Ga0068852_1006516941	3300005616	Corn Rhizosphere	EKPFRHLKPGRYLVQVRVGTSRTALGPAASRQLTIRKARSNSAR*
Ga0068852_1027101101	3300005616	Corn Rhizosphere	FRHLKPGRYLVQVRVGPSRTALGPAASRQLTIRKARSQTAR*
Ga0068859_1023498532	3300005617	Switchgrass Rhizosphere	IATVYRRTPKAKRYVFRLTEKPFRHLRPGRYLIQVRVGTSPTALGPAASRQITIRRGRSSSAR*
Ga0068864_1003083014	3300005618	Switchgrass Rhizosphere	RQPSSVHIATVYRRTPKAKRYVFRLTERPFRHLKPGRYLIQVRVGTSPTALGPPASRQITIRRARSARAR*
Ga0068864_1004072652	3300005618	Switchgrass Rhizosphere	PSSVHIATVYRKASKAKRYVFRLTEKPFRHLKPGRYLVQVRVGTSRTALGPATSRQLTIRKARSNTAR*
Ga0068861_1002622962	3300005719	Switchgrass Rhizosphere	RLTDKRFRHLKPGRYLVQVRVGPSRAALGPAVTREITVRRAPSKIAR*
Ga0068858_1018133612	3300005842	Switchgrass Rhizosphere	PKAKRYVFRLTEKPFRHLRPGRYLIQVRVGTSPTALGPAASRQITIRTGRSSSAR*
Ga0068862_1002671071	3300005844	Switchgrass Rhizosphere	YVFRLTEKPFRHLKPGRYLVQVRVGASRTALGPAASRQVTIRKARSKSAR*
Ga0070716_1004440681	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	KAKRYVFRLTEKPFRHLKPGRYLVQVRVGASRTALGPAASRQITIRKARSNSAR*
Ga0075425_1011007961	3300006854	Populus Rhizosphere	KAKRYVFRLTEKPFRHLKPGRYLIQVRVGTSRTALGPAASRQLTIRKAGSHTAR*
Ga0068865_1004214873	3300006881	Miscanthus Rhizosphere	PKAKRYVFRLTEKPFRHLKPGRYLVQVRVGTSRTTLGPAASRQHTIRKARSHSAR*
Ga0075424_1013592862	3300006904	Populus Rhizosphere	PKAKRYVFRLTEKPFRHLKPGRYLVQVRVGTSRTALGPATSRQLTIRKARSNTAR*
Ga0105244_104966021	3300009036	Miscanthus Rhizosphere	KAKRYVFRLTEKPFRHLKPGRYLVQVRVGASRTALGPAASRQLTIRKARSNSAR*
Ga0111539_102064391	3300009094	Populus Rhizosphere	EKPFRHLKPGRYLVQVRVGTSRTALGPAASRQITIRKARSNSAR*
Ga0111539_110429471	3300009094	Populus Rhizosphere	LTERPFRHLKPGRYLIQVRVGTSPTALGPPASRQITIRRARSARAR*
Ga0111539_131567532	3300009094	Populus Rhizosphere	RYVFRLTEKPFRHLKPGRYLVQVRVGASRTALGPATSRQITVRRSRSKIAR*
Ga0105245_110535002	3300009098	Miscanthus Rhizosphere	RLTEKPFRHLKPGRYLVQVRVGPSRTALGPAASRQLTIRKARSHTAR*
Ga0105245_115555591	3300009098	Miscanthus Rhizosphere	VIKRTGRPRRPSSVPIATVYRRTPKAKRYVFRLTEKPFRHLRPGRYLIQVRVGTSPTALGPAASRQITIRRGRSSSAR*
Ga0105247_108616772	3300009101	Switchgrass Rhizosphere	VIKRTSKARQKPSTVHVATVYRKAPKAKRYVFRLTEKPFRHLKPGRYLVQVRVGTSRTALGPAASRQVTIRKARSNSAR*
Ga0105247_118482521	3300009101	Switchgrass Rhizosphere	YRKAPKAKRYVFRLTEKPFRHLKPGRYLVQVRVGASRTALGPAASRQITIRKARSHTAR*
Ga0111538_117812972	3300009156	Populus Rhizosphere	ATVYRRTPKARRYVFRLTERPFRHLKPGRYLIQVRVGTSPTALGPPASRQITIRRARSARAR*
Ga0105241_112239641	3300009174	Corn Rhizosphere	VHVATVYRTTHTAKRYVFRLTEKKLRHLKPGRYLVEVRVGTSRAKLGPAKFRTVTIKRAKR*
Ga0105241_117702192	3300009174	Corn Rhizosphere	YVFRLTEKPFRHLRPGRYLIQVRVGTSPTALGPAASRQITIRRGRSSSAR*
Ga0105242_107316011	3300009176	Miscanthus Rhizosphere	HNAKRYVFRLTNKRLRHLKPGRYLIEVRVGSSRSGLGPAVFRTVTIKRAKR*
Ga0105242_124096361	3300009176	Miscanthus Rhizosphere	FRLTEKKLRHLKPGRYLVEVRVGTSRAKLGPAKFRTVTIKRAKR*
Ga0105248_109488993	3300009177	Switchgrass Rhizosphere	RRHAPRAVDITTVYRRTPKAKRYVFRLTERPFRHLRAGRYLIQVRVGTSPTALGPPASRQITIRRARSARAR*
Ga0105238_115231831	3300009551	Corn Rhizosphere	GARRHAPRAVDITTVYRRTPKAKRYVFRLTERPFRHLRAGRYLIQVRVGTSRTALGPAASRQITIRRGRESSAR*
Ga0105249_116680791	3300009553	Switchgrass Rhizosphere	KAKRYVFRLTEKPFRHLKPGRYLVQVRVGASRTALGPAASRQLTIRKARSHSAR*
Ga0105249_121742501	3300009553	Switchgrass Rhizosphere	ATVYRRTPKAKRYVFRLTERPFRHLKPGRYLIQVRVGTSPTALGPPASRQITIRRARSARAR*
Ga0126372_128141342	3300010360	Tropical Forest Soil	VKRNSTKTKALPSTIHIATVYRHTKGAKRYVFRLTEKPFRHLKPGRYLVMVRVGKSRSTLGPATTRQITIRRGSSKNAR*
Ga0134125_103482851	3300010371	Terrestrial Soil	KRTSRNRRHATTVHVGTVYRKTTVAKRYVFRLTEKPFRHLKPGRYLVSVRVGPSRTALGPATTREIQVKAARSHTAR*
Ga0105239_125564262	3300010375	Corn Rhizosphere	YRKAPKAKRYVFRLTEKPFRHLKPGRYLVQVRVGPSRTALGPAASRQLTIRKARSHTAR*
Ga0134122_113399982	3300010400	Terrestrial Soil	SASEKRAAKLHIATVFRNTSKAKRYVFRLTEKPFRHLKPGTYLIQVRVGRSRTTLGPATSRQITIRRGGTKTAR*
Ga0105246_124266061	3300011119	Miscanthus Rhizosphere	NKRLRHLKPGRYLIEVRVGSSRSRLGPAVFRTVTIKRAKR*
Ga0164300_107754391	3300012951	Soil	AKRYVFRLTEKKLRHLKPGRYLVEVRVGTSRAKLGPAKFRTVTIKRAKR*
Ga0164298_116555082	3300012955	Soil	SVIKRTSKARTVPSSVQIATVYRKAPQAKRYVFRLTEKPFRHLKPGRYLVQVRVGPSRTALGPATSRQLTIQKVRSHSAR*
Ga0164299_107415521	3300012958	Soil	PSSVHIATVYRKAPKAKRYVFRLTEKPFRHLKPGRYLVQVRVGASRTALGPAASRQLTIRKARSHTAR*
Ga0164301_117562541	3300012960	Soil	THKAKRYVFRLTEKKLRHLKPGRYLVEVRVGTSRAKLGPAKFRTVTIKRAKR*
Ga0164302_117682721	3300012961	Soil	IATVYRKTTKAKRYVFRLTEKPFRHLRPGRYLIQVRVGTSRTALGPVASRQITIRRGRSSSAR*
Ga0164308_115659771	3300012985	Soil	RYVFRLTEKPFRHLKPGRYLIQVRVGASRTALGPAASRQITIRKARSNSAR*
Ga0164308_117626391	3300012985	Soil	YVFRLTEKKLRHLKPGRYLVEVRVGTSRAKLGPAKFRTVTIKRAKR*
Ga0164304_100911611	3300012986	Soil	TVYRKAPQAKRYVFRLTEKPFRHLKPGRYLVQVRVGPSRTALGPATSRQLTIQKVRSHSAR*
Ga0157371_107131491	3300013102	Corn Rhizosphere	RYLVQVRVGTSRTALGPATSRQLTIRKARSHTAR*
Ga0157378_109808331	3300013297	Miscanthus Rhizosphere	KAKRYVFRLTERKLRHLKPGRYLVEVRVGTSRAKLGPAKFRTVTIKRAKR*
Ga0157375_114019171	3300013308	Miscanthus Rhizosphere	KAKRYVFRLTERPFRHLKPGRYLVQVRVGTSRTALGPAASRQITIPRGRSASAR*
Ga0157380_106292001	3300014326	Switchgrass Rhizosphere	RYVFRLTEKPFRHLKPGRYLVQVRVGASRTALGPAASRQVTIRKARSKSAR*
Ga0157380_108129222	3300014326	Switchgrass Rhizosphere	TGKARQPSSVHIATVYRRAPKAKRYVFRLTEKPFRHLKPGRYLIQVRVGTSRTALGPAASRQLTIRKAGSHTAR*
Ga0182008_105590741	3300014497	Rhizosphere	RALRNLRPATYLVQVRVGTSRKTLGPATSRVVTIKARKARHAG*
Ga0163161_107025762	3300017792	Switchgrass Rhizosphere	KRTGARRHAPRAVDITTVYRRTPKAKRYVFRLTERPFRHLRAGRYLIQVRVGTSRTALGPAASRQITIRRGRESSAR
Ga0163161_116377211	3300017792	Switchgrass Rhizosphere	AKRYVFRLTEKPFRHLKPGRYLVQVRVGTSRTTLGPAASRQHTIRKARSHSAR
Ga0207642_105148622	3300025899	Miscanthus Rhizosphere	APRAVDITTVYRRTPKAKRYVFRLTERPFRHLRAGRYLIQVRVGTSRTALGPAASRQITIRRGRESSAR
Ga0207688_100500033	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	SKARQRPSSVHIATVYRKAPKAKRYVFRLTEKPFRHLKPGRYLVQVRVGASRTALGPAASRQVTIRKARSKSAR
Ga0207662_102496883	3300025918	Switchgrass Rhizosphere	VDITTVYRRTPKAKRYVFRLTERPFRHLRAGRYLIQVRVGTSRTALGPAASRQITIRRGRESSAR
Ga0207649_112709411	3300025920	Corn Rhizosphere	RVHVATVYRKAPNAKRYVFRLTEKPFRHLKPGRYLIQVRVGTSRTALGPAASRQLTIRKAGSHTAR
Ga0207694_109007811	3300025924	Corn Rhizosphere	KAPNAKRYVFRLTEKPFRHLKPGRYLIQVRVGTSRTALGPAASRQLTIRKAGSHTAR
Ga0207687_105547953	3300025927	Miscanthus Rhizosphere	VIKRTGRPRRPSSVPIATVYRRTPKAKRYVFRLTEKPFRHLRPGRYLIQVRVGTSPTALGPAASRQITIRRGRSSSAR
Ga0207644_107460781	3300025931	Switchgrass Rhizosphere	GRYLVQVRVGSSRTALGPPSSRQIVIKAARSHTAR
Ga0207686_113328931	3300025934	Miscanthus Rhizosphere	HKAKRYVFRLTEKKLRHLKPGRYLVEVRVGTSRAKLGPAKFRTVTIKRAKR
Ga0207670_106965541	3300025936	Switchgrass Rhizosphere	LTERPFRHLKPGRYLIQVRVGTSRTALGPAASRQITIRRGRSASAR
Ga0207704_100313881	3300025938	Miscanthus Rhizosphere	RKTTKAKRYVFRLTEKPFRHLKPGRYLVQVRVGTSRTTLGPAASRQHTIRKARSHSAR
Ga0207689_101363131	3300025942	Miscanthus Rhizosphere	KPGRYLIQVRVGTSPTALGPPASRQITIRRARSARAR
Ga0207667_109952741	3300025949	Corn Rhizosphere	HAPRAVDITTVYRRTPKAKRYVFRLTERPFRHLRAGRYLIQVRVGTSRTALGPAASRQITIRRGRESSAR
Ga0207668_117834342	3300025972	Switchgrass Rhizosphere	KAKRYVFRLTEKPFRHLKPGRYLVQVRVGTSRTALGPAASRQLTIRKARSNSAR
Ga0207658_108002561	3300025986	Switchgrass Rhizosphere	VYRKAPNAKRYVFRLTEKPFRHLKPGRYLIQVRVGTSRTALGPAASRQLTIRKAGSHTAR
Ga0207677_116981921	3300026023	Miscanthus Rhizosphere	QKPSSVHVATVYRKTTKAKRYVFRLTEKPFRHLKPGRYLVQVRVGASRTALGPAASRQITIRKARSHTAR
Ga0207677_118096431	3300026023	Miscanthus Rhizosphere	KRYVFRLTEKPFRHLKPGRYLVSVRVGSSRTALGPATTREIRVEAARSHTAR
Ga0207677_123092911	3300026023	Miscanthus Rhizosphere	RPFRHLRAGRYLIQVRVGTSRTALGPAASRQITIRRGRESSAR
Ga0207639_100817951	3300026041	Corn Rhizosphere	AKSTVKPRKASSRVHVATVYRKAPNAKRYVFRLTEKPFRHLKPGRYLIQVRVGTSRTALGPAASRQLTIRKAGSHTAR
Ga0207708_101160873	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	RHLKPGRYLVSVRTGASRATLGPAVTREITVKRTRTKIAR
Ga0207708_109430581	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	TSKARTVPSSVHIATVYRKAPKAKRYVFRLTEKPFRHLKPGRYLVQVRVGPSRTALGPAASRQLTIRKARSHTAR
Ga0207648_110124001	3300026089	Miscanthus Rhizosphere	TVYRRTPKAKRYVFRLTEKPFRHLKPGRYLIQVRVGTSRTALGPAASRQLTIRKAGSHTA
Ga0207648_114183081	3300026089	Miscanthus Rhizosphere	SVIKRTSKARQKPSTVHVATVYRKAPKAKRYVFRLTEKPFRHLKPGRYLVQVRVGASRTALGPAASRQVTIRKARSKSAR
Ga0207648_122030641	3300026089	Miscanthus Rhizosphere	YRKAPKAKRYVFRLTEKPFRHLKPGRYLVQVRVGTSRTALGPAASRQVTIRKARSNSAR
Ga0207675_1002041753	3300026118	Switchgrass Rhizosphere	RLTDKRFRHLKPGRYLVQVRVGPSRAALGPAVTREITVRRAPSKIAR
Ga0207675_1017596211	3300026118	Switchgrass Rhizosphere	KRYVFRLTEKPFRHLKPGTYLIQVRVGRSRTTLGPATSRQITIRRGGTKTAR
Ga0207675_1024629461	3300026118	Switchgrass Rhizosphere	PGRYLVQVRVGASRTALGPAASRQVTIRKARSKSAR
Ga0207683_102516315	3300026121	Miscanthus Rhizosphere	KAKRYVFRLTERPFRHLKPGRYLIQVRVGTSPTALGPPASRQITIRRARSARAR
Ga0207698_107475121	3300026142	Corn Rhizosphere	AKRYVFRLTEKPFRHLKPGRYLVQVRVGTSRTALGPAASRQLTIRKARSNSAR
Ga0247828_103097091	3300028587	Soil	HIATVYRRTPKAKRYVFRLTERPFRHLEPGRYLIQVRVGTSRTALGPAASRQITIRRGRSASAR
Ga0247820_110359742	3300028597	Soil	LRPGRYLIQVRVGTSPTALGPAASRQITIRRGRSSSAR
Ga0247825_106712581	3300028812	Soil	DQVPARQKPSSVHVATVYRKAPKAKRYVFRLTEKPFRHLKPGRYLVQVRVGTSRTALGPAASRQLTIRKARSNSAR
Ga0247826_100369653	3300030336	Soil	SKARQRPSSVHIATVYRKAPKAKRYVFRLTEKPFRHLQPGRYLVQVRVGASRTALGPAASRQLTIRKARSHSAR
Ga0307499_102548652	3300031184	Soil	KPFRHLKPGRYLVSVRVGPSRTALGPATTREIQVKAARSHTAR
Ga0307470_103170472	3300032174	Hardwood Forest Soil	SVVKRTSKARTTPSSVHIATVYRKTTKAKRYVFRLTEKPFRHLKPGRYLVQVRVGPSRTALGPAASRQLTIRKARSHTAR
Ga0247830_102967692	3300033551	Soil	LFSLNTLDKRTSVGAKRSMRHVATVFRKTTSAKRYVFRLTDKRFRHLKPGRYLVQVRVGPSRAALGPAVTREITVRRAPSKIAR
Ga0247830_110699881	3300033551	Soil	HLRPGRYLIQVRVGTSPTALGPAASRQITIRRGRSSSAR
Ga0372943_0246288_3_161	3300034268	Soil	KRYVFRLTEKPFRHLKSGSYLVQVRVGRSRTALGPATSRQIRLTAARSTTAR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101754

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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